Citrus Sinensis ID: 036362

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
Protein Sequence
MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP
Secondary Structure (PSIPRED)
cccEEEEccccccccEEEEEEEEcccccEEEEEEEccccccccccHHHHHHHHHHHcccccccEEEccccEEEEEEEEccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHcccccHHHHHHHHHcccccccccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHEEEEcccccEEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHcccccEEEEEccccEEEEEEEccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccEEccccccccEHEEHHHccccEEEHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHcccccccccccccccHHHccccccHHHHHHHHHHccccHHHcccHHHHcccHHHccccccc
Coil and Loop (DISEMBL)
MEKYRKVELigrgkygsfykceeDVAENAYQTVLLkadiipdgvpisiltkisplkemdyplifrkeNDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYhsnrclhgrlnpyqaliNLSDYTVKIARLISVGCIFAEMviqeplsedasesRERISIFRlmgepseetlpgvttffpfiycyeesepkdlaillpdlepAGVDLLQKMLrvnpkeritvndalnhhyyrdvvsvp
Flexible Loop (DISEMBL)
mekyrkveligrgkygsfYKCEEDVAENAYQTVLLkadiipdgvpiSILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIqeplsedasesRERISIFRlmgepseetlpGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKEritvndalnhhyyrdvvsvp
Low Complexity Region (SEG)
MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP
Disordered region (IsUnstruct)
******VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQ***************IFRL*******TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV***
Disordered Region (DISOPRED)
MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV*
Disordered Region (DISEMBL)
MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEP********RERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP
Disordered Region (DISPRO)
*EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	246	2.2.26 [Sep-21-2011]
P93101	294	Cell division control pro	N/A	no	0.995	0.833	0.352	8e-39
Q38772	294	Cell division control pro	N/A	no	0.995	0.833	0.352	9e-39
P23111	294	Cell division control pro	N/A	no	0.979	0.819	0.340	2e-36
Q05006	294	Cell division control pro	N/A	no	0.995	0.833	0.345	2e-36
P29618	294	Cyclin-dependent kinase A	yes	no	0.979	0.819	0.336	2e-36
Q41639	294	Cell division control pro	N/A	no	0.995	0.833	0.338	6e-36
P24923	291	Cell division control pro	N/A	no	0.971	0.821	0.339	5e-35
P29619	292	Cyclin-dependent kinase A	no	no	0.979	0.825	0.337	3e-34
P24100	294	Cyclin-dependent kinase A	yes	no	0.995	0.833	0.325	4e-34
P52389	294	Cell division control pro	N/A	no	0.995	0.833	0.335	5e-33

>sp|P93101|CDC2_CHERU Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1

 Score =  160 bits (405), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  D   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSCPDFAKDPRMIKRFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRQTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q+PL    SE  E   IFR +G P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRTLGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDL+ ++P+L+PAG+DLL KML ++P +RIT  +AL H Y++D+  VP
Sbjct: 240 SFPKWISKDLSAVVPNLDPAGIDLLNKMLCLDPSKRITARNALEHEYFKDIGFVP 294

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.
Chenopodium rubrum (taxid: 3560)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|Q38772|CDC2A_ANTMA Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2

 Score =  160 bits (405), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSCPEFSQDPRLVKMFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   K+LA ++P+L+ +G+DLL KMLR++P +RIT  +AL H Y++D+  VP
Sbjct: 240 AFPKWPAKELAAVVPNLDASGLDLLDKMLRLDPSKRITARNALQHEYFKDIGFVP 294

Plays a key role in the control of the eukaryotic cell cycle.

Antirrhinum majus (taxid: 4151)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P23111|CDC2_MAIZE Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1

 Score =  152 bits (385), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 50/291 (17%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  +           ++ +   +GVP + + +IS LKEM++
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R  +    +K +Y +FEY  L +L+K + +  +   NP   K     IL  ++Y H
Sbjct: 61  GNIVRLHDVVHSEKRIYLVFEYLDL-DLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGAR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q+PL    SE  E   IFR++G P+E++ PGV+    F  
Sbjct: 180 QYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKT 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            +   + +DLA ++P+L+PAG+DLL KMLR  P +RIT   AL H Y++D+
Sbjct: 240 AFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDL 290

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q05006|CDC22_MEDSA Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1

 Score =  152 bits (385), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 144/295 (48%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  +           ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   + +  K     IL  ++Y H
Sbjct: 61  RNIVRLQDVVHSEKRLYLVFEYLDL-DLKKFMDSSPEFAKDQRQIKMFLYQILCGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+ S   VK+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEM+ Q PL    SE  E   IFR+ G P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDLA  +P+LEPAG+DLL    R++P  RIT   AL H Y++D+  VP
Sbjct: 240 AFPKWPAKDLATQVPNLEPAGLDLLSSTCRLDPTRRITARGALEHEYFKDIKFVP 294

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|P29618|CDKA1_ORYSJ Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1

 Score =  152 bits (384), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 50/291 (17%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y K E IG G YG  Y+  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMHH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R  +    +K +Y +FEY  L +L+K + +  +   NP   K     ILR ++Y H
Sbjct: 61  GNIVRLHDVIHSEKRIYLVFEYLDL-DLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q+PL    SE  E   IFR++G P+E++ PGV++   +  
Sbjct: 180 QYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            + + + +DLA ++P L+PAG+DLL KMLR  P +RIT   AL H Y++D+
Sbjct: 240 AFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDL 290

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q41639|CDC2_VIGAC Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1

 Score =  150 bits (380), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  + + +P+  K     IL  ++Y H
Sbjct: 61  RNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+    ++K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV + PL    SE  E   IFR++G P+EET PGVT    F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEETWPGVTALPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +  PKDLA ++P+L+ AG++LL  ML ++P +RIT   A+ H Y++D+  VP
Sbjct: 240 TFPKWPPKDLATVVPNLDAAGLNLLSSMLCLDPSKRITARIAVEHEYFKDIKFVP 294

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Vigna aconitifolia (taxid: 3918)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P24923|CDC21_MEDSA Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1

 Score =  147 bits (372), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 145/289 (50%), Gaps = 50/289 (17%)

Query: 7   VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK 66
           VE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +  I R 
Sbjct: 4   VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRL 63

Query: 67  EN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKI-----LRVLSYYHSNRCLH 117
           ++    DK +Y +FEY  L +L+K + +  + I +P+  K+     L  ++Y HS+R LH
Sbjct: 64  QDVVHSDKRLYLVFEYLDL-DLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLH 122

Query: 118 GRLNPYQALINLSDYTVKIAR--------------------------------------- 138
             L P   LI+    ++K+A                                        
Sbjct: 123 RDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPV 182

Query: 139 -LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE 197
            + SVGCIFAEM  + PLS   SE  E   IFR++G P+E+T PGVT+   F   +    
Sbjct: 183 DVWSVGCIFAEMANRRPLSPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWP 242

Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            KDLA ++P+LEPAG+DLL  ML ++P +RIT   A+ H Y++D+  VP
Sbjct: 243 SKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYFKDIKFVP 291

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P29619|CDKA2_ORYSJ Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1

 Score =  145 bits (366), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 49/290 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK +            ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHS 112
             I R ++    +K +Y +FEY  L +L+K + +  D  N+        +ILR ++Y HS
Sbjct: 61  RNIVRLQDVVHKEKCIYLVFEYLDL-DLKKHMDSSPDFKNHRIVKSFLYQILRGIAYCHS 119

Query: 113 NRCLHGRLNPYQALINLSDYTVKIAR---------------------------------- 138
           +R LH  L P   LI+    ++K+A                                   
Sbjct: 120 HRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARH 179

Query: 139 ------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                 + SVGCIFAEMV Q+PL    SE  E   IF +MG P+EET PGV +   +I  
Sbjct: 180 YSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFSIMGTPNEETWPGVASLPDYIST 239

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           + +    DLA ++P L+ +G+DLL KMLR++P +RI    AL H Y++D+
Sbjct: 240 FPKWPSVDLATVVPTLDSSGLDLLSKMLRLDPSKRINARAALEHEYFKDL 289

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P24100|CDKA1_ARATH Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1

 Score =  145 bits (365), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 146/295 (49%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I + ++    +K +Y +FEY  L +L+K + +  D   +    K     ILR ++Y H
Sbjct: 61  SNIVKLQDVVHSEKRLYLVFEYLDL-DLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+    ++K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSH 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEM+ Q+PL    SE  +   IFR+MG P E+T  GVT+   +  
Sbjct: 180 HYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGVTSLPDYKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + + +P DL   +P+L+P GVDLL KML ++P +RI    AL H Y++D+  +P
Sbjct: 240 AFPKWKPTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAALEHEYFKDLGGMP 294

Involved in the control of the cell cycle. Essential for both G1/S and G2/M (mitosis) phase transitions. Functions in cell morphogenesis as well as cell proliferation. Required for cell division (entry into mitosis) of the generative cell in male gametogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P52389|CDC2_VIGUN Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 151/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V +       ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRVTDETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  + + +P+  K     IL  ++Y H
Sbjct: 61  RNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+    ++K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGC+FAEMV + PL    SE  E   IFR++G P+EET PGVT    F  
Sbjct: 180 HYSTPVDVWSVGCLFAEMVNRRPLFPGDSEIDELFKIFRILGTPNEETWPGVTALPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +  PKDLA ++P+L+ AG++LL  ML ++P +RIT   A+ H Y++D+  VP
Sbjct: 240 TFPKWPPKDLATMVPNLDAAGLNLLSSMLSLDPSKRITARIAVEHEYFKDIKFVP 294

Plays a key role in the control of the eukaryotic cell cycle. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.

Vigna unguiculata (taxid: 3917)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
326422262	294	A-type cyclin dependent kinase 1 [Dendro	0.995	0.833	0.359	7e-39
302753412	308	hypothetical protein SELMODRAFT_139306 [	0.991	0.792	0.363	3e-38
9885803	294	cyclin-dependent kinase A:4 [Nicotiana t	0.995	0.833	0.355	6e-38
849068	294	cdc2 homolog [Nicotiana tabacum]	0.995	0.833	0.355	7e-38
25989351	294	cyclin-dependent kinase [Helianthus tube	0.995	0.833	0.362	9e-38
449465537	294	PREDICTED: cell division control protein	0.995	0.833	0.355	2e-37
17224978	294	cyclin dependent kinase [Helianthus annu	0.995	0.833	0.359	2e-37
24636265	294	RecName: Full=Cell division control prot	0.995	0.833	0.352	5e-37
1321672	302	cyclin-dependent kinase [Antirrhinum maj	0.995	0.811	0.352	5e-37
5921443	294	RecName: Full=Cell division control prot	0.995	0.833	0.352	5e-37

>gi|326422262|gb|ADZ74120.1| A-type cyclin dependent kinase 1 [Dendrobium candidum]

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 151/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++Y KVE IG G YG  YK  + +         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDKLTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  D   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSEKRIYLVFEYLDL-DLKKHMDSCPDFAKDPRLTKSYLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGAR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR++G P+EET PGV++   F  
Sbjct: 180 QYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRILGTPTEETWPGVSSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDLA ++P+LEPAGVDLL KMLR+ P +RIT   AL H Y++D+  VP
Sbjct: 240 AFPKWPSKDLATVVPNLEPAGVDLLSKMLRLEPSKRITARQALQHEYFKDLGVVP 294

Source: Dendrobium candidum

Species: Dendrobium candidum

Genus: Dendrobium

Family: Orchidaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302753412|ref|XP_002960130.1| hypothetical protein SELMODRAFT_139306 [Selaginella moellendorffii] gi|302804516|ref|XP_002984010.1| hypothetical protein SELMODRAFT_271676 [Selaginella moellendorffii] gi|300148362|gb|EFJ15022.1| hypothetical protein SELMODRAFT_271676 [Selaginella moellendorffii] gi|300171069|gb|EFJ37669.1| hypothetical protein SELMODRAFT_139306 [Selaginella moellendorffii]

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 147/294 (50%), Gaps = 50/294 (17%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + +         ++ D   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRITNETIALKKIRLDQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + N  D   +P+  K     ++R L+Y H
Sbjct: 61  GNIVRLQDVVHCEKKLYLVFEYLDL-DLKKHMDNSPDFAKSPRMIKTFLYQMIRGLAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEM+ Q PL    SE  E   IFR++G P+EET PGVT+   F  
Sbjct: 180 HYSTPVDMWSVGCIFAEMINQRPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV 245
            + +  PKDLA L+P LE AGVDLL KML ++P  RIT   AL H Y++D  S 
Sbjct: 240 AFPKWLPKDLATLVPGLEHAGVDLLSKMLCLDPSSRITARAALEHDYFKDAASA 293

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9885803|gb|AAG01534.1|AF289467_1 cyclin-dependent kinase A:4 [Nicotiana tabacum]

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  ANIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPEFSKDPRLVKMFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+E+T PGVTT   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVTQRPLFPGDSEIDELFKIFRVMGTPNEDTWPGVTTLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDLA ++P+L+ AG+DLL KMLR++P +RIT  +AL H Y++D+  VP
Sbjct: 240 AFPKWPSKDLATIVPNLDGAGLDLLDKMLRLDPSKRITARNALEHEYFKDIGYVP 294

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|849068|dbj|BAA09369.1| cdc2 homolog [Nicotiana tabacum]

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  ANIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPEFSEDPRLVKMFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+E+T PGVTT   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVTQRPLFPGDSEIDELFKIFRVMGTPNEDTWPGVTTLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDLA ++P+L+ AG+DLL KMLR++P +RIT  +AL H Y++D+  VP
Sbjct: 240 AFPKWPSKDLATIVPNLDGAGLDLLDKMLRLDPSKRITARNALEHEYFKDIGYVP 294

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|25989351|gb|AAL47481.1| cyclin-dependent kinase [Helianthus tuberosus]

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 150/295 (50%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    DK +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSDKRLYLVFEYLDL-DLKKHMDSCPEFSKDPRLVKTFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDLA ++P+LE AG+DLL KML ++P +RIT   AL H Y++D+  VP
Sbjct: 240 AFPKWSSKDLATVVPNLEKAGLDLLCKMLWLDPSKRITARTALEHEYFKDIGFVP 294

Source: Helianthus tuberosus

Species: Helianthus tuberosus

Genus: Helianthus

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465537|ref|XP_004150484.1| PREDICTED: cell division control protein 2 homolog A-like [Cucumis sativus]

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPEFSKDPRQVKMFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR++G P+E+T PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +  PKDLA ++P+LE AG+DLL KML ++P +R+T  +AL H Y++DV  VP
Sbjct: 240 TFPKWSPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARNALEHEYFKDVGFVP 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17224978|gb|AAL37195.1|AF321361_1 cyclin dependent kinase [Helianthus annuus]

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 150/295 (50%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    DK +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSDKRLYLVFEYLDL-DLKKHMDSCPEFSKDPRLVKTFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDLA ++P+LE  G+DLL+KML ++P +RIT   AL H Y++D+  VP
Sbjct: 240 AFPKWSSKDLATVVPNLEKTGLDLLRKMLCLDPSKRITARTALEHEYFKDIGFVP 294

Source: Helianthus annuus

Species: Helianthus annuus

Genus: Helianthus

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|24636265|sp|P93101.1|CDC2_CHERU RecName: Full=Cell division control protein 2 homolog; AltName: Full=p34cdc2 gi|1770186|emb|CAA71242.1| cyclin dependent kinase p34 [Chenopodium rubrum]

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  D   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSCPDFAKDPRMIKRFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRQTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q+PL    SE  E   IFR +G P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRTLGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   KDL+ ++P+L+PAG+DLL KML ++P +RIT  +AL H Y++D+  VP
Sbjct: 240 SFPKWISKDLSAVVPNLDPAGIDLLNKMLCLDPSKRITARNALEHEYFKDIGFVP 294

Source: Chenopodium rubrum

Species: Oxybasis rubra

Genus: Oxybasis

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1321672|emb|CAA66233.1| cyclin-dependent kinase [Antirrhinum majus]

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 9   MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 68

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 69  GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSCPEFSQDPRLVKMFLYQILRGIAYCH 127

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 128 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 187

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+EET PGVT+   F  
Sbjct: 188 HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETWPGVTSLPDFKS 247

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   K+LA ++P+L+ +G+DLL KMLR++P +RIT  +AL H Y++D+  VP
Sbjct: 248 AFPKWPAKELAAVVPNLDASGLDLLDKMLRLDPSKRITARNALQHEYFKDIGFVP 302

Source: Antirrhinum majus

Species: Antirrhinum majus

Genus: Antirrhinum

Family: Plantaginaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5921443|sp|Q38772.2|CDC2A_ANTMA RecName: Full=Cell division control protein 2 homolog A

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 50/295 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME+Y KVE IG G YG  YK  + V         ++ +   +GVP + + +IS LKEM +
Sbjct: 1   MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
             I R ++    +K +Y +FEY  L +L+K + +  +   +P+  K     ILR ++Y H
Sbjct: 61  GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSCPEFSQDPRLVKMFLYQILRGIAYCH 119

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S+R LH  L P   LI+     +K+A                                  
Sbjct: 120 SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSR 179

Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                  + SVGCIFAEMV Q PL    SE  E   IFR+MG P+EET PGVT+   F  
Sbjct: 180 HYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETWPGVTSLPDFKS 239

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
            + +   K+LA ++P+L+ +G+DLL KMLR++P +RIT  +AL H Y++D+  VP
Sbjct: 240 AFPKWPAKELAAVVPNLDASGLDLLDKMLRLDPSKRITARNALQHEYFKDIGFVP 294

Source: Antirrhinum majus

Species: Antirrhinum majus

Genus: Antirrhinum

Family: Plantaginaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
UNIPROTKB|P29618	294	CDKA-1 "Cyclin-dependent kinas	0.491	0.411	0.426	9.4e-40
TAIR|locus:2099478	294	CDC2 "cell division control 2"	0.495	0.414	0.406	1.2e-37
UNIPROTKB|Q00526	305	CDK3 "Cyclin-dependent kinase	0.467	0.377	0.396	2.3e-31
TAIR|locus:2064087	311	CDKB1;2 "cyclin-dependent kina	0.463	0.366	0.405	5.6e-31
TAIR|locus:2037410	315	CDKB2;2 "cyclin-dependent kina	0.475	0.371	0.369	8.6e-30
UNIPROTKB|E2RPT8	304	CDK3 "Uncharacterized protein"	0.430	0.348	0.405	6.4e-29
GENEDB_PFALCIPARUM|MAL13P1.279	288	PfPK5 "P. falciparum Protein K	0.467	0.399	0.379	7.6e-29
UNIPROTKB|P61075	288	CRK2 "Cell division control pr	0.467	0.399	0.379	7.6e-29
TAIR|locus:2011761	313	CDKB2;1 "cyclin-dependent kina	0.475	0.373	0.378	9.6e-29
TAIR|locus:2080290	309	CDKB1;1 "cyclin-dependent kina	0.520	0.414	0.431	1.6e-28

UNIPROTKB|P29618 CDKA-1 "Cyclin-dependent kinase A-1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 256 (95.2 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
 Identities = 52/122 (42%), Positives = 78/122 (63%)

Query:   124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
             + L+    Y+  +  + SVGCIFAEMV Q+PL    SE  E   IFR++G P+E++ PGV
Sbjct:   173 EILLGSRQYSTPVD-MWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGV 231

Query:   184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
             ++   +   + + + +DLA ++P L+PAG+DLL KMLR  P +RIT   AL H Y++D+ 
Sbjct:   232 SSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDLE 291

Query:   244 SV 245
              V
Sbjct:   292 MV 293

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2099478 CDC2 "cell division control 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
 Identities = 50/123 (40%), Positives = 75/123 (60%)

Query:   124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
             + L+    Y+  +  + SVGCIFAEM+ Q+PL    SE  +   IFR+MG P E+T  GV
Sbjct:   173 EILLGSHHYSTPVD-IWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGV 231

Query:   184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
             T+   +   + + +P DL   +P+L+P GVDLL KML ++P +RI    AL H Y++D+ 
Sbjct:   232 TSLPDYKSAFPKWKPTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAALEHEYFKDLG 291

Query:   244 SVP 246
              +P
Sbjct:   292 GMP 294

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS;IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0042023 "DNA endoreduplication" evidence=RCA;IMP

GO:0009555 "pollen development" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0048229 "gametophyte development" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=IGI

GO:0000910 "cytokinesis" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0009574 "preprophase band" evidence=TAS

GO:0010005 "cortical microtubule, transverse to long axis" evidence=IDA

UNIPROTKB|Q00526 CDK3 "Cyclin-dependent kinase 3" [Homo sapiens (taxid:9606)]

 Score = 209 (78.6 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 46/116 (39%), Positives = 69/116 (59%)

Query:   124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
             + L+    YT  +  + S+GCIFAEMV ++ L    SE  +   IFR++G PSE+T PGV
Sbjct:   172 EILLGSKFYTTAVD-IWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGV 230

Query:   184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             T    +   + +   K L  ++P+LEP G DLL ++L+ +P +RIT   AL H Y+
Sbjct:   231 TQLPDYKGSFPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAKTALAHPYF 286

GO:0005524 "ATP binding" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0045023 "G0 to G1 transition" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

TAIR|locus:2064087 CDKB1;2 "cyclin-dependent kinase B1;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.6e-31, Sum P(3) = 5.6e-31
 Identities = 47/116 (40%), Positives = 74/116 (63%)

Query:   124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
             + L+  + Y+  +  + SVGCIFAEM+ ++ L    SE ++ + IFRL+G P+E+  PGV
Sbjct:   190 EVLLGSTHYSTAVD-IWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGV 248

Query:   184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                  + + Y + EP+DL+  +P L P G+DLL +ML+ NP ERI+   AL+H Y+
Sbjct:   249 MALRDW-HVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYF 303

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=TAS

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=ISS

GO:0030332 "cyclin binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2037410 CDKB2;2 "cyclin-dependent kinase B2;2" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 44/119 (36%), Positives = 74/119 (62%)

Query:   124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
             + L+  + Y+  +  + SVGCIFAE+V ++ +    SE ++ + IFRL+G P+EE  PGV
Sbjct:   193 EVLLGATHYSTGVD-MWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGTPNEEVWPGV 251

Query:   184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
             +    + + Y + +P  L+  +P+L+ AG+DLL KML   P +RI+   A+ H Y+ D+
Sbjct:   252 SKLKDW-HEYPQWKPLSLSTAVPNLDEAGLDLLSKMLEYEPAKRISAKKAMEHPYFDDL 309

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=TAS

GO:0007346 "regulation of mitotic cell cycle" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009755 "hormone-mediated signaling pathway" evidence=IEP;IMP

GO:0009934 "regulation of meristem structural organization" evidence=IMP

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA;IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

UNIPROTKB|E2RPT8 CDK3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 195 (73.7 bits), Expect = 6.4e-29, Sum P(2) = 6.4e-29
 Identities = 43/106 (40%), Positives = 60/106 (56%)

Query:   141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD 200
             S+GCIFAEMV +  L    SE  +   IFR +G PSE T PGVT    +   + +   K 
Sbjct:   187 SIGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPSEATWPGVTQLPDYKGSFPKWTRKG 246

Query:   201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
             L  ++P LEP G DLL ++L+ +P +RI+   AL H Y+    + P
Sbjct:   247 LEEIVPSLEPEGKDLLMQLLQYDPSQRISAKAALVHPYFSSAETSP 292

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GENEDB_PFALCIPARUM|MAL13P1.279 PfPK5 "P. falciparum Protein Kinase 5" [Plasmodium falciparum (taxid:5833)]

 Score = 198 (74.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 44/116 (37%), Positives = 66/116 (56%)

Query:   126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
             L+    Y+  I  + SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT 
Sbjct:   172 LMGSKKYSTTID-IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230

Query:   186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
                +   +   EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++
Sbjct:   231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0007049 "cell cycle" evidence=ISS

UNIPROTKB|P61075 CRK2 "Cell division control protein 2 homolog" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 198 (74.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 44/116 (37%), Positives = 66/116 (56%)

Query:   126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
             L+    Y+  I  + SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT 
Sbjct:   172 LMGSKKYSTTID-IWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230

Query:   186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
                +   +   EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++
Sbjct:   231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0007049 "cell cycle" evidence=ISS

TAIR|locus:2011761 CDKB2;1 "cyclin-dependent kinase B2;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
 Identities = 45/119 (37%), Positives = 75/119 (63%)

Query:   124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
             + L+  + Y+  +  + SVGCIFAE+V  + + +  SE ++ + IF+L G P+EE  PGV
Sbjct:   191 EVLLGATHYSTAVD-MWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMWPGV 249

Query:   184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
             +T   + + Y + +P  L+  +P+L+ AGVDLL KML+  P +RI+   A+ H Y+ D+
Sbjct:   250 STLKNW-HEYPQWKPSTLSSAVPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDL 307

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000307 "cyclin-dependent protein kinase holoenzyme complex" evidence=IDA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0016572 "histone phosphorylation" evidence=RCA;IDA

GO:0009755 "hormone-mediated signaling pathway" evidence=IEP;IMP

GO:0009934 "regulation of meristem structural organization" evidence=IMP

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA;IMP

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0010440 "stomatal lineage progression" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0042023 "DNA endoreduplication" evidence=RCA

GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2080290 CDKB1;1 "cyclin-dependent kinase B1;1" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
 Identities = 57/132 (43%), Positives = 82/132 (62%)

Query:   108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
             SY H    L  R  P + L+  + Y+  +  + SVGCIFAEMV ++ L    SE ++ + 
Sbjct:   174 SYTHEIVTLWYRA-P-EVLLGSTHYSTGVD-MWSVGCIFAEMVRRQALFPGDSEFQQLLH 230

Query:   168 IFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKER 227
             IFRL+G P+E+  PGV+T   + + Y + EP+DL + +P L P GVDLL KML+ NP ER
Sbjct:   231 IFRLLGTPTEQQWPGVSTLRDW-HVYPKWEPQDLTLAVPSLSPQGVDLLTKMLKYNPAER 289

Query:   228 ITVNDALNHHYY 239
             I+   AL+H Y+
Sbjct:   290 ISAKTALDHPYF 301

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0048825 "cotyledon development" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0010376 "stomatal complex formation" evidence=IEP;TAS

GO:0042023 "DNA endoreduplication" evidence=TAS

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P24100	CDKA1_ARATH	2, ., 7, ., 1, 1, ., 2, 3	0.3254	0.9959	0.8333	yes	no
P61075	CDC2H_PLAF7	2, ., 7, ., 1, 1, ., 2, 3	0.3003	0.9512	0.8125	yes	no
P29618	CDKA1_ORYSJ	2, ., 7, ., 1, 1, ., 2, 3	0.3367	0.9796	0.8197	yes	no
O96821	CDC2H_PLAKH	2, ., 7, ., 1, 1, ., 2, 3	0.3037	0.9512	0.8125	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	246
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-52
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-46
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-40
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-35
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-33
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-31
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-30
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-30
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	8e-29
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-27
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-26
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-25
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-24
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-23
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-23
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	6e-23
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-21
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-20
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-20
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-19
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-19
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-16
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	7e-16
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-15
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-15
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-14
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-14
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	8e-14
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-13
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-13
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-13
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-13
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-12
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-12
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-12
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-12
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-12
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-11
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-11
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	6e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-10
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-10
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-10
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-10
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	8e-10
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	5e-09
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-09
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-08
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-07
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-07
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-06
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	3e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-06
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-05
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	4e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-05
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	0.003

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  171 bits (434), Expect = 2e-52
 Identities = 111/298 (37%), Positives = 155/298 (52%), Gaps = 56/298 (18%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKE 57
           M++Y KVE IG G YG  YK  + V     +T+ LK    +   +GVP + + +IS LKE
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTN---ETIALKKIRLEQEDEGVPSTAIREISLLKE 57

Query: 58  MDYPLIFRKE----NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLS 108
           M +  I R +    ++K +Y +FEY  L +L+K + +  D   NP+  K     ILR ++
Sbjct: 58  MQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIA 116

Query: 109 YYHSNRCLHGRLNPYQALINLSDYTVKIAR------------------------------ 138
           Y HS+R LH  L P   LI+     +K+A                               
Sbjct: 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILL 176

Query: 139 ----------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + SVGCIFAEMV Q+PL    SE  E   IFR++G P+EET PGVT+   
Sbjct: 177 GSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236

Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
           +   + +  PKDLA ++P LEPAGVDLL KMLR++P +RIT   AL H Y++D+   P
Sbjct: 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDAP 294

Length = 294

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  154 bits (391), Expect = 6e-46
 Identities = 96/287 (33%), Positives = 140/287 (48%), Gaps = 58/287 (20%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDY 60
           Y K+E +G G YG  YK   D      + V LK    D   +G+P + L +IS LKE+ +
Sbjct: 1   YEKLEKLGEGTYGVVYKAR-DKKTG--EIVALKKIRLDNEEEGIPSTALREISLLKELKH 57

Query: 61  PLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
           P I +  +    ++ +Y +FEY  + +L+K +      ++ P   K     +LR L+Y H
Sbjct: 58  PNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLS-PNLIKSIMYQLLRGLAYCH 115

Query: 112 SNRCLHGRLNPYQALINLSDYTVKI-----ARLI-------------------------- 140
           S+R LH  L P   LIN  D  +K+     AR                            
Sbjct: 116 SHRILHRDLKPQNILIN-RDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSK 174

Query: 141 ---------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                    SVGCIFAEM+  +PL    SE  +   IF+++G P+EE+ PGVT    +  
Sbjct: 175 HYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
            + +  PKDL  +LP L+P G+DLL KML+ NP +RI+  +AL H Y
Sbjct: 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  139 bits (353), Expect = 2e-40
 Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 55/287 (19%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDY 60
           Y+KVE IG G YG  YK   D      + V LK    +   +GVP + + +IS LKE+++
Sbjct: 1   YQKVEKIGEGTYGVVYKAR-DKLTG--EIVALKKIRLETEDEGVPSTAIREISLLKELNH 57

Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
           P I R  +    +  +Y +FE+  L +L+K + +      +P   K     +L+ ++Y H
Sbjct: 58  PNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH 116

Query: 112 SNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI------------ 140
           S+R LH  L P   LI+      L+D             YT ++  L             
Sbjct: 117 SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQ 176

Query: 141 --------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                   S+GCIFAEMV + PL    SE  +   IFR +G P E+  PGVT+   +   
Sbjct: 177 YSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT 236

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           + +   +DL+ ++P+L+  G+DLL KML  +P +RI+   AL H Y+
Sbjct: 237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  126 bits (319), Expect = 3e-35
 Identities = 85/291 (29%), Positives = 132/291 (45%), Gaps = 63/291 (21%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDY 60
           ++KVE IG G YG  YK    +     + V LK    D   +GVP + + +IS LKE+++
Sbjct: 2   FQKVEKIGEGTYGVVYKARNKLTG---EVVALKKIRLDTETEGVPSTAIREISLLKELNH 58

Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIIN---------NPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D                 ++L+ L
Sbjct: 59  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGL 113

Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
           ++ HS+R LH  L P   LIN      L+D             YT ++  L         
Sbjct: 114 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 173

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 174 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233

Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +   + +   +D + ++P L+  G DLL +ML  +P +RI+   AL H ++
Sbjct: 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  121 bits (306), Expect = 3e-33
 Identities = 88/302 (29%), Positives = 133/302 (44%), Gaps = 72/302 (23%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           + Y K+E IG G YG  YK  +       A +   L+ D   +G+P + L +IS L+ + 
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD--EEGIPPTALREISLLQMLS 58

Query: 60  Y-PLIFR---------KENDKLVYQIFEYTGLLNLRKVIKNFLDI----INNPKTAKILR 105
               I R         K     +Y +FEY     L   +K F+D        P  AK ++
Sbjct: 59  ESIYIVRLLDVEHVEEKNGKPSLYLVFEY-----LDSDLKKFMDSNGRGPGRPLPAKTIK 113

Query: 106 VLSYY--------HSNRCLHGRLNPYQALINLSDYTVKIARL------------------ 139
              Y         H +  +H  L P   L++     +KIA L                  
Sbjct: 114 SFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIV 173

Query: 140 ----------------------ISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE 177
                                  SVGCIFAEM  ++PL    SE ++ + IF+L+G P+E
Sbjct: 174 TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233

Query: 178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           +  PGV+    + + + + +P+DL+  +PDL P G+DLLQKMLR +P +RI+   AL H 
Sbjct: 234 QVWPGVSKLRDW-HEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP 292

Query: 238 YY 239
           Y+
Sbjct: 293 YF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  115 bits (290), Expect = 6e-31
 Identities = 85/299 (28%), Positives = 129/299 (43%), Gaps = 75/299 (25%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDY 60
           Y ++  IG G YG+ YK  +    N  + V LK   +P   +G+P+S L +I+ LK+++ 
Sbjct: 1   YEELAEIGEGAYGTVYKARD---LNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES 57

Query: 61  ---PLIFR---------KENDKLVYQIFEY-----TGLLNLRKVIKNFLDIINNPKTAK- 102
              P I R          + +  +  +FE+        L   K  K  L     P+T K 
Sbjct: 58  FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYL--SKCPKPGLP----PETIKD 111

Query: 103 ----ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------RLISV---- 142
               +LR + + HS+R +H  L P   L+  SD  VKIA             L SV    
Sbjct: 112 LMRQLLRGVDFLHSHRIVHRDLKPQNILVT-SDGQVKIADFGLARIYSFEMALTSVVVTL 170

Query: 143 ----------------------GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                                 GCIFAE+  + PL    SE+ +   IF ++G PSEE  
Sbjct: 171 WYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEW 230

Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           P   +       +    P+     +P++   G+DLL+KML  NP +RI+  +AL H Y+
Sbjct: 231 PRNVSLPR--SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  114 bits (287), Expect = 1e-30
 Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 69/294 (23%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           ++++E +G G Y + YK          A + + L A+   +G P + + +IS +KE+ + 
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE---EGTPSTAIREISLMKELKHE 58

Query: 62  LIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAK-----ILRV 106
            I R        +KL+  +FEY     + K +K ++D         P T K     +L+ 
Sbjct: 59  NIVRLHDVIHTENKLML-VFEY-----MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKG 112

Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
           +++ H NR LH  L P   LIN      L+D+   +AR                      
Sbjct: 113 IAFCHENRVLHRDLKPQNLLINKRGELKLADF--GLARAFGIPVNTFSNEVVTLWYRAPD 170

Query: 141 ---------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                          SVGCI AEM+   PL    +   + + IFR+MG P+E T PG++ 
Sbjct: 171 VLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230

Query: 186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
              +   +    P+DL  L P  +P G+DLL ++L++NP+ RI+ +DAL H ++
Sbjct: 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  114 bits (286), Expect = 2e-30
 Identities = 86/293 (29%), Positives = 131/293 (44%), Gaps = 64/293 (21%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMD 59
            Y K+E IG G YG  YK      +   Q V +K    +   +GVP + + +IS LKE+ 
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRN---KKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ 57

Query: 60  YPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYY----- 110
           +P I   ++    +  +Y IFE+     L   +K +LD +   +      V SY      
Sbjct: 58  HPNIVCLQDVLMQESRLYLIFEF-----LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQ 112

Query: 111 -----HSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI------ 140
                HS R LH  L P   LI+      L+D             YT ++  L       
Sbjct: 113 GILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEV 172

Query: 141 --------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF 186
                         S+G IFAEM  ++PL    SE  +   IFR++G P+E+  PGVT+ 
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232

Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             +   + + +   L   + +L+  G+DLL+KML  +P +RI+   ALNH Y+
Sbjct: 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 8e-29
 Identities = 80/287 (27%), Positives = 124/287 (43%), Gaps = 55/287 (19%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI 63
           Y+K+  IG G YG  YK  + +         +K     +G+P + L +I  LKE+++P I
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Query: 64  ------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TAKILRVLSYYHSN 113
                 FR + D  +Y +FE+    +L K+IK+    +          ++L+ L++ HS+
Sbjct: 61  IKLLDVFRHKGD--LYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH 117

Query: 114 RCLHGRLNPYQALINLSDYTVKI-----ARLI---------------------------- 140
             LH  L P   LIN ++  +K+     AR                              
Sbjct: 118 GILHRDLKPENLLIN-TEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGY 176

Query: 141 -------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC- 192
                  SVGCIFAE++ + PL    SE  +   IFR +G P  E  P  T+        
Sbjct: 177 STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS 236

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           + +     L  L P+  P  +DLL +ML  +P +RIT   AL H Y+
Sbjct: 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  105 bits (263), Expect = 4e-27
 Identities = 88/295 (29%), Positives = 129/295 (43%), Gaps = 69/295 (23%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMD 59
           KY K+E IG G YG+ +K +       ++ V LK   + D   GVP S L +I  LKE+ 
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKN---RETHEIVALKRVRLDDDDEGVPSSALREICLLKELK 57

Query: 60  YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIIN---NPKTAK-----ILRVL 107
           +  I R      +DK +  +FEY       + +K + D  N   +P+  K     +L+ L
Sbjct: 58  HKNIVRLYDVLHSDKKLTLVFEYC-----DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGL 112

Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD------------------------------ 131
           ++ HS+  LH  L P   LIN      L+D                              
Sbjct: 113 AFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 172

Query: 132 ----YTVKIARLISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTF 186
               Y+  I  + S GCIFAE+     PL        +   IFRL+G P+EE+ PGV+  
Sbjct: 173 GAKLYSTSI-DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231

Query: 187 --FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             +     Y  +    L  ++P L   G DLLQ +L  NP +RI+  +AL H Y+
Sbjct: 232 PDYKPYPMYPAT--TSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score =  102 bits (255), Expect = 9e-26
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 62/296 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
           ME Y K+E +G G Y + +K    + EN  A + + L+ +   +G P + + ++S LK++
Sbjct: 5   METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKDL 61

Query: 59  DYPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA--------KILRV 106
            +  I    +    DK +  +FEY     L K +K ++D   N  +         +ILR 
Sbjct: 62  KHANIVTLHDIVHTDKSLTLVFEY-----LDKDLKQYMDDCGNIMSMHNVKIFLYQILRG 116

Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
           L+Y H  + LH  L P   LIN      L+D+ +  A+ +                    
Sbjct: 117 LAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVL 176

Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF 187
                         VGCIF EM    PL   ++   E   IFRL+G P+EET PG+++  
Sbjct: 177 LGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236

Query: 188 PFI-YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            F  Y + + +P+ L    P L+  G++LL K L+   K+RI+  +A+ H Y+R +
Sbjct: 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =   99 bits (250), Expect = 4e-25
 Identities = 86/296 (29%), Positives = 125/296 (42%), Gaps = 68/296 (22%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA------DIIPDGVPISILTKISPLK 56
           +Y K + +G G Y   YK   D      + V +K           DG+  + L +I  L+
Sbjct: 1   RYEKGKKLGEGTYAVVYK-ARDKETG--RIVAIKKIKLGERKEAKDGINFTALREIKLLQ 57

Query: 57  EMDYPLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----IL 104
           E+ +P I         K N  LV++  E     +L KVIK+   I+  P   K      L
Sbjct: 58  ELKHPNIIGLLDVFGHKSNINLVFEFMET----DLEKVIKD-KSIVLTPADIKSYMLMTL 112

Query: 105 RVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------------RLI------- 140
           R L Y HSN  LH  L P   LI  SD  +K+A                 +++       
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIA-SDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAP 171

Query: 141 ----------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                           SVGCIFAE++++ P     S+  +   IF  +G P+EE  PGVT
Sbjct: 172 ELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231

Query: 185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
           +  P    ++   P  L  + P      +DLLQ++L +NP +RIT   AL H Y+ 
Sbjct: 232 SL-PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 98.2 bits (244), Expect = 3e-24
 Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 62/296 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
           +E Y K++ +G G Y + YK    + +N  A + + L+ +   +G P + + ++S LK++
Sbjct: 5   LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDL 61

Query: 59  DYPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLD----IIN--NPKT--AKILRV 106
            +  I    +    +K +  +FEY     L K +K +LD     IN  N K    ++LR 
Sbjct: 62  KHANIVTLHDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNSINMHNVKLFLFQLLRG 116

Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
           L+Y H  + LH  L P   LIN      L+D+ +  A+ I                    
Sbjct: 117 LNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDIL 176

Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF 187
                         VGCIF EM    PL   ++   +   IFR++G P+EET PG+ +  
Sbjct: 177 LGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236

Query: 188 PFI-YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            F  Y Y +     L    P L+  G +LL K+L+   ++RI+  +A+ H Y+  +
Sbjct: 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 95.9 bits (239), Expect = 1e-23
 Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 69/298 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
           +E Y+K++ +G G Y + YK    +     A + + L+ +   +G P + + + S LK++
Sbjct: 4   LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE---EGAPFTAIREASLLKDL 60

Query: 59  DYPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAKI-----LRV 106
            +  I    +     K +  +FEY     L   +K ++D           ++     LR 
Sbjct: 61  KHANIVTLHDIIHTKKTLTLVFEY-----LDTDLKQYMDDCGGGLSMHNVRLFLFQLLRG 115

Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
           L+Y H  R LH  L P   LI+      L+D+ +  A+ +                    
Sbjct: 116 LAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVL 175

Query: 141 -------------SVGCIFAEMVIQEPL---SEDASESRERISIFRLMGEPSEETLPGVT 184
                         VGCIF EM    PL   S D  +   +I  FR++G P+EET PGV+
Sbjct: 176 LGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI--FRVLGTPTEETWPGVS 233

Query: 185 TFFPFI-YCYEESEPKDLAILLP--DLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +   F  Y +    P+ L    P  D  P G +L  K L+  PK+RI+  +A+ H Y+
Sbjct: 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 95.9 bits (238), Expect = 2e-23
 Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 62/293 (21%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
           +E Y K++ +G G Y + +K    + EN  A + + L+ +   +G P + + ++S LK +
Sbjct: 4   LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKNL 60

Query: 59  DYPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA--------KILRV 106
            +  I    +    ++ +  +FEY     L   +K +LD   N  +         ++LR 
Sbjct: 61  KHANIVTLHDIIHTERCLTLVFEY-----LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRG 115

Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
           LSY H  + LH  L P   LIN      L+D+ +  A+ +                    
Sbjct: 116 LSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVL 175

Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF 187
                         VGCI  EM    P+   ++   E   IFRL+G P+EET PG+T+  
Sbjct: 176 LGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235

Query: 188 PF-IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            F  Y + +   + L    P L+  G+DLL  +L    K RI+   AL H Y+
Sbjct: 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 94.1 bits (235), Expect = 6e-23
 Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEMDY 60
           Y K+  IG G YG  YK          + V LK    +   +G PI+ + +I  L+++ +
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTG---ELVALKKIRMENEKEGFPITAIREIKLLQKLRH 57

Query: 61  PLIFR------KENDKLVYQIFEY-----TGLLNLRKV------IKNFLDIINNPKTAKI 103
           P I R       +    +Y +FEY     TGLL+  +V      IK +          ++
Sbjct: 58  PNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCY--------MKQL 109

Query: 104 LRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------ 140
           L  L Y HSN  LH  +     LIN +D  +K+     AR                    
Sbjct: 110 LEGLQYLHSNGILHRDIKGSNILIN-NDGVLKLADFGLARPYTKRNSADYTNRVITLWYR 168

Query: 141 ------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG 182
                             SVGCI AE+ + +P+ + ++E  +   IF L G P++E  PG
Sbjct: 169 PPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPG 228

Query: 183 VTTFFPFI-----YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           V+    F        Y+    +    L+    P+ +DLL K+L ++PK+RI+ + AL H 
Sbjct: 229 VSKLPWFENLKPKKPYKRRLREFFKHLID---PSALDLLDKLLTLDPKKRISADQALQHE 285

Query: 238 YY 239
           Y+
Sbjct: 286 YF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 66/294 (22%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEMD 59
           +Y+ +  IG G +G  +K + D      +TV LK      +  G+P   L +I  L+   
Sbjct: 1   RYKILGRIGEGAHGIVFKAK-DRETG--ETVALKKVALRRLEGGIPNQALREIKALQACQ 57

Query: 60  YPLI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVL----SY 109
           +P +      F   +      + EY    +L +V+++    +   +    +R+L    +Y
Sbjct: 58  HPYVVKLLDVFPHGSG--FVLVMEYMPS-DLSEVLRDEERPLPEAQVKSYMRMLLKGVAY 114

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIA-----RLI------------------------ 140
            H+N  +H  L P   LI+ +D  +KIA     RL                         
Sbjct: 115 MHANGIMHRDLKPANLLIS-ADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY 173

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       +VGCIFAE++   PL    ++  +   +FR +G P+EET PG+T+  P
Sbjct: 174 GARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSL-P 232

Query: 189 FIY---CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             Y    + ES+P  L  + PD  P  +DLL+ +L  +P +R++  +AL H Y+
Sbjct: 233 -DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 78/297 (26%), Positives = 123/297 (41%), Gaps = 67/297 (22%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           ++Y K+  I  G YG  Y+  +           LK +   +G PI+ L +I+ L ++ +P
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHP 64

Query: 62  LIFR-KE-----NDKLVYQIFEYTGLLNLRKVIKNFLDIINNP------KT--AKILRVL 107
            I   KE     N   +Y + EY     +   +K+ ++ +  P      K    ++L  +
Sbjct: 65  NIVTVKEVVVGSNLDKIYMVMEY-----VEHDLKSLMETMKQPFLQSEVKCLMLQLLSGV 119

Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
           ++ H N  LH  L     L+N                   L  YT  +  L         
Sbjct: 120 AHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLL 179

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET------LPG 182
                       SVGCIFAE++ ++PL    SE  +   IF+L+G P+E+       LPG
Sbjct: 180 GAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239

Query: 183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                   Y Y +   K  A+ L D    G DLL ++L  +P +RI+  DAL H Y+
Sbjct: 240 AKKKTFTKYPYNQLRKKFPALSLSD---NGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 86.4 bits (214), Expect = 7e-20
 Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD 200
           SVGCIFAE++  +PL    +E  +   IF L+G P+E+  P      P    +   +PKD
Sbjct: 219 SVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKL-PLYTEFTPRKPKD 277

Query: 201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           L  + P+     +DLLQ +L++NP ERI+  +AL H Y+
Sbjct: 278 LKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316

Length = 335

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 85.4 bits (211), Expect = 1e-19
 Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 73/299 (24%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEM- 58
           +Y  V  IG G YG+ YK  +    ++   V LK+  +    DG+P+S + +++ LK + 
Sbjct: 1   QYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLE 57

Query: 59  --DYPLIF---------RKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
             D+P I          R + +  V  +FE+     + + ++ +LD +  P         
Sbjct: 58  AFDHPNIVRLMDVCATSRTDRETKVTLVFEH-----VDQDLRTYLDKVPPPGLPAETIKD 112

Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
              + LR L + H+N  +H  L P   L+  S   VK+A                     
Sbjct: 113 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGQVKLADFGLARIYSCQMALTPVVVTL 171

Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             + SVGCIFAEM  ++PL    SE+ +   IF L+G P E+  
Sbjct: 172 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231

Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           P   T       +    P+ +  ++P++E +G  LL +ML  NP +RI+   AL H ++
Sbjct: 232 PRDVTLPR--GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 84.5 bits (210), Expect = 3e-19
 Identities = 83/314 (26%), Positives = 120/314 (38%), Gaps = 92/314 (29%)

Query: 3   KYRKVELIGRGKYGSFYKCE-----EDVA----ENAYQTVLL-KADIIPDGVPISILTKI 52
           +Y  ++ IG G YG             VA     N +  ++  K           IL +I
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAK----------RILREI 50

Query: 53  SPLKEMDYP------LIFR---KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK- 102
             L+ + +        I R    E+   VY + E     +L KVIK+       P T   
Sbjct: 51  KLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKS-----PQPLTDDH 104

Query: 103 -------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------- 140
                  ILR L Y HS   +H  L P   L+N S+  +KI     AR +          
Sbjct: 105 IQYFLYQILRGLKYLHSANVIHRDLKPSNILVN-SNCDLKICDFGLARGVDPDEDEKGFL 163

Query: 141 ----------------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
                                       SVGCIFAE++ ++PL        +   I  ++
Sbjct: 164 TEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVL 223

Query: 173 GEPSEETLPGVT--TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV 230
           G PSEE L  +T      ++    +   K L+ L P   P  +DLL+KML  +PK+RIT 
Sbjct: 224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITA 283

Query: 231 NDALNHHY---YRD 241
           ++AL H Y     D
Sbjct: 284 DEALAHPYLAQLHD 297

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 77.2 bits (191), Expect = 1e-16
 Identities = 64/227 (28%), Positives = 96/227 (42%), Gaps = 55/227 (24%)

Query: 63  IFRKENDKLVYQIFEY--TGLLNLRKVIK-NFLDIINNPKTA-KILRVLSYYHSNRCLHG 118
           + + ENDK +Y +FEY  T   +L  VI+ N L+ ++      ++L+ L Y HS   +H 
Sbjct: 75  VIKAENDKDIYLVFEYMET---DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHR 131

Query: 119 RLNPYQALINLSDYTVKI-----ARLI--------------------------------- 140
            L P   L+N SD  VK+     AR +                                 
Sbjct: 132 DLKPSNILLN-SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRY 190

Query: 141 -------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--PFIY 191
                  SVGCI  EM++ +PL    S   +   I  ++G PS E +  + + F    + 
Sbjct: 191 TKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLD 250

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  K L  LLP      +DLL+K+L  NP +R+T  +AL H Y
Sbjct: 251 SLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPY 297

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 75.0 bits (185), Expect = 7e-16
 Identities = 76/321 (23%), Positives = 119/321 (37%), Gaps = 104/321 (32%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADII---PDGVPISILTKISPLKEMD 59
           Y  +  +G G +G  YK  +          V LK  ++    DG PI+ L +I  LK++ 
Sbjct: 10  YEILGKLGEGTFGEVYKARQ----IKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 60  YPLIFR------------KENDKLVYQIFEY-----TGLLNLRKV------IKNFLDIIN 96
           +P +              K     VY +  Y     +GLL    V      IK ++    
Sbjct: 66  HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYM---- 121

Query: 97  NPKTAKILRVLSYYHSNRCLH-------------GRL-----------------NPYQAL 126
                ++L  ++Y H N  LH             G L                       
Sbjct: 122 ----LQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGG 177

Query: 127 INLSDYT-VKIAR-------------------LISVGCIFAEMVIQEPLSEDASESRERI 166
                YT + + R                   +  +GC+FAEM  + P+ +  S+  +  
Sbjct: 178 GGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLH 237

Query: 167 SIFRLMGEPSEETLPGVTT--------FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQK 218
            IF+L G P+EET PG  +         F        + P+ L      L P G+DLL K
Sbjct: 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFT-------NYPRTLEERFGKLGPEGLDLLSK 290

Query: 219 MLRVNPKERITVNDALNHHYY 239
           +L ++P +R+T +DAL H Y+
Sbjct: 291 LLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 73.9 bits (182), Expect = 2e-15
 Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 122 PYQA---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
            Y+A   L++L +YT  I  + SVGCIFAEM+ +  L    +   +   I  ++G PSEE
Sbjct: 176 WYRAPELLLSLPEYTTAI-DMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234

Query: 179 TLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
            L  + +     +I      +P   + + P   P  +DLL +ML+ +P+ERITV  AL H
Sbjct: 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294

Query: 237 HY---YRDV 242
            +   Y D 
Sbjct: 295 PFLAQYHDP 303

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 72.7 bits (179), Expect = 4e-15
 Identities = 75/327 (22%), Positives = 111/327 (33%), Gaps = 101/327 (30%)

Query: 3   KYRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIP-DGVPISILTKISPLKEMD 59
           KY     IGRG YG  YK   +       Y     K D     G+  S   +I+ L+E+ 
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 60  YP------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIIN----------NPKTAK- 102
           +        +F +  DK VY +F+Y           +   II            P   K 
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYAE--------HDLWQIIKFHRQAKRVSIPPSMVKS 112

Query: 103 ----ILRVLSYYHSNRCLHGRLNPYQALI---NLSDYTVKI-----ARLI---------- 140
               IL  + Y HSN  LH  L P   L+         VKI     ARL           
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADL 172

Query: 141 ----------------------------SVGCIFAEMVIQEPL---SEDASESR------ 163
                                       ++GCIFAE++  EP+    E   +        
Sbjct: 173 DPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD 232

Query: 164 ERISIFRLMGEPSEETLPGVT-----------TFFPFIYCYEESEPKDLAILLPDLEPAG 212
           +   IF ++G P+E+  P +                       ++  +        +  G
Sbjct: 233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHK---KPDSQG 289

Query: 213 VDLLQKMLRVNPKERITVNDALNHHYY 239
            DLL+K+L  +P +RIT  +AL H Y+
Sbjct: 290 FDLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 40/176 (22%)

Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN--------------------------------- 128
           +ILR L Y HS   +H  L P   LIN                                 
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPE 175

Query: 129 ----LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                  Y V++  + S GCIFAEM+  +PL        +   I  L+G P ++ +  + 
Sbjct: 176 IMLTWQKYDVEV-DIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234

Query: 185 T--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
           +     F+    + EP   +    + +P+ +DLL+KML  +P++RI+  +AL H Y
Sbjct: 235 SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 69.7 bits (170), Expect = 5e-14
 Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 70/299 (23%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
           ++Y  V  IG G YG  +K  +   +N  + V LK        +G+P+S + +++ L+ +
Sbjct: 1   QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 58

Query: 59  ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
                       D   + R + +  +  +FE+     + + +  +LD +  P        
Sbjct: 59  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 113

Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIAR------- 138
               ++LR L + HS+R +H  L P   L      I L+D      Y+ ++A        
Sbjct: 114 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 173

Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             L SVGCIFAEM  ++PL   +S+  +   I  ++G P EE  
Sbjct: 174 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233

Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           P         +  + ++P  +   + D++  G DLL K L  NP +RI+   AL+H Y+
Sbjct: 234 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 69.3 bits (170), Expect = 8e-14
 Identities = 58/181 (32%), Positives = 76/181 (41%), Gaps = 47/181 (25%)

Query: 102 KILRVLSYYHSNRCLHGRLNP-------------------------------------YQ 124
           ++LR L Y HS   LH  L P                                     Y+
Sbjct: 116 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYR 175

Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
           A   L+N S+YT  I  + SVGCIFAE++ ++PL        +   I  L+G PSEE L 
Sbjct: 176 APELLLNCSEYTTAI-DVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234

Query: 182 GVTTFFPFIYCYEESEPK----DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
            +         Y  S P       A L P   P  +DLL+KML  +P +RITV +AL H 
Sbjct: 235 FIRN--EKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292

Query: 238 Y 238
           Y
Sbjct: 293 Y 293

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 56/290 (19%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS---ILTKISPLKEM 58
           EKY K+  IG G YG  +KC         Q V +K  +  +  P+     L +I  LK++
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRN---RETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL 57

Query: 59  DYP----LI--FRKEND-KLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYH 111
            +P    LI  FR++    LV++  ++T L  L K  +   + +      + L+ +++ H
Sbjct: 58  KHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCH 117

Query: 112 SNRCLHGRLNPYQALINLSDYTVKI-----ARLIS------------------------- 141
            + C+H  + P   LI      +K+     AR+++                         
Sbjct: 118 KHNCIHRDVKPENILIT-KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDT 176

Query: 142 ----------VGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPGVTTFFPF 189
                     +GC+FAE++  +PL    S+  +   I + +G+  P  + +     FF  
Sbjct: 177 QYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG 236

Query: 190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +   E    + L    P++    +  L+  L+++P ER++  + L H Y+
Sbjct: 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 69/297 (23%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDY 60
           + K+  IG G YG  Y+  +  +    + V LK    D   DG+PIS L +I+ L  + +
Sbjct: 9   FEKLNRIGEGTYGIVYRARDTTSG---EIVALKKVRMDNERDGIPISSLREITLLLNLRH 65

Query: 61  PLIFR-KE---NDKL--VYQIFEYTGLLNLRKVIKNFLDIINNPKTA--------KILRV 106
           P I   KE      L  ++ + EY       + + + LD +  P +         ++LR 
Sbjct: 66  PNIVELKEVVVGKHLDSIFLVMEYC-----EQDLASLLDNMPTPFSESQVKCLMLQLLRG 120

Query: 107 LSYYHSNRCLHGRL-------------------------NP------------YQA---L 126
           L Y H N  +H  L                          P            Y+A   L
Sbjct: 121 LQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELL 180

Query: 127 INLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF 186
           +  + YT  I  + +VGCI AE++  +PL    SE  +   I +L+G P+E   PG +  
Sbjct: 181 LGCTTYTTAI-DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD- 238

Query: 187 FPFI--YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
            P +  +   +    +L    P L  AG+ LL  +L  +PK+R T  +AL   Y+++
Sbjct: 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 67.3 bits (164), Expect = 4e-13
 Identities = 73/291 (25%), Positives = 122/291 (41%), Gaps = 61/291 (20%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           Y  +E +G G Y + YK    +     A + + +K +   +GVP + + + S LK + + 
Sbjct: 7   YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---EGVPFTAIREASLLKGLKHA 63

Query: 62  -------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIIN-NPKTAKILRVLSYYHSN 113
                  +I  KE    V++ + +T L          L   N      ++LR L+Y H  
Sbjct: 64  NIVLLHDIIHTKETLTFVFE-YMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ 122

Query: 114 RCLHGRLNPYQALIN------LSDYTVKIARLI--------------------------- 140
             LH  L P   LI+      L+D+ +  A+ I                           
Sbjct: 123 HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYS 182

Query: 141 ------SVGCIFAEMVIQEPLSEDASESRERI-SIFRLMGEPSEETLPGVT---TFFPFI 190
                   GCIF EM+  +P     S+  E++  I+ ++G P+E+T PGV+    + P  
Sbjct: 183 SALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242

Query: 191 YCYEESEPKDLAILLPDLE--PAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     +P+ L ++   L   P   DL  +ML + PK+RI+  DAL H Y+
Sbjct: 243 FLP--CKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 66.0 bits (162), Expect = 7e-13
 Identities = 64/287 (22%), Positives = 107/287 (37%), Gaps = 86/287 (29%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMD 59
           Y  +E +G G +G  Y    D      + V +K  +I           IL +I  LK++ 
Sbjct: 1   YEILEKLGEGSFGKVYLAR-DKKTG--KLVAIK--VIKKKKIKKDRERILREIKILKKLK 55

Query: 60  YPLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSY 109
           +P I R     ++ DKL Y + EY    +L  ++K    +  +   A+     IL  L Y
Sbjct: 56  HPNIVRLYDVFEDEDKL-YLVMEYCEGGDLFDLLKKRGRL--SEDEARFYLRQILSALEY 112

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------------ 140
            HS   +H  L P   L++  D  VK+     AR +                        
Sbjct: 113 LHSKGIVHRDLKPENILLD-EDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGK 171

Query: 141 ---------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                    S+G I  E++  +P      +  E   +F+ +G+P     P          
Sbjct: 172 GYGKAVDIWSLGVILYELLTGKPPFPGDDQLLE---LFKKIGKPKPPFPPPE-------- 220

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                          D+ P   DL++K+L  +P++R+T  +AL H +
Sbjct: 221 --------------WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPF 253

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.7 bits (161), Expect = 9e-13
 Identities = 58/287 (20%), Positives = 97/287 (33%), Gaps = 80/287 (27%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDY 60
           Y  +  +G G +G+ YK +    +   + V +K             +   +I  L+ + +
Sbjct: 1   YELLRKLGSGSFGTVYKAKH---KGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSH 57

Query: 61  PLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
           P I R     E+   +Y + EY    +L   +        +   AK     ILR L Y H
Sbjct: 58  PNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSR--GGPLSEDEAKKIALQILRGLEYLH 115

Query: 112 SNRCLHGRLNPYQALINLSDYTVKI-----ARLI-------------------------- 140
           SN  +H  L P   L++  +  VKI     A+ +                          
Sbjct: 116 SNGIIHRDLKPENILLD-ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGN 174

Query: 141 ---------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY 191
                    S+G I  E++  +P     +   +   I R++G P                
Sbjct: 175 GYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPP---------------- 218

Query: 192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
             E  EPK              DL++K L  +P +R T  + L H +
Sbjct: 219 -LEFDEPK-----WSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPW 259

Length = 260

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 64.7 bits (157), Expect = 3e-12
 Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 69/300 (23%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           + Y K+E +G G Y + YK +  V     A + + L+ +   +G P + + + S LK + 
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE---EGTPFTAIREASLLKGLK 61

Query: 60  YP-------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKI-----LRVL 107
           +        +I  KE   LV++ + +T L          L    +P+  K+     LR L
Sbjct: 62  HANIVLLHDIIHTKETLTLVFE-YVHTDLCQYMDKHPGGL----HPENVKLFLFQLLRGL 116

Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI--------------------- 140
           SY H    LH  L P   LI+      L+D+ +  A+ +                     
Sbjct: 117 SYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLL 176

Query: 141 ------------SVGCIFAEM---VIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                        VGCIF EM   V   P  +D  +  ERI  F ++G P+E+T PGV +
Sbjct: 177 GSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI--FLVLGTPNEDTWPGVHS 234

Query: 186 ---FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
              F P  +     +    A           DL  K+L+  PK R++   AL+H Y+ D+
Sbjct: 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 55/183 (30%), Positives = 73/183 (39%), Gaps = 50/183 (27%)

Query: 103 ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------------- 140
           ILR L Y HS   LH  L P   L+N ++  +KI     AR+                  
Sbjct: 115 ILRGLKYIHSANVLHRDLKPSNLLLN-TNCDLKICDFGLARIADPEHDHTGFLTEYVATR 173

Query: 141 ---------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                                SVGCI AEM+   PL        +   I  ++G PS+E 
Sbjct: 174 WYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233

Query: 180 LPGVTTFFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN 235
           L  + +       Y +S P         L P+ +P  +DLL KML  NP +RITV +AL 
Sbjct: 234 LNCIIS--LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291

Query: 236 HHY 238
           H Y
Sbjct: 292 HPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 40/177 (22%)

Query: 103 ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------------- 140
           ILR L Y HS   +H  L P    +N  D  +KI     AR                   
Sbjct: 127 ILRGLKYIHSAGIIHRDLKPSNIAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAPE 185

Query: 141 ---------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                          SVGCI AE++  + L   +    +   I  L+G P EE L  +++
Sbjct: 186 IMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS 245

Query: 186 --FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
                +I    +   KD   +     P  +DLL+KML ++P +RIT  +AL H Y  
Sbjct: 246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 65.0 bits (158), Expect = 3e-12
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 3/118 (2%)

Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT +   + SVGCI AEM+  +PL +      + + I ++ G PS+E +  +
Sbjct: 185 EVILNWMHYT-QTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL 243

Query: 184 --TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                  ++        KD   LLP+  P  V++L+KML ++ + RIT  +AL H Y+
Sbjct: 244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 64.0 bits (156), Expect = 6e-12
 Identities = 50/184 (27%), Positives = 71/184 (38%), Gaps = 44/184 (23%)

Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------- 140
           ++LR L Y HS   LH  L P    IN  D  +KI     AR++                
Sbjct: 122 QLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVT 181

Query: 141 ----------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                                 + GCIFAEM+  +PL   A E  +   I   +    EE
Sbjct: 182 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREE 241

Query: 179 TLPGVTTFFPFIYCYEESEPK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
               +    P     +  EP+  L  LLP + P  +D L+++L  NP +R+T  +AL H 
Sbjct: 242 DRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301

Query: 238 YYRD 241
           Y   
Sbjct: 302 YMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 72/309 (23%), Positives = 116/309 (37%), Gaps = 83/309 (26%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAY--QTVLLKADII---PDGVPISILTKISPLKE 57
           KY K+  IG+G +G  +K     A +    Q V LK  ++    +G PI+ L +I  L+ 
Sbjct: 13  KYEKLAKIGQGTFGEVFK-----ARHKKTKQIVALKKVLMENEKEGFPITALREIKILQL 67

Query: 58  MDYPLIFR----------KENDK--LVYQIFEY-----TGLLNLRKVIKNFLDIINNPKT 100
           + +  +              N      Y +FE+      GLL+ + V     +I    K 
Sbjct: 68  LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEI----KK 123

Query: 101 A--KILRVLSYYHSNRCLHGRLNPYQALIN------LSD-----------------YTVK 135
               +L  L Y H N+ LH  +     LI       L+D                 YT +
Sbjct: 124 VMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNR 183

Query: 136 IARLI--------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP 175
           +  L                       GCI AEM  + P+ +  +E  +   I +L G  
Sbjct: 184 VVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243

Query: 176 SEETLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV 230
           + E  PGV               +    + L   + D  P  +DL+ K+L ++P +RI  
Sbjct: 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKD--PHALDLIDKLLVLDPAKRIDA 301

Query: 231 NDALNHHYY 239
           + ALNH ++
Sbjct: 302 DTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 47/183 (25%)

Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------- 140
           +IL  L Y HS   LH  L P   L+N +D  +KI     AR                  
Sbjct: 113 QILCGLKYIHSANVLHRDLKPGNLLVN-ADCELKICDFGLARGFSENPGENAGFMTEYVA 171

Query: 141 -----------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE 177
                                  SVGCI AE++ ++P+ +      +   I +++G P E
Sbjct: 172 TRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231

Query: 178 ETLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN 235
           ETL  + +     +I        K    + P+  P  +DLL+K+L  +P +RI+V +AL 
Sbjct: 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291

Query: 236 HHY 238
           H Y
Sbjct: 292 HPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 60.7 bits (148), Expect = 6e-11
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP------GVTTFFPFIYCYE 194
           +VGC+F E++   PL    +E  +   I  ++G P  E L        +   FP      
Sbjct: 184 AVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPS----- 238

Query: 195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             +   L  LLP+    G+DLL+K+L  +P ERIT   AL H Y+
Sbjct: 239 -KKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 70/241 (29%)

Query: 52  ISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRV 106
           I  LKE+     FR END+L Y +FEY    NL +++K+      +    +     IL+ 
Sbjct: 60  IVKLKEV-----FR-ENDEL-YFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQG 111

Query: 107 LSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------------- 140
           L++ H +   H  L P   L++     VKI     AR I                     
Sbjct: 112 LAHIHKHGFFHRDLKPENLLVS-GPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEIL 170

Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP------ 181
                        ++GCI AE+    PL   +SE  +   I  ++G P+++  P      
Sbjct: 171 LRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230

Query: 182 ---GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
              G    FP      +  P  L  L+P+  P  +DL++ MLR +PK+R T + AL H Y
Sbjct: 231 SKLGFR--FP------QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Query: 239 Y 239
           +
Sbjct: 283 F 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 70/298 (23%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI---SILTKISPLKEM 58
            KY  + ++G G YG   KC     +   + V +K     +       + L ++  L+++
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRN---KATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL 57

Query: 59  DYPLI------FRKENDKLVYQIFEYTG--LLNLRKVIKNFLDIINNPKTAK-----ILR 105
            +  I      FR++    +Y +FEY    LL L +     L     P   +     +L+
Sbjct: 58  RHENIVNLKEAFRRKGR--LYLVFEYVERTLLELLEASPGGLP----PDAVRSYIWQLLQ 111

Query: 106 VLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI-------------------- 140
            ++Y HS+  +H  + P   L++ S   +K+     AR +                    
Sbjct: 112 AIAYCHSHNIIHRDIKPENILVSESG-VLKLCDFGFARALRARPASPLTDYVATRWYRAP 170

Query: 141 ----------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPG 182
                           ++GCI AE++  EPL    S+  +   I + +G   PS + L  
Sbjct: 171 ELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230

Query: 183 VTTFFPFIYCYEESEPKDLAILLPD-LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
               F  +   E S+P+ L    P  +    +D L+  LR++PKER+T ++ L H Y+
Sbjct: 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 74/308 (24%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVP--ISILTKISPLKEMDY 60
           +Y+  E+IG+G YG    C         +  + K + + + V     IL +I  L+ + +
Sbjct: 1   RYKIQEVIGKGSYGVV--CSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH 58

Query: 61  PLIFRKENDKL---------VYQIFEYTGLLNLRKVIKNFLDIINNPKTA--------KI 103
           P I   ++  L         +Y +FE     +L +VIK      N+  T         ++
Sbjct: 59  PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-----ANDDLTPEHHQFFLYQL 112

Query: 104 LRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR-------------------- 138
           LR L Y H+    H  L P   L N +D  +KI     AR                    
Sbjct: 113 LRALKYIHTANVFHRDLKPKNILAN-ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 171

Query: 139 -------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                              + S+GCIFAE++  +PL    +   +   I  L+G PS ET
Sbjct: 172 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231

Query: 180 LPGVTTFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           +  V       ++    + +P   +   P+ +P  + LL+++L  +PK+R T  +AL   
Sbjct: 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291

Query: 238 YYRDVVSV 245
           Y++ +  V
Sbjct: 292 YFKGLAKV 299

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 53/248 (21%)

Query: 10  IGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFR 65
           +G G +G+ Y    D      + V +K  II       +   +L +I  LK++++P I +
Sbjct: 1   LGEGGFGTVYLAR-DKKTG--KKVAIK--IIKKEDSSSLLEELLREIEILKKLNHPNIVK 55

Query: 66  ----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYHSNRCLH 117
                E++  +Y + EY    +L+ ++K     ++  +  +    IL  L Y HSN  +H
Sbjct: 56  LYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIH 115

Query: 118 GRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE 177
             L P   L++  +  VK+A                    D   S       +L+     
Sbjct: 116 RDLKPENILLDSDNGKVKLA--------------------DFGLS-------KLLTSDKS 148

Query: 178 ETLPGVTTFF---PFIYCYEE--SEPKD---LAILLPDLEPAGVDLLQKMLRVNPKERIT 229
                V T     P +   +   SE  D   L ++L +L     DL++KML+ +P++R +
Sbjct: 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYELPEL-KDLIRKMLQKDPEKRPS 207

Query: 230 VNDALNHH 237
             + L H 
Sbjct: 208 AKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 50/184 (27%), Positives = 71/184 (38%), Gaps = 45/184 (24%)

Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARL----------------- 139
           +ILR L Y HS   LH  + P   L+N S+  +KI     AR+                 
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVN-SNCVLKICDFGLARVEEPDESKHMTQEVVTQY 169

Query: 140 -------------------ISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                               SVGCIFAE++ +  L +  S  ++   I  L+G PS E +
Sbjct: 170 YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229

Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPA---GVDLLQKMLRVNPKERITVNDALNHH 237
                           +P  L +L      A    V LL +ML  +P +RI+  DAL H 
Sbjct: 230 RSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289

Query: 238 YYRD 241
           Y  +
Sbjct: 290 YLDE 293

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 57.4 bits (139), Expect = 8e-10
 Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 62/293 (21%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           EKY  + L+G G YG   KC+    +   Q V +K  +  +     ++ KI+ ++E+   
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKH---KETGQIVAIKKFL--ESEDDKMVKKIA-MREIRML 54

Query: 62  LIFRKEN----------DKLVYQIFEY---TGLLNLRKVIKNFLDIINNPKTA-KILRVL 107
              R EN           K +Y +FE+   T L +L K   N LD     K   +ILR +
Sbjct: 55  KQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGI 113

Query: 108 SYYHSNRCLHGRLNPYQALINLS-------------------DYT--------------- 133
            + HS+  +H  + P   L++ S                    YT               
Sbjct: 114 EFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLV 173

Query: 134 --VKIARLI---SVGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPGVTTF 186
              K  R +   +VGC+  EM+  EPL    S+  +   I + +G   P  + +      
Sbjct: 174 GDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233

Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           F  +   E  E + L    P L    +DL ++ LR++P +R + +  L+H ++
Sbjct: 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 2/101 (1%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP--FIYCYEESEP 198
           SVGCI AEM+  + L +      +   I ++ G P  E +  +       +I    +   
Sbjct: 200 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR 259

Query: 199 KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           KD + L P   P  VDLL+KML ++  +R+T  +AL H Y+
Sbjct: 260 KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 20/115 (17%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD 200
           SVGCI  EM+    L        +   I   +G PS+E +  +    P +  Y E+ PK 
Sbjct: 202 SVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQ---PTVRNYVENRPKY 258

Query: 201 LAI----LLPD-LEPAGV------------DLLQKMLRVNPKERITVNDALNHHY 238
                  L PD L P               DLL KML ++P++RI+V+DAL H Y
Sbjct: 259 AGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 69/301 (22%), Positives = 112/301 (37%), Gaps = 72/301 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++K+  +  IG G YG  YK  +           ++ D   +G PI+ + +I  L+++++
Sbjct: 6   VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNH 65

Query: 61  PLI---------------FRKENDKLVYQIFEYT-----GLLNLRKVIKNFLDIINNPKT 100
             I               F+K+     Y +FEY      GLL    V  +F +       
Sbjct: 66  RNIVNLKEIVTDKQDALDFKKDKGAF-YLVFEYMDHDLMGLLESGLV--HFSEDHIKSFM 122

Query: 101 AKILRVLSYYHSNRCLHGRLNPYQALIN------LSD--------------YTVKIARLI 140
            ++L  L+Y H    LH  +     L+N      L+D              YT K+  L 
Sbjct: 123 KQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLW 182

Query: 141 --------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                               S GCI  E+  ++P+ +   E  +   I RL G P     
Sbjct: 183 YRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242

Query: 181 PGVTTFFPFIYCYEESEPKD-----LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN 235
           P V    P+   +   +PK      L      +    +DLL  ML ++P +R T  +ALN
Sbjct: 243 PDVIKL-PY---FNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298

Query: 236 H 236
            
Sbjct: 299 S 299

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 51.7 bits (122), Expect = 1e-07
 Identities = 52/282 (18%), Positives = 92/282 (32%), Gaps = 45/282 (15%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP- 61
            YR +  +G G +G  Y    D    A + VL K            L +I  L  +++P 
Sbjct: 1   SYRILRKLGEGSFGEVYLAR-DRKLVALK-VLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 62  ----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK------TAKILRVLSYYH 111
               L    +++  +Y + EY    +L  ++K         +       A+IL  L Y H
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASE-------SRE 164
           S   +H  + P   L++     VK+        +          +  ++        + E
Sbjct: 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE 178

Query: 165 RISIFRLMGEPSEETLP--GVTTF------FPFIYCYEESEPKDL--------------- 201
            +    L    S   +   G+T +       PF      S                    
Sbjct: 179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238

Query: 202 --AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
                   +  A  DLL+K+L  +PK R++ +  L+H     
Sbjct: 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH 280

Length = 384

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 48.9 bits (116), Expect = 8e-07
 Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)

Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 128 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 186

Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 187 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 246

Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 247 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 19/114 (16%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD 200
           SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ PK 
Sbjct: 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRPKY 259

Query: 201 LAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
             +  P L P  +                DLL KML ++P +RI+V++AL H Y
Sbjct: 260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++  ++YT  I  L S+GCI AEM++  P+    S   + + I +++G P+E+ L  +
Sbjct: 240 ELMLGATNYTTHI-DLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM 298

Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEP-AGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
              +  I  + + +PKDL  + P   P   ++ + + L+  P +R+   +AL   ++ D+
Sbjct: 299 NPNYADIK-FPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357

Length = 440

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 47.4 bits (112), Expect = 3e-06
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP-- 198
           SVGCI AE++  + L        +   I  ++G PS E L  +++       Y +S P  
Sbjct: 201 SVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS--EHARKYIQSLPHM 258

Query: 199 --KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             +DL  +     P  +DLL+KML ++  +RI+ ++AL H Y+
Sbjct: 259 PQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYF 301

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 47.0 bits (111), Expect = 3e-06
 Identities = 67/311 (21%), Positives = 119/311 (38%), Gaps = 83/311 (26%)

Query: 10  IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP------LI 63
           +GRG YG  YK +    ++  +  L    I   G+ +S   +I+ L+E+ +P       +
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYAL--KQIEGTGISMSACREIALLRELKHPNVIALQKV 66

Query: 64  FRKENDKLVYQIFEYT-----GLLNLRKVIKNFLDIINNPKTA------KILRVLSYYHS 112
           F   +D+ V+ +F+Y       ++   +  K     +  P++       +IL  + Y H+
Sbjct: 67  FLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA 126

Query: 113 NRCLHGRLNPYQALI--------------------------NLSD--------------- 131
           N  LH  L P   L+                           L+D               
Sbjct: 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 186

Query: 132 -----YTVKIARLISVGCIFAEMVIQEPL----SEDASESR-----ERISIFRLMGEPSE 177
                +  K   + ++GCIFAE++  EP+     ED   S      +   IF +MG P++
Sbjct: 187 LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPAD 246

Query: 178 ETLPGVTTF--FPFIYCYEESEPKDLAILLPDLEPAGVD-------LLQKMLRVNPKERI 228
           +    +     +P +           + L+  +E   V        LLQK+L ++P +RI
Sbjct: 247 KDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRI 306

Query: 229 TVNDALNHHYY 239
           T   AL   Y+
Sbjct: 307 TSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 46.0 bits (110), Expect = 5e-06
 Identities = 63/291 (21%), Positives = 106/291 (36%), Gaps = 91/291 (31%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI---SILTKISPLKEMD 59
           ++ + EL+GRG +GS Y   +    +  + + +K+  +         ++  +I  L  + 
Sbjct: 1   EWTRGELLGRGSFGSVYLALDK---DTGELMAVKSVELSGDSEEELEALEREIRILSSLQ 57

Query: 60  YPLIFR-----KENDKLVYQIF-EYTGLLNLRKVIKNFLDIINNPK----TAKILRVLSY 109
           +P I R     ++ +K    IF EY    +L  ++K F   +  P     T +IL  L+Y
Sbjct: 58  HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILEGLAY 116

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------------ 140
            HSN  +H  +     L++ SD  VK+     A+ +                        
Sbjct: 117 LHSNGIVHRDIKGANILVD-SDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI 175

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP--SEETLPGVTTF 186
                       S+GC   EM                       G+P  SE   P     
Sbjct: 176 RGEEYGRAADIWSLGCTVIEM---------------------ATGKPPWSELGNP----- 209

Query: 187 FPFIYCYEESEPKDLAILLPD-LEPAGVDLLQKMLRVNPKERITVNDALNH 236
              +Y    S        +P+ L     D L+K LR +PK+R T ++ L H
Sbjct: 210 MAALYKIGSSGEPPE---IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 19/114 (16%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD 200
           SVGCI  E+V    + +      +   +   +G PS E +       P +  Y E+ P+ 
Sbjct: 207 SVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM---NRLQPTVRNYVENRPQY 263

Query: 201 LAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
             I   +L P  +                DLL KML ++P +RI+V++AL H Y
Sbjct: 264 PGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 69/319 (21%), Positives = 117/319 (36%), Gaps = 99/319 (31%)

Query: 10  IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP------LI 63
           +GRG YG  YK +    ++     L    I   G+ +S   +I+ L+E+ +P       +
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYAL--KQIEGTGISMSACREIALLRELKHPNVISLQKV 66

Query: 64  FRKENDKLVYQIFEYT-----GLLNLRKVIKNFLDIINNPKTA------KILRVLSYYHS 112
           F    D+ V+ +F+Y       ++   +  K     +  P+        +IL  + Y H+
Sbjct: 67  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 126

Query: 113 NRCLHGRLNPYQALI--------------------------NLSD--------------- 131
           N  LH  L P   L+                           L+D               
Sbjct: 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 186

Query: 132 -----YTVKIARLISVGCIFAEMVIQEPL----SEDASESR-----ERISIFRLMGEPSE 177
                +  K   + ++GCIFAE++  EP+     ED   S      +   IF +MG P++
Sbjct: 187 LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPAD 246

Query: 178 ------ETLPGVTTFF-----------PFIYCYEESEPKDLAILLPDLEPAGVDLLQKML 220
                 + +P  +T               I   E+ + K      PD       LLQK+L
Sbjct: 247 KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK------PD--SKAFHLLQKLL 298

Query: 221 RVNPKERITVNDALNHHYY 239
            ++P +RIT   A+   Y+
Sbjct: 299 TMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)

Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264

Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 65/299 (21%), Positives = 113/299 (37%), Gaps = 81/299 (27%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL 62
           K+  + ++G G YG   KC     +        K     + V  + L ++  L+ +    
Sbjct: 2   KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN 61

Query: 63  I------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA-----------KILR 105
           I      FR+     +Y +FEY        V KN L+++                 ++++
Sbjct: 62  IVELKEAFRRRGK--LYLVFEY--------VEKNMLELLEEMPNGVPPEKVRSYIYQLIK 111

Query: 106 VLSYYHSNRCLHGRLNPYQALI---------------NLSD-----YTVKIAR------- 138
            + + H N  +H  + P   LI               NLS+     YT  +A        
Sbjct: 112 AIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPE 171

Query: 139 ------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE-PSEET------ 179
                       + SVGCI  E+   +PL    SE  +  +I +++G  P+E+       
Sbjct: 172 LLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSN 231

Query: 180 --LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
               G+   FP +   +  E + L IL   L    +DL++ +L++NP +R      LNH
Sbjct: 232 PRFHGLR--FPAVNHPQSLERRYLGILSGVL----LDLMKNLLKLNPTDRYLTEQCLNH 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	246
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.98
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.98
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.98
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.98
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.98
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.98
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.97
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.97
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.97
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.96
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.95
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.95
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.94
KOG3653	534	consensus Transforming growth factor beta/activin	99.94
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.92
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.92
KOG1152	772	consensus Signal transduction serine/threonine kin	99.92
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.92
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.89
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.88
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.87
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.86
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.86
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.85
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.85
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.83
PRK10345	210	hypothetical protein; Provisional	99.82
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.81
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.81
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.8
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.8
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.8
PRK12274	218	serine/threonine protein kinase; Provisional	99.79
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.75
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.75
smart00090	237	RIO RIO-like kinase.	99.74
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.73
PRK14879	211	serine/threonine protein kinase; Provisional	99.73
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.72
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.71
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.71
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.7
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.62
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.57
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.55
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.52
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.44
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.43
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.37
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.31
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.23
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.19
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.18
KOG1243	690	consensus Protein kinase [General function predict	99.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.11
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.08
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.07
KOG3087	229	consensus Serine/threonine protein kinase [General	99.04
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.01
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.0
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.88
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.8
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.75
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.75
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.66
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.66
PRK09902	216	hypothetical protein; Provisional	98.56
COG4248	637	Uncharacterized protein with protein kinase and he	98.4
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.39
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.14
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.02
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.91
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.88
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.88
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.8
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.79
PF01636	239	APH: Phosphotransferase enzyme family This family	97.72
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.67
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.61
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.61
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.49
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.4
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.36
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.29
PLN02876	822	acyl-CoA dehydrogenase	97.27
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.22
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.06
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.03
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.01
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.91
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.86
PRK05231	319	homoserine kinase; Provisional	96.79
PRK12396	409	5-methylribose kinase; Reviewed	96.79
PLN02236	344	choline kinase	96.64
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.17
PLN02756	418	S-methyl-5-thioribose kinase	96.01
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.0
PRK10593	297	hypothetical protein; Provisional	95.71
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.7
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	95.61
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.43
PTZ00384	383	choline kinase; Provisional	95.08
KOG2270	520	consensus Serine/threonine protein kinase involved	94.96
KOG1236	565	consensus Predicted unusual protein kinase [Genera	94.59
PTZ00296	442	choline kinase; Provisional	92.76
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	92.48
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	91.76
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	90.56
KOG3021	313	consensus Predicted kinase [General function predi	89.6
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	89.44
COG2334	331	Putative homoserine kinase type II (protein kinase	88.38
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	88.14
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	87.36
PRK06148	1013	hypothetical protein; Provisional	87.06

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=4.1e-53  Score=315.01  Aligned_cols=238  Identities=32%  Similarity=0.515  Sum_probs=209.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|...++||+|.||.||+|++.. +  ++.||||.   ....++......+||..|+.++|+||+.+    .....+.
T Consensus         1 ~~rY~~~~~lGEG~~gvVyka~d~~-t--~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~   77 (318)
T KOG0659|consen    1 MDRYEKLEKLGEGTYGVVYKARDTE-T--GKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLS   77 (318)
T ss_pred             CchhhhhhhhcCcceEEEEEEEecC-C--CcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceE
Confidence            4689999999999999999999988 6  88899988   45556668899999999999999999998    6678899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      +|+||++ .||...++...    ....+.++.+++.||+|||++.|+||||||.|+|++++| ..|++            
T Consensus        78 lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g-~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   78 LVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG-QLKIADFGLARFFGSPN  155 (318)
T ss_pred             EEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC-cEEeecccchhccCCCC
Confidence            9999999 99999997643    445666777999999999999999999999999999888 33444            


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  ||||.|||++||+.|.+.|.+.++.+|+..+++.+|.|.++.|+++...+++
T Consensus       156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY  235 (318)
T KOG0659|consen  156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY  235 (318)
T ss_pred             cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence                                        4999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      .... ..+......+++..++++.||+.+||.+||.+|+|+.|+|+|+||++.+.
T Consensus       236 ~~~~-~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~  289 (318)
T KOG0659|consen  236 VKIQ-QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL  289 (318)
T ss_pred             HHHh-cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence            6533 33334444477889999999999999999999999999999999998654

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.5e-52  Score=319.93  Aligned_cols=237  Identities=31%  Similarity=0.510  Sum_probs=208.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe------cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~   72 (246)
                      +.|+.+.+|++|+||.||+|+++. +  .+.||+|.   .....+.+...++||.+|.+.+|||||.+      .+-+.+
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~-t--~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKK-T--DEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCC-c--ceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            579999999999999999999998 6  88899888   56777888999999999999999999998      455789


Q ss_pred             EEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      |+|||||+ -||.+++.+..    ....+..+.|+++||+|||.+.|+|||+||+|+|++..| ..|+            
T Consensus       153 y~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G-~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  153 YIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG-ILKIADFGLAREYGSP  230 (419)
T ss_pred             eeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC-cEEecccchhhhhcCC
Confidence            99999999 99999997644    344555666999999999999999999999999999888 3333            


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +||||+|||++||+++++.|.+..+.+|+..|+..+|.|....|++....+.
T Consensus       231 ~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~  310 (419)
T KOG0663|consen  231 LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPA  310 (419)
T ss_pred             cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccch
Confidence                                        4599999999999999999999999999999999999999999999999887


Q ss_pred             cc-cccCCCCcchhhhhCCC--CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          189 FI-YCYEESEPKDLAILLPD--LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~-~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +. ..++..+...+...++.  +++...+|+..+|++||.+|.||+|+|.|+||.+.+
T Consensus       311 ~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  311 VKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             hhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence            74 56777777766665554  559999999999999999999999999999999953

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-52  Score=328.82  Aligned_cols=214  Identities=20%  Similarity=0.271  Sum_probs=173.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc------cCC--CCCcchhhhhhcccccCCCCceEEe----cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD------IIP--DGVPISILTKISPLKEMDYPLIFRK----END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~------~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~   69 (246)
                      +.|.+.+.||+|+||.|.+|..+. +  ++.||+|+.      ..+  ........+|+++|++|+||+||++    +..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~-t--gk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKK-T--GKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcc-c--CcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            468899999999999999999988 6  889999991      111  2234456899999999999999999    667


Q ss_pred             ceEEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      +..||||||++||+|.+.+-.+   .+..-+.+..|++.||.|||++||+||||||+|||++.+.               
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            7889999999999999998543   3445566666999999999999999999999999998774               


Q ss_pred             ----------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCcCCC
Q 036362          132 ----------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESR-ERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       132 ----------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  182 (246)
                                                  ..+...|+||+||++|-+++|.+||....... ...++.+..-.        
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~--------  400 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA--------  400 (475)
T ss_pred             cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc--------
Confidence                                        34455679999999999999999998765544 44444431000        


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                       -....|..+++++++||.+||..||+.|||++|+|+||||+.++
T Consensus       401 -----------------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  401 -----------------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             -----------------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence                             01122467899999999999999999999999999999999765

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-51  Score=330.76  Aligned_cols=234  Identities=29%  Similarity=0.509  Sum_probs=205.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe------cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~   72 (246)
                      +.|+.+++||+|+||.||+|++.. +  ++.||+|.   ....++......+||.+|++|+||||+++      .....+
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~-t--gkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si  193 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLE-T--GKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI  193 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecc-c--CcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence            578999999999999999999988 6  89999998   45567888899999999999999999998      235799


Q ss_pred             EEEEeccCcccHHHHHhh----hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------
Q 036362           73 YQIFEYTGLLNLRKVIKN----FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------  135 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------  135 (246)
                      |||+||++ .||.-++..    +++..+..++.||+.||+|||++||+|||||.+|||+|.+| ..|             
T Consensus       194 YlVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G-~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  194 YLVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG-VLKIADFGLARFYTPS  271 (560)
T ss_pred             EEEEeccc-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC-CEEeccccceeeccCC
Confidence            99999999 999988864    55777888888999999999999999999999999999888 222             


Q ss_pred             ----------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          136 ----------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       136 ----------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  .+|+||.|||++||+.|+++|.+.++.+|+..|++++|.|.+..|+ ....+
T Consensus       272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~~kLP  350 (560)
T KOG0600|consen  272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-VSKLP  350 (560)
T ss_pred             CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-cccCC
Confidence                                        2469999999999999999999999999999999999999999999 66666


Q ss_pred             ccccccCCCC-cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          188 PFIYCYEESE-PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       188 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      .+....+... ...+.+....+++.+.+|+..||..||.+|.||.++|+|+||..
T Consensus       351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence            5444333333 34566668899999999999999999999999999999999944

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.4e-49  Score=308.34  Aligned_cols=238  Identities=35%  Similarity=0.618  Sum_probs=210.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCc-eEEe-----cCC---
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPL-IFRK-----END---   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~-----~~~---   69 (246)
                      ..|..+++||+|+||+||+|+.+. +  ++.||+|.   ....++.+....+|+.+++.++|+| |+.+     ...   
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~-~--g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKR-T--GKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEec-C--CCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence            468889999999999999999998 6  78999998   3333668889999999999999999 9998     222   


Q ss_pred             --ceEEEEEeccCcccHHHHHhhhccc-------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--
Q 036362           70 --KLVYQIFEYTGLLNLRKVIKNFLDI-------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--  138 (246)
Q Consensus        70 --~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--  138 (246)
                        ..+++|+||++ .+|.+++......       ....+++||+.||+|||+++|+||||||+|||++++| ..|++|  
T Consensus        88 ~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G-~lKlaDFG  165 (323)
T KOG0594|consen   88 GIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG-VLKLADFG  165 (323)
T ss_pred             ccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC-cEeeeccc
Confidence              38999999999 9999999765421       2445566999999999999999999999999999877 446666  


Q ss_pred             --------------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          139 --------------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       139 --------------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                            |||+|||++||+++++.|.+..+.+++..+++.+|.|....|
T Consensus       166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W  245 (323)
T KOG0594|consen  166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW  245 (323)
T ss_pred             hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence                                                  999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccccCCCC-cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          181 PGVTTFFPFIYCYEESE-PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ++....+++...+..+. ...+....+..++...|++.+||+++|..|.||+.+|+||||.++..
T Consensus       246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence            99999999988888777 67788878888899999999999999999999999999999998753

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4.5e-50  Score=304.00  Aligned_cols=237  Identities=24%  Similarity=0.427  Sum_probs=193.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|+.+.++|+|+||+|++|+++. +  ++.||||....++   ....-.++||++|++++|+|+|.+    ..++.++
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~-T--gqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklh   77 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKD-T--GQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLH   77 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCC-c--ccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeE
Confidence            7899999999999999999999999 7  9999999943333   345678999999999999999998    6678999


Q ss_pred             EEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      +|+|||+ -+..+-++.+..    .....+..|++.|+.|+|+++++||||||+|||++..| ..|++|           
T Consensus        78 LVFE~~d-hTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g-vvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   78 LVFEYCD-HTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG-VVKLCDFGFARTLSAPG  155 (396)
T ss_pred             EEeeecc-hHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC-cEEeccchhhHhhcCCc
Confidence            9999999 777677766542    23444555999999999999999999999999999777 444444           


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   |||+||+++||++|.+.|.+.++.+++..|...+|.-.+....-....+-|
T Consensus       156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F  235 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF  235 (396)
T ss_pred             chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence                                         999999999999999999999999999999999998766543322222222


Q ss_pred             cc-ccC-CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          190 IY-CYE-ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       190 ~~-~~~-~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      -. .++ ......++...++++.-+.||+++||..||++|+|.+|+|.||+|.++
T Consensus       236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence            11 111 122234555667889999999999999999999999999999999764

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-50  Score=319.23  Aligned_cols=237  Identities=26%  Similarity=0.443  Sum_probs=202.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCC-CCceEEe-----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMD-YPLIFRK-----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~-~~~i~~~-----~~~~~~   72 (246)
                      |++|.++++||.|+||.||+|+.+. +  +..||||...  ...-....-+||+..|++++ ||||+++     +....+
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~-~--~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L   85 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKE-T--GELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL   85 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecC-C--CceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence            5789999999999999999999988 6  7889999821  11223445678999999998 9999998     333499


Q ss_pred             EEEEeccCcccHHHHHhhh----cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           73 YQIFEYTGLLNLRKVIKNF----LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      |+||||++ .+|.++++..    ++..+..++.||++||+|+|++|+.|||+||||||+... ...|++|          
T Consensus        86 ~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~-~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   86 YFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGN-DVIKIADFGLAREVRSK  163 (538)
T ss_pred             eeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccc-ceeEecccccccccccC
Confidence            99999999 9999999765    233444455599999999999999999999999999842 3455555          


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC-CCCccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG-VTTFFP  188 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  188 (246)
                                                   +||+|||++|+.+=++.|.+.++.+++.+|.+.+|.|....|+. ......
T Consensus       164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~  243 (538)
T KOG0661|consen  164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA  243 (538)
T ss_pred             CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence                                         99999999999999999999999999999999999999888876 444455


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ....++...+..+..+.+.+++++.+++.+||..||.+||||.++|+||||+.-
T Consensus       244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence            566788888888899999999999999999999999999999999999999863

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-50  Score=309.42  Aligned_cols=236  Identities=30%  Similarity=0.437  Sum_probs=205.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe---------cCCc
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK---------ENDK   70 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~   70 (246)
                      +|..++.||+|+||.|+.|.++. +  ++.||+|.   ........++..+|+.+|+.++|+||+.+         ..-+
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~-t--~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKR-T--GEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             eecccccccCcceeeEEEEEEcC-C--CCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence            45667999999999999999988 6  79999998   35566678899999999999999999987         3457


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      .+|+|+|+++ .||.+.++...   +....-.+.||+.||+|+|+.||+|||+||+|++++.+-                
T Consensus       100 DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~  178 (359)
T KOG0660|consen  100 DVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF  178 (359)
T ss_pred             eeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc
Confidence            8999999998 99999998653   233344455999999999999999999999999998665                


Q ss_pred             -------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 -------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 -------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                               ...+.+||||+|||++||++|++.|.+.+..+|+..+.+.+|.|+++....+.+.
T Consensus       179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~  258 (359)
T KOG0660|consen  179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE  258 (359)
T ss_pred             CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence                                     1233345999999999999999999999999999999999999988876665533


Q ss_pred             --cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          187 --FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       187 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                        ..++...+..+...+...+++.++.+.||+++||..||.+|+|++|+|+|||++..
T Consensus       259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence              34777888889999999999999999999999999999999999999999999875

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-48  Score=303.66  Aligned_cols=213  Identities=21%  Similarity=0.303  Sum_probs=175.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe----cCCc-eEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDK-LVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~-~~~l   74 (246)
                      ++.+.++.||+|..|+||+|+++. +  ++.+|+|+  ....+....++.+|+++++..+||+||++    ...+ ..++
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~-t--~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI  155 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKP-T--GKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI  155 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcC-C--CeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence            356778899999999999999998 6  88999999  34556667899999999999999999998    4444 5999


Q ss_pred             EEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           75 IFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      +||||++|||++++..   ..+..+..+..++++||.|||+ ++||||||||+|+|++..| .+|++|            
T Consensus       156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG-eVKicDFGVS~~lvnS~a  234 (364)
T KOG0581|consen  156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG-EVKICDFGVSGILVNSIA  234 (364)
T ss_pred             ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC-CEEeccccccHHhhhhhc
Confidence            9999999999999986   4556666677799999999995 9999999999999999877 555555            


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCC--cchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDA--SESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                               |||||+.+.|+..|+.|+...  .....+..+......|++.             
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~-------------  301 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPR-------------  301 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCC-------------
Confidence                                     999999999999999999875  1222333333332222221             


Q ss_pred             ccCCCCcchhhhhCC-CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          192 CYEESEPKDLAILLP-DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                  ++. .+|+++++|+..||++||.+|||++|+++|||++...
T Consensus       302 ------------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  302 ------------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             ------------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence                        112 4899999999999999999999999999999999754

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-48  Score=313.38  Aligned_cols=210  Identities=23%  Similarity=0.350  Sum_probs=183.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      .+|..++.||.|+|++|++|+.+. +  ++.||||+    ....+.....+.+|-.+|.+| +||+|+++    .+...+
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~-t--~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKA-T--GKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             hhcchhheeccccceeEEEeeecC-C--CceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            589999999999999999999988 6  88999999    455566677888999999999 79999998    678899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      |.|+||+++|+|.++|++..   +....-++++|+.||+|||++|||||||||+|||+|.++                  
T Consensus       150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~  229 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK  229 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence            99999999999999998753   444455666999999999999999999999999999877                  


Q ss_pred             ---------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          132 ---------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       132 ---------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                       .....+|+|+|||++|+|+.|.+||.+.++.-.+++|..+.-.    
T Consensus       230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~----  305 (604)
T KOG0592|consen  230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYE----  305 (604)
T ss_pred             cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhccc----
Confidence                                             2233345999999999999999999999999999998885211    


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                               .++++++.++||++++|..||.+|+|+++|-+||||++++
T Consensus       306 -------------------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  306 -------------------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             -------------------------CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence                                     1267899999999999999999999999999999999974

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-47  Score=296.47  Aligned_cols=234  Identities=24%  Similarity=0.442  Sum_probs=191.3

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe--------cC-CceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK--------EN-DKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~-~~~~~   73 (246)
                      .|+-.+++|.|+||.||.|.... +  .+.||||.   .......-.+|+.+|+.++|||||++        .. .-...
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e-~--~~~vAIKK---v~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln   98 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRE-T--EEEVAIKK---VLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN   98 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcC-C--CceeEEEE---ecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence            46778999999999999999988 6  88999997   23334466789999999999999998        22 23566


Q ss_pred             EEEeccCcccHHHHHhhh-------cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------
Q 036362           74 QIFEYTGLLNLRKVIKNF-------LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------  138 (246)
                      +||||++ .+|.++++..       ..-..+.++.||++||.|||+.||+||||||+|+|+|.+....|++|        
T Consensus        99 lVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~  177 (364)
T KOG0658|consen   99 LVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV  177 (364)
T ss_pred             HHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence            8999999 9999999742       12344556669999999999999999999999999999975555555        


Q ss_pred             -------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          139 -------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       139 -------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                     +||.||+++||+.|.+.|.+.+..+|+..+.+.+|.|+.+....+....
T Consensus       178 ~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y  257 (364)
T KOG0658|consen  178 KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY  257 (364)
T ss_pred             cCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence                                           9999999999999999999999999999999999999988766554332


Q ss_pred             ccccccCCCCcchhhh-hCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          188 PFIYCYEESEPKDLAI-LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      . ...++......+.+ .....++++.||+.++|+++|.+|.|+.|++.||||.++..
T Consensus       258 ~-~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  258 T-EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             c-cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence            1 22233333333333 44678999999999999999999999999999999998643

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-47  Score=294.26  Aligned_cols=211  Identities=18%  Similarity=0.290  Sum_probs=181.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|+++++||+|+||+|+.++.++ +  ++.||+|+    .............|..+|..++||+|+++    .+.+++|
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~d-t--~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKD-T--GKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcc-c--CceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            689999999999999999999987 6  88888888    23333567789999999999999999998    7789999


Q ss_pred             EEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           74 QIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +|++|+.||.|...+++   +++.....+++.|+.||.|||++||||||+||+|||+|.+|                   
T Consensus       102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~  181 (357)
T KOG0598|consen  102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA  181 (357)
T ss_pred             EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence            99999999999999984   55667777788999999999999999999999999999888                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         ...+.+|.||+|+++|+|++|.+||.+.+.......+...-...                 
T Consensus       182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~-----------------  244 (357)
T KOG0598|consen  182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL-----------------  244 (357)
T ss_pred             cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC-----------------
Confidence                               22334569999999999999999999988877777777631110                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC----CHHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI----TVNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~----s~~e~l~h~~~~~~~  243 (246)
                                 .+.-++++++||++++|+.||++|.    ++.++-+||||++++
T Consensus       245 -----------~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in  288 (357)
T KOG0598|consen  245 -----------PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN  288 (357)
T ss_pred             -----------CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence                       0123899999999999999999996    799999999999874

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4e-46  Score=263.85  Aligned_cols=239  Identities=34%  Similarity=0.542  Sum_probs=208.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|.-.++||+|.||+||++++.. +  .+.||+|.   ....++.+...++||-+++.++|.||+++    .+++.+.
T Consensus         1 m~~ydkmekigegtygtvfkarn~~-t--~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkklt   77 (292)
T KOG0662|consen    1 MQKYDKMEKIGEGTYGTVFKARNRE-T--HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT   77 (292)
T ss_pred             CcchHHHHhhcCCcceeeEecccCC-c--cceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeE
Confidence            5789999999999999999999988 6  88999888   66778889999999999999999999998    6788999


Q ss_pred             EEEeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------------  135 (246)
                      +|+|||. -+|..+....+..    .....+.|++.||.++|++++.|||+||+|.|++.+| ..+              
T Consensus        78 lvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng-elkladfglarafgipv  155 (292)
T KOG0662|consen   78 LVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPV  155 (292)
T ss_pred             EeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC-cEEecccchhhhcCCce
Confidence            9999999 8998888654432    2233455999999999999999999999999999887 222              


Q ss_pred             --------------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          136 --------------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       136 --------------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                .+|+||.|||++|+.. |++.|.+.+-.+++..++..+|.|..+.|+++...++
T Consensus       156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd  235 (292)
T KOG0662|consen  156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD  235 (292)
T ss_pred             EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence                                      2459999999999986 8999999999999999999999999999999999988


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      +...-.-.....+..+.+.++..-+|+++++|..+|..|++|+++++||+|.+..+
T Consensus       236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s~  291 (292)
T KOG0662|consen  236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFSP  291 (292)
T ss_pred             CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccCC
Confidence            75433333334577888899999999999999999999999999999999998764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-46  Score=304.84  Aligned_cols=206  Identities=22%  Similarity=0.346  Sum_probs=177.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +|+..+.||+|||+.||.+++.. +  ++.||+|+    ........+.+.+||++.+.|+|||||++    ++.+++|+
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~-t--ge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLD-T--GEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcC-C--CcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence            59999999999999999999977 6  88999999    34477788999999999999999999998    88999999


Q ss_pred             EEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           75 IFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      |+|+|..++|..++++.   .+..+.-++.||+.||.|||+++|+|||||..|++++. .+..|+.|             
T Consensus        96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~-~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen   96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE-NMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC-cCcEEecccceeeeecCcccc
Confidence            99999999999999743   35555556669999999999999999999999999994 44566655             


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                |||+||++|-|+.|++||...+-.+.+..+...--                   
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y-------------------  235 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY-------------------  235 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc-------------------
Confidence                                      99999999999999999998766666665555210                   


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                ..+..+|.+++|||++||+.||.+|||++++|.|+||+.
T Consensus       236 ----------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  236 ----------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS  274 (592)
T ss_pred             ----------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence                      012478999999999999999999999999999999943

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-46  Score=278.20  Aligned_cols=211  Identities=22%  Similarity=0.319  Sum_probs=176.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +.|++.+.||+|.|+.|++|.+.. +  ++.+++|+   ...+....+.+.+|++|.+.|+||||+++    .+....|+
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~-t--g~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKT-T--GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhcc-c--hHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            468999999999999999999887 6  88888887   33445577899999999999999999999    56789999


Q ss_pred             EEeccCcccHHH-HHhh--hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRK-VIKN--FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~-~~~~--~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |+|++.|++|.. .+++  +++...+-++.||+.||.|+|.+||||||+||+|+++-+..                    
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence            999999999964 4444  34556666777999999999999999999999999987654                    


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh-CCCCcCcCCCCCCccccc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM-GEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  190 (246)
                                          ...+-+|||+.|++++-++.|.+||.+.+..+.+..|.... ..+.+             
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~-------------  234 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSP-------------  234 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCc-------------
Confidence                                12333569999999999999999999988887777776631 11111             


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                   .|+.+++++++|+++||..||++|+|+.|+|+|||+.+
T Consensus       235 -------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  235 -------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             -------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence                         23689999999999999999999999999999999986

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=9.3e-45  Score=290.09  Aligned_cols=234  Identities=30%  Similarity=0.505  Sum_probs=188.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      |++|++.++||+|+||.||+|++.. +  +..||+|...  ........+.+|+.+++.++||||+++    ...+..++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKL-T--ENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECC-C--CCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            5789999999999999999999877 5  7788999722  223345577899999999999999998    55678999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ||||++ ++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++ ..++              
T Consensus        81 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~-~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          81 VFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG-ELKLADFGLARAKSVPTK  158 (288)
T ss_pred             EEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-CEEECcCcceeeccCCCc
Confidence            999999 699988865321    12233445999999999999999999999999998765 1222              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+||++++|++|.+||.+.+..+....+....+.|..+.|++......+.
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR  238 (288)
T ss_pred             cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence                                      459999999999999999999988888888899999999998888766554433


Q ss_pred             cc-cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YC-YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .. ++...........+.++++++||+++||+.||.+|||++|+++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            21 22222233333456789999999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.5e-45  Score=303.34  Aligned_cols=236  Identities=25%  Similarity=0.331  Sum_probs=189.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-C-----CceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-Y-----PLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~-----~~i~~~----~~~~~~   72 (246)
                      +|++++.||+|+||+|-+|.+.. +  ++.||||+.........+.+.|+.+|..|+ |     -|+|++    ..++++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~-T--~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHK-T--GEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEecccccceeEEEEecC-C--CcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            68999999999999999999988 6  899999997777778888999999999997 4     378888    668999


Q ss_pred             EEEEeccCcccHHHHHhhhcccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEE---------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIA---------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~---------  137 (246)
                      |||+|.++ .+|.++++++...+++...+     ||+.||..||+.||||.||||||||+..-+ ..+|++         
T Consensus       264 ciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  264 CIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             eeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence            99999999 99999999877666554433     999999999999999999999999987554 234444         


Q ss_pred             ---------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          138 ---------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 ||||||||++||++|.+.|.+.++.+|++.|.+.+|.|+++..........|.
T Consensus       343 q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff  422 (586)
T KOG0667|consen  343 QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFF  422 (586)
T ss_pred             CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceeh
Confidence                                       49999999999999999999999999999999999999987544222221110


Q ss_pred             cc-------cCCC--------------------------CcchhhhhCC-CCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          191 YC-------YEES--------------------------EPKDLAILLP-DLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       191 ~~-------~~~~--------------------------~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ..       ...+                          ....+..... .-...+.||+.+||..||.+|+|+.++|+|
T Consensus       423 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H  502 (586)
T KOG0667|consen  423 TSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH  502 (586)
T ss_pred             hccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            00       0000                          0011111112 233568999999999999999999999999


Q ss_pred             CCCcCC
Q 036362          237 HYYRDV  242 (246)
Q Consensus       237 ~~~~~~  242 (246)
                      |||...
T Consensus       503 pfl~~~  508 (586)
T KOG0667|consen  503 PFLTGT  508 (586)
T ss_pred             cccccc
Confidence            999953

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.4e-44  Score=292.40  Aligned_cols=214  Identities=18%  Similarity=0.303  Sum_probs=180.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|+++..||+|+||.||+|+.+. +  +..+|+|+    ..........+..|-.+|...++|+||++    .+..++
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~-T--g~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKD-T--GEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cccchhheeeccccceeEEEEEEcc-C--CcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            4799999999999999999999988 7  88899988    44555677889999999999999999998    778999


Q ss_pred             EEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ||||||++|||+..++.+.   .+.....++++++.|+..+|++|+|||||||+|+|+|..|                  
T Consensus       217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~  296 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR  296 (550)
T ss_pred             EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence            9999999999999999763   3556666777999999999999999999999999999888                  


Q ss_pred             -------------------------------------------------------------------CeeeEEEeehhhH
Q 036362          132 -------------------------------------------------------------------YTVKIARLISVGC  144 (246)
Q Consensus       132 -------------------------------------------------------------------~~~~~~Di~slG~  144 (246)
                                                                                         ...+.+|.|||||
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~  376 (550)
T KOG0605|consen  297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC  376 (550)
T ss_pred             hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence                                                                               1233345899999


Q ss_pred             HHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCC
Q 036362          145 IFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNP  224 (246)
Q Consensus       145 i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp  224 (246)
                      |+|||+.|.+||.+.+..+....+..-.-.         -.       ++.         ....+++++|||.+||. ||
T Consensus       377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~---------l~-------fP~---------~~~~s~eA~DLI~rll~-d~  430 (550)
T KOG0605|consen  377 IMYEMLVGYPPFCSETPQETYRKIVNWRET---------LK-------FPE---------EVDLSDEAKDLITRLLC-DP  430 (550)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhhh---------cc-------CCC---------cCcccHHHHHHHHHHhc-CH
Confidence            999999999999999888877777662100         00       110         13577999999999998 99


Q ss_pred             CCCCC---HHHHhcCCCCcCCC
Q 036362          225 KERIT---VNDALNHHYYRDVV  243 (246)
Q Consensus       225 ~~R~s---~~e~l~h~~~~~~~  243 (246)
                      ..|..   ++||-+||||+++.
T Consensus       431 ~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  431 ENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             HHhcCcccHHHHhcCCccccCC
Confidence            99995   99999999999974

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-44  Score=284.97  Aligned_cols=221  Identities=16%  Similarity=0.203  Sum_probs=181.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||.|..++||+|+... +  +..||||.  ..........+.+|+..++.++||||+++    ..+..+|+|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p-~--~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIP-T--NEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecc-c--CCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            689999999999999999999988 6  78999999  22233336899999999999999999998    678899999


Q ss_pred             EeccCcccHHHHHhhhcccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |+|+.+||+.++++.....++.+..+     +++.||.|||.+|.||||||+.|||++.+|                   
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R  182 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR  182 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence            99999999999998877666766555     999999999999999999999999999988                   


Q ss_pred             --------------CeeeE-----------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 --------------YTVKI-----------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 --------------~~~~~-----------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                    ++|++           +||||||+++.|+..|..||........+..-..  +.|+.-.... ...
T Consensus       183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~pp~~~t~~-~~~  259 (516)
T KOG0582|consen  183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--NDPPTLLTSG-LDK  259 (516)
T ss_pred             eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CCCCCccccc-CCh
Confidence                          34444           6799999999999999999998777655443333  4443211111 000


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                      +.....+..+++++..||.+||++||||+++|+|+||+....
T Consensus       260 ----------------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  260 ----------------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             ----------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence                            011456789999999999999999999999999999998654

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=6.2e-44  Score=271.75  Aligned_cols=240  Identities=28%  Similarity=0.460  Sum_probs=193.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccc--hhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe-----cCCc
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENA--YQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDK   70 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~--~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~   70 (246)
                      |..|+++..||+|+||.||+|..++ +..  .+.+|+|.   .....+......+|+.+++.++||||+.+     ..+.
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~-~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKN-TNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHhhccceecccccceeeEeeecc-CCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            3579999999999999999997766 322  33789988   33345778899999999999999999998     4588


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCC---Cee-----
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSD---YTV-----  134 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---~~~-----  134 (246)
                      .+++++||++ .||...|.-.+   ...++..++     ||++|+.|||++-|+|||+||.|||+..+|   ..+     
T Consensus       102 ~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  102 KVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             eEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence            9999999999 99999996543   123333333     999999999999999999999999999884   123     


Q ss_pred             --------------------------------------eEEEeehhhHHHHHHhhCCCCCCCCc---------chHHHHH
Q 036362          135 --------------------------------------KIARLISVGCIFAEMVIQEPLSEDAS---------ESRERIS  167 (246)
Q Consensus       135 --------------------------------------~~~Di~slG~i~~~l~~g~~~~~~~~---------~~~~~~~  167 (246)
                                                            +.+|+|+.|||++||++-.+.|.+..         ..+++.+
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r  260 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR  260 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence                                                  33459999999999999999887532         3568999


Q ss_pred             HHHhhCCCCcCcCCCCCCcccccc---ccC--CCC---cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          168 IFRLMGEPSEETLPGVTTFFPFIY---CYE--ESE---PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~---~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      |++.+|.|+...|+.+...+.+..   .+.  .+.   ...+....+.-++...+|+.+||++||.+|.|++++|+|+||
T Consensus       261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF  340 (438)
T KOG0666|consen  261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF  340 (438)
T ss_pred             HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence            999999999999999998887721   111  111   122334445567779999999999999999999999999999


Q ss_pred             cCC
Q 036362          240 RDV  242 (246)
Q Consensus       240 ~~~  242 (246)
                      .+-
T Consensus       341 ~~d  343 (438)
T KOG0666|consen  341 TED  343 (438)
T ss_pred             ccC
Confidence            875

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-44  Score=270.12  Aligned_cols=210  Identities=20%  Similarity=0.309  Sum_probs=181.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|++++.||.|+||.|.+++.+. +  +..+|+|+    ......+.++..+|.++|+.+.||+++++    .+..++
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~-~--g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~l  119 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKH-S--GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNL  119 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEcc-C--CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeE
Confidence            5789999999999999999999988 6  78888888    22333456788999999999999999998    678899


Q ss_pred             EEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      |+||||.+||.|.+++.+   +++.....+++||+.||+|||+++|++||+||+|||+|.+| ..+++|           
T Consensus       120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G-~iKitDFGFAK~v~~rT  198 (355)
T KOG0616|consen  120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG-HIKITDFGFAKRVSGRT  198 (355)
T ss_pred             EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC-cEEEEeccceEEecCcE
Confidence            999999999999999975   55777777888999999999999999999999999999888 444444           


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               -||||+++|||+.|.+||.+.+....+.+|.+.-           ..        
T Consensus       199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~-----------v~--------  259 (355)
T KOG0616|consen  199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK-----------VK--------  259 (355)
T ss_pred             EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc-----------cc--------
Confidence                                     8999999999999999999999988888888721           00        


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                .++-++++++||++++|+.|-++|.     ...++.+||||+++.
T Consensus       260 ----------fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  260 ----------FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             ----------CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence                      1256899999999999999999994     678999999999863

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=4.3e-43  Score=282.44  Aligned_cols=239  Identities=28%  Similarity=0.430  Sum_probs=181.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|....  .......+.+|+.+++.++||||+++    ......++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKV-N--GKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECC-C--CCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence            689999999999999999999976 5  77889998322  22334567889999999999999987    567789999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      |||++ ++|.+++....    ...+..+..|++.||.|||++||+||||||+|||++.++ ..+                
T Consensus        82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~  159 (303)
T cd07869          82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG-ELKLADFGLARAKSVPSHT  159 (303)
T ss_pred             EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEECCCCcceeccCCCcc
Confidence            99998 78888876532    222333444999999999999999999999999998665 111                


Q ss_pred             ------------------------EEEeehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          136 ------------------------IARLISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       136 ------------------------~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                              .+|+||+||++++|++|..||.+..+ ......+....+.+....+++....+.+.
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (303)
T cd07869         160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK  239 (303)
T ss_pred             CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence                                    24699999999999999999987544 34666677777887777776654433221


Q ss_pred             cc-cCCCCcchhhhhC--CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          191 YC-YEESEPKDLAILL--PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       191 ~~-~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                      .. ............+  ...++++.+|+++||+.||++|||+.|+++||||++++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~  297 (303)
T cd07869         240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPR  297 (303)
T ss_pred             cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChh
Confidence            11 1111111111111  2356889999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-43  Score=287.08  Aligned_cols=208  Identities=23%  Similarity=0.305  Sum_probs=172.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-----C-CCCcchhhhhhcccccCC-CCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-----P-DGVPISILTKISPLKEMD-YPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-----~-~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||+|+.|.+.. +  +..||+|+...     . ......+.+|+.+++.++ ||||+++    ....
T Consensus        17 g~y~~~~~lG~GsfgkV~~a~~~~-t--~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   17 GKYELGRTLGSGSFGKVKLAKHRL-T--GEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             CceeeeeeecCCCCeeEEEeeecc-C--CCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            589999999999999999999987 6  78899997211     1 145667779999999998 9999998    5667


Q ss_pred             eEEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC-C---------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS-D---------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~-~---------------  131 (246)
                      +.++||||+.||+|.+++.+.   .+..+..++.|+++|++|||++||+||||||+|+|++.+ +               
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~  173 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG  173 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence            799999999999999999772   233444455599999999999999999999999999988 4               


Q ss_pred             -------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 -------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 -------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                               +.++.+|+||+|+++|.|++|+.||...+....+..+...  .         .. 
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~--~---------~~-  241 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG--E---------FK-  241 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC--C---------cc-
Confidence                                     3345566999999999999999999997766666654441  0         00 


Q ss_pred             cccccccCCCCcchhhhhCCCC-ChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDL-EPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                       .+..+ |+++++|+++||..||.+|+|+.++++||||+.
T Consensus       242 -----------------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  242 -----------------IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             -----------------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                             11334 999999999999999999999999999999996

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=8.7e-43  Score=281.38  Aligned_cols=239  Identities=32%  Similarity=0.542  Sum_probs=188.4

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +++|++.+.||+|+||.||+|++.. +  +..+|+|...  ........+.+|+.+++.++||||+++    ...+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   81 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKL-T--ENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL   81 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecC-C--CCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence            5789999999999999999999877 5  7788999722  223334567889999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ||||++ ++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++              
T Consensus        82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          82 VFEYLD-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSVPTK  159 (309)
T ss_pred             EEeCCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-CEEECccccceecCCCcc
Confidence            999999 688888755321    12223344999999999999999999999999998665 2222              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+||++++|++|+.||.+.+..+....+....+.|....|+.......+.
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK  239 (309)
T ss_pred             ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence                                      459999999999999999999888888888899999988887776654432221


Q ss_pred             -cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          191 -YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       191 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                       ...+...........+.+++++++|+.+||..||.+|||+.|+++||||+.+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  294 (309)
T cd07872         240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT  294 (309)
T ss_pred             hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence             122222222233344578999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.9e-42  Score=276.90  Aligned_cols=233  Identities=28%  Similarity=0.461  Sum_probs=180.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccC---CCCceEEe---------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEM---DYPLIFRK---------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l---~~~~i~~~---------   66 (246)
                      ++|++.+.||+|+||.||+|++..++  +..+|+|...   ..........+|+.+++.+   +||||+++         
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCC--CeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence            58999999999999999999986534  6678888722   2223334566777776665   69999987         


Q ss_pred             cCCceEEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------
Q 036362           67 ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------  131 (246)
                      ......+++|||++ ++|.+++.......+.     .+..|++.||.|||++||+||||||+|||++.++          
T Consensus        79 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T cd07862          79 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  157 (290)
T ss_pred             CCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence            13457899999998 7999998764433333     3344999999999999999999999999998665          


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                 .....+|+||+||++++|++|.+||.+....+.+..+....+.|.+..++...
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~  237 (290)
T cd07862         158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  237 (290)
T ss_pred             EeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhh
Confidence                                       01123579999999999999999999988888888898888888777665543


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .....  .+............+.+++.+.+|+.+||+.||++|||+.|+|+||||
T Consensus       238 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         238 ALPRQ--AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             cccch--hccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            32221  122223334445556789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-42  Score=283.89  Aligned_cols=238  Identities=26%  Similarity=0.407  Sum_probs=182.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe---------cCCc
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK---------ENDK   70 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~   70 (246)
                      +|++.++||+|+||.||+|.+.. +  +..||+|...   ........+.+|+.+++.++||||+++         ....
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   77 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTH-T--GEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK   77 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECC-C--CCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence            69999999999999999999977 5  7889999722   122334568899999999999999987         1124


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ..|+||||++ ++|.+++....   ......++.||+.||.|||++||+||||||+|||++.++                
T Consensus        78 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  156 (338)
T cd07859          78 DIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND  156 (338)
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence            5899999998 79999886542   222233444999999999999999999999999998765                


Q ss_pred             ----------------Cee-----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ----------------YTV-----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ----------------~~~-----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                      .+|           ..+|+||+||++++|++|++||.+.+...+...+....|.|.......+.
T Consensus       157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~  236 (338)
T cd07859         157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR  236 (338)
T ss_pred             cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence                            011           13579999999999999999999888877888888888887765444332


Q ss_pred             Ccc--ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          185 TFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       185 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ...  .+................+..++.+.+++.+||..||++|||++|+++||||+++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            211  111111122222233444678899999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.4e-43  Score=275.31  Aligned_cols=213  Identities=19%  Similarity=0.277  Sum_probs=177.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|+++++||+|.-|+||+|+... +  ...+|+|+    ...+.....+.+.|-+||+.++||.+..+    +..+..
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~-t--~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRG-T--NCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecC-C--CceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            3578999999999999999999988 5  67889998    23334456678889999999999999988    778999


Q ss_pred             EEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      |++||||+||+|..+.++.....+.+     +++.++-||+|||-+|||+|||||+|||+..+|                
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            99999999999999998766555544     444999999999999999999999999999888                


Q ss_pred             ---------------------------------------------------------------------CeeeE------
Q 036362          132 ---------------------------------------------------------------------YTVKI------  136 (246)
Q Consensus       132 ---------------------------------------------------------------------~~~~~------  136 (246)
                                                                                           .+|++      
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                                                                 11111      


Q ss_pred             ---EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHH
Q 036362          137 ---ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV  213 (246)
Q Consensus       137 ---~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (246)
                         .|.|+||+++|||+.|..||.+.+..+.+..+...   +.               .++..         +.++-.++
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~---~l---------------~Fp~~---------~~vs~~ak  365 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ---PL---------------KFPEE---------PEVSSAAK  365 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC---CC---------------cCCCC---------CcchhHHH
Confidence               22799999999999999999999887776666552   10               01111         36788999


Q ss_pred             HHHHHhhhcCCCCCCC----HHHHhcCCCCcCCC
Q 036362          214 DLLQKMLRVNPKERIT----VNDALNHHYYRDVV  243 (246)
Q Consensus       214 ~ll~~~l~~dp~~R~s----~~e~l~h~~~~~~~  243 (246)
                      |||+++|.+||++|+.    |.||-+||||++++
T Consensus       366 DLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  366 DLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             HHHHHHhccChhhhhccccchHHhhcCccccCCC
Confidence            9999999999999998    99999999999984

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-42  Score=273.66  Aligned_cols=210  Identities=23%  Similarity=0.355  Sum_probs=164.3

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-CCCcchhhhhhcccccCCCCceEEe-c---CCc--eEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-DGVPISILTKISPLKEMDYPLIFRK-E---NDK--LVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~-~---~~~--~~~lv   75 (246)
                      ++...+.||+|+||.||++.+.+ +  +...|+|..... ....+.+.+|+.+|.+++|||||++ .   ...  .++++
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~-~--g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKK-T--GELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             hhhhhccccCccceEEEEEEecC-C--CcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence            47788999999999999999987 5  788899982211 1115668999999999999999999 1   222  69999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC-C-------------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS-D-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~-~-------------------  131 (246)
                      |||+++|+|.+++.+..    +..+..+++||+.||.|||++||+|+||||+|||++.. +                   
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence            99999999999998753    33445555599999999999999999999999999983 4                   


Q ss_pred             -------------------C----eeeEEEeehhhHHHHHHhhCCCCCCCC-cchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 -------------------Y----TVKIARLISVGCIFAEMVIQEPLSEDA-SESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 -------------------~----~~~~~Di~slG~i~~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                         .    ..+.+|+||+||++.||++|..||... ......-.+...   .            
T Consensus       175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~---~------------  239 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE---D------------  239 (313)
T ss_pred             ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc---C------------
Confidence                               0    112567999999999999999999863 222222222211   0            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  .....+..+|+++++|+.+|+..||..||||.++|+|||.++.
T Consensus       240 ------------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  240 ------------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             ------------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence                        0012236789999999999999999999999999999999763

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.2e-42  Score=292.36  Aligned_cols=234  Identities=22%  Similarity=0.396  Sum_probs=176.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe------------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK------------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------------~~~   69 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..||+|....   ......+|+.+++.++||||+++            ...
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~-~--~~~vAiK~i~~---~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICID-T--SEKVAIKKVLQ---DPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECC-C--CCEEEEEEEec---CcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            469999999999999999999877 5  77899997322   22345679999999999999986            112


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----  138 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----  138 (246)
                      ..+++||||++ ++|.+++....  ...+     ..+..||+.||.|||++||+||||||+|||++.++...+++|    
T Consensus       140 ~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        140 IFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             eEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            35779999999 68877765321  1122     233449999999999999999999999999986653344444    


Q ss_pred             -----------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          139 -----------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       139 -----------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                         +||+||++++|++|.+||.+....+++..+...+|.|..+.+...
T Consensus       219 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~  298 (440)
T PTZ00036        219 KNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM  298 (440)
T ss_pred             hhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence                                               999999999999999999998888888888888888776544322


Q ss_pred             CCccccccccCCCCcchhhh-hCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          184 TTFFPFIYCYEESEPKDLAI-LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ..... ...++......+.. .+...++++.+|+.+||++||.+|||+.|+|+||||+++.
T Consensus       299 ~~~~~-~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        299 NPNYA-DIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             chhhh-cccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            11100 00111112222222 2345789999999999999999999999999999998764

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=7e-42  Score=273.28  Aligned_cols=235  Identities=22%  Similarity=0.312  Sum_probs=173.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.+|+|...   ........+.+|+.+++.++||||+++    ...+..++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKE-T--KEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYL   77 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECC-C--CcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEE
Confidence            589999999999999999999987 5  7788998732   223345677899999999999999998    56778999


Q ss_pred             EEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ||||++++++..+....   .......+..|++.||.|||++||+||||||+||+++.++                    
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          78 VFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence            99999976665544321   1122233444999999999999999999999999998665                    


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc-
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY-  191 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  191 (246)
                                         .....+|+||+||++++|++|++||.+.+..+....+....+..+...+......+.+.. 
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence                               011235699999999999999999998877777666766666554433222111111100 


Q ss_pred             ccC--CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYE--ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~--~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ..+  .............+|+++.+|+++||+.||++|||++|+|+||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            000  000111122234578999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.4e-41  Score=273.36  Aligned_cols=239  Identities=29%  Similarity=0.482  Sum_probs=186.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +++|++.+.||+|+||.||+|++.. +  +..||+|...  ........+.+|+.+++.++||||+++    ...+..++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKL-T--DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcC-C--CcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence            5789999999999999999999876 5  6788888722  223334567889999999999999998    56778999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      ||||++ ++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                   
T Consensus        82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (301)
T cd07873          82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  160 (301)
T ss_pred             EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence            999999 799888865321    12233444999999999999999999999999998765                   


Q ss_pred             ----------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc-
Q 036362          132 ----------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI-  190 (246)
Q Consensus       132 ----------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  190 (246)
                                .          ....+|+||+||++++|++|++||...+..++...+....+.+....|+.......+. 
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS  240 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence                      0          0113579999999999999999999888778888888888888777666543322221 


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...+...........+.+++.+++|+.+||..||.+|||++|+++||||+.+-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            11222222223333457899999999999999999999999999999998763

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-42  Score=282.97  Aligned_cols=212  Identities=22%  Similarity=0.306  Sum_probs=180.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ..|...++||+|+.|.||.|+... +  ++.||+|. ........+-+.+|+.+|+..+|+|||.+    -.++.+|+||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~-~--~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM  349 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKIS-T--KQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM  349 (550)
T ss_pred             hhhcchhhhccccccceeeeeecc-C--CceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence            468888999999999999999988 5  67799998 55556667789999999999999999998    3458899999


Q ss_pred             eccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           77 EYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      ||++||+|.+.+...  .+..+..+.+.++.||+|||.+||+|||||.+|||++.+| ..|++|                
T Consensus       350 Eym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g-~vKltDFGFcaqi~~~~~KR~T  428 (550)
T KOG0578|consen  350 EYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG-SVKLTDFGFCAQISEEQSKRST  428 (550)
T ss_pred             eecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC-cEEEeeeeeeeccccccCcccc
Confidence            999999999999764  3556666666999999999999999999999999999887 344444                


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                             |||||+++.||+-|.+||-..+...++..+... |.|.-                  
T Consensus       429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~l------------------  489 (550)
T KOG0578|consen  429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKL------------------  489 (550)
T ss_pred             ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCc------------------
Confidence                                   999999999999999999988887777777763 33221                  


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                             ..+..+|+.++|||.+||+.|+.+|+||.|||+||||+-..
T Consensus       490 -------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~  530 (550)
T KOG0578|consen  490 -------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK  530 (550)
T ss_pred             -------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence                   11257899999999999999999999999999999997543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.4e-42  Score=283.84  Aligned_cols=211  Identities=22%  Similarity=0.305  Sum_probs=179.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +-|++.+.||+|+.|.|.+|++.. +  |+..|||+    ...+......+.+||-+|+.+.||||+.+    ++..++|
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~-T--GqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAE-T--GQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             cceeccccccCCCCceehhhhccc-c--cceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence            468899999999999999999988 6  88999998    24456678899999999999999999998    7788999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      +|.||++||.|++++-...   +.....+..||+.|+.|||..+|+|||+||+|+|+|..+. +|++|            
T Consensus        89 lvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n-IKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN-IKIADFGMASLEVPGKL  167 (786)
T ss_pred             EEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC-EeeeccceeecccCCcc
Confidence            9999999999999996532   4444455559999999999999999999999999997773 55555            


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                 +||+|+|++.|++|..||.+.+-...+.++.+.  .                 
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G--~-----------------  228 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG--V-----------------  228 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC--c-----------------
Confidence                                       999999999999999999976655555555541  1                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                                .+.+.+++++++|||++||..||++|+|.+|++.|||+......
T Consensus       229 ----------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  229 ----------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             ----------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence                      11125789999999999999999999999999999999987654

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-42  Score=255.58  Aligned_cols=210  Identities=23%  Similarity=0.363  Sum_probs=179.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|.||.||.|+.+. +  .-.||+|+    .........++.+|+++.+.|+||||.++    -+....
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekk-s--~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri   97 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKK-S--LFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI   97 (281)
T ss_pred             hhhccccccccCCccccEeEeeecc-C--CcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence            5789999999999999999999987 5  67788888    44555667899999999999999999998    677899


Q ss_pred             EEEEeccCcccHHHHHhh-----hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           73 YQIFEYTGLLNLRKVIKN-----FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      |+++||..+|++...+..     +.+.....+..|++.||.|+|.++|+||||||+|+|++..+                
T Consensus        98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~  177 (281)
T KOG0580|consen   98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN  177 (281)
T ss_pred             EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence            999999999999999873     44556666777999999999999999999999999999887                


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                          ...+..|+|++|++.+|++.|.+||......+.+..+.+..-.                 
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~-----------------  240 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLK-----------------  240 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcccc-----------------
Confidence                                1122344999999999999999999988877777777774211                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  .+..++.++.|+|.+||..+|..|++..|+++|||+...
T Consensus       241 ------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  241 ------------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             ------------CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence                        015789999999999999999999999999999998754

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=4.1e-41  Score=269.78  Aligned_cols=242  Identities=44%  Similarity=0.727  Sum_probs=196.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|++.+.||+|++|.||+|.+.. +  ++.|++|....   .......+.+|+.+++.++|+||+++    ......+
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRV-T--NETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLY   77 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecC-C--CcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEE
Confidence            6899999999999999999999876 5  77889987322   12334568889999999999999998    5678999


Q ss_pred             EEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      +||||++ ++|.+++........     ...+.||+.||.|||++|++||||||+||+++.++...++            
T Consensus        78 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         78 LVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             EEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            9999998 688888755332222     2334499999999999999999999999999854422222            


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||+||++++|++|.+||....+.+....+....+.|....|.+....+.
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD  236 (294)
T ss_pred             ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence                                        4599999999999999999998888888888888889998888887776666


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP  246 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  246 (246)
                      +....+.+.........+..++++.+++.+||..||++|||+.++++||||.++...|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~~~  294 (294)
T PLN00009        237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDAP  294 (294)
T ss_pred             hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhcCC
Confidence            6544554444444455577899999999999999999999999999999999987765

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=272.67  Aligned_cols=209  Identities=21%  Similarity=0.301  Sum_probs=168.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....    .......+.+|+.+++.++||||+++    .+.+..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   77 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRI-S--EHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLY   77 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcC-C--CCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEE
Confidence            589999999999999999999987 5  77899998321    12234568889999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---------------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---------------  135 (246)
                      +||||+++++|.+++....   +.....+..|++.||.|||++||+||||||+|||++.++ ..+               
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~-~~kl~Dfg~~~~~~~~~~  156 (291)
T cd05612          78 MLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG-HIKLTDFGFAKKLRDRTW  156 (291)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-CEEEEecCcchhccCCcc
Confidence            9999999999999987542   222233445999999999999999999999999998765 222               


Q ss_pred             ---------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          136 ---------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       136 ---------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                           .+|+||+||++++|++|..||...........+...  .+                   
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~-------------------  215 (291)
T cd05612         157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--KL-------------------  215 (291)
T ss_pred             cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--Cc-------------------
Confidence                                 357999999999999999999877655544444331  00                   


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                              ..+...++.+++|+++||..||.+||+     ++|+++||||+.+.
T Consensus       216 --------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~  261 (291)
T cd05612         216 --------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD  261 (291)
T ss_pred             --------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence                    012456889999999999999999995     99999999998753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=9.7e-41  Score=266.76  Aligned_cols=231  Identities=31%  Similarity=0.495  Sum_probs=177.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccC---CCCceEEe---------c
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEM---DYPLIFRK---------E   67 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l---~~~~i~~~---------~   67 (246)
                      +|++.+.||+|+||.||+|++.. +  ++.||+|...   ..........+|+.+++.+   +||||+++         .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~   77 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPH-S--GHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD   77 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECC-C--CcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence            59999999999999999999987 5  7788888722   2223334566787777665   69999998         1


Q ss_pred             CCceEEEEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------  131 (246)
                      .....++++||++ ++|.+++.......+     ..++.|++.||.|||++|++||||||+||+++.++           
T Consensus        78 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863          78 RETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             CCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence            2356899999999 699888866433223     33444999999999999999999999999998665           


Q ss_pred             --------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 --------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 --------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                .....+|+||+||++++|++|.+||.+.........+....+.+....++....
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07863         157 IYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT  236 (288)
T ss_pred             cccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence                                      011235799999999999999999998888888888888888877666654322


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ....  .+............+.+++.+.+|+.+||+.||++|||+.|+++||||
T Consensus       237 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         237 LPRG--AFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cccc--ccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            2111  122223333445556789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=9.9e-42  Score=267.88  Aligned_cols=214  Identities=24%  Similarity=0.353  Sum_probs=171.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|.+.+.||.|+||+||+|+++. +  +..||||....   .....+.+..||.+|+.++|||||.+    ..++++|
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~-~--~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKK-S--GTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             cccceehhhccCcceEEEEEeEecc-C--CceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            3689999999999999999999988 6  78899998222   33456678899999999999999998    7788999


Q ss_pred             EEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC-C----CeeeEEE-------
Q 036362           74 QIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS-D----YTVKIAR-------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~-~----~~~~~~D-------  138 (246)
                      +|||||+||||.+|+.+.   ++......+.||+.||++||+++||||||||+|||++.. +    ...|++|       
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            999999999999999875   244555555599999999999999999999999999875 2    1234444       


Q ss_pred             -------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          139 -------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       139 -------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                     +||+|+++|++++|++||...+..+.+..+...-..             
T Consensus       166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~-------------  232 (429)
T KOG0595|consen  166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI-------------  232 (429)
T ss_pred             CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc-------------
Confidence                                           999999999999999999987776655533331100             


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                   ........+....+|+...|+.+|..|.+..+-+.|++...-+
T Consensus       233 -------------~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  233 -------------VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             -------------cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence                         0011134567777899999999999999999999998876643

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-41  Score=275.40  Aligned_cols=210  Identities=18%  Similarity=0.224  Sum_probs=167.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|...    ........+.+|+.+++.++||||+++    ...+..
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   93 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKG-T--GEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV   93 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECC-C--CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence            4689999999999999999999987 5  7788999722    122344578899999999999999988    567899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +++|||+.+++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++                  
T Consensus        94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  173 (329)
T PTZ00263         94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF  173 (329)
T ss_pred             EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence            99999999999999987542   222233445999999999999999999999999998766                  


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                       .....+|+|||||++++|++|..||.+.........+...  ..                   
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~-------------------  232 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RL-------------------  232 (329)
T ss_pred             eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--Cc-------------------
Confidence                             0123367999999999999999999876654444433321  00                   


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDV  242 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~  242 (246)
                              ..+..+++.+++|+.+||+.||.+||+     ++++++||||++.
T Consensus       233 --------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        233 --------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence                    011346789999999999999999997     7999999999874

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=6e-41  Score=267.51  Aligned_cols=233  Identities=33%  Similarity=0.559  Sum_probs=187.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|++|.||+|+... +  +..|++|....   .......+.+|+.+++.++||||+++    ..+...++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKK-T--GQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLI   77 (285)
T ss_pred             CceEeeEecccCceEEEEEEECC-C--CcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEE
Confidence            68999999999999999999876 5  77889987322   22334678899999999999999998    567889999


Q ss_pred             EeccCcccHHHHHhhhcc-cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD-IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~-~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      |||++ ++|.+++..... ..+..     +..|++.||.|||++|++||||||+||+++.++                  
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          78 FEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             EecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence            99999 789888864321 22222     344999999999999999999999999998665                  


Q ss_pred             -----------Ce----------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 -----------YT----------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 -----------~~----------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                 .+          ...+|+||+||++++|++|++||.+.........+.+..+.+....|........+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK  236 (285)
T ss_pred             cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence                       00          112569999999999999999999888877777778877877777777666555555


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .....+...........+++++.+|+++||..||++|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            4455544444555566789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-42  Score=272.42  Aligned_cols=211  Identities=19%  Similarity=0.265  Sum_probs=171.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-----------CC----CCCcchhhhhhcccccCCCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----------IP----DGVPISILTKISPLKEMDYPLIFR   65 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----------~~----~~~~~~~~~E~~~l~~l~~~~i~~   65 (246)
                      |+.|++.+.||+|.||+|.+|++.. .  ++.||+|+..           ..    -...+...+||.+|++++|||||+
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~-~--~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEV-D--GKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecC-C--CcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            5789999999999999999999987 6  8899999811           11    112257889999999999999999


Q ss_pred             e------cCCceEEEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE
Q 036362           66 K------ENDKLVYQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI  136 (246)
Q Consensus        66 ~------~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~  136 (246)
                      +      ...+++|||+|||..|.+...-..   ..+.....+.++++.||.|||.+||+||||||+|+|++.+| ..|+
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g-~VKI  251 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG-TVKI  251 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC-cEEe
Confidence            8      456899999999997776433221   22345566777999999999999999999999999999887 3444


Q ss_pred             ------------------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHH
Q 036362          137 ------------------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISI  168 (246)
Q Consensus       137 ------------------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~  168 (246)
                                                                      +|+||+||++|.|+.|+.||-+....+.+.+|
T Consensus       252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI  331 (576)
T KOG0585|consen  252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI  331 (576)
T ss_pred             eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence                                                            44999999999999999999998888887777


Q ss_pred             HHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          169 FRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ...--.                  ++.         .+...+.++|||.+||.+||..|++..++..|||...-
T Consensus       332 vn~pL~------------------fP~---------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  332 VNDPLE------------------FPE---------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hcCccc------------------CCC---------cccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            662100                  111         13578999999999999999999999999999998654

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-41  Score=273.76  Aligned_cols=213  Identities=23%  Similarity=0.328  Sum_probs=176.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      +.|++.+.||.|.||.||.|+.+. +  +..+|+|.....    ......+.+|+.+|+.+. ||||+.+    ++....
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~-t--g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKS-T--GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecC-C--CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            469999999999999999999998 6  888888882211    123468999999999998 9999998    677899


Q ss_pred             EEEEeccCcccHHHHHhh--hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---eeeEEE---------
Q 036362           73 YQIFEYTGLLNLRKVIKN--FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKIAR---------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---~~~~~D---------  138 (246)
                      ++|||++.||.|.+.+..  .++........|++.|+.|||+.||+||||||+|+|+.....   ..+++|         
T Consensus       112 ~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            999999999999999976  444455555559999999999999999999999999876631   344444         


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+|+++|.|+.|.+||.+.++......+...--...             
T Consensus       192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~-------------  258 (382)
T KOG0032|consen  192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFT-------------  258 (382)
T ss_pred             CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCC-------------
Confidence                                         99999999999999999999887776665555211111             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  .+.|+.++..+++|+++||..||.+|+||.++|+|||+++.
T Consensus       259 ------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  259 ------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             ------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence                        11236889999999999999999999999999999999985

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=7.7e-41  Score=267.08  Aligned_cols=212  Identities=16%  Similarity=0.200  Sum_probs=163.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|++.+.||+|+||.||+|.+.. +  ++.||+|....    .......+.+|+.+++.++|++|+++    ...+..++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~l   77 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRA-T--GKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEec-C--CceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEE
Confidence            48899999999999999999977 5  77899997221    12223467889999999999999988    56678999


Q ss_pred             EEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------------  135 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------------  135 (246)
                      +|||+++++|.+++.......+     ..+..|++.||.|||++||+||||||+|||++.++ ..+              
T Consensus        78 v~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~-~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          78 VLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG-HIRISDLGLAVQIPEGE  156 (285)
T ss_pred             EEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC-CEEEeeCCCcEEcCCCC
Confidence            9999999999888754322222     22334999999999999999999999999998655 122              


Q ss_pred             ------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          136 ------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       136 ------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                              .+|+||+||++++|++|+.||...........+.......                
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------------  220 (285)
T cd05631         157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED----------------  220 (285)
T ss_pred             eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc----------------
Confidence                                    2569999999999999999998755432222222211110                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                               .......+++++.+|+++||+.||.+|||     ++++++||||++++
T Consensus       221 ---------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         221 ---------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             ---------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence                     00112467899999999999999999997     89999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=9.7e-43  Score=255.08  Aligned_cols=237  Identities=21%  Similarity=0.355  Sum_probs=187.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CCceEEe------cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YPLIFRK------ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~------~~~~~~~   73 (246)
                      .++|++.+++|.|.|+.||.|.... +  .++++||+  -.+.....+.+|+.+|+.|. +|||+++      .......
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~-~--~eK~ViKi--LKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa  111 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINIT-N--NEKCVIKI--LKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS  111 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccC-C--CceEEEee--echHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence            3689999999999999999999876 5  66778887  33455678999999999996 9999998      4457788


Q ss_pred             EEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      +++||.++.+...+........+..+..+++.||.|||++||+|||+||.|+++|.....-+++|               
T Consensus       112 LiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV  191 (338)
T KOG0668|consen  112 LIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV  191 (338)
T ss_pred             hHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeee
Confidence            99999999999999988888888888999999999999999999999999999997774444444               


Q ss_pred             ------------------------eehhhHHHHHHhhCCCC-CCCCcchHHHHHHHHhhCCCCcCcCC---CCCCccccc
Q 036362          139 ------------------------LISVGCIFAEMVIQEPL-SEDASESRERISIFRLMGEPSEETLP---GVTTFFPFI  190 (246)
Q Consensus       139 ------------------------i~slG~i~~~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  190 (246)
                                              +|||||+++.|+..+.| |.+.++.+|+-++...+|...-....   .+...+.+.
T Consensus       192 RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~  271 (338)
T KOG0668|consen  192 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFE  271 (338)
T ss_pred             eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHh
Confidence                                    99999999999997665 67888999999999998875432111   111111111


Q ss_pred             cccCCCCcchhhhhC-----CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          191 YCYEESEPKDLAILL-----PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ..........+....     .-.++++.||+.++|.+|-..|+||+|++.||||..+
T Consensus       272 ~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  272 DILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             hHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence            111111222222211     2257999999999999999999999999999999864

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.7e-42  Score=280.77  Aligned_cols=207  Identities=26%  Similarity=0.412  Sum_probs=171.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|.+.+.||+|.||.||+|+.+. +  .+.||+|.   ....+.....+.+|+++++.++||||+.+    +...+++
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~-t--~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~   77 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKY-T--IQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLW   77 (808)
T ss_pred             CcchhHHHHhcCCccceeeeccccc-c--eeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEE
Confidence            7899999999999999999999988 6  78899998   23333345568999999999999999998    7789999


Q ss_pred             EEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      +|.||+. |+|..++...   .+.....+..|+++||.|||+++|+|||+||.|||++..+ ..|++|            
T Consensus        78 vVte~a~-g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~-~~KlcdFg~Ar~m~~~t~  155 (808)
T KOG0597|consen   78 VVTEYAV-GDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG-TLKLCDFGLARAMSTNTS  155 (808)
T ss_pred             EEehhhh-hhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC-ceeechhhhhhhcccCce
Confidence            9999999 6999999753   3445555666999999999999999999999999999655 444444            


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                 +||+||++||+++|++||....-.+....|..   .|..              
T Consensus       156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~---d~v~--------------  218 (808)
T KOG0597|consen  156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK---DPVK--------------  218 (808)
T ss_pred             eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---CCCC--------------
Confidence                                       89999999999999999986554444333333   1110              


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                          +        +...+.++++|++.+|.+||..|+|+.+++.|||.++
T Consensus       219 ----~--------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  219 ----P--------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             ----C--------cccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence                0        1468899999999999999999999999999999986

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.8e-41  Score=276.56  Aligned_cols=237  Identities=21%  Similarity=0.237  Sum_probs=174.4

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----c------
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----E------   67 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~------   67 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..||+|...   ........+.+|+.+++.++||||+++    .      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTV-L--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcC-C--CceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence            4689999999999999999999877 5  7889999832   223345677899999999999999998    1      


Q ss_pred             CCceEEEEEeccCcccHHHHHhh-hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKN-FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      .....|+||||++ ++|.+.+.. ........+..|++.||.|||++||+||||||+|||++.++               
T Consensus        97 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~  175 (359)
T cd07876          97 EFQDVYLVMELMD-ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT  175 (359)
T ss_pred             ccceeEEEEeCCC-cCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence            1245799999999 677766643 22333444556999999999999999999999999998765               


Q ss_pred             -------------Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-cc
Q 036362          132 -------------YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-FP  188 (246)
Q Consensus       132 -------------~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  188 (246)
                                   .+|         ..+|+||+||++++|++|..||.+.+.......+.+..+.|........... ..
T Consensus       176 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (359)
T cd07876         176 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN  255 (359)
T ss_pred             CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence                         011         1357999999999999999999988877777777777777654432211100 00


Q ss_pred             cc------------cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          189 FI------------YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       189 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      +.            ...+.+............++++++|+.+||..||++|||+.|+|+||||..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            00            001111111111112345788999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=6.4e-41  Score=273.46  Aligned_cols=212  Identities=14%  Similarity=0.188  Sum_probs=167.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|.+..+.  ...||+|...    ........+.+|+.+++.++||||+++    ...+..
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~  106 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNED--FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL  106 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCC--CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence            368999999999999999999876533  4678888721    223345678889999999999999998    567789


Q ss_pred             EEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++||||+++++|.+++.....   .....+..|++.||.|||++||+||||||+|||++.++                  
T Consensus       107 ~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~  186 (340)
T PTZ00426        107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY  186 (340)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcc
Confidence            999999999999999976421   22233445999999999999999999999999998766                  


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                       .....+|+||+||++++|++|..||...+.......+...  ..                   
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~--~~-------------------  245 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG--II-------------------  245 (340)
T ss_pred             eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC--CC-------------------
Confidence                             0122467999999999999999999876655444443331  00                   


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                              ..+..+++.+.+++++||+.||++|+     |++++++||||++++
T Consensus       246 --------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        246 --------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             --------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence                    01245788999999999999999996     899999999999864

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-40  Score=276.45  Aligned_cols=232  Identities=19%  Similarity=0.206  Sum_probs=169.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++++.||+|+||.||+|.+.. +  ++.||+|..     ....+.+|+.+++.++||||+++    ......++++|
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~-~--~~~vaiK~~-----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNK-T--CEHVVIKAG-----QRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECC-C--CCEEEEech-----hhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            479999999999999999999987 6  788999962     23467899999999999999998    45678999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------------  136 (246)
                      ++. ++|..++....   ......+..||+.||.|||++||+||||||+|||++.++ ..++                  
T Consensus       164 ~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~-~vkL~DFG~a~~~~~~~~~~~~  241 (391)
T PHA03212        164 RYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG-DVCLGDFGAACFPVDINANKYY  241 (391)
T ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC-CEEEEeCCcccccccccccccc
Confidence            998 88988886532   122233444999999999999999999999999998665 2222                  


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCC-------cchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDA-------SESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                            +|+||+||++++|++|..||-..       ....++..+....|.++.+.........
T Consensus       242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~  321 (391)
T PHA03212        242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL  321 (391)
T ss_pred             cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence                                  45999999999999998775432       2234666677777765544322111000


Q ss_pred             c--c---ccc-cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 P--F---IYC-YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~--~---~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .  +   ... ...............++.++.+|+.+||+.||.+||||+|+|+||||++++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence            0  0   000 000000000111124677899999999999999999999999999999874

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=9.1e-41  Score=275.60  Aligned_cols=213  Identities=19%  Similarity=0.237  Sum_probs=168.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|+... +  +..||+|...    ........+.+|+.+++.++||||+++    ...+..+
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~  119 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKS-S--KQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY  119 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            579999999999999999999987 5  7788999722    122334457789999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||||++|++|.+++.+..  +.....+..||+.||.|||++||+||||||+|||++.++                    
T Consensus       120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~  199 (370)
T cd05596         120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR  199 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence            9999999999999986632  222333445999999999999999999999999998666                    


Q ss_pred             ----------C-------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 ----------Y-------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 ----------~-------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                .             ....+|+||+||++++|++|..||.+.+....+..+.......   .         
T Consensus       200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~---~---------  267 (370)
T cd05596         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL---T---------  267 (370)
T ss_pred             CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC---C---------
Confidence                      0             1234789999999999999999998876655554444311000   0         


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~  242 (246)
                          .+         ....+|+++.+|+++||+.+|.+  |+|++|+++||||++.
T Consensus       268 ----~~---------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         268 ----FP---------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             ----CC---------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence                00         01357899999999999999998  9999999999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2.6e-40  Score=263.79  Aligned_cols=233  Identities=33%  Similarity=0.549  Sum_probs=187.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++++.||+|++|.||+|++.. +  +..+++|...   ........+.+|+++++.++||||+++    .+.+..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKL-T--GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   77 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECC-C--CCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEE
Confidence            48999999999999999999876 5  7788888722   222234578899999999999999998    567889999


Q ss_pred             EeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |||++ ++|.+++.......+.     ....|++.||.|||++|++||||+|+||+++.++                   
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~  156 (284)
T cd07860          78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  156 (284)
T ss_pred             eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence            99998 7898888653323333     3344999999999999999999999999998765                   


Q ss_pred             ----------Ce----------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 ----------YT----------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 ----------~~----------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                .+          ...+|+||||+++++|++|+.||...++......+.+..+.+....++.....+.+..
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07860         157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP  236 (284)
T ss_pred             cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence                      01          1236799999999999999999998887777778888888887777766555554444


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .++.+.........+.++++++++|.+||..||++|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            445444445555556789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.1e-40  Score=275.01  Aligned_cols=236  Identities=21%  Similarity=0.248  Sum_probs=176.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----------c
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----------E   67 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----------~   67 (246)
                      +++|++.+.||+|+||.||+|.+.. .  +..||+|...   ........+.+|+.+++.++||||+++          .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAI-L--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECC-C--CcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence            4789999999999999999999877 5  7778899832   223334577889999999999999987          1


Q ss_pred             CCceEEEEEeccCcccHHHHHhhh-cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNF-LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------  136 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------  136 (246)
                      .....|+||||++ ++|.+.+... .......+..|++.||.|||++||+||||||+|||++.++ ..++          
T Consensus       100 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kL~DfG~a~~~~  177 (364)
T cd07875         100 EFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAG  177 (364)
T ss_pred             ccCeEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC-cEEEEeCCCccccC
Confidence            2246899999999 6787777542 2233344555999999999999999999999999998765 2233          


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc-
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF-  187 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  187 (246)
                                                  +|+||+||++++|++|+.||.+.+.......+....+.|.++.+....... 
T Consensus       178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (364)
T cd07875         178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR  257 (364)
T ss_pred             CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence                                        569999999999999999999888888888888888877665433322110 


Q ss_pred             ccccccC------------CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          188 PFIYCYE------------ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       188 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      .+....+            ..............++++++||.+||..||.+|||+.|+|+||||..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            0000000            00000011111234678999999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.7e-41  Score=274.13  Aligned_cols=238  Identities=26%  Similarity=0.357  Sum_probs=181.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----------cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----------EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~   68 (246)
                      ++|++++.||+|+||.||+|.+.. +  +..||+|....   .......+.+|+.+++.++|+||+++          ..
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTR-L--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECC-C--CCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            589999999999999999999877 5  77889997322   12234567789999999999999987          11


Q ss_pred             CceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      ....++++++++ ++|.+++...  +......++.||+.||.|||++||+||||||+||+++.++               
T Consensus        92 ~~~~~~~~~~~~-~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878          92 FNEVYLVTNLMG-ADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD  170 (343)
T ss_pred             cCcEEEEeecCC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence            245789999986 9998887642  2333344455999999999999999999999999998765               


Q ss_pred             -----------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--c
Q 036362          132 -----------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--P  188 (246)
Q Consensus       132 -----------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  188 (246)
                                 .          ....+|+||+||++++|++|..||.+.+..+....+....+.+............  .
T Consensus       171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07878         171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARK  250 (343)
T ss_pred             CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHH
Confidence                       0          1123679999999999999999999887777777777777776655433322111  1


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +....+......+.......++.+.+|+.+||..||.+|||+.|+++||||.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         251 YIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             HhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence            1112222333334445567788999999999999999999999999999998764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-40  Score=270.18  Aligned_cols=217  Identities=18%  Similarity=0.245  Sum_probs=169.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+...    .......+.+|+.++..++||||+++    ...+..+
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~   77 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKD-T--GEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLY   77 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECC-C--CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEE
Confidence            579999999999999999999987 5  77899998221    12334568889999999999999988    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---------------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---------------  135 (246)
                      +||||+++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++ ..+               
T Consensus        78 lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~kL~Dfg~a~~~~~~~~  156 (333)
T cd05600          78 LAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG-HIKLTDFGLSKGIVTYAN  156 (333)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-CEEEEeCcCCcccccccC
Confidence            9999999999999997532   222333445999999999999999999999999998766 222               


Q ss_pred             ---------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          136 ---------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       136 ---------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                           .+|+||+||++++|++|..||...+..+....+........                .+
T Consensus       157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----------------~~  220 (333)
T cd05600         157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ----------------RP  220 (333)
T ss_pred             CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc----------------CC
Confidence                                 35699999999999999999987766554444433110000                00


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...     .....+++++.+|+.+||..+|.+|||+.++++||||++++
T Consensus       221 ~~~-----~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~  264 (333)
T cd05600         221 VYD-----DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD  264 (333)
T ss_pred             CCC-----ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence            000     00035789999999999999999999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=5.7e-40  Score=261.80  Aligned_cols=233  Identities=33%  Similarity=0.510  Sum_probs=177.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|+||.||+|++.. +  +..+++|...   ........+.+|+.+++.++|+||+++    .+.+..+++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~-~--g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRE-T--HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLV   77 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECC-C--CcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEE
Confidence            58999999999999999999987 5  7778888732   223334567889999999999999998    667789999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||++ ++|.+++....    ......+..||+.||.|||++|++||||||+||+++.++                    
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  156 (284)
T cd07839          78 FEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY  156 (284)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc
Confidence            99999 68888775422    222333444999999999999999999999999998665                    


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCC-CCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPL-SEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                         .....+|+||+||++++|++|..| |.+.+....+..+.+..+.+....++.....+.+..
T Consensus       157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07839         157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP  236 (284)
T ss_pred             CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc
Confidence                               001235699999999999998777 455555667777888778777666655444433311


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .........+....+.+++++.+|+.+||..||.+|||++++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            111111122334456789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6e-42  Score=254.21  Aligned_cols=238  Identities=24%  Similarity=0.366  Sum_probs=195.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe------------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK------------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------------   66 (246)
                      +.|+-..+||+|.||.||+|+.++ +  ++.|++|+   ....++.....++|+.+|..+.|+|++.+            
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n-~--~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~   93 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKN-T--GKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN   93 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcC-c--cchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence            467888899999999999999988 5  77788877   45678889999999999999999999876            


Q ss_pred             cCCceEEEEEeccCcccHHHHHhhh----cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------
Q 036362           67 ENDKLVYQIFEYTGLLNLRKVIKNF----LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------  131 (246)
                      .++..+|+|+.+|+ .||.-++.+.    +...+...+-++++||.|+|...|+|||+||+|+|++.+|           
T Consensus        94 r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar  172 (376)
T KOG0669|consen   94 RDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLAR  172 (376)
T ss_pred             cccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence            34567999999999 9999888653    2334455555999999999999999999999999999888           


Q ss_pred             --------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          132 --------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       132 --------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                      .....+|+|+.||++++|+++.+.+.+.++..++..|..++|....+.
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev  252 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV  252 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence                                            112234599999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccccCC-CCcchhhhhCC-----CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          180 LPGVTTFFPFIYCYEE-SEPKDLAILLP-----DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      |+++...+.+.....+ -.......+..     .-++++.||++++|..||.+|++++++|+|.||..-+
T Consensus       253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence            9999988776543111 11111111111     1256899999999999999999999999999997643

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.8e-40  Score=269.43  Aligned_cols=204  Identities=17%  Similarity=0.212  Sum_probs=160.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      +.||+|+||.||+|++.. +  ++.||+|+...    .......+.+|+.+++.++||||+++    ...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   77 (323)
T cd05571           1 KLLGKGTFGKVILVREKA-T--GKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYA   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCC
Confidence            469999999999999977 5  78899997221    22334567889999999999999887    5678899999999


Q ss_pred             CcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           80 GLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        80 ~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ++++|.+++....   +.....+..||+.||+|||++||+||||||+|||++.++                         
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  157 (323)
T cd05571          78 NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence            9999999886532   223333445999999999999999999999999998766                         


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 -------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                   .....+|+||+||++++|++|..||...+.......+..  +..                       
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~--~~~-----------------------  212 (323)
T cd05571         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEI-----------------------  212 (323)
T ss_pred             CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc--CCC-----------------------
Confidence                         012235699999999999999999987655443333322  000                       


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                          ..+..+++++.+|+++||..||++||     ++.++++||||++++
T Consensus       213 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~  258 (323)
T cd05571         213 ----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN  258 (323)
T ss_pred             ----CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence                01246789999999999999999999     899999999998863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1e-40  Score=275.84  Aligned_cols=236  Identities=25%  Similarity=0.268  Sum_probs=177.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCc-----
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDK-----   70 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~-----   70 (246)
                      +|++.+.||+|+||.||++.+.. +  ++.||+|....   .......+.+|+.+++.++|+||+++    ...+     
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   77 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPR-D--GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFE   77 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECC-C--CCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccc
Confidence            58899999999999999999876 5  77899997322   12234578899999999999999987    2222     


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ..|+|+||++ ++|.+++....   ......+..||+.||.|||++|++||||||+|||++.++                
T Consensus        78 ~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~  156 (372)
T cd07853          78 EIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD  156 (372)
T ss_pred             eEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence            7899999998 78888875432   222333455999999999999999999999999998765                


Q ss_pred             ------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-
Q 036362          132 ------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-  186 (246)
Q Consensus       132 ------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  186 (246)
                                              .....+|+||+||++++|++|+.||.+.+...+...+.+..|.+....+...... 
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  236 (372)
T cd07853         157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA  236 (372)
T ss_pred             ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence                                    0112357999999999999999999998888888889988888776543221110 


Q ss_pred             cccccccCCCCc--chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          187 FPFIYCYEESEP--KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       187 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ............  ..........++++.+|+.+||..||.+|||+.|+++||||++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            000000000000  11112234568999999999999999999999999999999873

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.4e-40  Score=273.51  Aligned_cols=237  Identities=22%  Similarity=0.240  Sum_probs=174.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----------c
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----------E   67 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----------~   67 (246)
                      +++|++.+.||+|+||.||+|.+.. .  ++.+|+|....   .......+.+|+.+++.++||||+++          .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAV-L--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecC-C--CceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence            4689999999999999999999876 5  77889997322   22334577789999999999999987          1


Q ss_pred             CCceEEEEEeccCcccHHHHHhhh-cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-----------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNF-LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-----------  135 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-----------  135 (246)
                      .....+++|||++ ++|.+.+... .......+..|++.||.|||++||+||||||+|||++.++ ..+           
T Consensus        93 ~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~-~~kl~Dfg~~~~~~  170 (355)
T cd07874          93 EFQDVYLVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAG  170 (355)
T ss_pred             ccceeEEEhhhhc-ccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC-CEEEeeCcccccCC
Confidence            2246799999999 6777766542 2223334555999999999999999999999999998765 222           


Q ss_pred             ---------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-c
Q 036362          136 ---------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-F  187 (246)
Q Consensus       136 ---------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  187 (246)
                                                 .+|+||+||++++|++|+.||.+.+.......+.+.++.+.++.+...... .
T Consensus       171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (355)
T cd07874         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_pred             CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHH
Confidence                                       256999999999999999999988877777777777777765543322111 0


Q ss_pred             ccccccCC------------CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 PFIYCYEE------------SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      .+....+.            .............+.++++|+.+||..||++|||+.|+|+||||...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            00000000            00000011122356789999999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-40  Score=271.40  Aligned_cols=212  Identities=17%  Similarity=0.269  Sum_probs=166.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+...    .......+.+|+.+++.++||||+++    ..++..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~   77 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKD-T--GHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLY   77 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEE
Confidence            589999999999999999999987 5  77899998321    22334567889999999999999998    6778999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +||||+++++|.+++....   +.....++.|++.||.|||++||+||||||+|||++.++.                  
T Consensus        78 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  157 (364)
T cd05599          78 LIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT  157 (364)
T ss_pred             EEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence            9999999999999986532   2233334559999999999999999999999999976551                  


Q ss_pred             ----------------------------------------------------------eeeEEEeehhhHHHHHHhhCCC
Q 036362          133 ----------------------------------------------------------TVKIARLISVGCIFAEMVIQEP  154 (246)
Q Consensus       133 ----------------------------------------------------------~~~~~Di~slG~i~~~l~~g~~  154 (246)
                                                                                ....+|+||+||++++|++|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~  237 (364)
T cd05599         158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP  237 (364)
T ss_pred             cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence                                                                      0123789999999999999999


Q ss_pred             CCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC---HH
Q 036362          155 LSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT---VN  231 (246)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s---~~  231 (246)
                      ||...+.......+......         ..       .+.         ...+++++.+||++||. +|.+|++   +.
T Consensus       238 Pf~~~~~~~~~~~i~~~~~~---------~~-------~~~---------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~  291 (364)
T cd05599         238 PFCSDNPQETYRKIINWKET---------LQ-------FPD---------EVPLSPEAKDLIKRLCC-EAERRLGNNGVN  291 (364)
T ss_pred             CCCCCCHHHHHHHHHcCCCc---------cC-------CCC---------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence            99877655544443321000         00       000         02568999999999996 9999998   99


Q ss_pred             HHhcCCCCcCC
Q 036362          232 DALNHHYYRDV  242 (246)
Q Consensus       232 e~l~h~~~~~~  242 (246)
                      |+++||||+++
T Consensus       292 ~ll~h~~~~~~  302 (364)
T cd05599         292 EIKSHPFFKGV  302 (364)
T ss_pred             HHhcCCCcCCC
Confidence            99999999876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=4.8e-40  Score=266.28  Aligned_cols=230  Identities=26%  Similarity=0.395  Sum_probs=166.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe------cCCceEEEEEeccC
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVYQIFEYTG   80 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~lv~e~~~   80 (246)
                      .++||+|+||.||+|++.. ...++.+|+|.... ......+.+|+.+++.++||||+++      ......+++|||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~-~~~~~~~aiK~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKD-GKDDRDYALKQIEG-TGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEcc-CCCCceEEEEEECC-CCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            4689999999999999764 32367888987322 2334568899999999999999987      33567899999998


Q ss_pred             cccHHHHHhhhc------------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC----C-------------
Q 036362           81 LLNLRKVIKNFL------------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS----D-------------  131 (246)
Q Consensus        81 ~~~L~~~~~~~~------------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~----~-------------  131 (246)
                       ++|.+++....            ......++.||+.||.|||++||+||||||+|||++.+    +             
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence             78988875321            11123344599999999999999999999999999422    1             


Q ss_pred             -----------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcc---------hHHHHHHHHhhC
Q 036362          132 -----------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASE---------SRERISIFRLMG  173 (246)
Q Consensus       132 -----------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~~~~~~  173 (246)
                                                   .....+|+||+||++++|++|.+||....+         ..++..+...+|
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG  242 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence                                         012235699999999999999999975432         356677888888


Q ss_pred             CCCcCcCCCCCCcccccccc--------CCCCc-chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          174 EPSEETLPGVTTFFPFIYCY--------EESEP-KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .|....|......+......        ..... ..........+.++.+|+++||+.||.+|||++|+|+||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            88777665543332111000        00000 01111122356789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=4.9e-40  Score=267.32  Aligned_cols=234  Identities=15%  Similarity=0.164  Sum_probs=163.0

Q ss_pred             cceeeeCCc--cceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            5 RKVELIGRG--KYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         5 ~i~~~lg~G--~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +++++||+|  +|++||++..+. +  ++.||+|....   .......+.+|+.+++.++||||+++    ..++..++|
T Consensus         1 ~~~~~ig~G~~~~~~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv   77 (327)
T cd08227           1 ELLTVIGRGFEDLMTVNLARYKP-T--GEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV   77 (327)
T ss_pred             ChhhhccccccceEEEEEEeecc-c--CcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEE
Confidence            467899999  678999999987 6  88899998322   12234567789999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |||+++++|.+++.......+.     .+..|++.||.|||++||+||||||+||+++.++                   
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            9999999999999654322233     2344999999999999999999999999997543                   


Q ss_pred             -----------------C-----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCc------
Q 036362          132 -----------------Y-----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE------  177 (246)
Q Consensus       132 -----------------~-----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------  177 (246)
                                       .           ....+|+||+||++++|++|..||..............  +..+.      
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~  235 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTT  235 (327)
T ss_pred             ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccc
Confidence                             0           11346899999999999999999976544332221111  11100      


Q ss_pred             ---CcC----------CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          178 ---ETL----------PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       178 ---~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                         +..          .+.........................+++++.+|+++||+.||++|||++|+++||||+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence               000          000000000000000000111112235688999999999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-39  Score=258.66  Aligned_cols=235  Identities=31%  Similarity=0.507  Sum_probs=180.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +++|++.+.||+|++|.||+|.+.. +  ++.|++|....  .......+.+|+.+++.++|+||+++    ...+..++
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKL-T--GQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL   80 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcC-C--CcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence            5789999999999999999999876 5  77899998322  22234567789999999999999998    56789999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      ||||++ ++|.+++.....    ........|++.||.|||++|++||||||+||+++.++                   
T Consensus        81 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  159 (291)
T cd07844          81 VFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT  159 (291)
T ss_pred             EEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence            999999 699998865322    12233344999999999999999999999999998655                   


Q ss_pred             ----------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCc-chHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 ----------Y----------TVKIARLISVGCIFAEMVIQEPLSEDAS-ESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 ----------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                .          ....+|+||+|+++++|++|..||.... ..++...+.+.++.+.+..++.......+.
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK  239 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence                      0          0122479999999999999999997665 456677778888888777776655443222


Q ss_pred             cc-cCCCCcchhhhhCCCCC--hHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YC-YEESEPKDLAILLPDLE--PAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~-~~~~~~~~~~~~~~~~~--~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .. ...............++  .++.+++.+||+.||++|||+.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            11 11112222333334555  899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.4e-40  Score=273.10  Aligned_cols=212  Identities=16%  Similarity=0.173  Sum_probs=162.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++++.||+|+||.||+|++.. +  ++.||+|+...  .......+.+|+.+++.++|+||+++    ...+..++|
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  150 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRP-T--GRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL  150 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECC-C--CCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence            578899999999999999999876 5  77899998322  22234578899999999999999998    567789999


Q ss_pred             EeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      |||+++++|.+.... .+..+..+..||+.||.|||++||+||||||+|||++.++                        
T Consensus       151 ~e~~~~~~L~~~~~~-~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~  229 (353)
T PLN00034        151 LEFMDGGSLEGTHIA-DEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSV  229 (353)
T ss_pred             EecCCCCcccccccC-CHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccc
Confidence            999999998754321 1223344556999999999999999999999999998765                        


Q ss_pred             -----Ceee--------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -----YTVK--------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -----~~~~--------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                           .+++              .+|+|||||++++|++|+.||...................                 
T Consensus       230 gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------------  292 (353)
T PLN00034        230 GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ-----------------  292 (353)
T ss_pred             cCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-----------------
Confidence                 1122              4689999999999999999997433221111111110000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                              .......+++++.+|+.+||..||++|||+.|+++||||..-
T Consensus       293 --------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        293 --------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             --------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence                    001124678999999999999999999999999999999875

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.7e-39  Score=262.14  Aligned_cols=238  Identities=27%  Similarity=0.439  Sum_probs=183.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe------cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK------ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~   71 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..||+|...   ..........+|+.+++.++|+||+++      ...+.
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTT-S--GEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS   82 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECC-C--CcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence            4789999999999999999999987 5  7788999832   222234456789999999999999987      22357


Q ss_pred             EEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      .++||||++ ++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++                
T Consensus        83 ~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          83 IFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence            899999999 68888876532    222233444999999999999999999999999998765                


Q ss_pred             -----------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 -----------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 -----------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                             .....+|+||+||++++|++|.+||...+.......+....+.+....|+.....+.
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07845         162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL  241 (309)
T ss_pred             cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence                                   012235699999999999999999999888888888999888888777765443332


Q ss_pred             ccc-ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIY-CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ... .................++++.+|+.+||..||++|||+.|++.||||++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence            111 111111122223334578999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-40  Score=268.53  Aligned_cols=213  Identities=18%  Similarity=0.290  Sum_probs=167.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+..    ........+.+|+.++..++|+||+++    ...+..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKD-T--GQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLY   77 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECC-C--CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEE
Confidence            589999999999999999999987 5  7889999822    122345678889999999999999998    5678999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +||||+++++|.+++.+..   ......+..||+.||.|||++||+||||||+|||++.++.                  
T Consensus        78 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          78 LVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence            9999999999999987642   2222334449999999999999999999999999986650                  


Q ss_pred             -------------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchH
Q 036362          133 -------------------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESR  163 (246)
Q Consensus       133 -------------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~  163 (246)
                                                                       ....+|+|||||++++|++|+.||.......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~  237 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE  237 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence                                                             0124789999999999999999998776554


Q ss_pred             HHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-HHHHhcCCCCcCC
Q 036362          164 ERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-VNDALNHHYYRDV  242 (246)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-~~e~l~h~~~~~~  242 (246)
                      ....+.......         .       .+.         ...+++++.+|+.+||. ||.+||+ ++++++||||+++
T Consensus       238 ~~~~i~~~~~~~---------~-------~p~---------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         238 TYNKIINWKESL---------R-------FPP---------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             HHHHHhccCCcc---------c-------CCC---------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            444433310000         0       000         12368999999999997 9999999 9999999999986


Q ss_pred             C
Q 036362          243 V  243 (246)
Q Consensus       243 ~  243 (246)
                      .
T Consensus       292 ~  292 (350)
T cd05573         292 D  292 (350)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-40  Score=274.62  Aligned_cols=210  Identities=20%  Similarity=0.324  Sum_probs=178.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~   71 (246)
                      +++|+++++||+|.||+|+++..+. +  ++.+|||+    ........+....|-+|+...+ ||+++.+    ...++
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~-~--~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKG-T--NEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcC-C--CcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            5789999999999999999999998 5  67888888    3344455677888988888885 9999998    67889


Q ss_pred             EEEEEeccCcccHHHHHh--hhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           72 VYQIFEYTGLLNLRKVIK--NFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      +|.||||+.|||+..+..  .+++.....+.+.++.||.|||++||||||||.+|||+|.+| ..+++|           
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG-h~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG-HVKIADFGLCKEGMGQG  522 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC-cEEecccccccccCCCC
Confidence            999999999999655543  355667777888999999999999999999999999999988 445555           


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  .|||||++|||+.|..||.+.++.+.+..|...  .+               
T Consensus       523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--~~---------------  585 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--EV---------------  585 (694)
T ss_pred             CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CC---------------
Confidence                                        899999999999999999999999888877662  10               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                  .++..+|.++.++++++|+.||++|+.     +.++..||||.+++
T Consensus       586 ------------~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  586 ------------RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             ------------CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence                        012568999999999999999999996     58899999999874

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-40  Score=271.21  Aligned_cols=212  Identities=17%  Similarity=0.253  Sum_probs=164.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||.||+|.+.. +  ++.||+|...    ........+.+|+.+++.++||||+++    .+....|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~   77 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKD-T--GKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLY   77 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECC-C--CCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeE
Confidence            589999999999999999999987 5  7789999722    122234567889999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +||||++|++|.+++....   +.....++.|++.||.|||++||+||||||+|||++.++.                  
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          78 LIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            9999999999999986532   2223334559999999999999999999999999965440                  


Q ss_pred             -------------------------------------------------------------------eeeEEEeehhhHH
Q 036362          133 -------------------------------------------------------------------TVKIARLISVGCI  145 (246)
Q Consensus       133 -------------------------------------------------------------------~~~~~Di~slG~i  145 (246)
                                                                                         ....+|+||+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  237 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI  237 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence                                                                               0123789999999


Q ss_pred             HHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCC
Q 036362          146 FAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPK  225 (246)
Q Consensus       146 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~  225 (246)
                      +++|++|..||........+..+.......         .       .+.         ...++.++.+|+.+||. +|.
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------~-------~p~---------~~~~s~~~~dli~~lL~-~~~  291 (377)
T cd05629         238 MFECLIGWPPFCSENSHETYRKIINWRETL---------Y-------FPD---------DIHLSVEAEDLIRRLIT-NAE  291 (377)
T ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHccCCcc---------C-------CCC---------CCCCCHHHHHHHHHHhc-CHh
Confidence            999999999998766555444443310000         0       000         12468899999999997 666


Q ss_pred             CC---CCHHHHhcCCCCcCC
Q 036362          226 ER---ITVNDALNHHYYRDV  242 (246)
Q Consensus       226 ~R---~s~~e~l~h~~~~~~  242 (246)
                      .|   +|+.|+++||||+++
T Consensus       292 ~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         292 NRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             hcCCCCCHHHHhcCCCcCCC
Confidence            65   599999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.4e-39  Score=269.77  Aligned_cols=214  Identities=16%  Similarity=0.241  Sum_probs=163.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ..|++++.||+|+||+||+|++.. +  ++.||+|+...    .......+.+|+.+++.++|+||+++    .+.+..+
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~-~--~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~   77 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVD-T--HALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY   77 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEE
Confidence            368999999999999999999987 6  78899998321    22334568899999999999999998    6678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------C----------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------Y----------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------~----------  132 (246)
                      +||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++        .          
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~  157 (381)
T cd05626          78 FVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS  157 (381)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence            9999999999999986532   222333445999999999999999999999999997544        0          


Q ss_pred             -------------------------------------------------------------------eeeEEEeehhhHH
Q 036362          133 -------------------------------------------------------------------TVKIARLISVGCI  145 (246)
Q Consensus       133 -------------------------------------------------------------------~~~~~Di~slG~i  145 (246)
                                                                                         ....+|+||+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i  237 (381)
T cd05626         158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI  237 (381)
T ss_pred             ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence                                                                               0113689999999


Q ss_pred             HHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhh--cC
Q 036362          146 FAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLR--VN  223 (246)
Q Consensus       146 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~--~d  223 (246)
                      +++|++|..||...+.......+.......         .       .+         ....+++++.+|+.+|+.  .+
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------~-------~~---------~~~~~s~~~~dli~~ll~~~~~  292 (381)
T cd05626         238 LFEMLVGQPPFLAPTPTETQLKVINWENTL---------H-------IP---------PQVKLSPEAVDLITKLCCSAEE  292 (381)
T ss_pred             HHHHHhCCCCCcCCCHHHHHHHHHcccccc---------C-------CC---------CCCCCCHHHHHHHHHHccCccc
Confidence            999999999998766544333332210000         0       00         013578999999999654  45


Q ss_pred             CCCCCCHHHHhcCCCCcCCC
Q 036362          224 PKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       224 p~~R~s~~e~l~h~~~~~~~  243 (246)
                      |..|+|+.|+++||||+++.
T Consensus       293 ~~~R~~~~~~l~hp~f~~~~  312 (381)
T cd05626         293 RLGRNGADDIKAHPFFSEVD  312 (381)
T ss_pred             ccCCCCHHHHhcCcccCCCC
Confidence            55599999999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=5.1e-40  Score=272.05  Aligned_cols=213  Identities=14%  Similarity=0.222  Sum_probs=165.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||.||+|++.. +  ++.||+|....    .......+.+|+.+++.++|+||+++    ...+..+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~   77 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVD-T--NALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLY   77 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC-C--CCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEE
Confidence            479999999999999999999987 6  78899997221    22345668899999999999999998    5678999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +||||+++++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++.                  
T Consensus        78 lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          78 FVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence            9999999999999987642   2222334459999999999999999999999999975440                  


Q ss_pred             ---------------------------------------------------------------eeeEEEeehhhHHHHHH
Q 036362          133 ---------------------------------------------------------------TVKIARLISVGCIFAEM  149 (246)
Q Consensus       133 ---------------------------------------------------------------~~~~~Di~slG~i~~~l  149 (246)
                                                                                     ....+|+||+||++++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  237 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  237 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence                                                                           01136899999999999


Q ss_pred             hhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-
Q 036362          150 VIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-  228 (246)
Q Consensus       150 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-  228 (246)
                      ++|..||.+.........+.......         .       .         .....+++++.+|+.+|+ .+|.+|+ 
T Consensus       238 l~G~~Pf~~~~~~~~~~~i~~~~~~~---------~-------~---------~~~~~~s~~~~~li~~l~-~~p~~R~~  291 (376)
T cd05598         238 LVGQPPFLADTPAETQLKVINWETTL---------H-------I---------PSQAKLSREASDLILRLC-CGAEDRLG  291 (376)
T ss_pred             hhCCCCCCCCCHHHHHHHHhccCccc---------c-------C---------CCCCCCCHHHHHHHHHHh-cCHhhcCC
Confidence            99999998776544333322210000         0       0         001357899999999987 5999999 


Q ss_pred             --CHHHHhcCCCCcCCC
Q 036362          229 --TVNDALNHHYYRDVV  243 (246)
Q Consensus       229 --s~~e~l~h~~~~~~~  243 (246)
                        |+.++++||||+++.
T Consensus       292 ~~t~~ell~h~~~~~~~  308 (376)
T cd05598         292 KNGADEIKAHPFFKGID  308 (376)
T ss_pred             CCCHHHHhCCCCcCCCC
Confidence              999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=6.1e-40  Score=267.10  Aligned_cols=212  Identities=17%  Similarity=0.233  Sum_probs=167.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|....    .......+.+|+.+++.++|+||+++    ...+..+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~   77 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKA-T--GDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLY   77 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEE
Confidence            579999999999999999999987 5  77889998221    22345567889999999999999988    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +||||+++++|.+++.+..    +.....+..|++.||.|||++||+||||||+|||++.++                  
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          78 LVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             EEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence            9999999999999997642    222333445999999999999999999999999998766                  


Q ss_pred             ------------Ce---------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ------------YT---------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ------------~~---------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                  .+               ...+|+||+||++++|++|..||........+..+.......         
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~---------  228 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL---------  228 (330)
T ss_pred             eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc---------
Confidence                        00               134699999999999999999998766555444443310000         


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      .       ++         ....+++++.+|+++||. ||.+|||+.++++||||+++
T Consensus       229 ~-------~~---------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         229 K-------FP---------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             C-------CC---------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            0       00         013578999999999997 99999999999999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.5e-39  Score=264.78  Aligned_cols=233  Identities=18%  Similarity=0.232  Sum_probs=165.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||++++.. +  +..+|+|....  .......+.+|+++++.++||||+++    ...+..++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKP-S--GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECC-C--CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            689999999999999999999987 5  77888887322  12234578899999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCCCeee----------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      |||+++++|.+++....   +.....+..|++.||.|||++ +|+||||||+|||++.++ ..+                
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~  160 (331)
T cd06649          82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN  160 (331)
T ss_pred             eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC-cEEEccCcccccccccccc
Confidence            99999999999997632   222233444999999999986 699999999999998766 122                


Q ss_pred             ---------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc----CCCCCCcc---
Q 036362          136 ---------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET----LPGVTTFF---  187 (246)
Q Consensus       136 ---------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---  187 (246)
                                           .+|+||+||++++|++|+.||...+..+...    .++.+....    ........   
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  236 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEA----IFGRPVVDGEEGEPHSISPRPRPP  236 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HhcccccccccCCccccCcccccc
Confidence                                 2569999999999999999997655433222    122211100    00000000   


Q ss_pred             --cccc-ccCCCCcch-------------hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 --PFIY-CYEESEPKD-------------LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 --~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                        .... .........             ........++++++|+.+||..||++|||+.|+++||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence              0000 000000000             000012468899999999999999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.4e-39  Score=268.46  Aligned_cols=213  Identities=18%  Similarity=0.244  Sum_probs=166.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||++++.. +  ++.+|+|...    ........+.+|+.+++.++||||+++    ......+
T Consensus        43 ~~y~~~~~lG~G~fg~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          43 EDYDVVKVIGRGAFGEVQLVRHKS-S--QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             HHCeEEEEEEecCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            579999999999999999999987 5  7788888721    222334567889999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||||+++++|.+++....  +.....+..||+.||.|||++||+||||||+|||++.++                    
T Consensus       120 lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~  199 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR  199 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence            9999999999999987532  222333445999999999999999999999999998665                    


Q ss_pred             ----------C-------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 ----------Y-------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 ----------~-------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                .             ....+|+||+||++++|++|..||...+.......+........            
T Consensus       200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~------------  267 (370)
T cd05621         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN------------  267 (370)
T ss_pred             cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC------------
Confidence                      0             12357899999999999999999987766555554443211100            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~  242 (246)
                          .+.         ...+++.+++++.+||+.++.+  |+|+.|+++||||++.
T Consensus       268 ----~p~---------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         268 ----FPE---------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             ----CCC---------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence                000         0246899999999999866654  8999999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=7.6e-40  Score=277.85  Aligned_cols=238  Identities=16%  Similarity=0.178  Sum_probs=168.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC------CceEEe-----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY------PLIFRK-----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~-----~~~~   70 (246)
                      ++|++.++||+|+||+||+|.+.. +  ++.||+|+.............|+.+++.++|      .+++++     ....
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~-~--~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRK-R--KEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcC-C--CeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            579999999999999999999877 5  7789999843222333455667776666654      446665     3456


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCC--------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDY--------------  132 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~--------------  132 (246)
                      +.++||++++ ++|.+++.+..   ...+..+..||+.||.|||+ .||+||||||+|||++.++.              
T Consensus       206 ~~~iv~~~~g-~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        206 HMCIVMPKYG-PCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             eEEEEEeccC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            8999999986 88888886532   23334455599999999998 59999999999999975431              


Q ss_pred             -eeeE------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCC
Q 036362          133 -TVKI------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       133 -~~~~------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                       ..++                                    +|+|||||+++||++|+.||.+.+..+....+...+|.+
T Consensus       285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~  364 (467)
T PTZ00284        285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL  364 (467)
T ss_pred             ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence             1222                                    359999999999999999999888888888888888876


Q ss_pred             CcCcCCCCCCcc--ccc---cc-cCCCCcchhhhhC-------CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          176 SEETLPGVTTFF--PFI---YC-YEESEPKDLAILL-------PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       176 ~~~~~~~~~~~~--~~~---~~-~~~~~~~~~~~~~-------~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      +..+........  .+.   .. .+...........       ...++.+.|||.+||.+||.+|||++|+|+||||.+.
T Consensus       365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence            554432111000  000   00 0000000000000       0125678899999999999999999999999999985


Q ss_pred             C
Q 036362          243 V  243 (246)
Q Consensus       243 ~  243 (246)
                      .
T Consensus       445 ~  445 (467)
T PTZ00284        445 Y  445 (467)
T ss_pred             C
Confidence            3

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.2e-39  Score=270.37  Aligned_cols=213  Identities=15%  Similarity=0.243  Sum_probs=164.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      .+|+++++||+|+||.||+|++.. +  ++.||+|....    .......+.+|+.+++.++|+||+++    .+.+..+
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~-~--~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~   77 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVD-T--KALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY   77 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECC-C--CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEE
Confidence            469999999999999999999987 5  77889998321    12334578889999999999999998    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------C----------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------Y----------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------~----------  132 (246)
                      +||||+++++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++        .          
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~  157 (382)
T cd05625          78 FVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (382)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence            9999999999999986532   223333445999999999999999999999999997543        0          


Q ss_pred             -------------------------------------------------------------------eeeEEEeehhhHH
Q 036362          133 -------------------------------------------------------------------TVKIARLISVGCI  145 (246)
Q Consensus       133 -------------------------------------------------------------------~~~~~Di~slG~i  145 (246)
                                                                                         ....+|+||+||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  237 (382)
T cd05625         158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  237 (382)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence                                                                               0113689999999


Q ss_pred             HHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCC
Q 036362          146 FAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPK  225 (246)
Q Consensus       146 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~  225 (246)
                      +++|++|..||...+.......+........                .+         ....+++++.+++.+|+ .||.
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------~p---------~~~~~s~~~~~li~~l~-~~p~  291 (382)
T cd05625         238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLH----------------IP---------PQAKLSPEASDLIIKLC-RGPE  291 (382)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHccCCCcC----------------CC---------CcccCCHHHHHHHHHHc-cCHh
Confidence            9999999999987665443333332100000                00         01357899999999987 5999


Q ss_pred             CCCC---HHHHhcCCCCcCCC
Q 036362          226 ERIT---VNDALNHHYYRDVV  243 (246)
Q Consensus       226 ~R~s---~~e~l~h~~~~~~~  243 (246)
                      +|++   ++++++||||++++
T Consensus       292 ~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         292 DRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             HcCCCCCHHHHhcCCCcCCcC
Confidence            9997   99999999998863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-39  Score=262.31  Aligned_cols=201  Identities=18%  Similarity=0.254  Sum_probs=159.0

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||+|+||.||+|++.. +  ++.||+|...    ........+.+|+.+++.++||||+++    ...+..++||||+++
T Consensus         1 lg~G~~g~Vy~~~~~~-~--~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   77 (312)
T cd05585           1 IGKGSFGKVMQVRKRD-T--QRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFING   77 (312)
T ss_pred             CCcCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCC
Confidence            6999999999999987 5  7788999722    223345577889999999999999987    567889999999999


Q ss_pred             ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------------
Q 036362           82 LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------------  131 (246)
                      ++|.+++....   ......+..|++.||.|||++||+||||||+|||++.++                           
T Consensus        78 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          78 GELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence            99999986532   222233444999999999999999999999999998665                           


Q ss_pred             -----------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          132 -----------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       132 -----------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                                 .....+|+||+||++++|++|..||.+.........+...   +                         
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~---~-------------------------  209 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE---P-------------------------  209 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC---C-------------------------
Confidence                       0112357999999999999999999876654444333220   0                         


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCC---CHHHHhcCCCCcCC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERI---TVNDALNHHYYRDV  242 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~---s~~e~l~h~~~~~~  242 (246)
                       ...+..+++++.+|+.+||..||.+||   ++.|+++||||++.
T Consensus       210 -~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         210 -LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             -CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence             001246789999999999999999997   58999999999985

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.9e-39  Score=267.32  Aligned_cols=213  Identities=15%  Similarity=0.159  Sum_probs=164.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||+||+|.+.. +  ++.||+|+...    .......+.+|+.++..++|++|+++    .+....|
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~   77 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKD-T--GHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLY   77 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECC-C--CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEE
Confidence            589999999999999999999887 5  77899998321    22234567889999999999999987    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +||||++|++|.+++.+..   +.....+..|++.||.|||++||+||||||+|||++.++.                  
T Consensus        78 lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~  157 (363)
T cd05628          78 LIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT  157 (363)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence            9999999999999987532   2233334459999999999999999999999999976550                  


Q ss_pred             -------------------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCC
Q 036362          133 -------------------------------------------------------TVKIARLISVGCIFAEMVIQEPLSE  157 (246)
Q Consensus       133 -------------------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~  157 (246)
                                                                             ....+|+||+||++++|++|..||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence                                                                   0112579999999999999999998


Q ss_pred             CCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCC---CCCCHHHHh
Q 036362          158 DASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPK---ERITVNDAL  234 (246)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~---~R~s~~e~l  234 (246)
                      +.+.......+........                ++.         ...+++++++|+.+|+. +|.   .||+++|++
T Consensus       238 ~~~~~~~~~~i~~~~~~~~----------------~p~---------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~  291 (363)
T cd05628         238 SETPQETYKKVMNWKETLI----------------FPP---------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK  291 (363)
T ss_pred             CCCHHHHHHHHHcCcCccc----------------CCC---------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence            7766555554443111000                000         02468899999999775 444   468999999


Q ss_pred             cCCCCcCCC
Q 036362          235 NHHYYRDVV  243 (246)
Q Consensus       235 ~h~~~~~~~  243 (246)
                      +||||++++
T Consensus       292 ~hp~f~~~~  300 (363)
T cd05628         292 TNPFFEGVD  300 (363)
T ss_pred             CCCCCCCCC
Confidence            999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=7.6e-39  Score=255.46  Aligned_cols=234  Identities=28%  Similarity=0.501  Sum_probs=185.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|++|.||+|.+.. +  +..+++|....   .......+.+|+.+++.++|+||+++    ......++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v   77 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRE-T--GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLV   77 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECC-C--CceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEE
Confidence            68999999999999999999876 5  77888888222   13345678999999999999999988    567889999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||+ +++|.+++....    ......+..|++.||.|||++|++|+||||+||+++.++                    
T Consensus        78 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  156 (286)
T cd07832          78 MEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL  156 (286)
T ss_pred             eccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc
Confidence            9999 799999986532    222233444999999999999999999999999998654                    


Q ss_pred             ----------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 ----------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 ----------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                .          ....+|+||+||++++|++|.++|.+.........+....+.+....++.......+..
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd07832         157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK  236 (286)
T ss_pred             cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhc
Confidence                      0          12236799999999999999989988888888888888888887776666555443322


Q ss_pred             -ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          192 -CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       192 -~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                       .........+....++.++.+.+|+++||..||.+|||++++++||||.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             ccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence             1222222233444567789999999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=9.2e-39  Score=256.59  Aligned_cols=237  Identities=31%  Similarity=0.491  Sum_probs=184.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC------CCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP------DGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +|++.+.||+|++|.||+|.+.. +  ++.|++|.....      ......+..|+.+++.++|+||+++    ...+..
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   77 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKE-T--GRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNI   77 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECC-C--CcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEE
Confidence            58999999999999999999876 5  778899883222      2234456789999999999999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY----------------  132 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~----------------  132 (246)
                      ++||||+ +++|.+++....    ......+..||++||.|||++|++||||||+||+++.++.                
T Consensus        78 ~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  156 (298)
T cd07841          78 NLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN  156 (298)
T ss_pred             EEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence            9999999 699999997543    1122233449999999999999999999999999987660                


Q ss_pred             -----------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          133 -----------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       133 -----------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                             ....+|+||+||++++|++|.++|.+.........+....+.+...+++.......+
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (298)
T cd07841         157 RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY  236 (298)
T ss_pred             ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccc
Confidence                                   012266999999999999998889888877777788887788777776654444333


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ... ...............+.++.+|+.+||..||+.|||+.|+++||||++.+.
T Consensus       237 ~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         237 VEF-KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             ccc-cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence            211 111222233344567899999999999999999999999999999999654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-39  Score=255.06  Aligned_cols=232  Identities=36%  Similarity=0.618  Sum_probs=187.3

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      |++.+.||.|++|.||+|.+.. +  +..|++|....   .......+.+|+.+++.++|+|++++    ......++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~   77 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKL-T--GEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVF   77 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcC-C--CCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEE
Confidence            7889999999999999999876 5  77889997322   22334568889999999999999988    5668999999


Q ss_pred             eccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ||++ ++|.+++.......+..     +..|++.||.|||+++++||||+|+||+++.++                    
T Consensus        78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~  156 (283)
T cd07835          78 EFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY  156 (283)
T ss_pred             eccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc
Confidence            9997 79999987644222222     334999999999999999999999999998655                    


Q ss_pred             ---------Ceee----------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ---------YTVK----------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ---------~~~~----------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                               .+|+          .+|+||+|+++++|++|.+||...+.......+.+..+.|..+.|......+.+...
T Consensus       157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07835         157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT  236 (283)
T ss_pred             CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence                     0111          256999999999999999999988877777778888888887777766666655555


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      +............+..++++.+++.+||+.||++|||++|+++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            55554445555567889999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=5.5e-39  Score=256.08  Aligned_cols=233  Identities=31%  Similarity=0.570  Sum_probs=184.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +|++.++||.|++|.||+|++.. +  +..|++|...  ........+.+|+.+++.++|+||+++    ...+..++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   77 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRT-T--GEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVF   77 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECC-C--CeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEE
Confidence            58999999999999999999977 5  7788999732  223345677889999999999999998    5567899999


Q ss_pred             eccCcccHHHHHhhhc-cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           77 EYTGLLNLRKVIKNFL-DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~-~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      ||++ ++|.+++.... ...+     .....|++.||.|||++|++||||||+||+++.++                   
T Consensus        78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~  156 (284)
T cd07836          78 EYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT  156 (284)
T ss_pred             ecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence            9999 68988876532 1122     23344999999999999999999999999998654                   


Q ss_pred             ----------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 ----------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 ----------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                .          ....+|+||+||++++|++|..||.+.+.......+.+..+.|....+......+.+..
T Consensus       157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07836         157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP  236 (284)
T ss_pred             cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence                      0          01235699999999999999999998888788888888888887776665555444443


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ..+...........+..++.+.+++.+||+.||.+|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            333333334444455678999999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-39  Score=255.89  Aligned_cols=212  Identities=16%  Similarity=0.198  Sum_probs=163.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|++.++||+|+||.||++.+.. +  +..||+|....    .......+.+|+.+++.++|+||+++    ..++..++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRA-T--GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcC-C--CceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEE
Confidence            48999999999999999999876 5  77899987321    11223456789999999999999988    55678999


Q ss_pred             EEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ||||+++++|.+++.......+     ..+..|++.||.|||++|++||||||+||+++.++                  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05605          78 VLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET  157 (285)
T ss_pred             EEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence            9999999999988754322222     23344999999999999999999999999998655                  


Q ss_pred             ----------Ce---------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ----------YT---------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ----------~~---------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                .+         ...+|+||+||++++|++|..||.+.........+........                
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------  221 (285)
T cd05605         158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ----------------  221 (285)
T ss_pred             cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc----------------
Confidence                      00         1236799999999999999999987554333222222111000                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                               ...++.+++.+.+|+.+||..||.+||     +++++++||||.+.
T Consensus       222 ---------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         222 ---------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             ---------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence                     001245789999999999999999999     99999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.6e-39  Score=262.79  Aligned_cols=215  Identities=14%  Similarity=0.193  Sum_probs=161.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc-----CCCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      +|++++.||+|+||.||+++.......+..||+|+..     ........+.+|+.+++.+ +|++|+++    ...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999875322237788999721     1223345678899999999 58999987    567789


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++||||+++++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++                  
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            99999999999999986532   223333444999999999999999999999999998765                  


Q ss_pred             ----------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          132 ----------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       132 ----------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                            .....+|+|||||++++|++|..||...........+........             
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------------  227 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD-------------  227 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC-------------
Confidence                                  012246799999999999999999975332211111111100000             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                                  ...+..+++.+.+|+.+||..||++||     +++++++||||++.
T Consensus       228 ------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         228 ------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             ------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence                        001245789999999999999999999     88999999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4.8e-39  Score=261.18  Aligned_cols=209  Identities=17%  Similarity=0.205  Sum_probs=164.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCC-ceEEe----cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYP-LIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~-~i~~~----~~~~~~~   73 (246)
                      +|++++.||+|+||.||+|.+.. +  ++.||+|+..    ........+..|..++..++|+ +|+.+    ...+..|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~   77 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKG-T--DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   77 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEE
Confidence            58999999999999999999887 5  7789999722    1233455678899999999765 56665    5667899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +||||+++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++                   
T Consensus        78 lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          78 FVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT  157 (324)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence            9999999999999986542   222233444999999999999999999999999998765                   


Q ss_pred             ----------C---------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ----------Y---------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ----------~---------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                .         ....+|+||+||++++|++|+.||.+.+.......+....  +                 
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~-----------------  218 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--V-----------------  218 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--C-----------------
Confidence                      0         1123579999999999999999998776655554443310  0                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-----HHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-----NDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-----~e~l~h~~~~~~~  243 (246)
                                ..+..+++++.+++.+||..||.+|+++     +++++||||+.++
T Consensus       219 ----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~  264 (324)
T cd05587         219 ----------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRID  264 (324)
T ss_pred             ----------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence                      0124578999999999999999999986     8999999998753

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.2e-39  Score=262.56  Aligned_cols=203  Identities=16%  Similarity=0.203  Sum_probs=159.4

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      +.||+|+||.||++.+.. +  +..||+|+...    .......+.+|+.+++.++||||+++    ...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~   77 (328)
T cd05593           1 KLLGKGTFGKVILVREKA-S--GKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYV   77 (328)
T ss_pred             CeeeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCC
Confidence            468999999999999977 5  78899998221    22334577889999999999999987    6678899999999


Q ss_pred             CcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           80 GLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        80 ~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++                         
T Consensus        78 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  157 (328)
T cd05593          78 NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG  157 (328)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence            9999998886532   223333445999999999999999999999999998665                         


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 -------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                   .....+|+||+||++++|++|..||...+.......+..  +.                        
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--~~------------------------  211 (328)
T cd05593         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--ED------------------------  211 (328)
T ss_pred             CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--CC------------------------
Confidence                         011235699999999999999999987654433332211  00                        


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                         ...+..+++++.+|+++||..||.+|+     ++.++++||||.++
T Consensus       212 ---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         212 ---IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             ---ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence               001246789999999999999999997     89999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.1e-39  Score=262.26  Aligned_cols=207  Identities=19%  Similarity=0.258  Sum_probs=162.3

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhccc---ccCCCCceEEe----cCCceE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPL---KEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l---~~l~~~~i~~~----~~~~~~   72 (246)
                      |++++.||+|+||.||+|.+.. +  ++.||+|...    ........+.+|++++   +.++||||+++    ...+..
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~   77 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKK-T--GELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHV   77 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEE
Confidence            7899999999999999999877 5  7789999822    1222345666676554   56789999988    567899


Q ss_pred             EEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |+||||+++++|..++...  +......+..||+.||.|||++||+||||||+||+++.++                   
T Consensus        78 ~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05589          78 CFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR  157 (324)
T ss_pred             EEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc
Confidence            9999999999999887642  2223333455999999999999999999999999998766                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||+||++++|++|..||.+.+.......+...  .+                 
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~-----------------  218 (324)
T cd05589         158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND--EV-----------------  218 (324)
T ss_pred             ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC-----------------
Confidence                               0112367999999999999999999877665544443331  00                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                                ..+..+++++.+|+.+||..||.+||     ++.++++||||+++
T Consensus       219 ----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         219 ----------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             ----------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence                      01245789999999999999999999     79999999999885

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2e-38  Score=254.25  Aligned_cols=234  Identities=33%  Similarity=0.567  Sum_probs=178.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCC-CCceEEe----cCC----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMD-YPLIFRK----END----   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~----   69 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|...   ........+.+|+.+++.+. |+||+++    ...    
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~-~--~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~   77 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKN-T--GKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG   77 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECC-C--CcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC
Confidence            579999999999999999999977 5  7788999722   22234467888999999995 6999987    112    


Q ss_pred             -ceEEEEEeccCcccHHHHHhhhcc--------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe-------
Q 036362           70 -KLVYQIFEYTGLLNLRKVIKNFLD--------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT-------  133 (246)
Q Consensus        70 -~~~~lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~-------  133 (246)
                       ...+++|||++ ++|.+++.....        .....+..||+.||.|||++|++||||||+||+++.++..       
T Consensus        78 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          78 KPSLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             CceEEEEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecc
Confidence             23799999999 589888754321        1222233499999999999999999999999999972311       


Q ss_pred             ---------------------------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          134 ---------------------------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       134 ---------------------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                       ...+|+||+|+++++|++|..||.+.+.......+....+.|....+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T cd07837         157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW  236 (295)
T ss_pred             cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence                                             12356999999999999999999988888888888887777777666


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                      +.......+.. .+...........+.+++++.+||.+||..||.+|||+.|++.||||+
T Consensus       237 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         237 PGVSKLRDWHE-FPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             cchhhccchhh-cCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            65444332211 222222233334457899999999999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-39  Score=263.58  Aligned_cols=210  Identities=20%  Similarity=0.252  Sum_probs=178.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      -|.+.+.||+|-|++|.+|++.. +  ++.||+|+   .........++.+|++.|+.++|||||++    .....+|+|
T Consensus        19 LYDLekTlG~GHFAVVKLArHVF-T--GekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi   95 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVF-T--GEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI   95 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhc-c--cceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence            48889999999999999999999 7  99999999   23334445689999999999999999998    567899999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      +|.-++|+|.+||-++.    +.....+++||+.|+.|+|...+||||+||+||++...-.-.|+               
T Consensus        96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen   96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh
Confidence            99999999999996643    44455667799999999999999999999999998755423333               


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              .||||||+|+|.++.|++||...++.+.+..|.++--.                  
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt------------------  237 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT------------------  237 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc------------------
Confidence                                    45999999999999999999998888877777774111                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                 .+..++.+++|||..||..||.+|-|.++|.+|+|++.+..
T Consensus       238 -----------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  238 -----------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             -----------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence                       12468999999999999999999999999999999998754

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=4.2e-39  Score=261.36  Aligned_cols=203  Identities=16%  Similarity=0.225  Sum_probs=160.2

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      +.||+|+||.||++++.. +  +..||+|....    .......+.+|+.+++.++||||+++    ...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~   77 (323)
T cd05595           1 KLLGKGTFGKVILVREKA-T--GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA   77 (323)
T ss_pred             CeeeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCC
Confidence            468999999999999877 5  78899998221    22334567789999999999999987    5667899999999


Q ss_pred             CcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           80 GLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        80 ~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ++++|..++....   +.....+..||+.||.|||++||+||||||+|||++.++                         
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  157 (323)
T cd05595          78 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence            9999998886532   223333445999999999999999999999999998765                         


Q ss_pred             ----Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 ----YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 ----~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                          .+|         ..+|+||+||++++|++|..||...+.......+...  ..                       
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~-----------------------  212 (323)
T cd05595         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EI-----------------------  212 (323)
T ss_pred             CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CC-----------------------
Confidence                111         2357999999999999999999876654443333220  00                       


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                          ..+..+++++.+|+.+||..||.+|+     ++.++++||||.++
T Consensus       213 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         213 ----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             ----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence                01246789999999999999999998     99999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.3e-39  Score=256.34  Aligned_cols=204  Identities=24%  Similarity=0.322  Sum_probs=172.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +|++.+.||+|.||+|.+|.... .  +..||||.    ....+...-++.+||+||+.|+||||+.+    ++.+...+
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~-s--gR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHK-S--GREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhcc-C--CcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence            69999999999999999998865 5  88999988    34455566789999999999999999998    77889999


Q ss_pred             EEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           75 IFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ||||..+|.|.+|+.+.   ++.....+++||++|+.|||+++++|||+|.+|||+|.++ ..+++|             
T Consensus       131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~-NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN-NIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC-CeeeeccchhhhhccccHH
Confidence            99999999999999763   3555566677999999999999999999999999999665 445555             


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                .||||+++|.++.|..||.+.+-......|.+.. ..                 
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga-Yr-----------------  271 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA-YR-----------------  271 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc-cc-----------------
Confidence                                      8999999999999999999987766655555410 00                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                  .+..+..+.-||++||-.||++|-|+.++-+|=|.+
T Consensus       272 ------------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  272 ------------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             ------------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence                        134567888999999999999999999999998864

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.4e-38  Score=257.72  Aligned_cols=229  Identities=26%  Similarity=0.402  Sum_probs=164.7

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe------cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~lv~e~~~~   81 (246)
                      .+||+|+||.||+|+... ...+..||+|... .......+.+|+.+++.++||||+++      ......++++||++ 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~-~~~~~~~a~k~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKD-GKDEKEYALKQIE-GTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-   83 (317)
T ss_pred             eEeccCCCeeEEEEEecC-CCccceEEEEEec-CCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence            589999999999999765 3236788888732 22334568899999999999999987      34568899999999 


Q ss_pred             ccHHHHHhhhc-------ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---Ce-------------
Q 036362           82 LNLRKVIKNFL-------DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---YT-------------  133 (246)
Q Consensus        82 ~~L~~~~~~~~-------~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---~~-------------  133 (246)
                      ++|.+++....       ...++     .+..||+.||.|||++||+||||||+|||+..++   ..             
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07867          84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence            78888875321       11122     3344999999999999999999999999993221   01             


Q ss_pred             ------------------------------eeEEEeehhhHHHHHHhhCCCCCCCCcc---------hHHHHHHHHhhCC
Q 036362          134 ------------------------------VKIARLISVGCIFAEMVIQEPLSEDASE---------SRERISIFRLMGE  174 (246)
Q Consensus       134 ------------------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~  174 (246)
                                                    ...+|+||+||++++|++|.+||....+         ..+...+...+|.
T Consensus       164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (317)
T cd07867         164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGF  243 (317)
T ss_pred             CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCC
Confidence                                          1224699999999999999999975432         3456677888888


Q ss_pred             CCcCcCCCCCCcccccccc-----CCCCcchh----hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          175 PSEETLPGVTTFFPFIYCY-----EESEPKDL----AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      +....|......+.+....     ........    .......+..+.+|+.+||+.||.+|||+.|+|+||||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         244 PADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            8777666544332221100     00000111    11112356789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.2e-38  Score=255.40  Aligned_cols=235  Identities=28%  Similarity=0.475  Sum_probs=179.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCC--ce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----END--KL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~--~~   71 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..+++|...   ........+.+|+.+++.++||||+++    ...  ..
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   80 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKK-T--GEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDK   80 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECC-C--CcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCc
Confidence            3679999999999999999999976 5  6778888722   222333456789999999999999987    233  79


Q ss_pred             EEEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      .++++||++ ++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                
T Consensus        81 ~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843          81 IYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             EEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            999999999 699988865322    22233444999999999999999999999999998765                


Q ss_pred             -------------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 -------------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 -------------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                   .          ....+|+||+|+++++|++|.+||...........+....+.|.+..|+.....+.
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (293)
T cd07843         160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG  239 (293)
T ss_pred             ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence                         0          12236799999999999999999998887777888888888887776665443322


Q ss_pred             ccc-ccCCCCcchhhhhCCC--CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          189 FIY-CYEESEPKDLAILLPD--LEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       189 ~~~-~~~~~~~~~~~~~~~~--~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ... ..............+.  +++.+.+++++||..||++|||+.|+++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            211 1111111112222233  58999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=6.8e-39  Score=259.79  Aligned_cols=204  Identities=16%  Similarity=0.211  Sum_probs=160.1

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||+||+|++.. +  ++.||+|...    ........+..|..++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey   77 (320)
T cd05590           1 RVLGKGSFGKVMLARLKE-S--GRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEF   77 (320)
T ss_pred             CeeeeCCCeEEEEEEEcC-C--CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcC
Confidence            468999999999999877 5  7788999722    1233445667888888876 69999987    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++.+..   +.....+..|++.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (320)
T cd05590          78 VNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC  157 (320)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence            99999999886542   222233444999999999999999999999999998766                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|..||...+.......+...  .+                      
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~----------------------  213 (320)
T cd05590         158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EV----------------------  213 (320)
T ss_pred             cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CC----------------------
Confidence                          0112357999999999999999999887765554444331  00                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH------HHHhcCCCCcCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITV------NDALNHHYYRDVV  243 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~------~e~l~h~~~~~~~  243 (246)
                           ..+..+++++.+|+++||+.||.+||++      +++++||||+++.
T Consensus       214 -----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~  260 (320)
T cd05590         214 -----VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD  260 (320)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence                 0113468899999999999999999998      9999999998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=6.8e-39  Score=261.37  Aligned_cols=238  Identities=26%  Similarity=0.382  Sum_probs=184.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe--------cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK--------ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~   70 (246)
                      ++|++.+.||+|++|.||+|.... +  ++.|++|....   .......+.+|+.+++.++||||+++        ....
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~-~--~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTR-S--GKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcC-C--CCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCc
Confidence            479999999999999999999987 5  77889997222   22345577889999999999999987        1346


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ..++||||++ ++|.+++....   .........|++.||.|||++||+||||||+||+++.++                
T Consensus        82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  160 (334)
T cd07855          82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS  160 (334)
T ss_pred             eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence            7899999998 79988885432   222333344999999999999999999999999999765                


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                 .....+|+||+||++++|++|+.||.+.+...+...+....|.|+...+....
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~  240 (334)
T cd07855         161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG  240 (334)
T ss_pred             CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence                                       01123679999999999999999999888888888888888888766544332


Q ss_pred             Ccc--ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          185 TFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       185 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...  ......+......+....+..++++.+++++||+.||.+|||+.+++.||||++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence            211  11112222222333444567899999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-38  Score=258.07  Aligned_cols=214  Identities=15%  Similarity=0.195  Sum_probs=165.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+++... +  ++.||+|+..    ........+.+|+.++..++|+||+++    ...++.+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKN-T--GQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLY   77 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECC-C--CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEE
Confidence            589999999999999999999987 5  7789999832    222334567889999999999999987    5678999


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +||||+++++|.+++.+..    +.....+..||+.||.|||++||+||||||+|||++.++                  
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             EEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence            9999999999999996532    223333445999999999999999999999999997665                  


Q ss_pred             ------------Ce--------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 ------------YT--------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 ------------~~--------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                  .+              ...+|+||+||++++|++|+.||......+....+......           
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~-----------  226 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH-----------  226 (331)
T ss_pred             ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc-----------
Confidence                        01              12468999999999999999999876654444433321000           


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~  242 (246)
                                   .........+++++++|+++||..++.+  |+++.++++||||+++
T Consensus       227 -------------~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         227 -------------FQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             -------------ccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence                         0001112357899999999999765544  8899999999999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.1e-38  Score=263.14  Aligned_cols=213  Identities=18%  Similarity=0.242  Sum_probs=165.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.+|+|...    ........+.+|+.+++.++||||+++    ......+
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~-~--~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKS-T--RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  119 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECC-C--CcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            589999999999999999999987 6  7788888721    122234457789999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||||+++++|.+++....  +.....+..||+.||.|||++||+||||||+|||++.++                    
T Consensus       120 lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~  199 (371)
T cd05622         120 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR  199 (371)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc
Confidence            9999999999999987532  222233444999999999999999999999999998665                    


Q ss_pred             ----------C-------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 ----------Y-------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 ----------~-------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                .             ....+|+||+||++++|++|..||.+.+.......+........            
T Consensus       200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~------------  267 (371)
T cd05622         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT------------  267 (371)
T ss_pred             ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc------------
Confidence                      0             12357899999999999999999987766555544443111000            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~  242 (246)
                          ++         ....+++.+++|+.+||..++.+  |+++.|+++||||++.
T Consensus       268 ----~~---------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         268 ----FP---------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             ----CC---------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence                00         01367899999999999854443  7899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.3e-38  Score=258.59  Aligned_cols=207  Identities=19%  Similarity=0.281  Sum_probs=161.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhcccc-----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++.||+|+||.||+|+.......++.||+|+..     ........+.+|+.+++.++||||+++    ..++..|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            468999999999999875322237788999722     122334567789999999999999987    56678999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      |+++++|.+++.+..   +.....+..|++.||.|||++||+||||||+|||++.++                       
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            999999999986542   122233445999999999999999999999999998766                       


Q ss_pred             ------C---------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ------Y---------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ------~---------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                            .         ....+|+||+||++++|++|..||...+.......+...  .                      
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--~----------------------  216 (323)
T cd05584         161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--K----------------------  216 (323)
T ss_pred             CCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--C----------------------
Confidence                  0         112367999999999999999999876655444433321  0                      


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                           ...++.+++++.+|+.+||..||++||     ++.++++||||...
T Consensus       217 -----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         217 -----LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             -----CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence                 001245788999999999999999999     89999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=8.7e-39  Score=263.20  Aligned_cols=213  Identities=15%  Similarity=0.228  Sum_probs=165.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.... +  ++.||+|+..    ........+.+|+.++..++|++|+++    ...+..+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~   77 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKD-T--GHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLY   77 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            579999999999999999999987 5  7788999822    223345677889999999999999987    5678999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +||||++|++|.+++.+..   +.....+..|++.||.|||++||+||||||+|||++.++.                  
T Consensus        78 lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~  157 (360)
T cd05627          78 LIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT  157 (360)
T ss_pred             EEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence            9999999999999986532   2233334559999999999999999999999999976540                  


Q ss_pred             -------------------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCC
Q 036362          133 -------------------------------------------------------TVKIARLISVGCIFAEMVIQEPLSE  157 (246)
Q Consensus       133 -------------------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~  157 (246)
                                                                             ....+|+||+||++++|++|..||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~  237 (360)
T cd05627         158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (360)
T ss_pred             ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence                                                                   0123689999999999999999998


Q ss_pred             CCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC---CHHHHh
Q 036362          158 DASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI---TVNDAL  234 (246)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---s~~e~l  234 (246)
                      ..........+.......         .       ++.         ...+++++++|+.+|+ .||..|+   ++.|++
T Consensus       238 ~~~~~~~~~~i~~~~~~~---------~-------~p~---------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~  291 (360)
T cd05627         238 SETPQETYRKVMNWKETL---------V-------FPP---------EVPISEKAKDLILRFC-TDSENRIGSNGVEEIK  291 (360)
T ss_pred             CCCHHHHHHHHHcCCCce---------e-------cCC---------CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence            776554444433210000         0       000         0246889999999987 4999998   489999


Q ss_pred             cCCCCcCCC
Q 036362          235 NHHYYRDVV  243 (246)
Q Consensus       235 ~h~~~~~~~  243 (246)
                      +||||++++
T Consensus       292 ~hp~f~~~~  300 (360)
T cd05627         292 SHPFFEGVD  300 (360)
T ss_pred             cCCCCCCCC
Confidence            999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.1e-38  Score=253.06  Aligned_cols=213  Identities=16%  Similarity=0.226  Sum_probs=161.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|++.+.||+|+||.||++.+.. +  ++.||+|.....    ......+.+|+.+++.++|++|+.+    ...+..++
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~l   77 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRA-T--GKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcC-C--CceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEE
Confidence            48889999999999999999987 5  778898872211    1123456789999999999999988    55678999


Q ss_pred             EEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-----------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-----------------  132 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-----------------  132 (246)
                      +|||+++++|.+++.......+..     +..|++.||.|||++||+||||||+||+++.++.                 
T Consensus        78 v~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          78 VLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence            999999999999885433223332     3349999999999999999999999999986550                 


Q ss_pred             --------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          133 --------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       133 --------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                          ....+|+||+||++++|++|..||...................                 
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~-----------------  220 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-----------------  220 (285)
T ss_pred             ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh-----------------
Confidence                                0113689999999999999999998644321111111100000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                              ........++++.+|+++||+.||.+|||     ++|+++||||+++.
T Consensus       221 --------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05630         221 --------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQIN  268 (285)
T ss_pred             --------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccC
Confidence                    00112467889999999999999999999     99999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=9e-39  Score=254.54  Aligned_cols=206  Identities=17%  Similarity=0.175  Sum_probs=155.1

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||+|+||+||+|.+.. +  ++.+|+|....    .......+..|+.+++.++|+||+++    ......++||||+++
T Consensus         1 lg~G~~g~Vy~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   77 (280)
T cd05608           1 LGKGGFGEVSACQMRA-T--GKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNG   77 (280)
T ss_pred             CCCCCceeEEEEEEcc-C--CcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCC
Confidence            6999999999999877 5  77888887221    11223466789999999999999988    566789999999999


Q ss_pred             ccHHHHHhhhc--ccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC----------------------
Q 036362           82 LNLRKVIKNFL--DIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY----------------------  132 (246)
Q Consensus        82 ~~L~~~~~~~~--~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~----------------------  132 (246)
                      ++|.+++....  ...+.+     +..||+.||.|||++||+||||||+||+++.++.                      
T Consensus        78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence            99988874321  122222     3449999999999999999999999999986550                      


Q ss_pred             ----------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          133 ----------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       133 ----------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                      ....+|+||+||++++|++|+.||................-...                    
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------  217 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--------------------  217 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--------------------
Confidence                            01236799999999999999999976543222111111100000                    


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                           ...+..+++.+.+++.+||+.||++||     |++++++||||+++.
T Consensus       218 -----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~  264 (280)
T cd05608         218 -----VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN  264 (280)
T ss_pred             -----CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence                 011245789999999999999999999     889999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-39  Score=261.28  Aligned_cols=239  Identities=29%  Similarity=0.378  Sum_probs=181.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe---------cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK---------ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~   70 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|...  ........+.+|+.+++.++|+||+++         ....
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKP-T--GVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcC-C--CCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            589999999999999999999877 5  7789999732  222344567889999999999999987         1224


Q ss_pred             eEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      ..++++||++ ++|.+++...  .+.....+..|++.||.|||++||+||||||+||+++.++                 
T Consensus        82 ~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          82 DVYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             eEEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence            6899999999 7888887642  2223333455999999999999999999999999998655                 


Q ss_pred             -------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 -------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 -------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                               .....+|+||+||++++|++|++||.+.+.......+...++.+..+.+......
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL  240 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence                                     0112357999999999999999999888777777778887887766554332221


Q ss_pred             c--ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          187 F--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       187 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      .  .+....+......+....+..++++.+|+.+||+.||.+|||+.|+++||||+....
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence            1  111111222222233334567899999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.9e-38  Score=257.42  Aligned_cols=203  Identities=16%  Similarity=0.210  Sum_probs=159.4

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.||+|+...    .......+..|..++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~   77 (321)
T cd05591           1 KVLGKGSFGKVMLAELKG-T--DEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEY   77 (321)
T ss_pred             CccccCCCeEEEEEEECC-C--CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeC
Confidence            468999999999999977 5  77889998221    233345567788888866 79999987    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05591          78 VNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC  157 (321)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence            99999998886532   222233445999999999999999999999999998766                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|+.||...+.......+...  ..                      
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~--~~----------------------  213 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DV----------------------  213 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CC----------------------
Confidence                          0112357999999999999999999887765555444331  00                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCC-------CHHHHhcCCCCcCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERI-------TVNDALNHHYYRDV  242 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-------s~~e~l~h~~~~~~  242 (246)
                           ..+..+++++.+|+.+||+.||++||       +++++++||||..+
T Consensus       214 -----~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         214 -----LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             -----CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence                 00134688999999999999999999       99999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-40  Score=249.66  Aligned_cols=211  Identities=20%  Similarity=0.336  Sum_probs=168.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-----ccCCCCC----cchhhhhhcccccC-CCCceEEe----c
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-----DIIPDGV----PISILTKISPLKEM-DYPLIFRK----E   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-----~~~~~~~----~~~~~~E~~~l~~l-~~~~i~~~----~   67 (246)
                      ++|.=.+.||.|..++|-+|..+. +  +..+|+|+     ...+...    .+.-.+|+.+|+++ .||+|+++    +
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~-t--~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKE-T--GKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcc-c--ccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            457778889999999999999988 4  55666666     1111111    23445689999998 69999999    6


Q ss_pred             CCceEEEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------  138 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------  138 (246)
                      ..-++++|+|.++.|.|.|++..   .++.....++.|++.|+.|||.++|||||+||+|||++ +++..+++|      
T Consensus        94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld-dn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD-DNMNIKISDFGFACQ  172 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec-cccceEEeccceeec
Confidence            67789999999999999999965   34556666777999999999999999999999999999 555666666      


Q ss_pred             --------------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          139 --------------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       139 --------------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                            +|++|+|++.++.|.+||....+.-++..+.+.-        
T Consensus       173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk--------  244 (411)
T KOG0599|consen  173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK--------  244 (411)
T ss_pred             cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc--------
Confidence                                                  8999999999999999998776666666665521        


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                              +....++         |.+.|...+||+++||+.||++|.|++|+|.||||.+
T Consensus       245 --------yqF~spe---------Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  245 --------YQFRSPE---------WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             --------cccCCcc---------hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence                    1111122         3678999999999999999999999999999999954

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=4.1e-38  Score=254.13  Aligned_cols=235  Identities=29%  Similarity=0.482  Sum_probs=179.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe-----c-----
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK-----E-----   67 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~-----   67 (246)
                      +++|++.++||+|+||.||+|.+.. +  ++.+++|...   ..........+|+++++.++|+||+++     .     
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIK-T--GRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS   83 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECC-C--CcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence            4789999999999999999999877 5  6778888722   222234567889999999999999987     1     


Q ss_pred             --CCceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------
Q 036362           68 --NDKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        68 --~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------  131 (246)
                        .....+++++|++ ++|...+....    ......+..|+++||.|||++|++||||||+||+++.++          
T Consensus        84 ~~~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  162 (311)
T cd07866          84 KRKRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLA  162 (311)
T ss_pred             cccCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence              1245799999999 67877765421    223333444999999999999999999999999998654          


Q ss_pred             ------------------------------Ce----------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh
Q 036362          132 ------------------------------YT----------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRL  171 (246)
Q Consensus       132 ------------------------------~~----------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  171 (246)
                                                    .+          ...+|+||+||++++|++|++||.+.+.......+...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~  242 (311)
T cd07866         163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL  242 (311)
T ss_pred             hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence                                          00          12367999999999999999999988888888888888


Q ss_pred             hCCCCcCcCCCCCCcccccc-ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          172 MGEPSEETLPGVTTFFPFIY-CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .+.+.+..++.....+.... .................++.+.+|+.+||..||.+|||+.|+++||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            88877766655433332211 111112222333445677899999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=8.9e-38  Score=250.10  Aligned_cols=234  Identities=28%  Similarity=0.442  Sum_probs=174.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.... +  +..+++|....  .......+.+|+.+++.++|+||+++    ...+..++|
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   81 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRI-N--GQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV   81 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcC-C--CcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence            679999999999999999999877 5  77889998322  22333467889999999999999988    566789999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||++ ++|.+++....    .........|++.||.|||++|++|+||||+||+++.++                    
T Consensus        82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  160 (291)
T cd07870          82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY  160 (291)
T ss_pred             Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence            99998 78877765432    112233444999999999999999999999999997655                    


Q ss_pred             ---------Ceee----------EEEeehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 ---------YTVK----------IARLISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 ---------~~~~----------~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                               .+|+          .+|+||+||++++|++|..||..... .+.........+.|.+..++.....+.+..
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07870         161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP  240 (291)
T ss_pred             CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence                     0111          24799999999999999999976543 355666677777777766655544433322


Q ss_pred             ccC-CCCcchhhhhCC--CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYE-ESEPKDLAILLP--DLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~-~~~~~~~~~~~~--~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ... ..........+.  ..++++.+++.+||..||++|||+.|++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            111 111111222222  236789999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.2e-38  Score=258.62  Aligned_cols=239  Identities=29%  Similarity=0.400  Sum_probs=181.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----c-----CC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----E-----ND   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~-----~~   69 (246)
                      ++|.+.+.||+|+||.||+|++.. +  ++.|++|...   ........+.+|+.+++.++|+||+++    .     ..
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSE-T--NEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecC-C--CCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence            589999999999999999999877 6  7889999722   123334567889999999999999987    1     11


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      ...++++||++ ++|.+++....   +.....+..|++.||.|||++|++||||||+||+++.++               
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            45899999998 89988886532   222233444999999999999999999999999998655               


Q ss_pred             ------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 ------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 ------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                              .....+|+||+||++++|++|.+||.+.+.......+....|.+.+..+.......
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd07858         161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEK  240 (337)
T ss_pred             CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchh
Confidence                                    01123679999999999999999998887777777888888877765543222211


Q ss_pred             --ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          188 --PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       188 --~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                        .+....+...........+.+++++.+|+++||..||++|||++++++||||+.+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         241 ARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             hhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence              111111222222233344678999999999999999999999999999999988643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=4.9e-38  Score=256.06  Aligned_cols=215  Identities=15%  Similarity=0.206  Sum_probs=164.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+++... +  ++.+|+|...    ........+.+|+.++..++|++|+++    ......+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKN-A--DKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLY   77 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECC-C--CCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEE
Confidence            589999999999999999999977 5  6778888721    122233457789999999999999987    5678899


Q ss_pred             EEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +||||+++++|.+++.+...    .....+..||+.||.|||++||+||||||+|||++.++                  
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             EEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence            99999999999999976321    22333444999999999999999999999999998655                  


Q ss_pred             ------------Ce--------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 ------------YT--------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 ------------~~--------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                  .+              ...+|+||+||++++|++|+.||...+.......+.......          
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~----------  227 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF----------  227 (332)
T ss_pred             ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc----------
Confidence                        01              124689999999999999999998776555444443210000          


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~~  243 (246)
                                    ........+++++++|+++||..++.+  |++++|+++||||.++.
T Consensus       228 --------------~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         228 --------------QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             --------------cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence                          000112467899999999999765555  78999999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.6e-40  Score=248.00  Aligned_cols=198  Identities=22%  Similarity=0.320  Sum_probs=158.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe------cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~   72 (246)
                      .+|+|+++||.|.||.||++.+.. +  ++.+|.|.   ........+....|+.+|++|+||||+++      ++..-+
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~-~--g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLL-D--GKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeecc-C--cchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            469999999999999999999988 6  88889887   33344456788899999999999999998      445558


Q ss_pred             EEEEeccCcccHHHHHhhhc--ccccchHH-----HHHHHHHHHHhh--Cc--eeeccCCCCCeEEecCC----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIINNPKT-----AKILRVLSYYHS--NR--CLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~-----~qil~~L~~lH~--~~--i~H~Dikp~Nil~~~~~----------  131 (246)
                      ++|||+|++|||...++.+.  ...+++..     +|++.||..||+  ..  |+||||||.||+++..|          
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~  175 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG  175 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence            99999999999999997532  33444443     499999999999  45  99999999999999887          


Q ss_pred             ----------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          132 ----------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       132 ----------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                  .....+|+||+||+++||..=.+||.+.+-.+.-.+|... ..|+       
T Consensus       176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~-------  247 (375)
T KOG0591|consen  176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPP-------  247 (375)
T ss_pred             hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCC-------
Confidence                                        1223356999999999999999999998555555555552 1110       


Q ss_pred             CCccccccccCCCCcchhhhhC-CCCChHHHHHHHHhhhcCCCCCCCH
Q 036362          184 TTFFPFIYCYEESEPKDLAILL-PDLEPAGVDLLQKMLRVNPKERITV  230 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~dp~~R~s~  230 (246)
                                          .+ ...|.++..++..|+..||+.||+.
T Consensus       248 --------------------~p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  248 --------------------LPDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             --------------------CcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence                                01 2468899999999999999999985

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1e-38  Score=259.36  Aligned_cols=202  Identities=17%  Similarity=0.244  Sum_probs=158.8

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      +.||+|+||.||+|.+.. +  +..||+|...    ........+.+|+.+++.++||||+++    ...+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~   77 (325)
T cd05594           1 KLLGKGTFGKVILVKEKA-T--GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA   77 (325)
T ss_pred             CeeeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCC
Confidence            468999999999999877 5  7788999822    122334567789999999999999887    5677899999999


Q ss_pred             CcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCee---------------------
Q 036362           80 GLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTV---------------------  134 (246)
Q Consensus        80 ~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~---------------------  134 (246)
                      ++++|.+++....   +.....+..||+.||.|||+ +||+||||||+|||++.++ ..                     
T Consensus        78 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~-~~kL~Dfg~~~~~~~~~~~~~~~  156 (325)
T cd05594          78 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGATMKTF  156 (325)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC-CEEEecCCCCeecCCCCcccccc
Confidence            9999998886532   22333344499999999997 8999999999999998766 22                     


Q ss_pred             ------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          135 ------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       135 ------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                        ..+|+||+||++++|++|..||...+.......+...  ..                     
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--~~---------------------  213 (325)
T cd05594         157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EI---------------------  213 (325)
T ss_pred             cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--CC---------------------
Confidence                              2356999999999999999999876554333332210  00                     


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV  242 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~  242 (246)
                            ..+..+++++.+|+++||..||++|+     ++.++++||||.++
T Consensus       214 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         214 ------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             ------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence                  01245789999999999999999997     99999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.2e-38  Score=257.13  Aligned_cols=238  Identities=19%  Similarity=0.248  Sum_probs=164.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.++||+|+||.||++.+.. +  +..+++|....  .......+.+|+++++.++|+||+++    ...+..++|
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKP-S--GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECC-C--CcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence            689999999999999999999987 5  67788887222  22234568899999999999999998    567799999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++++|.+++....   ......+..|++.||.|||++ +++||||||+|||++.++ ..++               
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~-~~kL~Dfg~~~~~~~~~~~  160 (333)
T cd06650          82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN  160 (333)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC-CEEEeeCCcchhhhhhccc
Confidence            99999999999987532   222233444999999999975 799999999999998766 2233               


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHH-hhCCCCcCcC-CCCCCccccccc
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFR-LMGEPSEETL-PGVTTFFPFIYC  192 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~  192 (246)
                                            +|+||+||++++|++|+.||...........+.. ..+.+..... +...........
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (333)
T cd06650         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSS  240 (333)
T ss_pred             cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhh
Confidence                                  4599999999999999999976544322111110 0111111000 000000000000


Q ss_pred             c-CCCCc-c------------hhhhh-CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          193 Y-EESEP-K------------DLAIL-LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~-~~~~~-~------------~~~~~-~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      . +...+ .            ..... ....++++++|+.+||..||++|||+.|++.||||+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         241 YGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             hcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence            0 00000 0            00000 123678999999999999999999999999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.9e-38  Score=255.75  Aligned_cols=209  Identities=16%  Similarity=0.170  Sum_probs=163.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      +|++.+.||+|+||.||+|.+.. +  +..||+|....    ..........|..++..+ +|++|+++    ...+..+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~   77 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKG-T--DELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLY   77 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEE
Confidence            58999999999999999999987 5  77889997221    222334567778888777 57888876    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +||||+++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++                   
T Consensus        78 lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          78 FVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence            9999999999999886532   222333444999999999999999999999999998765                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||+||++++|++|..||.+.+.......+.....                   
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~-------------------  218 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-------------------  218 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------
Confidence                               011235699999999999999999988776555554443100                   


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-----HHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-----NDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-----~e~l~h~~~~~~~  243 (246)
                                ..+..+++++.+++.+||+.||.+|+++     .++++||||+.++
T Consensus       219 ----------~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~  264 (323)
T cd05616         219 ----------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  264 (323)
T ss_pred             ----------CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence                      0124578999999999999999999984     8999999998764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.8e-38  Score=261.37  Aligned_cols=236  Identities=16%  Similarity=0.141  Sum_probs=167.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .+|++++.||+|+||.||+|.... ...+..|++|....    .....+|+.+++.++||||+++    ......+++|+
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~-~~~~~~v~vK~~~~----~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHG-DEQRKKVIVKAVTG----GKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcC-CccceeEEEEeccc----cccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            369999999999999999998654 32366788887322    2345789999999999999998    45678999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      ++. ++|.+++....   ......+..||+.||.|||++||+||||||+|||++.++                       
T Consensus       167 ~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~  245 (392)
T PHA03207        167 KYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCY  245 (392)
T ss_pred             hcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccccc
Confidence            998 88988885432   222233444999999999999999999999999998665                       


Q ss_pred             --------Ce---------eeEEEeehhhHHHHHHhhCCCCCCCCc---chHHHHHHHHhhCCCCcCcCCCCCCc--ccc
Q 036362          132 --------YT---------VKIARLISVGCIFAEMVIQEPLSEDAS---ESRERISIFRLMGEPSEETLPGVTTF--FPF  189 (246)
Q Consensus       132 --------~~---------~~~~Di~slG~i~~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  189 (246)
                              .+         ...+|+||+||++++|++|..||.+..   ...++..+.+.++..+.+........  ..+
T Consensus       246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  325 (392)
T PHA03207        246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF  325 (392)
T ss_pred             ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence                    00         123679999999999999999987543   24456666666665443322111000  000


Q ss_pred             cc-ccCCCCcchhhhh--CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          190 IY-CYEESEPKDLAIL--LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~-~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .. .............  ...++.++++||.+||..||++|||+.|+|+||||+..+
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence            00 0000000000000  124678899999999999999999999999999999764

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.9e-38  Score=257.45  Aligned_cols=232  Identities=19%  Similarity=0.206  Sum_probs=160.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .+|++++.||+|+||.||+|+... +  +..||+|..     .......|+.+++.++|+||+++    ......++||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~valK~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPG-Q--PDPVVLKIG-----QKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECC-C--CceEEEEeC-----CccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            369999999999999999999977 5  778899972     22345679999999999999998    55678999999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      ++. ++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++                      
T Consensus       138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  216 (357)
T PHA03209        138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL  216 (357)
T ss_pred             ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence            998 789888865322    22233444999999999999999999999999998655                      


Q ss_pred             ------Cee---------eEEEeehhhHHHHHHhhC-CCCCCCCcc---------hHHHHHHHHhhCCCCcCcCCCCC--
Q 036362          132 ------YTV---------KIARLISVGCIFAEMVIQ-EPLSEDASE---------SRERISIFRLMGEPSEETLPGVT--  184 (246)
Q Consensus       132 ------~~~---------~~~Di~slG~i~~~l~~g-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--  184 (246)
                            .+|         ..+|+||+||++++|+++ .++|.....         ...+..+....+..+........  
T Consensus       217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  296 (357)
T PHA03209        217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSR  296 (357)
T ss_pred             cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccH
Confidence                  111         125699999999999985 444543221         12233344444443322221100  


Q ss_pred             Cccccccc--cCCCCcchh-hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFFPFIYC--YEESEPKDL-AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ....+...  ....+.... ......++.++.+||.+||+.||++|||+.|+|+||||+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        297 LVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             HHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence            00000000  000000000 00112567889999999999999999999999999999874

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-39  Score=257.14  Aligned_cols=210  Identities=25%  Similarity=0.364  Sum_probs=173.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      .|+.++.||+|.||.||+|.+.. +  ++.||+|+  ........+.+++|+.+|..++++||.++    -.+..++++|
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~-t--~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNK-T--KKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             ccccchhccccccceeeeeeecc-c--cceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence            57888999999999999999988 6  89999999  33444456789999999999999999877    5577899999


Q ss_pred             eccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           77 EYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |||.||++.+.++..   .+.....++++++.||.|||+++.+|||||+.|||+..+| ..++                 
T Consensus        91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g-~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG-DVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC-cEEEEecceeeeeechhhccc
Confidence            999999999999753   3456666777999999999999999999999999999886 3333                 


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                            +||||||++++||.+|.+|+.......                         .....+
T Consensus       170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-------------------------vlflIp  224 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-------------------------VLFLIP  224 (467)
T ss_pred             cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce-------------------------EEEecc
Confidence                                  349999999999999999998654421                         112233


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      +..++.+.   ..+++.+++|++.||.+||+.||||.++|+|+|++...+
T Consensus       225 k~~PP~L~---~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k  271 (467)
T KOG0201|consen  225 KSAPPRLD---GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKK  271 (467)
T ss_pred             CCCCCccc---cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCC
Confidence            33333322   378999999999999999999999999999999998543

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-38  Score=257.31  Aligned_cols=209  Identities=22%  Similarity=0.315  Sum_probs=175.4

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~   72 (246)
                      |++|..++.+|+|+||.++.++++. .  ...+++|.   ............+|+.++++++||||+.+     .++...
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~-~--~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l   79 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKS-D--DKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLL   79 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhcc-C--CceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceE
Confidence            6899999999999999999999987 5  66778887   34445556688999999999999999998     344459


Q ss_pred             EEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT--------------  133 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~--------------  133 (246)
                      +|+|+||+||++.+.+.+.....++     .++.|++.||.|||+++|+|||||+.||++..++..              
T Consensus        80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            9999999999999999765433333     345599999999999999999999999999988711              


Q ss_pred             ------------------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          134 ------------------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       134 ------------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                              ...+|+|||||.++||.+-+++|.+.+......++......|.+            
T Consensus       160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp------------  227 (426)
T KOG0589|consen  160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP------------  227 (426)
T ss_pred             hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC------------
Confidence                                    22245999999999999999999999888888888875544332            


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                      ...+.+++.+++.||..+|..||++.++|.+|...
T Consensus       228 ----------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  228 ----------------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             ----------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence                            56789999999999999999999999999998765

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-38  Score=241.09  Aligned_cols=212  Identities=19%  Similarity=0.200  Sum_probs=168.6

Q ss_pred             CCcccee-eeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe--------cCCce
Q 036362            2 EKYRKVE-LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK--------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~-~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~--------~~~~~   71 (246)
                      ++|++.. +||-|-.|+|-.|.++. +  ++.+|+|+.    .+.....+|+++-... .|||||.+        ...+.
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~-T--~ekfALKvL----~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKR-T--QEKFALKVL----LDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             hhheehhhhhccccCCceEEEEecc-c--hhhhHHHHH----hcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            5676654 78999999999999988 7  999999993    3445778888877766 59999998        34577


Q ss_pred             EEEEEeccCcccHHHHHhhhc-----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL-----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      +.+|||.++||.|++.++...     +....+++.||..|+.|||+.+|.||||||+|+|+...+               
T Consensus       134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~  213 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE  213 (400)
T ss_pred             eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccc
Confidence            889999999999999997643     455566667999999999999999999999999998665               


Q ss_pred             -------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcch----HHHHHHHH-hhCCCCcCcCC
Q 036362          132 -------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASES----RERISIFR-LMGEPSEETLP  181 (246)
Q Consensus       132 -------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~  181 (246)
                                               ...+.+|+||+||++|-|+.|.+||......    .+..+|.. .++.|.+    
T Consensus       214 t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p----  289 (400)
T KOG0604|consen  214 TQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP----  289 (400)
T ss_pred             cCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh----
Confidence                                     2345566999999999999999999764432    12222221 1111222    


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP  246 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  246 (246)
                                            .|..+|++++|+|+.+|..+|++|+|+.++++|||+.+-..+|
T Consensus       290 ----------------------EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp  332 (400)
T KOG0604|consen  290 ----------------------EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVP  332 (400)
T ss_pred             ----------------------hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCC
Confidence                                  1357899999999999999999999999999999999876654

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=7.8e-38  Score=250.57  Aligned_cols=214  Identities=19%  Similarity=0.239  Sum_probs=165.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +.|+++++||+|+||.||+|++.. +  +..+++|... ........+.+|+.+++.++|+||+++    ...+..++||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKE-T--GALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI   88 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECC-C--CceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence            469999999999999999999977 5  7788888832 222335567889999999999999998    4567899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      ||+++++|..++.+..    ......+..|++.||.|||++|++||||||+||+++.++                     
T Consensus        89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  168 (292)
T cd06644          89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD  168 (292)
T ss_pred             ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence            9999999988875432    222233344999999999999999999999999998655                     


Q ss_pred             --------Ceee--------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          132 --------YTVK--------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       132 --------~~~~--------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                              .+|+              .+|+|||||++++|++|..||...........+..   ...+.           
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------  234 (292)
T cd06644         169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SEPPT-----------  234 (292)
T ss_pred             eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc---CCCcc-----------
Confidence                    1122              26899999999999999999976554333222221   11000           


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                  ......++.++.+++.+||..||++||++.++++||||..+.+
T Consensus       235 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         235 ------------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             ------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence                        0011356789999999999999999999999999999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-38  Score=253.48  Aligned_cols=213  Identities=19%  Similarity=0.263  Sum_probs=167.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||.|+||.||++.+.. +  +..+++|... ........+.+|+.+++.++|+||+++    ..+...++||
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKE-T--GLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI   81 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcC-C--CcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence            579999999999999999999876 5  7788999832 222334578889999999999999998    5677899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      ||+++++|.+++....    +.....+..|++.||.|||++||+||||||+||+++.++                     
T Consensus        82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  161 (280)
T cd06611          82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD  161 (280)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence            9999999999986532    223333444999999999999999999999999998655                     


Q ss_pred             --------Cee--------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          132 --------YTV--------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       132 --------~~~--------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                              .+|              ..+|+||+|+++++|++|..||...........+..  +.+..            
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~------------  227 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--SEPPT------------  227 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--CCCCC------------
Confidence                    011              137899999999999999999987654433332222  11000            


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                  ......++.++.+++.+||..||..|||+.++++||||.+..
T Consensus       228 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         228 ------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             ------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence                        001135788999999999999999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.1e-37  Score=247.21  Aligned_cols=235  Identities=23%  Similarity=0.408  Sum_probs=170.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|++|.||+|.+.. +  ++.|++|....   .......+.+|+.+++.++|+||+++    ......++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   77 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRE-T--GQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHL   77 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECC-C--CcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEE
Confidence            589999999999999999999876 5  77899997322   22334567899999999999999998    55678999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +|||+++++|..++....   .........|++.||.|||++|++||||||+||+++.++                    
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07847          78 VFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY  157 (286)
T ss_pred             EEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence            999999888877765422   222233444999999999999999999999999998655                    


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC--Cccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT--TFFPFI  190 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  190 (246)
                                         .....+|+||+|+++++|++|..||.+....+....+....+.-.+....-..  .+....
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL  237 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence                               01124679999999999999999998777665555555444332211000000  000000


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ...............+.++..+.+|+.+||..||++|||+.|++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            0000011111223345678999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=7.6e-38  Score=248.84  Aligned_cols=206  Identities=17%  Similarity=0.204  Sum_probs=153.5

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||+|+||.||+++... +  ++.||+|....    ..........|+++++.++||||+++    ..+.+.++||||++|
T Consensus         1 lg~G~~g~Vy~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g   77 (277)
T cd05607           1 LGKGGFGEVCAVQVKN-T--GKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNG   77 (277)
T ss_pred             CCCCCceEEEEEEEcc-C--CcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCC
Confidence            6999999999999987 5  77888887221    11223455679999999999999998    567889999999999


Q ss_pred             ccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---------------------
Q 036362           82 LNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---------------------  135 (246)
Q Consensus        82 ~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---------------------  135 (246)
                      ++|.+++.......+.     .+..|++.||.|||++|++||||||+||+++.++ ..+                     
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~-~~~l~Dfg~~~~~~~~~~~~~~~~  156 (277)
T cd05607          78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG-NCRLSDLGLAVELKDGKTITQRAG  156 (277)
T ss_pred             CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC-CEEEeeceeeeecCCCceeeccCC
Confidence            9999888543322222     2334999999999999999999999999998665 122                     


Q ss_pred             -----------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          136 -----------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       136 -----------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                       .+|+||+||++++|++|..||...........+....-..                   .   
T Consensus       157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------~---  214 (277)
T cd05607         157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED-------------------E---  214 (277)
T ss_pred             CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc-------------------c---
Confidence                             3569999999999999999997543321111111110000                   0   


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCCCH----HHHhcCCCCcCCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERITV----NDALNHHYYRDVV  243 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~----~e~l~h~~~~~~~  243 (246)
                        .......+++++.+|+++||+.||.+|||+    ++++.||||+.++
T Consensus       215 --~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~  261 (277)
T cd05607         215 --VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN  261 (277)
T ss_pred             --cccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence              000013578899999999999999999999    6788999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.8e-38  Score=254.99  Aligned_cols=204  Identities=17%  Similarity=0.197  Sum_probs=156.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  +..||+|....    ..........|..++..+ +||+|+++    ...+..|+||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~   77 (316)
T cd05620           1 KVLGKGSFGKVLLAELKG-K--GEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEF   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECC
Confidence            479999999999999987 5  77889987221    123445667787777754 89999987    567899999999


Q ss_pred             cCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++.....   .....+..|++.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05620          78 LNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC  157 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence            999999998865422   12223344999999999999999999999999998765                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|..||.+.+.......+..  +.+                      
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~--~~~----------------------  213 (316)
T cd05620         158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV--DTP----------------------  213 (316)
T ss_pred             CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCC----------------------
Confidence                          011236799999999999999999987665444333322  110                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-HHHhcCCCCcCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-NDALNHHYYRDVV  243 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-~e~l~h~~~~~~~  243 (246)
                           ..+..+++++++|+++||..||++||++ +++++||||+.+.
T Consensus       214 -----~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         214 -----HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence                 0113468899999999999999999998 5899999998863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.8e-38  Score=257.21  Aligned_cols=207  Identities=17%  Similarity=0.221  Sum_probs=160.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      ++.||+|+||.||+++.......+..+|+|+...   .......+.+|+.++++++||||+++    ...+..|+||||+
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            3689999999999998743122277889997221   22234567789999999999999998    5678899999999


Q ss_pred             CcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           80 GLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        80 ~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ++++|.+++.+..   +.....++.||+.||.|||++||+||||||+||+++.++                         
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  160 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG  160 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence            9999999986532   223333445999999999999999999999999998665                         


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 -------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                   .....+|+||+||++++|++|+.||...+.......+.....                         
T Consensus       161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-------------------------  215 (318)
T cd05582         161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-------------------------  215 (318)
T ss_pred             ChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-------------------------
Confidence                         012235699999999999999999987665544443332100                         


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDV  242 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~  242 (246)
                          ..++.+++.+.+|+++||+.||++|||     +.++++||||+.+
T Consensus       216 ----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         216 ----GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             ----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence                012457899999999999999999999     6779999999875

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-39  Score=250.32  Aligned_cols=239  Identities=22%  Similarity=0.321  Sum_probs=182.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-C-Cc----eEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-Y-PL----IFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~-~~----i~~~----~~~~~   71 (246)
                      ++|.+++++|+|.||+|-.|.+.. +  +..||+|+........+...-|+++++++. + |+    ++.+    ...++
T Consensus        89 ~Ry~i~~~lGeGtFGkV~ec~D~~-~--~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   89 NRYEIVDLLGEGTFGKVVECWDRE-T--KEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cceehhhhhcCCcccceEEEeecC-C--CceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            589999999999999999999988 6  788999997777778888999999999994 2 22    3444    67899


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      .|+|+|.++ .|+.+++.+++...++-.     ..|+++++++||+.+++|.|+||+|||+-+..               
T Consensus       166 iCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  166 ICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             eEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceec
Confidence            999999998 999999998665555443     33999999999999999999999999986544               


Q ss_pred             ----CeeeE------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh
Q 036362          132 ----YTVKI------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRL  171 (246)
Q Consensus       132 ----~~~~~------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  171 (246)
                          ..+++                                    +|+||+|||+.|+++|...|...++.+.++.+.+.
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence                12233                                    34999999999999999999999999999999999


Q ss_pred             hCCCCcCcCCCCCCccccccccCCC--------------CcchhhhhCCCC---ChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          172 MGEPSEETLPGVTTFFPFIYCYEES--------------EPKDLAILLPDL---EPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~---~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                      +|+.+...........-+....-+|              .+..+.......   -.++.||+++||.+||++|+|+.|+|
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence            9965544333221111111111111              111111111112   24588999999999999999999999


Q ss_pred             cCCCCcCCCC
Q 036362          235 NHHYYRDVVS  244 (246)
Q Consensus       235 ~h~~~~~~~~  244 (246)
                      +||||+....
T Consensus       405 ~HpFF~~~~~  414 (415)
T KOG0671|consen  405 SHPFFARLTP  414 (415)
T ss_pred             cCHHhhcCCC
Confidence            9999998754

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-38  Score=250.29  Aligned_cols=232  Identities=38%  Similarity=0.663  Sum_probs=190.6

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      |++.+.||+|++|.||+|.... +  ++.+++|....   .......+.+|+.+++.++|+|++++    ......++|+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   77 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKK-T--GEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVF   77 (282)
T ss_pred             CeeehcccccCcceEEEeeecC-C--CcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEe
Confidence            6788999999999999999987 5  77889998332   24445677889999999999999998    5568999999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      ||++ ++|.+++.+..    .......+.|++.||.|||++||+||||+|+||+++.++                     
T Consensus        78 e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  156 (282)
T cd07829          78 EYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYT  156 (282)
T ss_pred             cCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccC
Confidence            9999 69999997652    222233344999999999999999999999999998655                     


Q ss_pred             --------Cee----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 --------YTV----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 --------~~~----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                              .+|          ..+|+||+||+++++++|.+||...........+.+..+.+.+..|........+...+
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07829         157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF  236 (282)
T ss_pred             ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence                    011          13679999999999999999999988888888899999998888877766665455555


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      +.+.........+..++++.+++++||..||++||++.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            5555555555566779999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.9e-38  Score=255.19  Aligned_cols=203  Identities=18%  Similarity=0.223  Sum_probs=159.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  +..||+|...    ........+.+|+.++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~   77 (318)
T cd05570           1 KVLGKGSFGKVLLAELKG-T--DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEY   77 (318)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            469999999999999977 5  7788998722    1233445677888888877 69999998    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee---------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV---------------------  134 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~---------------------  134 (246)
                      +++++|.+++.+..   +.....+..|++.||.|||++||+||||||+||+++.++ ..                     
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~~~~~~~  156 (318)
T cd05570          78 VNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG-HIKIADFGMCKEGILGGVTTSTF  156 (318)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC-cEEecccCCCeecCcCCCcccce
Confidence            99999998886542   222233444999999999999999999999999998665 11                     


Q ss_pred             ------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          135 ------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       135 ------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                        ..+|+||+||++++|++|..||.+.+.......+...  .+                     
T Consensus       157 ~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~---------------------  213 (318)
T cd05570         157 CGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--EV---------------------  213 (318)
T ss_pred             ecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CC---------------------
Confidence                              2357999999999999999999876654443333220  00                     


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-----HHHhcCCCCcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-----NDALNHHYYRDVV  243 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-----~e~l~h~~~~~~~  243 (246)
                            ..+..+++++.+|+++||..||.+|||+     .++++||||+++.
T Consensus       214 ------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~  259 (318)
T cd05570         214 ------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID  259 (318)
T ss_pred             ------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence                  0124578999999999999999999999     9999999998863

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=5.5e-38  Score=256.76  Aligned_cols=237  Identities=26%  Similarity=0.362  Sum_probs=172.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cC--------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----EN--------   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~--------   68 (246)
                      ++|++.+.||.|+||.||+|.+.. +  +..|++|.. .........+.+|+.+++.++||||+++    ..        
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~-~--~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSD-C--DKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECC-C--CcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence            589999999999999999999987 5  778888872 2223345678899999999999999987    11        


Q ss_pred             ------CceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe-------
Q 036362           69 ------DKLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT-------  133 (246)
Q Consensus        69 ------~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~-------  133 (246)
                            ....++++||++ ++|.+++...  .+.....++.||+.||.|||++|++||||||+||+++.++..       
T Consensus        82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg  160 (342)
T cd07854          82 VGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG  160 (342)
T ss_pred             cccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence                  135799999999 7998887542  233334445599999999999999999999999999744311       


Q ss_pred             ------------------------------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          134 ------------------------------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       134 ------------------------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                          ...+|+|||||++++|++|+.||.+.........+......+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  240 (342)
T cd07854         161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE  240 (342)
T ss_pred             cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence                                                12367999999999999999999887776666555554333222


Q ss_pred             CcCCCCCCc-cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          178 ETLPGVTTF-FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       178 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ......... +..................+.++.++.+|+++||..||.+|||+.++++||||+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence            221111111 11111011111122333445788999999999999999999999999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=8.6e-38  Score=254.27  Aligned_cols=207  Identities=16%  Similarity=0.202  Sum_probs=154.8

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.||+|+..    ........+.+|..++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~--~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~   77 (329)
T cd05588           1 RVIGRGSYAKVLLVELKK-T--RRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEF   77 (329)
T ss_pred             CeEeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeC
Confidence            478999999999999987 5  7788999822    1222345678899999888 79999988    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (329)
T cd05588          78 VSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC  157 (329)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence            99999998886532   223333444999999999999999999999999998665                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchH-----HHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESR-----ERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                    .....+|+||+||++++|++|+.||.......     ...........                  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~------------------  219 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE------------------  219 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc------------------
Confidence                          01123679999999999999999996321100     00000000000                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC------HHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT------VNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s------~~e~l~h~~~~~~  242 (246)
                             .....+..+++++.+++.+||..||.+|+|      ++++++||||+++
T Consensus       220 -------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         220 -------KQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             -------CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence                   000122467899999999999999999997      7899999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=7.7e-38  Score=253.17  Aligned_cols=204  Identities=20%  Similarity=0.225  Sum_probs=157.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.||+|....    ..........|..++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey   77 (316)
T cd05619           1 KMLGKGSFGKVFLAELKG-T--NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEY   77 (316)
T ss_pred             CeeeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeC
Confidence            479999999999999987 5  77889997221    123345566777787764 89999987    567789999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++....   ......+..|++.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05619          78 LNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC  157 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence            99999999987532   222333445999999999999999999999999998665                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|..||.+.+.......+..  +.+.                     
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~--~~~~---------------------  214 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM--DNPC---------------------  214 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCC---------------------
Confidence                          011235699999999999999999987665443333221  1000                     


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHH-HHhcCCCCcCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVN-DALNHHYYRDVV  243 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~-e~l~h~~~~~~~  243 (246)
                            .+..++.++.+|+.+||..||.+||++. ++++||||+++.
T Consensus       215 ------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         215 ------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID  255 (316)
T ss_pred             ------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence                  0134678999999999999999999996 899999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.3e-38  Score=255.71  Aligned_cols=239  Identities=30%  Similarity=0.390  Sum_probs=186.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCC-----c
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----END-----K   70 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~-----~   70 (246)
                      +|++.+.||.|++|.||+|++.. +  +..+++|....   .......+.+|+.+++.++|+||+++    ...     .
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKR-T--GRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN   77 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCC-C--CcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence            68999999999999999999876 5  77889987222   13345678899999999999999998    222     4


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ..|++|+|++ ++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++                
T Consensus        78 ~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          78 DVYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             ceEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            7899999999 78988886542   112223444999999999999999999999999999765                


Q ss_pred             ----------------Cee----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC--C
Q 036362          132 ----------------YTV----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG--V  183 (246)
Q Consensus       132 ----------------~~~----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  183 (246)
                                      .+|          ..+|+||+|+++++|++|.+||.+.+.......+....+.+....+..  .
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS  236 (330)
T ss_pred             ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence                            001          136799999999999999999999888888888888888877665432  1


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                      .....+...........+....+..++++.+|+.+||+.||.+|||+.++++||||+++...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            22222223333334444555566789999999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=5.2e-38  Score=254.99  Aligned_cols=203  Identities=18%  Similarity=0.267  Sum_probs=156.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhc-ccccCCCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKIS-PLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~-~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||+||+|++.. +  ++.||+|....    .......+.+|.. +++.++||||+++    ...+..++||||
T Consensus         1 ~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~   77 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKA-D--GKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDY   77 (323)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcC
Confidence            479999999999999987 5  78899998221    1222334555554 4577899999988    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee---------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV---------------------  134 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~---------------------  134 (246)
                      +++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++ ..                     
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~~~~~  156 (323)
T cd05575          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGIEHSKTTSTF  156 (323)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC-cEEEeccCCCcccccCCCccccc
Confidence            99999999886532   222233445999999999999999999999999998765 11                     


Q ss_pred             ------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          135 ------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       135 ------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                        ..+|+|||||++++|++|..||...+.......+...   +                     
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~---~---------------------  212 (323)
T cd05575         157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK---P---------------------  212 (323)
T ss_pred             cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC---C---------------------
Confidence                              2357999999999999999999876654444433321   0                     


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH----HHHhcCCCCcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV----NDALNHHYYRDVV  243 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~----~e~l~h~~~~~~~  243 (246)
                           ....+..++++.+++++||+.||.+||++    .++++||||..+.
T Consensus       213 -----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~  258 (323)
T cd05575         213 -----LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN  258 (323)
T ss_pred             -----CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCC
Confidence                 00124678999999999999999999998    6999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.6e-37  Score=247.42  Aligned_cols=231  Identities=26%  Similarity=0.407  Sum_probs=171.3

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCC-CCceEEe----cCC--ceEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMD-YPLIFRK----END--KLVYQ   74 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~--~~~~l   74 (246)
                      |++.+.||+|+||.||+|.+.. +  +..+|+|....  .........+|+.++..+. |+||+++    .+.  +..++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~-~--~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRK-T--GKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcC-C--CcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence            7889999999999999999876 5  77888887322  1222334457888888885 9999988    333  78999


Q ss_pred             EEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      ||||++ ++|.+.+....    ......+..|++.||.|||++|++||||||+||+++. +                   
T Consensus        78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~  155 (282)
T cd07831          78 VFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY  155 (282)
T ss_pred             EEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCc
Confidence            999999 68888876532    2222334449999999999999999999999999986 4                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||+||++++|++|.+||.+.+..+....+....+.+...+.............
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence                               0123467999999999999999999988877777777777777665432111111111111


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .+...........+..+.++.+++.+||..||++|||++++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            22222222333345679999999999999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.7e-38  Score=267.86  Aligned_cols=209  Identities=19%  Similarity=0.198  Sum_probs=163.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .|.+.+.||+|++|.||.|....+.  +..|++|.. .........+.+|+.+++.++||||+++    ...+..++|||
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~--~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDP--KEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCC--CeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            4899999999999999999887643  456777762 2222334567789999999999999998    56789999999


Q ss_pred             ccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           78 YTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      |++|++|.+++....  ...+     ..++.|++.||.|||++||+||||||+|||++.++ ..++              
T Consensus       146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~-~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG-IIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC-cEEEEeCcCceecCCccc
Confidence            999999998875421  1122     23444999999999999999999999999999766 2233              


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                 +|+||+||++++|++|..||...+.......+...  ...             
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~--~~~-------------  289 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG--KYD-------------  289 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCC-------------
Confidence                                       45999999999999999999876655444443331  100             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                   ..+..+++++.+|+.+||..||+.|||+.+++.|||++.+
T Consensus       290 -------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        290 -------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV  329 (478)
T ss_pred             -------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence                         0113578899999999999999999999999999998754

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.4e-38  Score=252.98  Aligned_cols=203  Identities=18%  Similarity=0.227  Sum_probs=155.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.||+|....    ..........|..++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~   77 (316)
T cd05592           1 KVLGKGSFGKVMLAELKG-T--NEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEY   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcC
Confidence            479999999999999977 5  77889997221    223344556677776654 79999988    567789999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      ++|++|.+++....   ......+..||+.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  157 (316)
T cd05592          78 LNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC  157 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence            99999999886532   222333445999999999999999999999999998765                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|..||.+.+.......+...  .+                      
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~----------------------  213 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RP----------------------  213 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CC----------------------
Confidence                          0112357999999999999999999877665444433221  00                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-HHHhcCCCCcCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-NDALNHHYYRDV  242 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-~e~l~h~~~~~~  242 (246)
                           ..+..+++++.+|+.+||..||.+||++ .++++||||+.+
T Consensus       214 -----~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         214 -----HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence                 0113578899999999999999999986 588999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.1e-37  Score=249.89  Aligned_cols=235  Identities=26%  Similarity=0.408  Sum_probs=173.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----c------
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----E------   67 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~------   67 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..||+|...   ..........+|+.+++.++||||+++    .      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKK-T--KQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY   87 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECC-C--CcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence            4689999999999999999999877 5  7788998722   222233456789999999999999987    1      


Q ss_pred             --CCceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------
Q 036362           68 --NDKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        68 --~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------  131 (246)
                        .....++||||++ ++|.+++.+..    ......+..|++.||.|||++|++|+||||+||+++.++          
T Consensus        88 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          88 NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence              1346799999998 68888876532    222233444999999999999999999999999998655          


Q ss_pred             -----------------------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          132 -----------------------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       132 -----------------------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                             .          ....+|+||+|+++++|++|.+||...+.......+....|..+++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE  246 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence                                   0          0123679999999999999999998887777777777777776666


Q ss_pred             cCCCCCCcccccc-ccCCCCcchh-hhhC-CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          179 TLPGVTTFFPFIY-CYEESEPKDL-AILL-PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       179 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~-~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .++.......+.. ..+....... .... ...++.+.+|+.+||..||.+|||++|+++||||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            5554433222111 0111100011 1111 1246788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.9e-37  Score=243.49  Aligned_cols=206  Identities=15%  Similarity=0.165  Sum_probs=163.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|++|.||+|.+.. +  +..|++|...   ........+.+|+.+++.++||||+++    ...+..+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKA-D--KRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIV   77 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcC-C--CcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEE
Confidence            58899999999999999999987 5  7778888722   234456788899999999999999998    556789999


Q ss_pred             EeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |||+++++|.+++.......+..     +..|++.||.|||++|++||||||+||+++.++                   
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~  157 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF  157 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence            99999999999997653333333     333999999999999999999999999998755                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||||+++++|++|..||...+.......+...  ...                
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------  219 (256)
T cd08529         158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG--VFP----------------  219 (256)
T ss_pred             hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCC----------------
Confidence                               0112478999999999999999999876654433333221  000                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                ......++++.+++++||+.+|++||++.++++|||+
T Consensus       220 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         220 ----------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             ----------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence                      0112567899999999999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=4.3e-38  Score=258.48  Aligned_cols=236  Identities=22%  Similarity=0.243  Sum_probs=173.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----c------C
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----E------N   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~------~   68 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..||+|....   .......+.+|+.+++.++|+||+++    .      .
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTV-T--GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECC-C--CCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            679999999999999999999987 5  77889997321   22234567789999999999999987    1      1


Q ss_pred             CceEEEEEeccCcccHHHHHhhh-cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNF-LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ....|+||||++ ++|.+.+... .......++.|++.||.|||++|++||||||+||+++.++                
T Consensus        93 ~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  171 (353)
T cd07850          93 FQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  171 (353)
T ss_pred             cCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence            246799999998 7888887542 2333344555999999999999999999999999998765                


Q ss_pred             ---------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc-cc
Q 036362          132 ---------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF-PF  189 (246)
Q Consensus       132 ---------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  189 (246)
                                           .....+|+||+||++++|++|+.||...+.......+...++.|..+......... .+
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (353)
T cd07850         172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNY  251 (353)
T ss_pred             CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHH
Confidence                                 01122579999999999999999999888777788888877877654322211110 00


Q ss_pred             ccccCCCCcchh-------------hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          190 IYCYEESEPKDL-------------AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       190 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ...........+             .......++.+++|+.+||..||++|||+.|+|+||||+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         252 VENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             hhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence            000000000000             0012235678999999999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.8e-37  Score=252.66  Aligned_cols=214  Identities=14%  Similarity=0.216  Sum_probs=164.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||++++.. +  ++.||+|....    .......+.+|+.++..++|++|+.+    ...+..|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~   77 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKH-T--ERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLY   77 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            689999999999999999999877 5  77889997321    22234457788999999999999987    5678999


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +||||++|++|.+++.+..    +.....+..|++.||.|||++||+||||||+|||++.++                  
T Consensus        78 lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             EEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            9999999999999997632    122233444999999999999999999999999998665                  


Q ss_pred             ------------Ce--------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 ------------YT--------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 ------------~~--------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                  .+              ...+|+||+||++++|++|+.||...+.......+.......          
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~----------  227 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF----------  227 (331)
T ss_pred             eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc----------
Confidence                        01              124689999999999999999998766544444333210000          


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~  242 (246)
                                    ........+++++++|+.+||..++++  |++++++++||||+++
T Consensus       228 --------------~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         228 --------------QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             --------------cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence                          001112457899999999999876655  5799999999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=6.1e-38  Score=266.93  Aligned_cols=209  Identities=16%  Similarity=0.223  Sum_probs=163.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEec------C----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRKE------N----   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~~------~----   68 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|...   ........+.+|+.++..++|+||+++.      +    
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~-~--g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVS-D--GEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcC-C--CCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            589999999999999999999877 5  7889999832   2223345678899999999999999871      1    


Q ss_pred             --CceEEEEEeccCcccHHHHHhhhc--ccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---
Q 036362           69 --DKLVYQIFEYTGLLNLRKVIKNFL--DIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---  136 (246)
Q Consensus        69 --~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---  136 (246)
                        ....++||||+++++|.+++....  ...+.+     +..|++.||.|||++||+||||||+|||++.++ ..++   
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~-~vkL~DF  187 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG-LVKLGDF  187 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC-CEEEEec
Confidence              114789999999999999986422  122332     444999999999999999999999999998665 2222   


Q ss_pred             --------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          137 --------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       137 --------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                            +|+|||||++++|++|..||.+.+.......+...  ..   
T Consensus       188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~--~~---  262 (496)
T PTZ00283        188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG--RY---  262 (496)
T ss_pred             ccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CC---
Confidence                                                  45999999999999999999876554443333221  00   


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                             ...++.+++++.+++.+||..||.+|||+.++++|||++..
T Consensus       263 -----------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        263 -----------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             -----------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence                                   00125678999999999999999999999999999998764

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=8.8e-38  Score=250.73  Aligned_cols=214  Identities=20%  Similarity=0.265  Sum_probs=165.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      .+|++.+.||+|++|.||++.+.. +  +..+++|.. .........+.+|+.+++.++|+||+++    ..+...++||
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVA-T--GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECC-C--CcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence            579999999999999999999876 5  677888872 2233345678889999999999999998    4567899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      ||+++++|.+++.+..  ......+..|++.||.|||++||+||||||+||+++.++                       
T Consensus        97 e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  176 (296)
T cd06654          97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  176 (296)
T ss_pred             cccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcc
Confidence            9999999999986532  222333444999999999999999999999999998655                       


Q ss_pred             ---------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ---------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ---------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                     .....+|+|||||++++|++|..||.............. .+.+.                    
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~--------------------  235 (296)
T cd06654         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPE--------------------  235 (296)
T ss_pred             cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCCC--------------------
Confidence                           011236799999999999999999976654332222111 01000                    


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                           ......+++.+.+++.+||..||+.|||+.++++||||....+
T Consensus       236 -----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         236 -----LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             -----CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence                 0011357789999999999999999999999999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=5.3e-37  Score=241.20  Aligned_cols=206  Identities=18%  Similarity=0.241  Sum_probs=160.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe-----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~l   74 (246)
                      .|++.+.||+|++|.||++.+.. +  ++.+++|....   .......+.+|+.+++.++|+|++++     ......++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRT-D--GKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcC-C--CcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEE
Confidence            58999999999999999999977 5  67788887322   22334568889999999999999987     23456899


Q ss_pred             EEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++||+++++|.+++.......++     .++.|++.||.+||++|++||||||+||+++.++                  
T Consensus        78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~  157 (257)
T cd08223          78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD  157 (257)
T ss_pred             EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence            99999999999998753322222     3344999999999999999999999999998655                  


Q ss_pred             -----------C---------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 -----------Y---------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 -----------~---------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                 .         ....+|+||+|+++++|++|..||...+.......+...  ..                
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~--~~----------------  219 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG--KL----------------  219 (257)
T ss_pred             ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--CC----------------
Confidence                       0         012367999999999999999999866544333322221  00                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                .......++++.+|+.+|+..||..|||+.+++.||||
T Consensus       220 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         220 ----------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ----------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                      00114578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.5e-37  Score=246.84  Aligned_cols=213  Identities=16%  Similarity=0.220  Sum_probs=163.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|+..+.||+|+||+||.+.+.. +  ++.+|+|.....    ......+.+|+.+++.++|++|+.+    ..++..++
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~l   77 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRA-T--GKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCL   77 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECC-C--CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEE
Confidence            47889999999999999999987 5  778899973211    1223457889999999999999987    56778999


Q ss_pred             EEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +|||+++++|.+++.......+     ..+..|++.||.|||++||+||||||+||+++.++                  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  157 (285)
T cd05632          78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES  157 (285)
T ss_pred             EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence            9999999999988854322222     33334999999999999999999999999998655                  


Q ss_pred             ----------Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ----------YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ----------~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                .+|         ..+|+||+||++++|++|..||...........+.........               
T Consensus       158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~---------------  222 (285)
T cd05632         158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE---------------  222 (285)
T ss_pred             ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc---------------
Confidence                      011         1257999999999999999999876544333322221111000               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                ...+.+++++.+|+.+||..||++|||     +.++++|+||.+++
T Consensus       223 ----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         223 ----------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             ----------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence                      012457889999999999999999999     88999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-37  Score=255.09  Aligned_cols=239  Identities=24%  Similarity=0.364  Sum_probs=178.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----c------C
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----E------N   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~------~   68 (246)
                      ++|.+.+.||+|+||.||+|.+.. +  +..||+|....   .......+.+|+.+++.++|+||+++    .      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKR-T--GEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCC-C--CcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence            579999999999999999999876 5  77889987321   22234567899999999999999987    1      1


Q ss_pred             CceEEEEEeccCcccHHHHHhh-hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKN-FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ....+++++|+. .+|.++... ........++.|++.||.|||++|++||||||+||+++.++                
T Consensus        92 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~  170 (342)
T cd07879          92 FQDFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE  170 (342)
T ss_pred             CceEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence            235799999998 688776542 22333444555999999999999999999999999998765                


Q ss_pred             ----------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--cc
Q 036362          132 ----------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--PF  189 (246)
Q Consensus       132 ----------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  189 (246)
                                .          ....+|+||+||++++|++|+.||.+.+.......+....+.+.+..........  .+
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (342)
T cd07879         171 MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSY  250 (342)
T ss_pred             CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHH
Confidence                      0          1113569999999999999999999887777777777776666554433322211  11


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ....+...........+..++.+.+|+++||+.||.+|||+++++.||||+.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         251 IKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            1111222223333444568899999999999999999999999999999998754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=3.5e-37  Score=243.40  Aligned_cols=212  Identities=14%  Similarity=0.149  Sum_probs=164.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||.|+||.||+|.... +  +..+++|....  .......+.+|+.+++.++|+||+++    ..++..+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv   77 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLP-N--NEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV   77 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcC-C--CcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence            589999999999999999999876 5  77888888322  12245678899999999999999998    567899999


Q ss_pred             EeccCcccHHHHHhhhcc-cc-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD-II-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~-~~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +|++++++|.+++..... ..     ......|++.||.|||++|++||||||+||+++.++                  
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            999999999999975322 22     223344999999999999999999999999998655                  


Q ss_pred             -------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 -------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 -------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                               .....+|+||+||++++|++|..||...+...........   ..+...      
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~------  228 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPSLE------  228 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCCcC------
Confidence                                     0111267999999999999999999766554333332221   100000      


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                    .......+++++.+++.+||..||+.|||+.++++||||
T Consensus       229 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         229 --------------TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             --------------CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence                          000024678999999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=2.7e-37  Score=246.58  Aligned_cols=235  Identities=24%  Similarity=0.364  Sum_probs=171.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.++||+|+||.||+|.+.. +  ++.+|+|...   ........+.+|+.+++.++||||+++    ..++..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   77 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKE-T--GQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYL   77 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECC-C--CCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEE
Confidence            579999999999999999999976 5  7788898722   222234567899999999999999998    56788999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |+||+++++|..+.....   ......+..|++.||.|||++|++||||+|+||+++.++                    
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          78 VFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             EEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence            999999888887765421   222233344999999999999999999999999998665                    


Q ss_pred             ---------Ce----------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc-c
Q 036362          132 ---------YT----------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI-Y  191 (246)
Q Consensus       132 ---------~~----------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  191 (246)
                               .+          ...+|+||+|+++++|++|.+||......+....+....+................. .
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM  237 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence                     00          123679999999999999999998777666666655554443221110000000000 0


Q ss_pred             ccCC-CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEE-SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~-~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ..+. ..........+.++..+.+|+.+||..||.+|||+.++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            0000 11112223346789999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.6e-37  Score=247.53  Aligned_cols=213  Identities=20%  Similarity=0.229  Sum_probs=164.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      -|++.+.||+|+||.||++.+.. +  +..+++|... ........+.+|+.+++.++|+||+++    ...+..++|+|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e   82 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKE-T--GVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   82 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECC-C--CeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence            36899999999999999999977 5  6677787732 222334567889999999999999998    55678999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+++++|..++.+..    ......+..|++.||.|||++|++||||||+||+++.++                      
T Consensus        83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (282)
T cd06643          83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS  162 (282)
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence            999999988875422    222233444999999999999999999999999998655                      


Q ss_pred             -------Cee--------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 -------YTV--------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 -------~~~--------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                             .+|              ..+|+||+||++++|++|.+||...+.......+...  .+..             
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~-------------  227 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPT-------------  227 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhc--CCCC-------------
Confidence                   011              1478999999999999999999876554433333221  0000             


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                 ...+..++.++.+|+.+||..||..|||+.++++||||+....
T Consensus       228 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         228 -----------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             -----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence                       0011356789999999999999999999999999999987543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.9e-37  Score=253.30  Aligned_cols=207  Identities=14%  Similarity=0.188  Sum_probs=153.7

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+...  ...+..||+|.....  ......+.+|+.++..+ +||||+++     .....
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP   86 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence            5899999999999999999975320  112567999983322  22345688999999999 89999998     23456


Q ss_pred             EEEEEeccCcccHHHHHhhhccc---------------------------------------------------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDI---------------------------------------------------------   94 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~---------------------------------------------------------   94 (246)
                      ++++|||+++|+|.+++......                                                         
T Consensus        87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (338)
T cd05102          87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL  166 (338)
T ss_pred             eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence            89999999999999998653210                                                         


Q ss_pred             ---cc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------------Ce--
Q 036362           95 ---IN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------------YT--  133 (246)
Q Consensus        95 ---~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------------~~--  133 (246)
                         .+     ..+..||+.||.|||++||+||||||+|||++.++                               .+  
T Consensus       167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         167 WKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence               01     12344999999999999999999999999998655                               01  


Q ss_pred             -------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhC
Q 036362          134 -------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILL  205 (246)
Q Consensus       134 -------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (246)
                             ...+|+|||||++++|++ |..||.+............. +..                          ...+
T Consensus       247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~--------------------------~~~~  299 (338)
T cd05102         247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTR--------------------------MRAP  299 (338)
T ss_pred             HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCC--------------------------CCCC
Confidence                   123579999999999997 99999875543332222211 000                          0012


Q ss_pred             CCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          206 PDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       206 ~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ...++++.+++.+||..||..|||+.|+++
T Consensus       300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         300 ENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            456889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.2e-37  Score=251.83  Aligned_cols=206  Identities=17%  Similarity=0.233  Sum_probs=153.7

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.+|+|+..    ........+.+|+.++..+ +||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   77 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKK-T--ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY   77 (329)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeC
Confidence            479999999999999987 5  7788888822    1222344577888888776 79999988    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee---------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV---------------------  134 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~---------------------  134 (246)
                      +++++|..++....   +.....+..|++.||.|||++||+||||||+||+++.++ ..                     
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~-~~kL~DfG~~~~~~~~~~~~~~~  156 (329)
T cd05618          78 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSTF  156 (329)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC-CEEEeeCCccccccCCCCccccc
Confidence            99999998876532   222233444999999999999999999999999998765 11                     


Q ss_pred             ------------------eEEEeehhhHHHHHHhhCCCCCCCCcch-----HHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          135 ------------------KIARLISVGCIFAEMVIQEPLSEDASES-----RERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       135 ------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                        ..+|+||+||++++|++|..||......     .....+.+..-.                 
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-----------------  219 (329)
T cd05618         157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-----------------  219 (329)
T ss_pred             cCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-----------------
Confidence                              2366999999999999999999531110     000001110000                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC------HHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT------VNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s------~~e~l~h~~~~~~  242 (246)
                              .....+...+..+.+|+++||..||++|||      +.++++||||+++
T Consensus       220 --------~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         220 --------KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence                    000123567899999999999999999998      4799999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.9e-37  Score=247.07  Aligned_cols=208  Identities=21%  Similarity=0.251  Sum_probs=161.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----------cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----------ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----------~~~~   70 (246)
                      +.|++.+.||+|+||.||+|.+.. .  ++.+++|...........+..|+.++..+ +|+||+++          ....
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVK-T--GQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcC-C--CcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            478999999999999999999977 5  77899998444444556788899999998 69999997          1246


Q ss_pred             eEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      ..+++|||+++++|.+++.......+.+     +..|++.||.|||++|++||||||+||+++.++              
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~  172 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  172 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence            8899999999999999987643222322     334999999999999999999999999998665              


Q ss_pred             ---------------Ceee--------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          132 ---------------YTVK--------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       132 ---------------~~~~--------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                     .+|+              .+|+||+||++++|++|..||...........+..   .+.      
T Consensus       173 ~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~---~~~------  243 (282)
T cd06636         173 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPP------  243 (282)
T ss_pred             ccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh---CCC------
Confidence                           0111              37899999999999999999975543222211111   000      


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                        .......+++++.+|+.+||..||.+|||+.|+++||||
T Consensus       244 ------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         244 ------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence                              000013578899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=6.5e-37  Score=246.26  Aligned_cols=235  Identities=25%  Similarity=0.383  Sum_probs=179.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cC-----
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----EN-----   68 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~-----   68 (246)
                      +++|++.+.||+|+||.||+|.... +  ++.|++|...   ........+.+|+.+++.++||||+++    ..     
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKD-T--GELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECC-C--CcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence            3689999999999999999999977 5  6788888832   223334567789999999999999997    11     


Q ss_pred             -----CceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------
Q 036362           69 -----DKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------  131 (246)
Q Consensus        69 -----~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------  131 (246)
                           .+..++++||++ +++.+.+....    ......+..|++.||.|||++||+||||||+||+++.++        
T Consensus        83 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg  161 (302)
T cd07864          83 DFKKDKGAFYLVFEYMD-HDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG  161 (302)
T ss_pred             hccccCCcEEEEEcccC-ccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence                 237999999999 57777776431    222333444999999999999999999999999998654        


Q ss_pred             ----------------------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          132 ----------------------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       132 ----------------------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                            .          ....+|+||+||++++|++|++||...........+.+..+.+.+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (302)
T cd07864         162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAV  241 (302)
T ss_pred             ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence                                  0          01125799999999999999999998888888888888888888777


Q ss_pred             CCCCCCccccccccCCC-CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          180 LPGVTTFFPFIYCYEES-EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ++.....+.+....... ...........+++.+.+++.+||..||.+|||+.++++||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         242 WPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             cccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            76554443321111100 1112222344678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.5e-38  Score=249.90  Aligned_cols=214  Identities=18%  Similarity=0.222  Sum_probs=164.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++++.||+|+||.||++.+.. +  +..+|+|....  .......+.+|+.+++.++|+||+++    ...+..++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRP-T--GVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC   77 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcC-C--CcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence            579999999999999999999976 5  77888886322  22224578899999999999999998    457899999


Q ss_pred             EeccCcccHHHHHhhhc------ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCC-----------------
Q 036362           76 FEYTGLLNLRKVIKNFL------DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~------~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      |||+++++|.+++....      ......+..|++.||.|||+ +|++||||||+||+++.++                 
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  157 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL  157 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence            99999999998886531      11223334499999999997 5999999999999998755                 


Q ss_pred             ----------Ce---------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 ----------YT---------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 ----------~~---------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                .+               ...+|+||+||++++|++|..||...........+......+.+         
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------  228 (286)
T cd06622         158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP---------  228 (286)
T ss_pred             cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC---------
Confidence                      01               22468999999999999999999765433322222221111110         


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                      ..++.+++++.+|+.+||..+|.+||++.++++||||....
T Consensus       229 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         229 ----------------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             ----------------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence                            11245789999999999999999999999999999997753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.3e-37  Score=241.50  Aligned_cols=206  Identities=20%  Similarity=0.295  Sum_probs=162.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|+||.||+|.... +  +..+++|....   .......+.+|+.+++.++||||+++    ..++..++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKA-D--QKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIV   77 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcC-C--CcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEE
Confidence            69999999999999999999877 5  77888887221   22345678899999999999999987    456789999


Q ss_pred             EeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe-----------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT-----------------  133 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~-----------------  133 (246)
                      |||+++++|.+++.......+..     +..|++.||.|||++|++||||||+||+++.++..                 
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK  157 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence            99999999999997643222322     33499999999999999999999999999855411                 


Q ss_pred             ---------------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          134 ---------------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       134 ---------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                           ...+|+||+|+++++|++|..||...+.......+...  ..                 
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~-----------------  218 (256)
T cd08220         158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG--TF-----------------  218 (256)
T ss_pred             ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc--CC-----------------
Confidence                                 12367999999999999999999776544433333221  00                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                               ......+++++.+++.+||..||.+|||+.|+++||||
T Consensus       219 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         219 ---------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             ---------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence                     00123578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.1e-37  Score=246.55  Aligned_cols=216  Identities=15%  Similarity=0.230  Sum_probs=162.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..+|+|....  .......+.+|+.++++++||||+++    ...+..++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   77 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLL-T--RRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISIC   77 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcC-C--CcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEE
Confidence            579999999999999999999877 5  77899998322  12234568899999999999999998    556789999


Q ss_pred             EeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      |||+++++|..+. ...+........|++.||.|||++||+|+||||+||+++.++                        
T Consensus        78 ~e~~~~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  156 (279)
T cd06619          78 TEFMDGGSLDVYR-KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT  156 (279)
T ss_pred             EecCCCCChHHhh-cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCC
Confidence            9999999986553 223334445556999999999999999999999999998766                        


Q ss_pred             ---Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHH---HHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ---YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRE---RISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ---~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                         .+|         ..+|+||+||++++|++|..||........   ..........+....                 
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  219 (279)
T cd06619         157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV-----------------  219 (279)
T ss_pred             hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-----------------
Confidence               112         235799999999999999999865322110   001111111100000                 


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                            ......++++.+|+.+||..||+.||+++|+++||||...+.
T Consensus       220 ------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         220 ------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             ------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence                  001346789999999999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2.2e-37  Score=251.29  Aligned_cols=209  Identities=17%  Similarity=0.197  Sum_probs=163.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCC-CCceEEe----cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~   73 (246)
                      +|+..+.||+|+||.||+|.+.. +  +..||+|+..    ........+..|..++..+. |++|+++    ...+..|
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~   77 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKG-T--DELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLY   77 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEE
Confidence            58899999999999999999887 5  7789999822    12233456778888888886 5666665    5667899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +||||+++++|.+++....   +.....++.|++.||.|||++||+||||||+|||++.++                   
T Consensus        78 lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          78 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence            9999999999999986532   233333445999999999999999999999999998765                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||+||++++|++|..||.+.........+....  .                 
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~-----------------  218 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--V-----------------  218 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--C-----------------
Confidence                               01123569999999999999999998776655444444310  0                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                ..+..+++++.+++.+||..||.+|++     ..++++||||+.+.
T Consensus       219 ----------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         219 ----------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID  264 (323)
T ss_pred             ----------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence                      012457889999999999999999997     57899999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.6e-37  Score=257.73  Aligned_cols=228  Identities=13%  Similarity=0.131  Sum_probs=160.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      .|.+.+.||+|+||.||+|.+.. .  ++.|++|.     .......+|+++++.++|+||+++    ...+..+++|++
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~-~--~~~vavK~-----~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPD-Y--PQRVVVKA-----GWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECC-C--CCEEEEec-----ccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            69999999999999999999987 5  77889996     223456789999999999999998    456789999999


Q ss_pred             cCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------------
Q 036362           79 TGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------------  135 (246)
Q Consensus        79 ~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------------  135 (246)
                      +. ++|.+++....    ......+..|++.||.|||++||+||||||+|||++.++ ..+                   
T Consensus       242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~-~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE-DICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC-CEEEcccCCceecccccccccc
Confidence            97 78988886432    222233445999999999999999999999999998655 112                   


Q ss_pred             ----------------------EEEeehhhHHHHHHhhCCCC-CCCCc------chHHHHHHHHhhCCCCcCcCCCCC--
Q 036362          136 ----------------------IARLISVGCIFAEMVIQEPL-SEDAS------ESRERISIFRLMGEPSEETLPGVT--  184 (246)
Q Consensus       136 ----------------------~~Di~slG~i~~~l~~g~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--  184 (246)
                                            .+|+|||||+++||++|..+ |....      ...++..+.+..+...........  
T Consensus       320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  399 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR  399 (461)
T ss_pred             cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence                                  24699999999999997654 33221      123444444443332222111000  


Q ss_pred             Cccccc-----cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          185 TFFPFI-----YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       185 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ....+.     ...+......+.. ...++.++.+||++||+.||.+|||+.|+|+||||++
T Consensus       400 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        400 LVSQYRHRAARNRRPAYTRPAWTR-YYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHhhhhcccCCccCCcchhh-hccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            000000     0011111111111 1246789999999999999999999999999999975

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.1e-37  Score=244.52  Aligned_cols=208  Identities=22%  Similarity=0.246  Sum_probs=161.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----c------CCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----E------NDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~------~~~   70 (246)
                      +.|++.+.||+|+||.||+|.... +  +..+|+|...........+.+|+.++..+ +|+||+++    .      ...
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~-~--~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVK-T--GQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcC-C--CcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            468999999999999999999877 5  77889998544455566889999999998 69999997    1      135


Q ss_pred             eEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      ..+++|||+++++|.+++.......+.+     ++.|++.||.|||++||+||||||+||+++.++              
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence            7899999999999999987643333333     344999999999999999999999999998665              


Q ss_pred             ---------------Ceee--------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          132 ---------------YTVK--------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       132 ---------------~~~~--------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                     .+|+              .+|+||+||++++|++|..||..............   .+.      
T Consensus       163 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~---~~~------  233 (272)
T cd06637         163 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPA------  233 (272)
T ss_pred             cccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---CCC------
Confidence                           0111              37899999999999999999975443322221111   000      


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                        .......++.++.+|+.+||..||.+|||+.+++.||||
T Consensus       234 ------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         234 ------------------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             ------------------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence                              000113567899999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-37  Score=250.57  Aligned_cols=199  Identities=16%  Similarity=0.178  Sum_probs=168.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      .+++++.||+|-||.||.|.+..    ...||+|......-....+.+|+.+|++|+|++||++    ..++.+||||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~----~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~  282 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNG----STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY  282 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcC----CCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence            35688999999999999999987    4478888855556667889999999999999999999    444579999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      ++.|+|.++++......+     -.+..||++|.+||+++++|||||-..||||+.+. ..|++|               
T Consensus       283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~-~vKIsDFGLAr~~~d~~Y~~~  361 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL-VVKISDFGLARLIGDDEYTAS  361 (468)
T ss_pred             cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc-eEEEcccccccccCCCceeec
Confidence            999999999987332222     23344999999999999999999999999999666 556655               


Q ss_pred             -------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 -------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               +||||++++|+++ |+.|+.+.+..+.+..+.+....|.|               
T Consensus       362 ~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P---------------  426 (468)
T KOG0197|consen  362 EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP---------------  426 (468)
T ss_pred             CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC---------------
Confidence                                     9999999999998 99999999998888888885544443               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                   ..+|+++-+++..||..+|++|||.+.+.
T Consensus       427 -------------~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  427 -------------EGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             -------------CCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence                         67999999999999999999999998765

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=5.4e-38  Score=255.47  Aligned_cols=232  Identities=16%  Similarity=0.170  Sum_probs=161.2

Q ss_pred             ceeeeCCc--cceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            6 KVELIGRG--KYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         6 i~~~lg~G--~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +...||+|  +||+||++++.. +  +..||+|......   ...+.+.+|+.+++.++||||+++    ..++..++++
T Consensus         2 ~~~~ig~g~~~~~~v~~a~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~   78 (328)
T cd08226           2 LQVEIGRGFCNLTSVYLARHTP-T--GTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             hHHHhCCcccCceeEEEEEEcC-C--CcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEE
Confidence            34567777  899999999876 5  8899999833221   223577889999999999999998    5677899999


Q ss_pred             eccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ||+.+++|.+++.+.....+.+     +..|++.||+|||++|++||||||+||+++.++                    
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~  158 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA  158 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence            9999999999987653333333     344999999999999999999999999998653                    


Q ss_pred             ----------------C-----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ----------------Y-----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ----------------~-----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                      .           ....+|+||+||++++|++|..||..............  +.+...+.....
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~  236 (328)
T cd08226         159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLK--GPPYSPLDITTF  236 (328)
T ss_pred             cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhc--CCCCCCcccccc
Confidence                            0           11346899999999999999999987655433322222  111111000000


Q ss_pred             --Cccccccc---c---------------CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 --TFFPFIYC---Y---------------EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 --~~~~~~~~---~---------------~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                        ....+...   .               ...............++.+.+|+++||+.||.+|||+.|+++||||+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence              00000000   0               0000000001123467889999999999999999999999999999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.2e-37  Score=254.89  Aligned_cols=238  Identities=26%  Similarity=0.368  Sum_probs=180.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCC-----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----END-----   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~-----   69 (246)
                      ++|++.+.||+|++|.||+|++.. +  +..|++|....   .......+.+|+.+++.++|+||+++    ...     
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTK-T--GRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECC-C--CcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            579999999999999999999987 5  77889998322   22234567789999999999999887    222     


Q ss_pred             -ceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           70 -KLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        70 -~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                       ...++|++|++ ++|.+++...  ..........|++.||.|||++||+||||||+||+++.++               
T Consensus        92 ~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~  170 (343)
T cd07851          92 FQDVYLVTHLMG-ADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD  170 (343)
T ss_pred             cccEEEEEecCC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence             34899999997 8999988652  1222333444999999999999999999999999998655               


Q ss_pred             ---------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc--cc
Q 036362          132 ---------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF--FP  188 (246)
Q Consensus       132 ---------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  188 (246)
                                           .....+|+||+|++++++++|+.||...........+....+.+.+..+......  ..
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07851         171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARN  250 (343)
T ss_pred             cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHH
Confidence                                 0112367999999999999999999988777777777777776665544333211  11


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +...........+.......++++.+|+++||..||.+|||+.++++||||++..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~  305 (343)
T cd07851         251 YIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH  305 (343)
T ss_pred             HHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccC
Confidence            1112222222333344456799999999999999999999999999999998764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.6e-37  Score=249.29  Aligned_cols=213  Identities=22%  Similarity=0.279  Sum_probs=164.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||++.+.. +  +..|++|.. .........+.+|+.+++.++|+||+++    ..++..++||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIA-T--GQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECC-C--CCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            579999999999999999999876 5  778899983 2233345678889999999999999998    5677899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee--------------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV--------------------  134 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~--------------------  134 (246)
                      ||+++++|.+++.+..  ......+..|++.||.|||++|++||||||+||+++.++ ..                    
T Consensus        96 e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~-~~~l~Dfg~~~~~~~~~~~~~~  174 (297)
T cd06656          96 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRST  174 (297)
T ss_pred             cccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEECcCccceEccCCccCcCc
Confidence            9999999999986532  222333444999999999999999999999999998665 11                    


Q ss_pred             -------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          135 -------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       135 -------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                         ..+|+||+||+++++++|..||...+.......+.. .+.+.                   
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~-------------------  234 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE-------------------  234 (297)
T ss_pred             ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCC-------------------
Confidence                               225699999999999999999976543222111110 00000                   


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                            ...+...++.+.+|+.+||..||.+|||+.++++||||+....
T Consensus       235 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         235 ------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             ------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence                  0012356788999999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=245.80  Aligned_cols=232  Identities=32%  Similarity=0.568  Sum_probs=181.2

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      |++.+.||+|++|.||+|.+.. +  ++.+++|....   .......+.+|+.+++.++|++|+++    ..+...++++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   77 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKL-T--GEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVF   77 (283)
T ss_pred             CccceeeecCCCceEEEEEcCC-C--CcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEE
Confidence            7888999999999999999876 5  77888887222   22335678889999999999999998    5678899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      ||++ ++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++                     
T Consensus        78 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~  156 (283)
T cd05118          78 EFMD-TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYT  156 (283)
T ss_pred             eccC-CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccccc
Confidence            9999 69988886632    112223344999999999999999999999999999654                     


Q ss_pred             ------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-cccccc
Q 036362          132 ------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-FPFIYC  192 (246)
Q Consensus       132 ------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  192 (246)
                                        .....+|+||+|+++++|++|..||...+..++...+.+..+.+.+..+...... ......
T Consensus       157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS  236 (283)
T ss_pred             CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence                              0112356999999999999999999988888888888888888877766654432 111122


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ++...........+.++.++.+|+.+||..||.+||++.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            22223333344456789999999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-37  Score=249.37  Aligned_cols=211  Identities=18%  Similarity=0.277  Sum_probs=166.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|++|.||+|.... +  ++.+++|......    .....+.+|+.+++.++|+||+++    ...+..+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   77 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKG-T--GKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLC   77 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcC-C--CcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEE
Confidence            579999999999999999999977 5  7789999832221    234568889999999999999988    5677899


Q ss_pred             EEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC----------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY----------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~----------------  132 (246)
                      ++|||+.+++|.+++.......+.+     +..|++.||.|||+.|++||||||+||+++.++.                
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          78 LVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence            9999999999999987543223332     3349999999999999999999999999986540                


Q ss_pred             ---------------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcc
Q 036362          133 ---------------------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASE  161 (246)
Q Consensus       133 ---------------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~  161 (246)
                                                                         ....+|+||+|+++++|++|..||...+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence                                                               01136899999999999999999987765


Q ss_pred             hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC----HHHHhcCC
Q 036362          162 SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT----VNDALNHH  237 (246)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s----~~e~l~h~  237 (246)
                      ...+..+...   +..               .+         .....++++.+++.+||..||++|||    ++|+++||
T Consensus       238 ~~~~~~~~~~---~~~---------------~~---------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~  290 (316)
T cd05574         238 DETFSNILKK---EVT---------------FP---------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP  290 (316)
T ss_pred             HHHHHHHhcC---Ccc---------------CC---------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence            5444333321   000               00         00236899999999999999999999    99999999


Q ss_pred             CCcCC
Q 036362          238 YYRDV  242 (246)
Q Consensus       238 ~~~~~  242 (246)
                      ||+++
T Consensus       291 ~~~~~  295 (316)
T cd05574         291 FFRGV  295 (316)
T ss_pred             hhhcC
Confidence            99986

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4.6e-37  Score=245.90  Aligned_cols=210  Identities=20%  Similarity=0.276  Sum_probs=166.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|++|.||++.+.. .  ++.+++|....    .......+.+|+++++.++||||+++    ..++..+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKG-S--GKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLY   77 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEE
Confidence            579999999999999999999987 5  77889987221    22345678899999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      ++|||+++++|.+++....   ......+..|++.||.|||++|++||||+|+||+++.++.                  
T Consensus        78 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  157 (290)
T cd05580          78 LVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYT  157 (290)
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCC
Confidence            9999999899999987642   1122223449999999999999999999999999987650                  


Q ss_pred             -----------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          133 -----------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       133 -----------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                       ....+|+||+|+++++|++|..||...........+..  +.+                    
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~--------------------  215 (290)
T cd05580         158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--GKV--------------------  215 (290)
T ss_pred             CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCc--------------------
Confidence                             11236799999999999999999987664333333321  110                    


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                             ..+...++.+++++++||..||.+|+     +++|+++||||+.+.
T Consensus       216 -------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         216 -------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             -------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence                   01135688999999999999999999     999999999999875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=9.9e-37  Score=239.59  Aligned_cols=206  Identities=19%  Similarity=0.272  Sum_probs=163.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|+||.||.+.... .  ++.+++|...   ........+.+|+.+++.++|+||+++    ...++.++|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKE-D--GKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIV   77 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcC-C--CCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEE
Confidence            69999999999999999999877 5  7788888722   123344578899999999999999998    567899999


Q ss_pred             EeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +||+.+++|.+++.......+     ..+..|++.||.|||++|++|+||+|+||+++.++                   
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence            999999999998865332222     23344999999999999999999999999998655                   


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||+||++++|++|..||...........+..  +...                
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~----------------  219 (256)
T cd08218         158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYP----------------  219 (256)
T ss_pred             hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCC----------------
Confidence                               001236799999999999999999976554444333322  1100                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                ......+.++.+++.+||..+|..||++.++++||||
T Consensus       220 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         220 ----------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             ----------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence                      0124578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=3.4e-37  Score=246.73  Aligned_cols=210  Identities=17%  Similarity=0.194  Sum_probs=161.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----c-----CCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----E-----NDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~-----~~~~   71 (246)
                      ++|++.+.||+|+||.||++.... +  ++.+++|...........+.+|+.+++++ +|||++++    .     ..+.
T Consensus        22 ~~y~~~~~l~~g~~~~vy~~~~~~-~--~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~   98 (291)
T cd06639          22 DTWEIIETIGKGTYGKVYKVTNKK-D--GSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ   98 (291)
T ss_pred             CCeEEEEEeecCCCeEEEEEEECC-C--CCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence            579999999999999999999877 5  77889998444344456778899999998 79999997    1     1356


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------  131 (246)
                      .++|+||+++++|.+++....  ...+.     .+..|++.||.|||++|++||||||+||+++.++             
T Consensus        99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~  178 (291)
T cd06639          99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL  178 (291)
T ss_pred             eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence            899999999999999885421  11222     2334999999999999999999999999998665             


Q ss_pred             ----------------Ce--------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          132 ----------------YT--------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       132 ----------------~~--------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                      .+              ...+|+||+||++++|++|+.||...........+..  +.+..    
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~--~~~~~----  252 (291)
T cd06639         179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR--NPPPT----  252 (291)
T ss_pred             ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc--CCCCC----
Confidence                            11              2347899999999999999999976554333322221  11000    


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                          .......+..+.+|+.+||..||+.|||+.|+++||||+
T Consensus       253 --------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         253 --------------------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             --------------------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence                                000134567899999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.9e-37  Score=273.96  Aligned_cols=212  Identities=18%  Similarity=0.303  Sum_probs=162.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe------cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK------ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~   71 (246)
                      +++|++++.||+|+||.||+|.+.. +  +..+++|...   ........+..|+.+++.++||||+++      .....
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~-t--g~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKR-T--QEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC-C--CeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            4789999999999999999999987 5  7778888722   223335678899999999999999997      23467


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHhhC-------ceeeccCCCCCeEEecCC------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYHSN-------RCLHGRLNPYQALINLSD------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH~~-------~i~H~Dikp~Nil~~~~~------  131 (246)
                      +|+||||+++++|.+++....  ...++     .++.||+.||.|||+.       +|+||||||+|||++...      
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            999999999999999986532  11232     3344999999999984       599999999999996310      


Q ss_pred             ---------------------------------------Ce-----------eeEEEeehhhHHHHHHhhCCCCCCCCcc
Q 036362          132 ---------------------------------------YT-----------VKIARLISVGCIFAEMVIQEPLSEDASE  161 (246)
Q Consensus       132 ---------------------------------------~~-----------~~~~Di~slG~i~~~l~~g~~~~~~~~~  161 (246)
                                                             .+           ...+|+|||||++++|++|..||.....
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~  248 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN  248 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                                                   01           1235799999999999999999986655


Q ss_pred             hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          162 SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ...+......  .|..                          .....+.++.+||..||..+|.+|||+.|+|.|||+++
T Consensus       249 ~~qli~~lk~--~p~l--------------------------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        249 FSQLISELKR--GPDL--------------------------PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             HHHHHHHHhc--CCCC--------------------------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence            4433322221  1100                          01346789999999999999999999999999999986


Q ss_pred             CC
Q 036362          242 VV  243 (246)
Q Consensus       242 ~~  243 (246)
                      +.
T Consensus       301 i~  302 (1021)
T PTZ00266        301 VG  302 (1021)
T ss_pred             cC
Confidence            63

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-37  Score=246.25  Aligned_cols=212  Identities=22%  Similarity=0.256  Sum_probs=165.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||.|++|.||+|++.. +  +..+++|....  .......+.+|+.+++.++|+||+++    ......+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKR-T--NQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWII   77 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECC-C--CeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEE
Confidence            589999999999999999999877 5  77889998322  22334568899999999999999998    456889999


Q ss_pred             EeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           76 FEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      +||+++++|.+++...  ..........|++.||.|||+++++||||+|+||+++.++                      
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          78 MEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             EEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence            9999999999998764  2223333444999999999999999999999999999765                      


Q ss_pred             ----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          132 ----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       132 ----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                      .....+|+||+|+++++|++|..||...........+...  .++                   
T Consensus       158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~-------------------  216 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN--NPP-------------------  216 (274)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc--CCC-------------------
Confidence                            0112367999999999999999999765533322222211  000                   


Q ss_pred             CCcchhhhhCC-CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          196 SEPKDLAILLP-DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       196 ~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                             .... .+++++.+++.+||..||++|||++++++||||++...
T Consensus       217 -------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~  259 (274)
T cd06609         217 -------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK  259 (274)
T ss_pred             -------CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence                   0001 26889999999999999999999999999999988643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1.1e-36  Score=248.40  Aligned_cols=237  Identities=26%  Similarity=0.431  Sum_probs=181.6

Q ss_pred             CCccc-eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC---------------cchhhhhhcccccCCCCceEE
Q 036362            2 EKYRK-VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV---------------PISILTKISPLKEMDYPLIFR   65 (246)
Q Consensus         2 ~~y~i-~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~---------------~~~~~~E~~~l~~l~~~~i~~   65 (246)
                      ++|.. .+.||+|+||.||+|.+.. .  ++.||+|........               ...+.+|+.+++.++|+||++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTL-T--GKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG   84 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECC-C--CCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence            47764 4679999999999999876 5  778888873221111               124778999999999999998


Q ss_pred             e----cCCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------
Q 036362           66 K----ENDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------  131 (246)
Q Consensus        66 ~----~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------  131 (246)
                      +    ...+..+++|||++ ++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++       
T Consensus        85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df  163 (335)
T PTZ00024         85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF  163 (335)
T ss_pred             eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence            8    56678999999998 79999886532   222333444999999999999999999999999998654       


Q ss_pred             ------C----------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHH
Q 036362          132 ------Y----------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRER  165 (246)
Q Consensus       132 ------~----------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~  165 (246)
                            .                                        ....+|+||+||++++|++|.+||...+..+..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~  243 (335)
T PTZ00024        164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL  243 (335)
T ss_pred             cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                  0                                        011257999999999999999999988888888


Q ss_pred             HHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          166 ISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ..+....+.|....|+.....+.+.. .............+..++++.+++.+||..||++|||++|++.||||+..+
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        244 GRIFELLGTPNEDNWPQAKKLPLYTE-FTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             HHHHHHhCCCchhhCcchhhcccccc-cCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            88888888887776655433322211 111122233334456789999999999999999999999999999999754

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-37  Score=240.69  Aligned_cols=208  Identities=21%  Similarity=0.334  Sum_probs=162.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC------CCCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP------DGVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      +.|++.+.||+|++|.||.|.... +  +..+++|.....      ......+.+|+.+++.++||||+++    ...+.
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~-~--~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   78 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVD-T--GRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDET   78 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcC-C--CcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCe
Confidence            579999999999999999999876 5  778888872211      1123467889999999999999998    56679


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      .++++||+++++|.+++....   ......++.|++.||.|||+.|++||||+|+||+++.++                 
T Consensus        79 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~  158 (263)
T cd06625          79 LSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  158 (263)
T ss_pred             EEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence            999999999999999987542   222233445999999999999999999999999998755                 


Q ss_pred             ---------------Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 ---------------YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 ---------------~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                     .+|         ..+|+||+|++++++++|+.||...............   +.           
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-----------  224 (263)
T cd06625         159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ---PT-----------  224 (263)
T ss_pred             cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc---CC-----------
Confidence                           011         2357999999999999999999765444333222211   00           


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                   ....+...++++.+++++||..+|.+|||+.++++||||
T Consensus       225 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         225 -------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             -------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence                         001124678899999999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-37  Score=265.40  Aligned_cols=238  Identities=15%  Similarity=0.207  Sum_probs=159.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhh------------------hhccccCCCCCcchhhhhhcccccCCCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTV------------------LLKADIIPDGVPISILTKISPLKEMDYPLI   63 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~v------------------aiK~~~~~~~~~~~~~~E~~~l~~l~~~~i   63 (246)
                      ++|+++++||+|+||+||+|......  +...                  +.|...........+.+|+.+++.++|+||
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRAST--EEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccc--hhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            57999999999999999998764322  1111                  122212222334567899999999999999


Q ss_pred             EEe----cCCceEEEEEeccCcccHHHHHhhhccc--------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           64 FRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI--------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        64 ~~~----~~~~~~~lv~e~~~~~~L~~~~~~~~~~--------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      +++    ...+..|++++++. ++|.+++......        ....++.||+.||.|||++||+||||||+|||++.++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            998    56678899999998 7888777432210        1223455999999999999999999999999998765


Q ss_pred             CeeeE----------------------------------------EEeehhhHHHHHHhhCCC-CCCCC--cchHHHHHH
Q 036362          132 YTVKI----------------------------------------ARLISVGCIFAEMVIQEP-LSEDA--SESRERISI  168 (246)
Q Consensus       132 ~~~~~----------------------------------------~Di~slG~i~~~l~~g~~-~~~~~--~~~~~~~~~  168 (246)
                       ..++                                        +|+|||||++++|++|.. |+...  ....++..+
T Consensus       305 -~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~  383 (501)
T PHA03210        305 -KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI  383 (501)
T ss_pred             -CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence             2222                                        469999999999999875 44322  233455555


Q ss_pred             HHhhCCCCcCcCCCCCCccccccccC-CCCcchhhhhC--CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          169 FRLMGEPSEETLPGVTTFFPFIYCYE-ESEPKDLAILL--PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...++.+..+..........++.... ...........  ..++.++.+++.+||..||.+|||+.|+|+||||+...
T Consensus       384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence            55544433222111111111110000 00001111111  24678899999999999999999999999999998754

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2e-37  Score=251.83  Aligned_cols=203  Identities=16%  Similarity=0.251  Sum_probs=156.0

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhc-ccccCCCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKIS-PLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~-~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||+||+|++.. +  ++.+|+|+...    .......+..|.. +++.++||||+++    ...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKL-D--GKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDF   77 (325)
T ss_pred             CceeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcC
Confidence            468999999999999877 5  77889998221    1222344555554 4677899999988    567899999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee---------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV---------------------  134 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~---------------------  134 (246)
                      +++++|..++....   +.....+..||+.||.|||++||+||||||+|||++.++ ..                     
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~-~~kL~DfG~~~~~~~~~~~~~~~  156 (325)
T cd05604          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG-HVVLTDFGLCKEGIAQSDTTTTF  156 (325)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC-CEEEeecCCcccCCCCCCCcccc
Confidence            99999998886532   222333445999999999999999999999999998765 12                     


Q ss_pred             ------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          135 ------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       135 ------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                        ..+|+||+||++++|++|..||...+.......+...   +                     
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~---~---------------------  212 (325)
T cd05604         157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK---P---------------------  212 (325)
T ss_pred             cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC---C---------------------
Confidence                              2356999999999999999999876655444433321   0                     


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH----HHHhcCCCCcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV----NDALNHHYYRDVV  243 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~----~e~l~h~~~~~~~  243 (246)
                           ....+..+..+.+++++||..||.+||++    .++++||||+.+.
T Consensus       213 -----~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~  258 (325)
T cd05604         213 -----LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS  258 (325)
T ss_pred             -----ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence                 00114578899999999999999999987    5899999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=4.3e-38  Score=247.69  Aligned_cols=210  Identities=22%  Similarity=0.343  Sum_probs=159.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcch---hhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS---ILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~---~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      |++.+.||+|+||+||++.+.. .  ++.+|+|...........   ..+|+.+++.++||||+++    ......+++|
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~-~--~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKK-N--GQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETT-T--TEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECC-C--CeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccc
Confidence            8899999999999999999988 5  778999984333332222   3458999999999999987    5578899999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      |++++++|.+++.+..   .........|++.||.+||++|++|+||||+||+++.++ ..+++|               
T Consensus        78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~-~~~l~Dfg~~~~~~~~~~~~~  156 (260)
T PF00069_consen   78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG-EVKLIDFGSSVKLSENNENFN  156 (260)
T ss_dssp             EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS-EEEESSGTTTEESTSTTSEBS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence            9999889999998432   222233344999999999999999999999999999655 334433               


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               +||+|+++++|++|..||...........+............             
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------  223 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS-------------  223 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-------------
Confidence                                     999999999999999999877433333333332211100000             


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                               ......++.+.+++.+||+.||++|||+.++++||||
T Consensus       224 ---------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  224 ---------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             ---------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             ---------cccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence                     0001223899999999999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=4.7e-37  Score=247.83  Aligned_cols=235  Identities=18%  Similarity=0.205  Sum_probs=163.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||++.+.. +  +..+++|....  .......+.+|+++++.++||||+++    ...+..+++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   77 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRP-S--GLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC   77 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcC-C--CeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence            579999999999999999999877 5  66778887322  12233568899999999999999998    567899999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |||+++++|.+++.+..   ......+..|++.||.|||+ ++++||||||+||+++.++                    
T Consensus        78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (308)
T cd06615          78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  157 (308)
T ss_pred             eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence            99999999999997642   22233444499999999997 6999999999999998664                    


Q ss_pred             ----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC-cC-CCCCCc-c-----
Q 036362          132 ----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE-TL-PGVTTF-F-----  187 (246)
Q Consensus       132 ----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~-~-----  187 (246)
                                      .....+|+||+||++++|++|..||...+... .............. .. ...... .     
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKESHRPVSGHPPDSPRP  236 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCccccccccCCcccccCCCCCccch
Confidence                            01123679999999999999999997654322 22222111000000 00 000000 0     


Q ss_pred             ----ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 ----PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                          .............  .....++.++++|+.+||..||++|||+.++++||||.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         237 MAIFELLDYIVNEPPPK--LPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             hhHHHHHHHHhcCCCcc--CcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                0000000000000  0012367889999999999999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=8.4e-37  Score=243.39  Aligned_cols=232  Identities=25%  Similarity=0.420  Sum_probs=177.0

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC--CCcchhhhhhcccccCC-CCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--GVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~lv~   76 (246)
                      |++.+.||+|++|.||+|+... +  ++.+++|......  .......+|+..++.++ |+||+++    ..++..++||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   77 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKE-T--GELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVF   77 (283)
T ss_pred             CeeheeeccCCceEEEEEEECC-C--CcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEE
Confidence            7889999999999999999976 5  6788888732221  12334567899999998 9999998    5678999999


Q ss_pred             eccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ||+ +++|.+++.......+.     ....|++.+|.|||++|++|+||+|+||+++.++                    
T Consensus        78 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  156 (283)
T cd07830          78 EYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYT  156 (283)
T ss_pred             ecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcC
Confidence            999 48999888664322222     2333999999999999999999999999999755                    


Q ss_pred             --------Cee----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-cccccc
Q 036362          132 --------YTV----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-FPFIYC  192 (246)
Q Consensus       132 --------~~~----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  192 (246)
                              .+|          ..+|+||||+++++|++|.+||...........+...++.+....+...... ......
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07830         157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR  236 (283)
T ss_pred             CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence                    112          2367999999999999999999988888888888888888776554432211 111112


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .+...........+..+..+.+|+++||..||..|||++|++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            22222223333344558899999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=7.3e-37  Score=245.38  Aligned_cols=214  Identities=21%  Similarity=0.281  Sum_probs=167.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      .+|++.+.||.|++|.||++.+.. +  ++.|++|.. .........+.+|+.+++.++|+||+++    ...+..++|+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVA-T--GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcC-C--CcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            469999999999999999999876 5  778888873 2333345678889999999999999998    5567899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      ||+++++|.+++....  ......+..|++.||.|||++|++||||||+||+++.++                       
T Consensus        96 e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (296)
T cd06655          96 EYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTM  175 (296)
T ss_pred             EecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCc
Confidence            9999999999886532  222233344999999999999999999999999998655                       


Q ss_pred             ------C---------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ------Y---------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ------~---------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                            .         ....+|+||+||++++|++|..||...+.......+... +.+.                    
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~--------------------  234 (296)
T cd06655         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE--------------------  234 (296)
T ss_pred             CCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc--------------------
Confidence                  0         112367999999999999999999876654433322221 1100                    


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                           ...+..+++.+.+|+++||..||.+|||+.+++.||||+...+
T Consensus       235 -----~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         235 -----LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             -----cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence                 0011357889999999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=7.1e-37  Score=248.74  Aligned_cols=239  Identities=24%  Similarity=0.380  Sum_probs=179.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~   73 (246)
                      ++|++.+.||.|+||.||+|.+.. +  +..+++|..   .........+.+|+.+++.++||||+++     ......+
T Consensus        10 ~~y~~~~~ig~g~~g~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856          10 NRYVDLQPVGMGAFGLVCSARDQL-T--GQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             cceEEEEeecccCCeEEEEEEECC-C--CCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            579999999999999999999887 5  778888862   2223345678899999999999999997     2356789


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +++||++ ++|.+++....  .........|++.||.|||++|++||||+|+||+++.++                    
T Consensus        87 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  165 (328)
T cd07856          87 FVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY  165 (328)
T ss_pred             EEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence            9999997 79988886432  122233445999999999999999999999999998654                    


Q ss_pred             ------Cee----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc--ccccccc
Q 036362          132 ------YTV----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF--FPFIYCY  193 (246)
Q Consensus       132 ------~~~----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  193 (246)
                            .+|          ..+|+||+||++++|++|.+||...........+.+.+|.++.+........  ..+....
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (328)
T cd07856         166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL  245 (328)
T ss_pred             cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence                  011          2256999999999999999999887776666777777777765543322111  1111111


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ............+..++++.+++++||+.+|++|||+++++.||||+....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~  296 (328)
T cd07856         246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD  296 (328)
T ss_pred             cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence            112222223334568899999999999999999999999999999977543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-38  Score=271.84  Aligned_cols=211  Identities=18%  Similarity=0.295  Sum_probs=175.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|+|+++||+|+||.|.+++.+. +  ++.||.|+    .........-|..|-.+|..-+.+-|+.+    .+.+++|
T Consensus        75 ~DfeilKvIGrGaFGEV~lVr~k~-t--~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY  151 (1317)
T KOG0612|consen   75 EDFEILKVIGRGAFGEVALVRHKS-T--EKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY  151 (1317)
T ss_pred             HhhHHHHHhcccccceeEEEEeec-c--ccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence            589999999999999999999988 6  88999998    22445566778889999999999999987    7889999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      +||+|++||||..++.++.   +.....+++.|+-||.-+|+.|+|||||||+|||+|..| ..++              
T Consensus       152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G-HikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG-HIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC-cEeeccchhHHhcCCCCc
Confidence            9999999999999998864   344555666999999999999999999999999999888 3333              


Q ss_pred             -------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 -------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 -------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                     +|.||+|+++|||+.|..||...+-.+.+.+|...-..         . 
T Consensus       231 V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~---------l-  300 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES---------L-  300 (1317)
T ss_pred             EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh---------c-
Confidence                                           55899999999999999999987766666665552100         0 


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC---HHHHhcCCCCcCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT---VNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s---~~e~l~h~~~~~~  242 (246)
                            .+|.         ...+|+++++||++++ .+|+.|..   ++|+-+||||.++
T Consensus       301 ------~FP~---------~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  301 ------SFPD---------ETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             ------CCCc---------ccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCccccCC
Confidence                  0110         0358999999999999 68899998   9999999999996

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-37  Score=248.21  Aligned_cols=235  Identities=28%  Similarity=0.441  Sum_probs=171.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCC--ceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----END--KLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~--~~~   72 (246)
                      +|++.+.||+|++|.||+|.+..+ ..+..||+|....    .......+.+|+.+++.++||||+++    ...  ...
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNG-KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCC-CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceE
Confidence            589999999999999999998662 1277899998322    23445678889999999999999988    333  789


Q ss_pred             EEEEeccCcccHHHHHhhhcc---ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEec----CC---------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----SD---------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~----~~---------  131 (246)
                      ++||||++ ++|.+++.....   ..+     ..+..|++.||.|||++|++||||||+||+++.    ++         
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~  158 (316)
T cd07842          80 YLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL  158 (316)
T ss_pred             EEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence            99999999 678777753221   122     234449999999999999999999999999987    33         


Q ss_pred             -----------------------C----------eeeEEEeehhhHHHHHHhhCCCCCCCCcch---------HHHHHHH
Q 036362          132 -----------------------Y----------TVKIARLISVGCIFAEMVIQEPLSEDASES---------RERISIF  169 (246)
Q Consensus       132 -----------------------~----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~---------~~~~~~~  169 (246)
                                             .          ..+.+|+||+||++++|++|.+||......         .....+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (316)
T cd07842         159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF  238 (316)
T ss_pred             ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence                                   0          012357999999999999999999765432         2455666


Q ss_pred             HhhCCCCcCcCCCCCCcccccc--------ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          170 RLMGEPSEETLPGVTTFFPFIY--------CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ..++.+.+..+......+.+..        .................+..+.+++.+||..||++|||+.|+++||||
T Consensus       239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            7777666655443333322211        011011111112223678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.8e-37  Score=252.82  Aligned_cols=237  Identities=26%  Similarity=0.336  Sum_probs=177.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----c------C
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----E------N   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~------~   68 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....   .......+.+|+.+++.++|+||+++    .      .
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTK-T--GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcC-C--CeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence            689999999999999999999876 5  77889997322   12224567889999999999999987    1      1


Q ss_pred             CceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------  132 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------  132 (246)
                      ....++++++++ ++|.+++...  +......+..|++.||.|||++||+||||||+||+++.++.              
T Consensus        94 ~~~~~lv~~~~~-~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877          94 FNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  172 (345)
T ss_pred             cccEEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence            245788888875 8998887642  22233334459999999999999999999999999987650              


Q ss_pred             ----------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--c
Q 036362          133 ----------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--P  188 (246)
Q Consensus       133 ----------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  188 (246)
                                            ....+|+||+||++++|++|+.||...+.......+.+..+.+.+..........  .
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (345)
T cd07877         173 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN  252 (345)
T ss_pred             cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHH
Confidence                                  0123679999999999999999998877777777777777766655544333221  1


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      +...................++++.+|+.+||..||.+|||+.++++||||++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         253 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             HHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence            111112222222333334678999999999999999999999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=8e-37  Score=241.53  Aligned_cols=206  Identities=20%  Similarity=0.317  Sum_probs=160.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-CC---------CcchhhhhhcccccCCCCceEEe----cC
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-DG---------VPISILTKISPLKEMDYPLIFRK----EN   68 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-~~---------~~~~~~~E~~~l~~l~~~~i~~~----~~   68 (246)
                      +|.+...||+|++|.||.|.+.. +  +..+++|..... ..         ....+.+|+.+++.++||||+++    ..
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNAS-S--GELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD   77 (267)
T ss_pred             CccccceeecCCCeEEEEEEecC-C--CcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Confidence            58889999999999999999876 5  677888862211 11         12467889999999999999998    56


Q ss_pred             CceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-------------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-------------  132 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-------------  132 (246)
                      .+..++++||+++++|.+++....   ......+..|++.||.|||++|++||||+|+||+++.++.             
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          78 ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            678999999999999999996642   2223344559999999999999999999999999976540             


Q ss_pred             ----------------------e---------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          133 ----------------------T---------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       133 ----------------------~---------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                            +         ...+|+||+||++++|++|..||...........+...   ..     
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~-----  229 (267)
T cd06628         158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN---AS-----  229 (267)
T ss_pred             cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc---CC-----
Confidence                                  0         12368999999999999999999875543332222220   00     


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                          ...+...+..+.+++++||+.||.+||++.++++||||
T Consensus       230 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         230 --------------------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             --------------------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence                                00124578899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.6e-37  Score=251.97  Aligned_cols=238  Identities=24%  Similarity=0.392  Sum_probs=175.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCC-----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----END-----   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~-----   69 (246)
                      ++|++.+.||+|+||.||++.+.. +  +..||+|....   .......+.+|+.+++.++|+||+++    ...     
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRR-T--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECC-C--CcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            579999999999999999999876 5  77899997321   12223467899999999999999987    111     


Q ss_pred             -ceEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------
Q 036362           70 -KLVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------  132 (246)
Q Consensus        70 -~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------  132 (246)
                       ...++||+|++ ++|.+++....  ......+..|++.||.|||++||+||||||+||+++.++.              
T Consensus        92 ~~~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880          92 FHDFYLVMPFMG-TDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS  170 (343)
T ss_pred             cceEEEEEecCC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence             35689999995 89998886422  2233334459999999999999999999999999986550              


Q ss_pred             ----------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc--cc
Q 036362          133 ----------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF--FP  188 (246)
Q Consensus       133 ----------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  188 (246)
                                            ....+|+||+|++++++++|..||.+.+.......+....+.+...........  ..
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (343)
T cd07880         171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN  250 (343)
T ss_pred             CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence                                  112357999999999999999999987776666666665444443332222211  11


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +....+...........+.+++++.+++.+||..||++|||+.+++.||||+...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence            1112222222233444567899999999999999999999999999999998763

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=8.9e-37  Score=248.11  Aligned_cols=206  Identities=17%  Similarity=0.240  Sum_probs=155.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||+||+|+... +  ++.+|+|+...    .......+.+|+.++..+ +||+|+.+    ...+..++||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   77 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKK-N--DQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEY   77 (327)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeC
Confidence            479999999999999987 5  77888888321    223345677899998888 69999988    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------------------  135 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------------------  135 (246)
                      +++++|..++....   +.....++.||+.||.|||++||+||||||+|||++.++ ..+                    
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~~~~~~~  156 (327)
T cd05617          78 VNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG-HIKLTDYGMCKEGLGPGDTTSTF  156 (327)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC-CEEEeccccceeccCCCCceecc
Confidence            99999998886532   223333445999999999999999999999999998766 122                    


Q ss_pred             -------------------EEEeehhhHHHHHHhhCCCCCCCCcchH---HHHHHHHhh-CCCCcCcCCCCCCccccccc
Q 036362          136 -------------------IARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRLM-GEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       136 -------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .+|+||+||++++|++|..||.......   ....+.... ..+                 
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----------------  219 (327)
T cd05617         157 CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP-----------------  219 (327)
T ss_pred             cCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC-----------------
Confidence                               3569999999999999999996422110   000111110 000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH------HHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV------NDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~------~e~l~h~~~~~~~  243 (246)
                               ...+..+++.+.+++.+||..||++|+++      .++++||||+.++
T Consensus       220 ---------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         220 ---------IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             ---------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence                     01124578999999999999999999984      6999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3.5e-37  Score=243.62  Aligned_cols=210  Identities=19%  Similarity=0.211  Sum_probs=158.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..+++|+... .......+.+|+.+++.++||||+++    ...+..++||
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~-~--~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLH-T--GELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECC-C--CeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            579999999999999999999876 5  77889998332 22334567889999999999999987    5567899999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      ||+++++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++                      
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06646          86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS  165 (267)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCc
Confidence            9999999999886432   122233444999999999999999999999999998665                      


Q ss_pred             -------Cee------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------YTV------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------~~~------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                             .+|            ..+|+||+||++++|++|..||...........+...  .                  
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~--~------------------  225 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--N------------------  225 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC--C------------------
Confidence                   011            2368999999999999999988644322111111000  0                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY  238 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~  238 (246)
                         ..... ......++..+.+|+++||..||++|||++++++|+|
T Consensus       226 ---~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         226 ---FQPPK-LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             ---CCCCC-CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence               00000 0001356889999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-38  Score=258.80  Aligned_cols=212  Identities=20%  Similarity=0.314  Sum_probs=173.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .++|+..||-|+||+||+|.++. +  +...|-|+ ...+....+.++-||+||...+||+|+++    ...+.+++++|
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nke-t--~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKE-T--KLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhccc-c--hhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            46789999999999999999987 5  55666666 45566677889999999999999999998    67789999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      ||+||-.+.++-...    +..+.....|++.||.|||+++|||||||..|||+..+| .+++                 
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG-dirLADFGVSAKn~~t~qkRD  188 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG-DIRLADFGVSAKNKSTRQKRD  188 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC-cEeeecccccccchhHHhhhc
Confidence            999999988886532    223333334999999999999999999999999999888 3333                 


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                 +||||||+++.+|..+.+|-..-+....+..+...  .|+.-           
T Consensus       189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePPTL-----------  255 (1187)
T KOG0579|consen  189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPTL-----------  255 (1187)
T ss_pred             cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCCcc-----------
Confidence                                       44999999999999999998877776666666652  11110           


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                   -.+..++..+.||+.+||.+||..||++.++|+|||+.++++
T Consensus       256 -------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  256 -------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             -------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence                         012467899999999999999999999999999999999875

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-37  Score=242.41  Aligned_cols=209  Identities=22%  Similarity=0.260  Sum_probs=161.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----c------CCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----E------NDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~------~~~   70 (246)
                      ++|++.+.||+|++|.||+|.+.. +  +..+++|...........+.+|+.+++.+ +|+||+++    .      ...
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKK-T--GQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECC-C--CcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            689999999999999999999976 5  67888998544444557889999999999 69999987    1      145


Q ss_pred             eEEEEEeccCcccHHHHHhhhc--ccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL--DIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------  131 (246)
                      ..+++|||+++++|.+++....  ...+..     +..|++.||.|||++|++||||+|+||+++.++            
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~  162 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQ  162 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcccee
Confidence            6899999999999999886532  222222     334999999999999999999999999998665            


Q ss_pred             -----------------Cee--------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          132 -----------------YTV--------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       132 -----------------~~~--------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                       .+|              ..+|+||+|+++++|++|..||...........+..   .+.+.  
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~--  237 (275)
T cd06608         163 LDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR---NPPPT--  237 (275)
T ss_pred             cccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc---cCCCC--
Confidence                             011              137899999999999999999976544333322221   10000  


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                           .......++++.+|+++||..||.+|||+.++++|||+
T Consensus       238 ---------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         238 ---------------------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             ---------------------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence                                 00012467899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-37  Score=226.46  Aligned_cols=207  Identities=19%  Similarity=0.219  Sum_probs=158.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-CCcchhhhhhcccccCCCCceEEe---------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-GVPISILTKISPLKEMDYPLIFRK---------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~~   71 (246)
                      ++|+|.+.||+|||+.||++..-. +  ...||+|...+.. ...+..++|++..++++||||+++         .....
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s-~--~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLS-T--GHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccC-c--ccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            589999999999999999999777 5  7889999844444 667789999999999999999997         23467


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccch-----HHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCC-----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNP-----KTAKILRVLSYYHSNR--CLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~-----~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~-----------  131 (246)
                      .|++++|...|||.+.+....  ...+++     +..+|.+||++||+..  ++||||||.|||+..++           
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            999999999999999997533  112333     3449999999999998  99999999999999755           


Q ss_pred             ---------------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh
Q 036362          132 ---------------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       132 ---------------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~  172 (246)
                                                             --.+.+|||||||++|.|+.|..||....+         . 
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---------~-  247 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---------Q-  247 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---------c-
Confidence                                                   112335599999999999999999974221         1 


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      |..-.-         ......-.++.      ....|+.+.+|+++||+.||.+||++.+++++
T Consensus       248 GgSlaL---------Av~n~q~s~P~------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  248 GGSLAL---------AVQNAQISIPN------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             CCeEEE---------eeeccccccCC------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            110000         00000000000      13489999999999999999999999999865

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=4.9e-37  Score=242.82  Aligned_cols=210  Identities=18%  Similarity=0.203  Sum_probs=159.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..|++|.... .......+.+|+.+++.++||||+++    ...+..+++|
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVN-T--GELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcC-C--CcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            579999999999999999999877 5  77888987322 22234467889999999999999998    5678899999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      ||+++++|.+++....   +.....+..|++.||.|||++|++|+||||+||+++.++                      
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06645          86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS  165 (267)
T ss_pred             eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence            9999999999986532   223333444999999999999999999999999998654                      


Q ss_pred             -------Cee------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------YTV------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------~~~------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                             .+|            ..+|+||+||++++|++|..||..............  ....+..             
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~--~~~~~~~-------------  230 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK--SNFQPPK-------------  230 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc--cCCCCCc-------------
Confidence                   011            136899999999999999999865443322221111  0000000             


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY  238 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~  238 (246)
                              . .....++..+.+++.+||..||.+|||++++++|||
T Consensus       231 --------~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         231 --------L-KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             --------c-cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence                    0 001246788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-38  Score=260.83  Aligned_cols=206  Identities=18%  Similarity=0.288  Sum_probs=166.0

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCccc
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~~~   83 (246)
                      +||+|.||+||.|++.. +  +..+|||- ........+.+..||.+-+.++|.|||++    ..++++-|.||..+||+
T Consensus       582 VLGKGTYG~VYA~RD~~-t--qvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMD-T--QVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeecccc-c--eeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            68999999999999998 6  77778887 44445567789999999999999999998    56678889999999999


Q ss_pred             HHHHHhhh------cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------------
Q 036362           84 LRKVIKNF------LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------  138 (246)
Q Consensus        84 L~~~~~~~------~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------------  138 (246)
                      |.+++...      ++.++..+..||+.||+|||++.|||||||-.|||++.-..-.|++|                   
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence            99999653      24556667779999999999999999999999999986653333333                   


Q ss_pred             ----------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          139 ----------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       139 ----------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                            ||||||++.||.+|++||..-......  +++.          ++             
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFkV----------Gm-------------  793 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFKV----------GM-------------  793 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhhh----------cc-------------
Confidence                                  999999999999999999754433321  1221          10             


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                       .......+..++.+++.||-+|+.+||..||+|+++|..||++.-+
T Consensus       794 -yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  794 -YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             -eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence             0111222357889999999999999999999999999999998763

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=6.2e-37  Score=242.21  Aligned_cols=206  Identities=14%  Similarity=0.089  Sum_probs=157.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+.........+|+|.....  ......+.+|+..+..++||||+++    ..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            4689999999999999999987532323668888873222  2234578899999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |||+++++|.+++.....    .....+..|++.||+|||++|++||||||+||+++.++                    
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~  164 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYT  164 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhc
Confidence            999999999999875321    12223334999999999999999999999999998765                    


Q ss_pred             ----------C---------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 ----------Y---------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 ----------~---------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                .         ....+|+||+||+++++++ |..||...........+.+....+                
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------  228 (266)
T cd05064         165 TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP----------------  228 (266)
T ss_pred             ccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC----------------
Confidence                      0         0113579999999999775 999998766554444433211100                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  .+..++..+.+++.+||..+|..|||++++++
T Consensus       229 ------------~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         229 ------------APRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             ------------CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence                        12457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-37  Score=251.74  Aligned_cols=202  Identities=17%  Similarity=0.212  Sum_probs=153.2

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccC---CCCceEEe----cCCceEEEEEec
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEM---DYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l---~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      ||+|+||.||+|++.. +  ++.||+|+...    ..........|..++...   +||+|+++    ......++||||
T Consensus         1 lG~G~~g~Vy~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~   77 (330)
T cd05586           1 IGKGTFGQVYQVRKKD-T--RRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDY   77 (330)
T ss_pred             CCCCCceEEEEEEECC-C--CCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcC
Confidence            7999999999999987 5  77899998221    112223445566666654   69999987    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++.+..   +.....++.||+.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          78 MSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             CCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence            99999998886532   223333445999999999999999999999999998665                        


Q ss_pred             ---------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ---------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ---------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                     .....+|+||+||++++|++|..||...+.......+..  +...                .+  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~--~~~~----------------~~--  217 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF--GKVR----------------FP--  217 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc--CCCC----------------CC--
Confidence                           012336799999999999999999987655444333322  1000                00  


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCC----CHHHHhcCCCCcCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERI----TVNDALNHHYYRDV  242 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~----s~~e~l~h~~~~~~  242 (246)
                              ...+++++.+|+++||..||.+||    ++.++++||||++.
T Consensus       218 --------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         218 --------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             --------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence                    024688999999999999999998    79999999999875

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=6.2e-37  Score=248.51  Aligned_cols=202  Identities=18%  Similarity=0.253  Sum_probs=154.8

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhc-ccccCCCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKIS-PLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~-~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.||+|+...    .......+..|.. +++.++||||+++    ...+..++||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   77 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKS-D--GSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDY   77 (321)
T ss_pred             CeeeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcC
Confidence            479999999999999977 5  77889997221    1222344555554 5788899999998    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee---------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV---------------------  134 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~---------------------  134 (246)
                      +++++|...+....   +.....+..||+.||.|||++||+||||||+||+++.++ ..                     
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~~~~~  156 (321)
T cd05603          78 VNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG-HVVLTDFGLCKEGVEPEETTSTF  156 (321)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-CEEEccCCCCccCCCCCCccccc
Confidence            99999988876532   222333445999999999999999999999999998765 11                     


Q ss_pred             ------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          135 ------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       135 ------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                        ..+|+||+||++++|++|..||...+.......+..   .+.                    
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~---~~~--------------------  213 (321)
T cd05603         157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH---KPL--------------------  213 (321)
T ss_pred             cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc---CCC--------------------
Confidence                              236799999999999999999987665444333322   100                    


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH----HHHhcCCCCcCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV----NDALNHHYYRDV  242 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~----~e~l~h~~~~~~  242 (246)
                            ..++..+.++.+++.+||+.||.+||++    .++++|+||..+
T Consensus       214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         214 ------QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             ------CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence                  0124567899999999999999999976    499999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-36  Score=239.77  Aligned_cols=235  Identities=24%  Similarity=0.371  Sum_probs=173.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|++|.||+|.+.. +  ++.|++|...   ........+.+|+.+++.++|+||+++    ..++..++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~-~--~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i   77 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKA-T--GEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYL   77 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCC-C--CcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEE
Confidence            579999999999999999999987 5  6788888722   223345678999999999999999998    55678999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ++||++++.+..+..+..   .........|++.||.|||++|++||||+|+||+++.++                    
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          78 VFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence            999999766665554322   222233344999999999999999999999999998654                    


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                          .....+|+||+|+++++|++|.+||......+....+....+...+...........+..
T Consensus       158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07833         158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG  237 (288)
T ss_pred             ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence                                011236799999999999999999988777777766666666555433332222211111


Q ss_pred             -ccCC-CCcchhhhh-CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 -CYEE-SEPKDLAIL-LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 -~~~~-~~~~~~~~~-~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                       .... ......... ...+++++.+|+++||..||++|||+++++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence             0111 111111222 23458999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-36  Score=240.67  Aligned_cols=232  Identities=30%  Similarity=0.529  Sum_probs=179.0

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----cCC--ceEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----END--KLVYQ   74 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~~~--~~~~l   74 (246)
                      |++.+.||.|++|.||+|.+.. +  ++.+++|.....   ......+.+|+.+++.++|+|++++    ...  +..++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~-~--~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKK-T--GELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECC-C--CeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence            7889999999999999999977 5  778899983322   3345568889999999999999988    333  78999


Q ss_pred             EEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |+||++ ++|.+++....    .........|++.||.|||++|++|+||||+||+++.++                   
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~  156 (287)
T cd07840          78 VFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA  156 (287)
T ss_pred             Eecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence            999999 69998886532    112223344999999999999999999999999999765                   


Q ss_pred             -----------Ceee----------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 -----------YTVK----------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 -----------~~~~----------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                 .+|+          .+|+||||+++++|++|..||...+.......+.+..+.+....++.........
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07840         157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE  236 (287)
T ss_pred             cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhh
Confidence                       0122          2569999999999999999999888888888888888888777776654432221


Q ss_pred             cccC-CCCcchhhhhCCC-CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YCYE-ESEPKDLAILLPD-LEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~~~-~~~~~~~~~~~~~-~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      .... ............. .++.+.+++++||..||.+|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             hccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            1111 1111122233344 48999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=2.5e-36  Score=238.48  Aligned_cols=207  Identities=18%  Similarity=0.258  Sum_probs=159.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-------CCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-------GVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      +|++.+.||+|+||.||+|....    +..+|+|......       .....+.+|+++++.++|+||+++    ...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~----~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   76 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQ----GQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNT   76 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcC----CCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCe
Confidence            58899999999999999998643    6678888722211       112468889999999999999998    56689


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      .++++||+++++|.+++.+..   +.....+..|++.||.|||+.|++|+||+|+||+++.++                 
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  156 (265)
T cd06631          77 ISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG  156 (265)
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence            999999999999999986632   223333445999999999999999999999999998654                 


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                 .....+|+||+|+++++|++|..||...+.......+....+.          
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------  226 (265)
T cd06631         157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL----------  226 (265)
T ss_pred             ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC----------
Confidence                                       0012367999999999999999999765543332222221010          


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                      ........++++.+|+++||..+|..|||+.++++||||
T Consensus       227 ----------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         227 ----------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             ----------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                            001124578999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.1e-36  Score=237.79  Aligned_cols=206  Identities=17%  Similarity=0.291  Sum_probs=161.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|+||.||++.... +  +..+++|....   .......+.+|+.+++.++|+||+++    ......+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv   77 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKS-D--SEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIV   77 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcC-C--CceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEE
Confidence            58999999999999999999987 5  67788888321   22345678899999999999999998    567789999


Q ss_pred             EeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee----------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV----------------  134 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~----------------  134 (246)
                      +||+++++|.+++.......+     ..+..|++.||.|||+++++|+||||+||+++.++...                
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence            999999999999876432222     23334999999999999999999999999998665111                


Q ss_pred             -----------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          135 -----------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       135 -----------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                             ..+|+||+|+++++|++|..||...+...........  .                 
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~-----------------  218 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG--Y-----------------  218 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--c-----------------
Confidence                                   2256999999999999999999765543333222210  0                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                               .....+..+.++.+++.+||..+|++|||+.|++.||||
T Consensus       219 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         219 ---------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence                     000124567899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=8e-37  Score=248.27  Aligned_cols=203  Identities=18%  Similarity=0.260  Sum_probs=155.8

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhc-ccccCCCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKIS-PLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~-~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|++.. +  ++.||+|+...    .......+..|.. +++.++|+||+++    ...+..++||||
T Consensus         1 ~~lg~G~fg~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~   77 (325)
T cd05602           1 KVIGKGSFGKVLLARHKA-E--EKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDY   77 (325)
T ss_pred             CeeeeCCCeEEEEEEECC-C--CCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeC
Confidence            479999999999999877 5  77888988221    1122334444444 4677899999988    567889999999


Q ss_pred             cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++                        
T Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~  157 (325)
T cd05602          78 INGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC  157 (325)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence            99999999986532   223333445999999999999999999999999998765                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|..||...+....+..+...   +.                     
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~~---------------------  213 (325)
T cd05602         158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK---PL---------------------  213 (325)
T ss_pred             CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC---Cc---------------------
Confidence                          0112367999999999999999999876655544444331   00                     


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHH----HHhcCCCCcCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVN----DALNHHYYRDV  242 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~----e~l~h~~~~~~  242 (246)
                           ...+.+++++.+++++||+.||.+||++.    ++++|+||..+
T Consensus       214 -----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         214 -----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence                 01246789999999999999999999876    89999999765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.6e-36  Score=242.14  Aligned_cols=209  Identities=20%  Similarity=0.240  Sum_probs=160.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe---------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK---------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~---------~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.+++|...........+.+|+.+++.+ +|+||+++         ..++.
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKK-N--GSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECC-C--CceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            689999999999999999999977 5  77889998433333446788899999999 69999997         13467


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------  131 (246)
                      .+++|||+++++|.+++....  ...+..     ...|++.||.|||+++++||||||+||+++.++             
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  174 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQL  174 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeec
Confidence            999999999999999875421  122332     344999999999999999999999999998765             


Q ss_pred             ----------------Cee--------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          132 ----------------YTV--------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       132 ----------------~~~--------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                      .+|              ..+|+||+||++++|++|..||..............  +.+..    
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~--~~~~~----  248 (286)
T cd06638         175 TSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPR--NPPPT----  248 (286)
T ss_pred             ccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccc--cCCCc----
Confidence                            012              246899999999999999999876544332221111  00000    


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                          .......+..+.+|+.+||..||++|||+.|+++|+||
T Consensus       249 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         249 --------------------LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             --------------------ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence                                00012357789999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.2e-36  Score=238.23  Aligned_cols=202  Identities=17%  Similarity=0.182  Sum_probs=159.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.++||+|+||.||+|....    +..+++|...........+.+|+.+++.++|+||+++   ...+..+++|||
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~----~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   81 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNG----HTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEY   81 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCC----CceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEc
Confidence            579999999999999999998765    5678999855445556788999999999999999998   445678999999


Q ss_pred             cCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           79 TGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      +.+++|.+++.......+..     ...|++.||.|||++|++||||||+||+++.++                      
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTARE  161 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccccc
Confidence            99999999986533222322     333999999999999999999999999998665                      


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                       .....+|+||||++++++++ |+.||.+.+.......+......+                  
T Consensus       162 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------  223 (260)
T cd05067         162 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP------------------  223 (260)
T ss_pred             CCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC------------------
Confidence                             01124689999999999998 999998766544433332211110                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                .....+.++.+++.+||..||+.|||++++++
T Consensus       224 ----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         224 ----------RPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             ----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                      11346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=2.4e-36  Score=239.02  Aligned_cols=207  Identities=16%  Similarity=0.198  Sum_probs=155.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      ......||+|+||.||+|++.. +  +..+++|.. .........+.+|+.+++.++|+||+++    ..++..++++||
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~-~--~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLS-T--QVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             CCceEEEecCCceEEEEeEecC-C--CcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence            3445689999999999999876 5  677888872 2222345578899999999999999998    556789999999


Q ss_pred             cCcccHHHHHhhhcc------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------------
Q 036362           79 TGLLNLRKVIKNFLD------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------------  132 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------------  132 (246)
                      +++++|.+++.....      .....+..|++.||.|||++||+||||||+||+++.+..                    
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~  166 (268)
T cd06624          87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT  166 (268)
T ss_pred             CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc
Confidence            999999999875321      112233449999999999999999999999999975320                    


Q ss_pred             ---------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          133 ---------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       133 ---------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                           ....+|+||+|+++++|++|..||.................                  
T Consensus       167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------  228 (268)
T cd06624         167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK------------------  228 (268)
T ss_pred             ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc------------------
Confidence                                 11236799999999999999999864332211110000000                  


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                              .....+..+++++.+|+++||..+|.+|||+.|++.||||
T Consensus       229 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         229 --------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             --------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence                    0001124578899999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=5.1e-37  Score=250.65  Aligned_cols=238  Identities=30%  Similarity=0.477  Sum_probs=176.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccC-CCCceEEe------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEM-DYPLIFRK------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l-~~~~i~~~------~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..+++|...   ........+.+|+.+++.+ +|+||+++      .....
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRR-T--KEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcC-C--CeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            689999999999999999999876 5  6778888621   1223345677899999999 99999998      23457


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      .++||||++ ++|.+++....  ......+..|++.||.|||++||+||||||+||+++.++                  
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             EEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence            899999999 79999886531  112222444999999999999999999999999998765                  


Q ss_pred             ----------------Cee----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 ----------------YTV----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 ----------------~~~----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                      .+|          ..+|+||+|+++++|++|+.||.+.........+....+.+....+.....
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS  242 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence                            001          236799999999999999999988877777777777666554332221110


Q ss_pred             c--cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          186 F--FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .  ...................+..+.++.+++.+||+.||+.|||+.++++||||+.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~  302 (337)
T cd07852         243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH  302 (337)
T ss_pred             hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence            0  000001111122222334456899999999999999999999999999999998863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.3e-36  Score=237.43  Aligned_cols=211  Identities=20%  Similarity=0.329  Sum_probs=161.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-------CCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-------GVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      +|+..+.||+|++|.||++.... +  ++.+++|......       .....+.+|+.+++.++|+||+++    ...+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~-~--~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   77 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVK-T--GTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSH   77 (268)
T ss_pred             CccccceecCcCceEEEEEEEcC-C--CcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCe
Confidence            58899999999999999999876 5  7788998832111       124578899999999999999998    56788


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee--------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV--------------  134 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~--------------  134 (246)
                      .++|+||+++++|.+++.+..   +.....+..|++.||.|||++|++|+||||+||+++.++...              
T Consensus        78 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~  157 (268)
T cd06630          78 FNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK  157 (268)
T ss_pred             EEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence            999999999999999987542   122233445999999999999999999999999997654111              


Q ss_pred             -----------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          135 -----------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       135 -----------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                   ..+|+||+||+++++++|..||...........+.......          
T Consensus       158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------  227 (268)
T cd06630         158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT----------  227 (268)
T ss_pred             cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC----------
Confidence                                         12579999999999999999997544322222222210000          


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                    .........++++.+++.+||..||..|||+.++++||||+
T Consensus       228 --------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         228 --------------TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             --------------CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence                          00011235788999999999999999999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.5e-36  Score=239.83  Aligned_cols=219  Identities=21%  Similarity=0.219  Sum_probs=161.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|+..++||.|++|.||+|.... +  ++.+++|.....  ......+.+|+++++.++||||+++      ...+.++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   77 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKN-T--GMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG   77 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECC-C--CeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence            579999999999999999999977 5  778899983322  2345678999999999999999997      2345789


Q ss_pred             EEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-----------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-----------  135 (246)
                      +||||+++++|.+++....  ...+     ..+..|++.||.|||++|++|+||+|+||+++.++ ..+           
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~-~~~l~dfg~~~~~~  156 (287)
T cd06621          78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG-QVKLCDFGVSGELV  156 (287)
T ss_pred             EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC-eEEEeecccccccc
Confidence            9999999999998875421  1222     23444999999999999999999999999998665 122           


Q ss_pred             --------------------------EEEeehhhHHHHHHhhCCCCCCCCcc--hHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          136 --------------------------IARLISVGCIFAEMVIQEPLSEDASE--SRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       136 --------------------------~~Di~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                .+|+||+||++++|++|..||.....  ...............+..        
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------  228 (287)
T cd06621         157 NSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL--------  228 (287)
T ss_pred             ccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh--------
Confidence                                      25699999999999999999976522  001111111101000000        


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                            ...     ...-...++.+.+|+.+||..||..|||+.|++.||||++..
T Consensus       229 ------~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         229 ------KDE-----PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             ------ccC-----CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence                  000     000023567899999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=2.8e-36  Score=237.36  Aligned_cols=206  Identities=17%  Similarity=0.243  Sum_probs=162.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|++.+.||+|+||.||+|++.. +  +..+++|....    .......+.+|+++++.++||||+++    ......++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   77 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRD-T--KKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYL   77 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEcc-C--CcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEE
Confidence            58999999999999999999876 5  77789997321    12345688999999999999999987    56788999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |+||+.+++|.+++....   +.....+..|++.||.|||++|++|+||+|+||+++.++                    
T Consensus        78 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  157 (258)
T cd05578          78 VVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT  157 (258)
T ss_pred             EEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence            999999999999987541   222333444999999999999999999999999998765                    


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcch--HHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVIQEPLSEDASES--RERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                       .....+|+||+|+++++|++|..||......  .........   .                 
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~-----------------  217 (258)
T cd05578         158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---A-----------------  217 (258)
T ss_pred             ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---c-----------------
Confidence                             0123367999999999999999999866542  111111110   0                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH--HHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV--NDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~--~e~l~h~~~  239 (246)
                              ....+...++++.+++++||..||.+||++  +|+++||||
T Consensus       218 --------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         218 --------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             --------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence                    001124567999999999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=8.4e-36  Score=234.30  Aligned_cols=206  Identities=16%  Similarity=0.249  Sum_probs=163.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++++.||.|+||.||.++... +  +..+++|..   .........+.+|+.+++.++|+||+++    .+.+..+++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~   77 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTE-D--DSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIE   77 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcC-C--CcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEE
Confidence            69999999999999999999877 5  777888872   2233445678899999999999999998    567889999


Q ss_pred             EeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      |||+++++|.+++.......+.     ..+.|++.||.|||++|++||||+|+||+++.++.                  
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~  157 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM  157 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence            9999999999999764222222     23349999999999999999999999999986660                  


Q ss_pred             --------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          133 --------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       133 --------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                          ....+|+||+|+++++|++|..||...........+..  +...                
T Consensus       158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~----------------  219 (256)
T cd08221         158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYT----------------  219 (256)
T ss_pred             ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCC----------------
Confidence                                01125799999999999999999987655444443332  1110                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                ......+.++.+++.+||..+|..|||+.++++|||+
T Consensus       220 ----------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         220 ----------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             ----------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence                      0014568899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=3.5e-36  Score=239.25  Aligned_cols=206  Identities=17%  Similarity=0.208  Sum_probs=157.0

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||+|+||+||+|.+.. +  ++.+++|....    .......+.+|+.+++.++||||+++    ...+..|+||||+++
T Consensus         1 lg~g~~g~vy~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   77 (277)
T cd05577           1 LGKGGFGEVCACQVKA-T--GKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNG   77 (277)
T ss_pred             CCCCCceeEEEEEEcC-C--CcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCC
Confidence            6999999999999877 5  77888887321    22234456789999999999999998    566789999999999


Q ss_pred             ccHHHHHhhhcccccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           82 LNLRKVIKNFLDIINNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~~~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ++|.+++.+.....+...     ..|++.||.|||++|++||||+|+||+++.++                         
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05577          78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT  157 (277)
T ss_pred             CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence            999999876443333332     33999999999999999999999999998765                         


Q ss_pred             ------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcc
Q 036362          132 ------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPK  199 (246)
Q Consensus       132 ------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (246)
                                  .....+|+||+|+++++|++|..||...........+....-                         .
T Consensus       158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~  212 (277)
T cd05577         158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-------------------------E  212 (277)
T ss_pred             CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-------------------------c
Confidence                        001235799999999999999999976544221111111100                         0


Q ss_pred             hhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          200 DLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       200 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                      .....++..++.+.+++++||+.||.+||     ++.++++||||++++
T Consensus       213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~  261 (277)
T cd05577         213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN  261 (277)
T ss_pred             ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence            00011245789999999999999999999     899999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-36  Score=244.69  Aligned_cols=210  Identities=19%  Similarity=0.260  Sum_probs=158.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~l   74 (246)
                      .|+++++||+||.+.||++....    ...||+|.   ..........+.+||..|.+|+ |..|+.+    ..++++||
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~----~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSD----KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCC----CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            58999999999999999999876    34555555   4455566778999999999995 8999998    55789999


Q ss_pred             EEeccCcccHHHHHhhhccccc----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIIN----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |||+-+ .||.+++++......    ..+..|+|.|++++|.+||||-||||.|+|+- .|                   
T Consensus       438 vmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  438 VMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             Eeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccc
Confidence            999888 999999987543222    22333999999999999999999999999986 34                   


Q ss_pred             --------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          132 --------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       132 --------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                      .....+||||||||+|+|+.|++||.....  .++++.....+.....
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI~~P~~~Ie  593 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAITDPNHEIE  593 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhhcCCCcccc
Confidence                                            122335699999999999999999975332  2222222211111111


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+..                       .-..++.++++.||..||.+|||+.++|+|||++-++
T Consensus       594 fp~~-----------------------~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~  634 (677)
T KOG0596|consen  594 FPDI-----------------------PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQP  634 (677)
T ss_pred             ccCC-----------------------CCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccc
Confidence            1110                       0112399999999999999999999999999998743

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.7e-36  Score=236.19  Aligned_cols=208  Identities=25%  Similarity=0.318  Sum_probs=161.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.++||+|+||.||+|.+.. +  +..+++|....... ...+.+|+++++.++|+||+++    ......++++|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKE-T--GQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcC-C--CcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            689999999999999999999877 5  67888888332222 6789999999999999999998    55688999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+++++|.+++....    ......+..|++.||.|||+.|++||||+|+||+++.++                      
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence            999999999986432    122233444999999999999999999999999998766                      


Q ss_pred             -------Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          132 -------YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       132 -------~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                             .++         ..+|+||+|+++++|++|+.||...........+..   ...                   
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~-------------------  216 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPP-------------------  216 (256)
T ss_pred             ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCC-------------------
Confidence                   001         136799999999999999999976544322111100   000                   


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                          ........+++.+.+++.+||+.||.+|||+.|+++||||
T Consensus       217 ----~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         217 ----PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             ----CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence                0000113567899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6e-37  Score=234.51  Aligned_cols=213  Identities=21%  Similarity=0.292  Sum_probs=165.8

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEEEEEeccC
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQIFEYTG   80 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~lv~e~~~   80 (246)
                      .+.||+|+|+.|--|.... +  +..||+|+ .........++.+|++++...+ |+||+.+    ++...+|+|||-+.
T Consensus        83 ~e~LGeGAyasVqtcv~i~-t--~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~  159 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQ-T--GKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR  159 (463)
T ss_pred             HHHhcCccceeeeeeeeec-c--chhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence            3579999999999999887 6  88999999 4444555778999999999984 9999988    78899999999999


Q ss_pred             cccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------------
Q 036362           81 LLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------------  131 (246)
Q Consensus        81 ~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------------  131 (246)
                      ||+|.+.|.+   +++...+..+.+|+.||.+||.+||.|||+||+|||-...+                          
T Consensus       160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas  239 (463)
T KOG0607|consen  160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS  239 (463)
T ss_pred             CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence            9999999965   44556666666999999999999999999999999965333                          


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchH-----------HHHHHHHhhC
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESR-----------ERISIFRLMG  173 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~-----------~~~~~~~~~~  173 (246)
                                                 +.-|.+|.||||+|+|-|+.|.+||.+.-..+           --..+++.+.
T Consensus       240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ  319 (463)
T KOG0607|consen  240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ  319 (463)
T ss_pred             CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence                                       33444559999999999999999998632211           1111111110


Q ss_pred             CCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          174 EPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .       +...+       +       ...|..+|.+++|+++.+|..|+..|.++.+.++|||++...
T Consensus       320 E-------GkYeF-------P-------dkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  320 E-------GKYEF-------P-------DKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             c-------cCCcC-------C-------hhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            0       00011       1       112357899999999999999999999999999999998753

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-37  Score=236.16  Aligned_cols=210  Identities=20%  Similarity=0.299  Sum_probs=174.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|..+++||+|.||+|-+|+.+. +  ++.||+|+    ..........-+.|-++|+..+||.+..+    ...+.+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKa-t--~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl  243 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKA-T--GKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL  243 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecc-c--CceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence            6789999999999999999999988 6  88899988    22223345667788999999999999776    567899


Q ss_pred             EEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      |.||||++||.|.-.+++   +++.....+-..|++||.|||+++||+||+|.+|.|+|.+| .+|++|           
T Consensus       244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG-HIKitDFGLCKE~I~~g  322 (516)
T KOG0690|consen  244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG-HIKITDFGLCKEEIKYG  322 (516)
T ss_pred             EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC-ceEeeecccchhccccc
Confidence            999999999999877765   44555555666999999999999999999999999999998 344444           


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  .|.+|+++|||+.|+.||...+....+..|...-                  
T Consensus       323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed------------------  384 (516)
T KOG0690|consen  323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED------------------  384 (516)
T ss_pred             ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh------------------
Confidence                                        8999999999999999999877766555544310                  


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                 ...++.++++++.|+..+|.+||.+|.     .|.|+.+|+||..++
T Consensus       385 -----------~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  385 -----------LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             -----------ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence                       011367899999999999999999999     589999999999874

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.4e-35  Score=235.15  Aligned_cols=211  Identities=22%  Similarity=0.326  Sum_probs=158.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CC-------CcchhhhhhcccccCCCCceEEe----c
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DG-------VPISILTKISPLKEMDYPLIFRK----E   67 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~-------~~~~~~~E~~~l~~l~~~~i~~~----~   67 (246)
                      +|.+.+.||+|+||.||+|.... +  +..+++|.....    ..       ..+.+.+|+.+++.++|+|++++    .
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   78 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVT-T--GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET   78 (272)
T ss_pred             ceeecceecccCceEEEEEeecC-C--CceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence            58899999999999999999876 5  778888862111    01       12357789999999999999988    5


Q ss_pred             CCceEEEEEeccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------  131 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------  131 (246)
                      ..+..++||||+++++|.+++.+...-   ....+..|++.||.|||++|++||||+|+||+++.++             
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          79 TEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             cCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            667899999999999999998764211   1122333999999999999999999999999997544             


Q ss_pred             ---------------------------C--eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          132 ---------------------------Y--TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       132 ---------------------------~--~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                 .  ....+|+||+|++++++++|..||..................+       
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------  231 (272)
T cd06629         159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP-------  231 (272)
T ss_pred             cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC-------
Confidence                                       0  1223689999999999999999997544433222111100000       


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                      .......+.++.++.+++.+||..||..|||++++++|||+
T Consensus       232 ----------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         232 ----------------PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             ----------------cCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence                            00011124578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=236.33  Aligned_cols=229  Identities=31%  Similarity=0.524  Sum_probs=169.2

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccC---CCCceEEe----cCCc---
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEM---DYPLIFRK----ENDK---   70 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l---~~~~i~~~----~~~~---   70 (246)
                      |++.+.||+|+||.||+|.+.. +  +..+++|...   ........+.+|+.+++.+   +|+||+++    ...+   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   77 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLN-T--GRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR   77 (287)
T ss_pred             CeEEEEecccCceEEEEEEECC-C--CCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence            7889999999999999999976 5  7788999832   1222334566787776655   69999988    2223   


Q ss_pred             --eEEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------
Q 036362           71 --LVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------  135 (246)
Q Consensus        71 --~~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------  135 (246)
                        ..+++|||++ ++|.+++.......++     .+..|++.||.|||++|++|+||+|+||+++.++ ..+        
T Consensus        78 ~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-~~~l~dfg~~~  155 (287)
T cd07838          78 ELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-QVKIADFGLAR  155 (287)
T ss_pred             CceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC-CEEEeccCcce
Confidence              4899999999 6898888654322232     2334999999999999999999999999998765 111        


Q ss_pred             ------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          136 ------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       136 ------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                    .+|+||+||++++|++|.+||.+.........+.+..+.+....++....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07838         156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS  235 (287)
T ss_pred             eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence                                          36799999999999999999998887777777777666654443332221


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ....  .+............+..++.+.+++++||..||.+|||+.|+++||||
T Consensus       236 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         236 LPRS--SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cchh--hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            1100  111112222233345678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=8e-36  Score=235.05  Aligned_cols=202  Identities=15%  Similarity=0.134  Sum_probs=157.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.++||+|+||.||+|....    +..+++|...........+.+|+.+++.++|++++++   ......+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~   81 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNG----NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEY   81 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecC----CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEe
Confidence            689999999999999999998765    4568888744434455678999999999999999998   445568999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      +++++|.+++.......+     ..+..|++.||.|||++|++||||||+||+++.++                      
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05070          82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence            999999999865322222     33344999999999999999999999999998765                      


Q ss_pred             --------C---------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 --------Y---------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 --------~---------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                              .         ....+|+||||+++++|++ |..||.+.+..+....+......                   
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------  222 (260)
T cd05070         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM-------------------  222 (260)
T ss_pred             CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-------------------
Confidence                    0         0124679999999999999 88999876554444433321000                   


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                               ......+..+.+|+.+||..||++|||+.++.+
T Consensus       223 ---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         223 ---------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             ---------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                     011356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1e-35  Score=240.82  Aligned_cols=201  Identities=20%  Similarity=0.211  Sum_probs=154.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC---cchhhhhhcccccCCCCceEEe---cC-Cc-eEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV---PISILTKISPLKEMDYPLIFRK---EN-DK-LVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~---~~-~~-~~~l   74 (246)
                      +..+.+.||+|+||+||++.+..    ...||+|........   ...+.+|+.+|.+++||||+++   .. .. ..++
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g----~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i  117 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRG----TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI  117 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCC----ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence            34566779999999999999976    223888883222211   5589999999999999999998   22 22 6999


Q ss_pred             EEeccCcccHHHHHhhhcccccchH-----HHHHHHHHHHHhhCc-eeeccCCCCCeEEecCCCeee-------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIINNPK-----TAKILRVLSYYHSNR-CLHGRLNPYQALINLSDYTVK-------------  135 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~-----~~qil~~L~~lH~~~-i~H~Dikp~Nil~~~~~~~~~-------------  135 (246)
                      ||||+++|+|.+++.......+...     ++||+.|+.|||+++ ||||||||+|||++.++...|             
T Consensus       118 VtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  118 VTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             EEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            9999999999999976322333332     339999999999999 999999999999998752333             


Q ss_pred             ----------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          136 ----------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       136 ----------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  .+|+||||+++|||++|+.||...........+......|.           
T Consensus       198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~-----------  266 (362)
T KOG0192|consen  198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP-----------  266 (362)
T ss_pred             cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----------
Confidence                                        34599999999999999999998776333333332111111           


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                      .+..+++.+.+|+++||..||.+||+..+++
T Consensus       267 ----------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  267 ----------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             ----------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence                            1134789999999999999999999999976

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1e-35  Score=234.55  Aligned_cols=202  Identities=17%  Similarity=0.139  Sum_probs=158.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.++||+|++|.||+|....    ...|++|...........+.+|+.+++.++|+||+++    ...+..+++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNN----STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecC----CceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            689999999999999999998765    4568888744334446788999999999999999997    56678899999


Q ss_pred             ccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           78 YTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      |+++++|.+++.........     .+..|++.||.|||++|++||||||+||+++.++                     
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05072          82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR  161 (261)
T ss_pred             cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence            99999999998654322222     2334999999999999999999999999998765                     


Q ss_pred             ---------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ---------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ---------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                               .+|         ..+|+|||||++++|++ |..||...........+......                  
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------------------  223 (261)
T cd05072         162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM------------------  223 (261)
T ss_pred             CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC------------------
Confidence                     001         13679999999999998 99999876554433333321100                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                .....++.++.+++.+||..||++|||++++.+
T Consensus       224 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         224 ----------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             ----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                      011357789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=5.1e-36  Score=239.61  Aligned_cols=214  Identities=17%  Similarity=0.193  Sum_probs=160.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|..+..  ......||+|......  .....+.+|+.+++.++|+||+++    ...+..+
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL   85 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence            5899999999999999999976531  1224578888732222  123457789999999999999998    5567899


Q ss_pred             EEEeccCcccHHHHHhhhccc-------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI-------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~-------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------  132 (246)
                      ++|||+++++|.+++......             ....+..|++.||.|||++||+||||||+||+++.++.        
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~  165 (288)
T cd05061          86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM  165 (288)
T ss_pred             EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCc
Confidence            999999999999999653211             11224449999999999999999999999999986540        


Q ss_pred             --------------------------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          133 --------------------------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       133 --------------------------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                      ....+|+||+||++++|++ |..||.+....+....+... +.+    
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~----  240 (288)
T cd05061         166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-GYL----  240 (288)
T ss_pred             cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC----
Confidence                                            0112469999999999998 78888765544433322210 000    


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc------CCCCcCCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN------HHYYRDVV  243 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~------h~~~~~~~  243 (246)
                                             ......++.+.+++.+||..||+.|||+.++++      ||||.++.
T Consensus       241 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         241 -----------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             -----------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence                                   011345789999999999999999999999987      99999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=6.1e-36  Score=235.00  Aligned_cols=203  Identities=18%  Similarity=0.200  Sum_probs=158.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +|++.+.||+|+||.||++.+.. +  ++.+++|..  .........+.+|+.+++.++|+||+++    ..++..+++|
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   77 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVN-S--DQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVM   77 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcC-C--CceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEE
Confidence            68999999999999999999987 5  778888872  2233445678889999999999999987    5678999999


Q ss_pred             eccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ||+++++|.+++.......+     ..+..|++.||.|||++|++|+||||+||+++.++                    
T Consensus        78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  157 (255)
T cd08219          78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA  157 (255)
T ss_pred             eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence            99999999998865322222     23344999999999999999999999999998655                    


Q ss_pred             ------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 ------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 ------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                        .....+|+||+|+++++|++|..||...+.......+..  +...                 
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~-----------------  218 (255)
T cd08219         158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ--GSYK-----------------  218 (255)
T ss_pred             ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc--CCCC-----------------
Confidence                              011236799999999999999999986554333332222  1000                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                               ..+..++..+.+|+.+||..||.+|||+.++++-
T Consensus       219 ---------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         219 ---------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ---------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                     0113567889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.2e-35  Score=233.60  Aligned_cols=202  Identities=13%  Similarity=0.094  Sum_probs=158.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||++.+..    ...+++|...........+.+|+.+++.++||||+++    ......+++||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~----~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   79 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA----QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE   79 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc----CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence            579999999999999999998865    4568888744444445688999999999999999997    56678999999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+++++|.+++.....    ........|++.||.|||++|++||||||+||+++.++                      
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence            9999999999865321    11222334999999999999999999999999998655                      


Q ss_pred             --------Ce---------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 --------YT---------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 --------~~---------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                              .+         ...+|+||+|+++++|++ |+.||...+.......+......+                  
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~------------------  221 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY------------------  221 (256)
T ss_pred             CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC------------------
Confidence                    00         123679999999999999 899998776555444443310000                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                .+...+.++.+++.+||..||++|||++++++
T Consensus       222 ----------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         222 ----------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             ----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                      01235678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=3.1e-36  Score=237.90  Aligned_cols=212  Identities=19%  Similarity=0.280  Sum_probs=162.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||.|++|.||++.+.. +  ++.+++|....  .......+.+|+.+++.++||||+++    ...+..+++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRP-T--GKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC   77 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcC-C--CcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEE
Confidence            578999999999999999999976 5  77888887222  22344578899999999999999987    566899999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeee---------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVK---------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~---------------  135 (246)
                      +||+++++|.+++....    .........|++.||.|||+ .|++||||||+||+++.++ ..+               
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~-~~~l~d~g~~~~~~~~~~  156 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG-QIKLCDFGVSGQLVNSLA  156 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC-CEEEeecccchhhHHHHh
Confidence            99999999999987542    12223344499999999999 9999999999999999765 122               


Q ss_pred             ----------------------EEEeehhhHHHHHHhhCCCCCCCCcc--hHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          136 ----------------------IARLISVGCIFAEMVIQEPLSEDASE--SRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       136 ----------------------~~Di~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                            .+|+||+|+++++|++|..||.....  .............+.+.             
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------  223 (265)
T cd06605         157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR-------------  223 (265)
T ss_pred             hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC-------------
Confidence                                  25799999999999999999875421  11111111111111000             


Q ss_pred             ccCCCCcchhhhhCC-CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLP-DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  ... .+++++.+++.+||..||.+|||+.+++.||||+..
T Consensus       224 ------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         224 ------------LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             ------------CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence                        001 278899999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=5e-36  Score=244.30  Aligned_cols=238  Identities=26%  Similarity=0.371  Sum_probs=177.3

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccC-CCCceEEec--------CCc
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEM-DYPLIFRKE--------NDK   70 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l-~~~~i~~~~--------~~~   70 (246)
                      +|++.+.||+|+||.||++.+.. +..+..+|+|...   ........+.+|+.+++.+ +|+||+++.        ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAE-TSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCC-CCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            58999999999999999999876 2225578888722   1222345678899999999 599999981        124


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ..++++++++ ++|.+++....   .........||+.||.|||++|++||||||+||+++.++                
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            6789999998 79998886432   222233444999999999999999999999999998654                


Q ss_pred             -----------------Cee----------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 -----------------YTV----------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 -----------------~~~----------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                       .+|          ..+|+||+||++++|++|.+||...+.......+....|.+....+....
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG  238 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence                             011          12579999999999999999999888888888888888877655433322


Q ss_pred             Ccc--ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ...  .+...........+....+..+..+.+|+.+||..||.+|||+.+++.|||+.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            211  1111122222333344456678999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-36  Score=235.51  Aligned_cols=210  Identities=22%  Similarity=0.278  Sum_probs=161.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.... +  +..+++|.... .......+.+|+.+++.++||||+++    ...+..+++|
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIA-T--GELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecC-C--CCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence            689999999999999999999877 5  66788888322 22245688999999999999999998    5678899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      ||+++++|.+++....    +.....+..|++.||.|||++|++||||||+||+++.++                     
T Consensus        80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  159 (262)
T cd06613          80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK  159 (262)
T ss_pred             eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence            9999999999886542    222223344999999999999999999999999999765                     


Q ss_pred             --------Ceee------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 --------YTVK------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 --------~~~~------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                              .+|+            .+|+||+|+++++|++|..||............... +.... .            
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~-~~~~~-~------------  225 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS-NFPPP-K------------  225 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cCCCc-c------------
Confidence                    0011            257999999999999999999866544333222210 00000 0            


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY  238 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~  238 (246)
                                .......+.++.+|+++||..||..|||+.+++.|+|
T Consensus       226 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         226 ----------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             ----------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence                      0001345778999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.1e-35  Score=234.76  Aligned_cols=204  Identities=15%  Similarity=0.143  Sum_probs=159.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .+|++.+.||+|+||.||+|.+.. .  +..+++|...........+.+|+.+++.++|+||+++    ......+++||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~--~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKK-Y--SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEec-C--CceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence            468899999999999999999877 5  7788999844444445678899999999999999988    55678899999


Q ss_pred             ccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      |+++++|.+++.......+..     +..|++.||.|||++|++||||||+||+++.++                     
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence            999999999986543333333     234999999999999999999999999998655                     


Q ss_pred             ---------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ---------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ---------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                               .+|         ..+|+|||||++++|++ |..||.+.........+.....                   
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-------------------  223 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR-------------------  223 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC-------------------
Confidence                     001         13679999999999998 8999987654433333222100                   


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                               ...+...++++.+++.+||..||++|||+.++++.
T Consensus       224 ---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         224 ---------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             ---------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence                     00124578999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.3e-36  Score=239.06  Aligned_cols=214  Identities=18%  Similarity=0.175  Sum_probs=161.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||+||++.+.. +  +..+++|...  ........+.+|+++++.++||||+++    ......++|
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIP-T--GTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcC-C--CcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence            579999999999999999999876 5  7778888722  223345678899999999999999998    556889999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||+++++|.+++.+..   .........+++.||.|||+ +|++||||||+||+++.++                    
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~  161 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT  161 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence            99999999999886632   12223334499999999997 6999999999999998655                    


Q ss_pred             ----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHH--------HHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 ----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRE--------RISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 ----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                      .....+|+||+||+++++++|..||........        ............+          
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  231 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP----------  231 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC----------
Confidence                            011236799999999999999999986543210        0111110000000          


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  ..  ....++.++.+|+.+||..||..|||+.|+++|+||.+-
T Consensus       232 ------------~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         232 ------------RL--PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             ------------CC--CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence                        00  001367889999999999999999999999999999664

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.3e-35  Score=239.21  Aligned_cols=213  Identities=18%  Similarity=0.216  Sum_probs=163.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||++.+.. +  ++.|++|.....    ......+.+|+.+++.++||||+++    ..++..+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~-~--~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   77 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKE-T--RQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLC   77 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECC-C--CcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEE
Confidence            579999999999999999999987 5  778888872221    1234467789999999999999998    5567899


Q ss_pred             EEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      ++|||++|++|.+++.....   ......+.|++.||.|||++|++||||||+||+++.++.                  
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          78 MVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence            99999999999999966421   122233449999999999999999999999999986540                  


Q ss_pred             --------------------------ee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          133 --------------------------TV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       133 --------------------------~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                ++         ..+|+|||||++++|++|..||.+............. ..+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~  236 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD-DIEWP  236 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-ccCCC
Confidence                                      01         1267999999999999999999765543333322221 00000


Q ss_pred             CcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC---HHHHhcCCCCcCCC
Q 036362          178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT---VNDALNHHYYRDVV  243 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s---~~e~l~h~~~~~~~  243 (246)
                                               ......++++.+++.+||..||++|||   +.++++||||....
T Consensus       237 -------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~  280 (305)
T cd05609         237 -------------------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD  280 (305)
T ss_pred             -------------------------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence                                     001246889999999999999999998   79999999997753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1e-35  Score=235.25  Aligned_cols=208  Identities=20%  Similarity=0.305  Sum_probs=157.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC------CCCcchhhhhhcccccCCCCceEEe------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP------DGVPISILTKISPLKEMDYPLIFRK------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~------~~~   69 (246)
                      .+|++.+.||+|+||.||+|.... +  +..|++|.....      ......+.+|+.+++.++||||+++      ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   78 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVD-T--GRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE   78 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcC-C--CcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC
Confidence            368999999999999999999877 5  778888872211      1123467889999999999999987      224


Q ss_pred             ceEEEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------  132 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------  132 (246)
                      ...++++||+++++|.+++.....   .....+..|++.||.|||++|++||||||+||+++.++.              
T Consensus        79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence            678999999999999999865321   122233449999999999999999999999999986540              


Q ss_pred             ---------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          133 ---------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       133 ---------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                 ....+|+||+||+++++++|..||..............   .+..        
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~~~--------  227 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTN--------  227 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CCCC--------
Confidence                                       01236799999999999999999986544333222111   1100        


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                      ......+++.+++++ +|+..+|++|||++|+++||||+
T Consensus       228 ----------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         228 ----------------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             ----------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence                            001135678899999 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=7e-36  Score=235.55  Aligned_cols=205  Identities=19%  Similarity=0.323  Sum_probs=159.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      +|++.+.||+|+||.||++.+.. +  +..+++|...   ........+.+|+.+++.++|+||+++      ..+...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKS-D--GKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecC-C--CCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence            58999999999999999999877 5  6778888732   222334567889999999999999987      2456789


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHh-----hCceeeccCCCCCeEEecCCCee-------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYH-----SNRCLHGRLNPYQALINLSDYTV-------  134 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH-----~~~i~H~Dikp~Nil~~~~~~~~-------  134 (246)
                      ++|||+++++|.+++....  ...+.     .+..||+.||.|||     +.+++||||||+||+++.++ ..       
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~-~~kl~d~g~  156 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN-NVKLGDFGL  156 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC-CEEEecccc
Confidence            9999999999999986531  11222     23349999999999     99999999999999999755 11       


Q ss_pred             --------------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          135 --------------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       135 --------------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                      ..+|+||||+++++|++|..||...+.......+...  .        
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~--------  226 (265)
T cd08217         157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG--K--------  226 (265)
T ss_pred             cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC--C--------
Confidence                                            1257999999999999999999876533322222210  0        


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                        ........+.++.+++.+||..+|..|||+.++++|||+
T Consensus       227 ------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         227 ------------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             ------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence                              001124578899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.7e-36  Score=236.58  Aligned_cols=214  Identities=18%  Similarity=0.278  Sum_probs=166.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|++|.||+|++.. +  ++.+++|......  .....+.+|+..+..++|+||+++    ...+..+++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~-~--~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKP-T--GKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV   77 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcC-C--CcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence            479999999999999999999987 5  7788888832222  346788999999999999999998    566899999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDY-------------------  132 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~-------------------  132 (246)
                      +||+++++|.+++....   +.....++.|++.||.|||+ +|++||||+|+||+++.++.                   
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence            99999999999997632   12222344499999999999 99999999999999986650                   


Q ss_pred             ----------e---------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          133 ----------T---------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       133 ----------~---------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                +         ...+|+||||+++++|++|..||.....................                
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------------  221 (264)
T cd06623         158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP----------------  221 (264)
T ss_pred             cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC----------------
Confidence                      0         11368999999999999999999776421111112221111100                


Q ss_pred             CCCCcchhhhhCCC-CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPD-LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~-~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                               ..... +++.+.+++++||..+|+.|||+.++++|||+++++
T Consensus       222 ---------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~  263 (264)
T cd06623         222 ---------SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD  263 (264)
T ss_pred             ---------CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence                     00123 788999999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3.4e-36  Score=239.32  Aligned_cols=212  Identities=21%  Similarity=0.296  Sum_probs=163.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +.|+..++||+|+||.||.|.+.. +  +..+|+|....  .......+.+|+.+++.++|+||+++    .+.+..++|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNR-T--QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII   80 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEcc-C--CEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            368899999999999999999876 5  67889987322  12334578889999999999999998    567889999


Q ss_pred             EeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           76 FEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |||+++++|.+++....  ......+..|++.||.|||+++++|+||+|+||+++.++                      
T Consensus        81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06640          81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence            99999999999886532  122223344999999999999999999999999999665                      


Q ss_pred             ----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          132 ----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       132 ----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                      .....+|+|||||++++|++|..||...........+..  +.+                    
T Consensus       161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~--------------------  218 (277)
T cd06640         161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NNP--------------------  218 (277)
T ss_pred             ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--CCC--------------------
Confidence                            011125699999999999999999876543322211110  000                    


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                            .......+..+.+++.+||..+|..|||+.++++||||.+...
T Consensus       219 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         219 ------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             ------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence                  0112346788999999999999999999999999999987653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=8.3e-36  Score=234.40  Aligned_cols=207  Identities=22%  Similarity=0.280  Sum_probs=161.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC------CCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP------DGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +|+..+.||+|++|.||+|.... +  +..|++|.....      ......+.+|+.+++.++|+||+++    ......
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   77 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLD-D--GDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNL   77 (258)
T ss_pred             CccccceeeecCCceEEEEEEcC-C--CcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeE
Confidence            58889999999999999999875 4  778889972221      1234578899999999999999988    566789


Q ss_pred             EEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++++||+++++|.+++.+...   .....+..|++.||.|||+.|++|+||+|+||+++.++                  
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~  157 (258)
T cd06632          78 YIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF  157 (258)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence            999999999999999876432   12222344999999999999999999999999997655                  


Q ss_pred             -------------------C-eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          132 -------------------Y-TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       132 -------------------~-~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                         . ....+|+||+|++++++++|..||..................                 
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----------------  220 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL-----------------  220 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC-----------------
Confidence                               0 122367999999999999999999765533332222211000                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                ...++.+++++.+|+.+||+.+|.+|||+.+++.|||+
T Consensus       221 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         221 ----------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             ----------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence                      01124578999999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3.3e-36  Score=241.26  Aligned_cols=213  Identities=21%  Similarity=0.251  Sum_probs=164.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||++.... +  +..+++|... ........+.+|+.+++.++||||+++    ...+..++|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVA-T--GQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcC-C--CCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            579999999999999999998876 4  6678888732 233345678899999999999999998    4567899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      ||+++++|.+++.+..  ......+..|++.||.|||++|++||||||+||+++.++                       
T Consensus        96 e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~  175 (293)
T cd06647          96 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  175 (293)
T ss_pred             ecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccc
Confidence            9999999999987532  222333444999999999999999999999999998654                       


Q ss_pred             ------C---------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ------Y---------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ------~---------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                            .         ....+|+||+|++++++++|..||.......+...+.. .+.+                     
T Consensus       176 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~---------------------  233 (293)
T cd06647         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP---------------------  233 (293)
T ss_pred             cCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCC---------------------
Confidence                  0         01236799999999999999999976554332211111 0000                     


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                          .......++..+.+++++||..+|..||++.+++.||||+...
T Consensus       234 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         234 ----ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             ----CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence                0001134678899999999999999999999999999999765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-36  Score=240.67  Aligned_cols=213  Identities=19%  Similarity=0.277  Sum_probs=172.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +.|+.-++||+|+||.|+-|.... +  ++.||.|.    ......-....++|-.+|++++.++||.+    +..+.+|
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvra-T--GKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC  261 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRA-T--GKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC  261 (591)
T ss_pred             cceeeeEEEecccccceeEEEEec-c--hhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence            568888999999999999999988 6  88888777    33344556778999999999999999998    7789999


Q ss_pred             EEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      +|+..++||||.-.|.+.....+.     .++++|+.||.+||..+||+||+||+|||+|..| .+.++|          
T Consensus       262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G-hvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG-HVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC-CeEeeccceEEecCCC
Confidence            999999999998887665544443     3555999999999999999999999999999777 455555          


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  .||+||++|+|+.|..||....+......+-+..-.                
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~----------------  404 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE----------------  404 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc----------------
Confidence                                        799999999999999999876554333222222111                


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                               ...+++..+|+++++|.+.+|++||.+|+     +++++-+||||++++
T Consensus       405 ---------~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln  453 (591)
T KOG0986|consen  405 ---------DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN  453 (591)
T ss_pred             ---------chhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence                     11122367899999999999999999998     577999999999975

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=9.8e-36  Score=236.70  Aligned_cols=209  Identities=21%  Similarity=0.286  Sum_probs=162.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      -|++.+.||+|+||.||+|.+.. +  +..+|+|....  .......+.+|+.+++.++||||+++    ..+...++||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   81 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNR-T--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   81 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECC-C--CcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence            37889999999999999998876 5  77889997322  12234568889999999999999988    5677899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------------  135 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------------  135 (246)
                      ||+++++|.+++....  ......+..|++.||.|||++|++|+||||+||+++.++ ..+                   
T Consensus        82 e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~-~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06641          82 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC-CEEEeecccceecccchhhhcc
Confidence            9999999999986532  222233344999999999999999999999999998665 111                   


Q ss_pred             --------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          136 --------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       136 --------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                          .+|+||+||++++|++|..||...........+..   ...                   
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~-------------------  218 (277)
T cd06641         161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK---NNP-------------------  218 (277)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc---CCC-------------------
Confidence                                24699999999999999999976544332222211   000                   


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                            .......+.++.+++.+||..+|..||++.++++||||.+..
T Consensus       219 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         219 ------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             ------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence                  001145788999999999999999999999999999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-36  Score=237.77  Aligned_cols=212  Identities=23%  Similarity=0.308  Sum_probs=162.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCC---CCceEEe----cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMD---YPLIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~---~~~i~~~----~~~~~~~   73 (246)
                      .|++.+.||+|+||.||+|.+.. +  +..+++|...  ........+.+|+.+++.++   |||++++    ..+...+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~   78 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVP-T--GRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW   78 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcC-C--CcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence            58999999999999999999876 5  7788999732  22334457888999999986   9999987    4567899


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ++|||+++++|.+++....  ......++.|++.||.|||++|++||||+|+||+++.++                    
T Consensus        79 lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          79 IIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             EEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence            9999999999999986531  111222333999999999999999999999999999665                    


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         .....+|+||+||++++|++|..||...........+...  .+                 
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~-----------------  219 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KP-----------------  219 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CC-----------------
Confidence                               0123477999999999999999999765432221111100  00                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                            ...  .....+.++.+++.+||..||.+|||+.+++.||||++...
T Consensus       220 ------~~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~  263 (277)
T cd06917         220 ------PRL--EDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSK  263 (277)
T ss_pred             ------CCC--CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcccc
Confidence                  000  00236789999999999999999999999999999988654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-35  Score=234.53  Aligned_cols=207  Identities=19%  Similarity=0.143  Sum_probs=157.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+..+......+++|....  .......+.+|+.+++.++||||+++    ...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            579999999999999999999865322245788887322  22234567889999999999999998    556789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++                    
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY  163 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence            999999999999865332    12223344999999999999999999999999998765                    


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                          .....+|+||||+++++|++ |..||...........+......+               
T Consensus       164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------  228 (266)
T cd05033         164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP---------------  228 (266)
T ss_pred             eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC---------------
Confidence                                00123679999999999997 999987655444333332210000               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                   .....++.+.+++.+||+.||+.|||+.+++++
T Consensus       229 -------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         229 -------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             -------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                         013567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.8e-35  Score=233.99  Aligned_cols=207  Identities=14%  Similarity=0.157  Sum_probs=150.4

Q ss_pred             CCccceeee--CCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELI--GRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~l--g~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.+  |+|+||.||++.... +  +..+++|........  .  .|+.....+ +|+||+++    ...+..++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~--~~~~~~k~~~~~~~~--~--~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i   86 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKP-T--QKLFVQKIIKAKNFN--A--IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL   86 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcC-C--CcEEEEEEEehhhcc--h--hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence            457777776  999999999999877 5  777888883221111  1  122222222 69999998    45678999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      ||||+++++|.+++....   +.....+..|+++||.|||++|++||||||+||+++.++...++               
T Consensus        87 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~  166 (267)
T PHA03390         87 IMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCY  166 (267)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccC
Confidence            999999999999997642   22223334499999999999999999999999999876612222               


Q ss_pred             --------------------EEeehhhHHHHHHhhCCCCCCCCcchHH-HHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          137 --------------------ARLISVGCIFAEMVIQEPLSEDASESRE-RISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       137 --------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                          +|+||+|+++++|++|..||........ ..........                     
T Consensus       167 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------  225 (267)
T PHA03390        167 DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK---------------------  225 (267)
T ss_pred             CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc---------------------
Confidence                                4699999999999999999975443221 1111111000                     


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-HHHHhcCCCCcC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-VNDALNHHYYRD  241 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-~~e~l~h~~~~~  241 (246)
                           ....++..++.+.+|+.+||+.||.+||+ ++++|+||||++
T Consensus       226 -----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        226 -----KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             -----cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence                 00112468899999999999999999996 599999999985

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.5e-35  Score=231.79  Aligned_cols=203  Identities=11%  Similarity=0.059  Sum_probs=157.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||.+.+..    ...+|+|...........+.+|+.+++.++||||+++    ......+++||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~----~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG----QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE   79 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC----CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence            579999999999999999998765    3458888744334445678999999999999999998    45567899999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+.+++|.+++.....    .....++.|++.||.|||++|++|+||||+||+++.++                      
T Consensus        80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05113          80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV  159 (256)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence            9999999999865322    12233444999999999999999999999999998655                      


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                       .....+|+||||+++++|++ |..||...........+......+                  
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------  221 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY------------------  221 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC------------------
Confidence                             00123669999999999998 999987665544333332211000                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                .....++.+.+++.+||..||.+|||+.+++.+
T Consensus       222 ----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         222 ----------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             ----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence                      012457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=7e-36  Score=241.61  Aligned_cols=229  Identities=12%  Similarity=0.077  Sum_probs=155.4

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.+.+|.|  |.||.++... +  ++.||+|...   ........+.+|+.+++.++|+||+++    ...+..+++|||
T Consensus         6 i~~~~~~~--~~v~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~   80 (314)
T cd08216           6 IGKCFEDL--MIVHLAKHKP-T--NTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPL   80 (314)
T ss_pred             hhHhhcCC--ceEEEEEecC-C--CCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEec
Confidence            34444444  5556555555 5  7789999832   233445689999999999999999997    566789999999


Q ss_pred             cCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           79 TGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      +++++|.+++.......+.     .++.|++.||+|||++||+||||||+||+++.++                      
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (314)
T cd08216          81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV  160 (314)
T ss_pred             cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence            9999999999764322232     3344999999999999999999999999998644                      


Q ss_pred             --------------C-----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 --------------Y-----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 --------------~-----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                    .           ....+|+||+||++++|++|..||...........  ...+..........  .
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~--~  236 (314)
T cd08216         161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLE--KVRGTVPCLLDKST--Y  236 (314)
T ss_pred             cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhccCccccccCc--h
Confidence                          0           11237899999999999999999987554332221  12122111100000  0


Q ss_pred             ccccccc---------CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCY---------EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +......         ..............+++++.+|+.+||..||++|||++++|+||||+.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            0000000         00000001111234567899999999999999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2.2e-35  Score=231.67  Aligned_cols=206  Identities=19%  Similarity=0.293  Sum_probs=162.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||.|++|.||++.+.. +  +..+++|.....   ......+.+|+++++.++|+|++++    ......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv   77 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKS-D--GKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIV   77 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcC-C--CcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEE
Confidence            68999999999999999999986 5  778888883222   2345678899999999999999987    456899999


Q ss_pred             EeccCcccHHHHHhhhc-------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------
Q 036362           76 FEYTGLLNLRKVIKNFL-------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      +|++++++|.+++....       ......+..+++.||.|||++|++|+||+|+||+++.++                 
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999999987642       122233444999999999999999999999999999644                 


Q ss_pred             ---------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 ---------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 ---------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                           .....+|+||+|+++++|++|..||................                  
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~------------------  219 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ------------------  219 (258)
T ss_pred             ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC------------------
Confidence                                 01234789999999999999999997665433333322210                  


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                ....+...+.++.+++.+||..+|++|||+.++|+||||
T Consensus       220 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         220 ----------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence                      001123578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5e-36  Score=240.13  Aligned_cols=211  Identities=15%  Similarity=0.150  Sum_probs=162.1

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      |.....||+|+||.||++.... +  +..|++|.. .........+.+|+.+++.++|+||+++    ...+..+++|||
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~  100 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKH-T--GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF  100 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECC-C--CCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence            4556789999999999999876 5  778899873 2223334568899999999999999987    567889999999


Q ss_pred             cCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           79 TGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      +++++|.+++....  ......+..||+.||.|||++|++||||||+||+++.++                         
T Consensus       101 ~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~  180 (292)
T cd06658         101 LEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVG  180 (292)
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeec
Confidence            99999999875421  223333444999999999999999999999999998655                         


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 -------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                   .....+|+||+|+++++|++|..||...........+........                      
T Consensus       181 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------  238 (292)
T cd06658         181 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV----------------------  238 (292)
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc----------------------
Confidence                         012336799999999999999999986655443333222110000                      


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                          ......+..+.+++.+||..||.+|||++++++||||+...
T Consensus       239 ----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         239 ----KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             ----ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence                00134678999999999999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=3.9e-35  Score=231.17  Aligned_cols=201  Identities=16%  Similarity=0.131  Sum_probs=156.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|++|.||+|.+..    ...+++|...........+.+|+.+++.++|+|++++   ...+..+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~----~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   81 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNG----TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEF   81 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcC----CceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEc
Confidence            579999999999999999998866    3357888744334445678899999999999999988   445678999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee------------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK------------------  135 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~------------------  135 (246)
                      +++++|.+++.......+     ..+..|++.||.|||++|++||||||+||+++.++ ..+                  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~-~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05069          82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL-VCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC-eEEECCCccceEccCCccccc
Confidence            999999999975432222     23344999999999999999999999999998665 111                  


Q ss_pred             ----------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          136 ----------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       136 ----------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                            .+|+||+|+++++|++ |..||.+....+....+......                  
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------------  222 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM------------------  222 (260)
T ss_pred             CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------------
Confidence                                  2569999999999999 89999876554444333221000                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                ..+...+..+.+++++||..||.+|||++++++
T Consensus       223 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         223 ----------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             ----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                      011356789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.8e-35  Score=233.18  Aligned_cols=204  Identities=20%  Similarity=0.297  Sum_probs=157.6

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||.|++|.||+|+... +  +..+++|....    .......+.+|+.+++.++||||+++    .+++..++++||+++
T Consensus         1 lg~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (262)
T cd05572           1 LGVGGFGRVELVKVKS-K--NRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLG   77 (262)
T ss_pred             CCCCCceEEEEEEECC-C--CcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCC
Confidence            6999999999999976 5  77888998322    22345678999999999999999998    567889999999999


Q ss_pred             ccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------------
Q 036362           82 LNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------------  131 (246)
                      ++|.+++.+...   ........|++.||.|||++|++|+||+|+||+++.++                           
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence            999999976422   12222334999999999999999999999999998665                           


Q ss_pred             -Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcc--hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcc
Q 036362          132 -YTV---------KIARLISVGCIFAEMVIQEPLSEDASE--SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPK  199 (246)
Q Consensus       132 -~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (246)
                       .+|         ..+|+||+|+++++|++|..||.....  ......+......+                        
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------  213 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL------------------------  213 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC------------------------
Confidence             011         125799999999999999999987652  22222222100000                        


Q ss_pred             hhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          200 DLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       200 ~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                         ..+...++++.+++.+||..||.+|||     ++|+++||||+++.
T Consensus       214 ---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  259 (262)
T cd05572         214 ---EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFD  259 (262)
T ss_pred             ---CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCC
Confidence               011345789999999999999999999     99999999999874

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.1e-36  Score=240.54  Aligned_cols=210  Identities=24%  Similarity=0.305  Sum_probs=161.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +.|++.+.||+|+||.||+|.+.. +  +..||+|...  ........+.+|+.+++.++|+||+++    ...+..++|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNR-T--KEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII   80 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcC-C--CeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence            358889999999999999999876 5  6788999732  122234578899999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee-------------------
Q 036362           76 FEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV-------------------  134 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~-------------------  134 (246)
                      +||+++++|.+++....  .........|++.||.|||++|++|+||+|+||+++.++ ..                   
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~-~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06642          81 MEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             EEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC-CEEEccccccccccCcchhhh
Confidence            99999999999886532  222223334999999999999999999999999998655 11                   


Q ss_pred             --------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          135 --------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       135 --------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                          ..+|+||+||++++|++|..|+...........+..  +.+                   
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~-------------------  218 (277)
T cd06642         160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK--NSP-------------------  218 (277)
T ss_pred             cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhc--CCC-------------------
Confidence                                135699999999999999999875443322211111  000                   


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                             .......+.++.+++.+||..+|.+|||+.++++||||....
T Consensus       219 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06642         219 -------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT  260 (277)
T ss_pred             -------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence                   001134678899999999999999999999999999998643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=2.4e-35  Score=232.57  Aligned_cols=209  Identities=21%  Similarity=0.320  Sum_probs=161.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---CcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|.+.+.||+|+||.||++.... +  +..+++|.......   ....+.+|+.+++.++|+||+++    ...+..+++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLD-T--GELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIF   77 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECC-C--CcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEE
Confidence            68999999999999999999876 5  77888888332222   56788999999999999999988    557889999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      +||+++++|.+++....   ......++.|++.||.|||++|++|+||+|+||+++.++                     
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~  157 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG  157 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence            99999999999987642   222233444999999999999999999999999998654                     


Q ss_pred             C------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 Y------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 ~------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                      .                        ....+|+||+|++++++++|..||............... +.+..          
T Consensus       158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~----------  226 (264)
T cd06626         158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPP----------  226 (264)
T ss_pred             ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCC----------
Confidence            0                        122368999999999999999999765432222111111 11000          


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                           .+         ....+++.+.+|+.+||..||.+|||+.|++.|||+
T Consensus       227 -----~~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         227 -----IP---------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             -----CC---------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                 00         012458899999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=2e-35  Score=235.49  Aligned_cols=211  Identities=18%  Similarity=0.249  Sum_probs=157.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcc-cccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISP-LKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~-l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||++.+.. +  ++.||+|.....  ......+..|+.. ++.++||||+++    ...+..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~l   77 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVP-T--GTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWI   77 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcC-C--CcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEE
Confidence            579999999999999999999987 6  888999973222  1223455566665 566789999997    55678999


Q ss_pred             EEeccCcccHHHHHhhhc--ccccch-----HHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCC---------------
Q 036362           75 IFEYTGLLNLRKVIKNFL--DIINNP-----KTAKILRVLSYYHSN-RCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~--~~~~~~-----~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      +|||++ ++|.+++....  ...+++     +..|++.||.|||++ +++||||||+||+++.++               
T Consensus        78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            999999 88988875421  122333     334999999999997 999999999999998655               


Q ss_pred             -------------Cee-------------eEEEeehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 -------------YTV-------------KIARLISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 -------------~~~-------------~~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                   .+|             ..+|+||+||++++|++|..||..... .........  +....       
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~-------  227 (283)
T cd06617         157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSPQ-------  227 (283)
T ss_pred             ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCCCC-------
Confidence                         011             236899999999999999999865332 222222211  00000       


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                              .          ....+++++.+|+.+||..||..|||+.++++||||....
T Consensus       228 --------~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         228 --------L----------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             --------C----------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence                    0          0124688999999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=7.9e-36  Score=240.18  Aligned_cols=207  Identities=15%  Similarity=0.131  Sum_probs=153.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      +++|++.+.||+|+||.||+|.+.. +.....+++|...  ........+.+|+.++.++ +|+||+++    ...+..+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEcc-CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            3689999999999999999999876 3111234565522  1222345678899999999 89999987    5667899


Q ss_pred             EEEeccCcccHHHHHhhhcc-------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---  131 (246)
                      ++|||+++++|.+++.+...                   .....+..|++.||+|||++|++||||||+|||++.++   
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k  164 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK  164 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence            99999999999999864321                   11222344999999999999999999999999998654   


Q ss_pred             ----------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCC
Q 036362          132 ----------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPS  176 (246)
Q Consensus       132 ----------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~  176 (246)
                                                        .....+|+|||||++++|++ |..||...+..+....+...   ..
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~---~~  241 (303)
T cd05088         165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR  241 (303)
T ss_pred             eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC---Cc
Confidence                                              01234689999999999998 99999765544333222110   00


Q ss_pred             cCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .                         ..+...++++.+|+.+||..+|+.|||+++++++
T Consensus       242 ~-------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         242 L-------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             C-------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            0                         0013467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.2e-35  Score=232.23  Aligned_cols=208  Identities=21%  Similarity=0.310  Sum_probs=158.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---C---CCcchhhhhhcccccCCCCceEEe----c--CC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---D---GVPISILTKISPLKEMDYPLIFRK----E--ND   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~---~~~~~~~~E~~~l~~l~~~~i~~~----~--~~   69 (246)
                      .+|++.+.||+|+||.||.+.+.. +  +..|++|.....   .   .....+.+|+.+++.++||||+++    .  ..
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~-~--~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   78 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDAD-T--GRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME   78 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcC-C--CcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC
Confidence            689999999999999999999877 5  778889872211   1   123467889999999999999997    1  23


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      ..++++|||+++++|.+++.+..   .........|++.||.|||++|++|+||||+||+++.++               
T Consensus        79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~  158 (265)
T cd06652          79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT  158 (265)
T ss_pred             ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence            57889999999999999986532   122233444999999999999999999999999998655               


Q ss_pred             --------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 --------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 --------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                .....+|+|||||++++|++|+.||.............   ..+..        
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~--------  227 (265)
T cd06652         159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQPTN--------  227 (265)
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCCCC--------
Confidence                                      00122579999999999999999997654333322211   11110        


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                      ...++..+..+.+++++|+ .+|..|||++|+++|||+.
T Consensus       228 ----------------~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         228 ----------------PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFVH  265 (265)
T ss_pred             ----------------CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence                            0012456788999999999 5999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.5e-35  Score=231.70  Aligned_cols=202  Identities=16%  Similarity=0.137  Sum_probs=156.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.++||+|+||.||+|++.. +   ..+++|...........+.+|+.+++.++|+||+++   ......+++|||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~-~---~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~   81 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNG-T---TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY   81 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecC-C---ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEc
Confidence            579999999999999999998866 2   358888844434445678999999999999999987   445668999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---------------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---------------------  132 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---------------------  132 (246)
                      +++++|.+++.+.....+     .....|++.||.|||++|++||||||+||+++.++.                     
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~  161 (262)
T cd05071          82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  161 (262)
T ss_pred             CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccccc
Confidence            999999999975322222     233449999999999999999999999999986650                     


Q ss_pred             ------------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          133 ------------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       133 ------------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                        ....+|+||+||+++++++ |..||...........+...  .+.                 
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~--~~~-----------------  222 (262)
T cd05071         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG--YRM-----------------  222 (262)
T ss_pred             CCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC--CCC-----------------
Confidence                              0113679999999999999 88888766554433333221  000                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                               .....+++.+.+++.+|+..||+.|||+.++++
T Consensus       223 ---------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         223 ---------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             ---------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                     001356889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.4e-35  Score=245.12  Aligned_cols=207  Identities=14%  Similarity=0.116  Sum_probs=153.4

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccC--CCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADII--PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.++||+|+||.||+|++...  ......||+|+...  .......+.+|+.+++.+ +||||+++    ......
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            4799999999999999999975210  11155788998322  122345788999999999 89999998    567789


Q ss_pred             EEEEeccCcccHHHHHhhhccc----------------------------------------------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI----------------------------------------------------------   94 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~----------------------------------------------------------   94 (246)
                      ++||||+++|+|.+++......                                                          
T Consensus       115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (375)
T cd05104         115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY  194 (375)
T ss_pred             eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence            9999999999999998642110                                                          


Q ss_pred             --------------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee--------------------
Q 036362           95 --------------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV--------------------  134 (246)
Q Consensus        95 --------------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~--------------------  134 (246)
                                          ....+..||+.||.|||++||+||||||+|||++.++ ..                    
T Consensus       195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~~~~  273 (375)
T cd05104         195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIRNDSNYVVK  273 (375)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC-cEEEecCccceeccCccccccc
Confidence                                0112334999999999999999999999999998654 11                    


Q ss_pred             ---------------------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          135 ---------------------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       135 ---------------------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                           ..+|+|||||++++|++ |..||............... +..                 
T Consensus       274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~-----------------  335 (375)
T cd05104         274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-GYR-----------------  335 (375)
T ss_pred             CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-Ccc-----------------
Confidence                                 12569999999999997 88888765443333222221 000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                               ...+...+.++.+|+.+||..||++|||+.|+++.
T Consensus       336 ---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         336 ---------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             ---------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                     00012457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-35  Score=244.80  Aligned_cols=207  Identities=20%  Similarity=0.269  Sum_probs=162.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      +.|++...+|.|+|+.|..|.+.. +  .+..++|+....   .....+|+.++... +||||+++    .++.+.|+||
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~-t--~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSP-T--DQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             hhhccccccCCCCccceeeeeccc-c--ccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            578899999999999999999988 5  777888873322   45567788777666 69999998    6788999999


Q ss_pred             eccCcccHHHHHhhhccc--ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEe-cCC----------------------
Q 036362           77 EYTGLLNLRKVIKNFLDI--INNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN-LSD----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~--~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~-~~~----------------------  131 (246)
                      |.+.|+-+.+.+......  ....++++|+.|+.|||++|++|||+||+|||++ ..+                      
T Consensus       396 e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~  475 (612)
T KOG0603|consen  396 ELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPAL  475 (612)
T ss_pred             hhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccch
Confidence            999988887777554333  3334667999999999999999999999999994 444                      


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 -------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                   ...+.+|+||||+++|+|++|+.||.......   .+...++.+..                     
T Consensus       476 t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~---ei~~~i~~~~~---------------------  531 (612)
T KOG0603|consen  476 TLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI---EIHTRIQMPKF---------------------  531 (612)
T ss_pred             hhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH---HHHHhhcCCcc---------------------
Confidence                         12334669999999999999999998665542   22222232211                     


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                            ...+|+.++|||++||+.||.+||++.+++.||||-+-++
T Consensus       532 ------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t  571 (612)
T KOG0603|consen  532 ------SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPT  571 (612)
T ss_pred             ------ccccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCC
Confidence                  0468999999999999999999999999999999944433

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.5e-35  Score=237.88  Aligned_cols=210  Identities=18%  Similarity=0.224  Sum_probs=161.9

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      |+....||+|+||.||++.... +  +..|++|.. .........+.+|+.+++.++||||+++    ..++..++++||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKH-S--GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcC-C--CCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence            5556689999999999999876 5  778899883 2233345678899999999999999988    456889999999


Q ss_pred             cCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           79 TGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      +++++|.+++....  ......+..|++.||.|||++|++||||||+||+++.++                         
T Consensus       100 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~  179 (297)
T cd06659         100 LQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG  179 (297)
T ss_pred             CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceec
Confidence            99999998875521  223333444999999999999999999999999998665                         


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          132 -------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                   .....+|+||+||++++|++|..||...........+..   .+.. .                   
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~-~-------------------  236 (297)
T cd06659         180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPPP-K-------------------  236 (297)
T ss_pred             CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCCC-C-------------------
Confidence                         011225799999999999999999976655444332221   1100 0                   


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                         .......++.+.+++++||..||.+|||+.++++||||.+.
T Consensus       237 ---~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         237 ---LKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             ---ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence               00113567899999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2.3e-35  Score=232.47  Aligned_cols=202  Identities=13%  Similarity=0.106  Sum_probs=158.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC-CcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-VPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.++||.|+||.||+|.+..    +..+++|....... ....+.+|+.+++.++|+||+++    ......+++|
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~----~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN----RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC----CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            479999999999999999999876    56788888333322 45678999999999999999987    5667899999


Q ss_pred             eccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ||+++++|.+++.......+.     .+..|++.||.|||++|++||||||+||+++.++                    
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence            999999999999764322222     2334999999999999999999999999998665                    


Q ss_pred             ------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                        .....+|+||||+++++|++ |..||...........+......+                 
T Consensus       162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------  224 (261)
T cd05148         162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP-----------------  224 (261)
T ss_pred             cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC-----------------
Confidence                              00113579999999999998 899998766544444333211100                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                 .+...++++.+++.+||..||..|||+.++++
T Consensus       225 -----------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         225 -----------CPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             -----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                       01467889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1.6e-35  Score=235.48  Aligned_cols=206  Identities=21%  Similarity=0.366  Sum_probs=164.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      ++|.+.+.||+|+||.||++.... +  ++.+++|+...    .......+.+|..+++.++ |+||+++    ...+..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~   77 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKE-T--NKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENL   77 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcC-C--CCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceE
Confidence            579999999999999999999976 5  77889998322    2233467888999999998 9999998    567899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-----------------  132 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-----------------  132 (246)
                      +++||++++++|.+++.+..   ......+..|++.||.|||++|++|+||+|+||+++.++.                 
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          78 YFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence            99999998899999997653   1222333449999999999999999999999999986540                 


Q ss_pred             -----------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh
Q 036362          133 -----------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRL  171 (246)
Q Consensus       133 -----------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  171 (246)
                                                               ....+|+||+|++++++++|..||........+..+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  237 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL  237 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence                                                     112377999999999999999999877654433333221


Q ss_pred             hCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH----HHHhcCCCC
Q 036362          172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV----NDALNHHYY  239 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~----~e~l~h~~~  239 (246)
                      ..                             ..+..+++.+.+|+++||+.||.+|||+    +++++||||
T Consensus       238 ~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         238 EY-----------------------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CC-----------------------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            00                             0113568899999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.2e-35  Score=236.75  Aligned_cols=212  Identities=15%  Similarity=0.138  Sum_probs=152.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc-------------cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE-------------NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~-------------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~   66 (246)
                      ++|++.++||+|+||.||+|.+..+.             ..+..||+|.....  ......+.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            58999999999999999999864311             01346888873221  2223468899999999999999998


Q ss_pred             ----cCCceEEEEEeccCcccHHHHHhhhccc----------------------ccchHHHHHHHHHHHHhhCceeeccC
Q 036362           67 ----ENDKLVYQIFEYTGLLNLRKVIKNFLDI----------------------INNPKTAKILRVLSYYHSNRCLHGRL  120 (246)
Q Consensus        67 ----~~~~~~~lv~e~~~~~~L~~~~~~~~~~----------------------~~~~~~~qil~~L~~lH~~~i~H~Di  120 (246)
                          ...+..+++|||+++++|.+++......                      ....+..||+.||.|||++||+||||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl  164 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL  164 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence                4567899999999999999998653210                      11234449999999999999999999


Q ss_pred             CCCCeEEecCC-------------------------------C---------eeeEEEeehhhHHHHHHhh--CCCCCCC
Q 036362          121 NPYQALINLSD-------------------------------Y---------TVKIARLISVGCIFAEMVI--QEPLSED  158 (246)
Q Consensus       121 kp~Nil~~~~~-------------------------------~---------~~~~~Di~slG~i~~~l~~--g~~~~~~  158 (246)
                      ||+|||++.++                               .         ....+|+|||||++++|++  +..||..
T Consensus       165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  244 (304)
T cd05096         165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE  244 (304)
T ss_pred             chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence            99999998765                               0         0112579999999999987  4567766


Q ss_pred             CcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          159 ASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                      ...................                     ......++.+++.+.+|+.+||..||.+|||+.++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         245 LTDEQVIENAGEFFRDQGR---------------------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             CCHHHHHHHHHHHhhhccc---------------------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            5443333322221110000                     000001245788999999999999999999999994

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.1e-35  Score=235.42  Aligned_cols=208  Identities=16%  Similarity=0.120  Sum_probs=157.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|......  .....+++|.....  ......+.+|+.+++.++||||+++    ...+..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            368999999999999999999876511  12356888873221  2224567899999999999999998    456789


Q ss_pred             EEEEeccCcccHHHHHhhhcc--------------ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD--------------IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~--------------~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--  131 (246)
                      +++|||+++++|.+++.....              ..+     ..+..|++.||.|||++|++||||||+||+++.++  
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcE
Confidence            999999999999999975421              111     12444999999999999999999999999998665  


Q ss_pred             -----------------------------Ceee---------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhh
Q 036362          132 -----------------------------YTVK---------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       132 -----------------------------~~~~---------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~  172 (246)
                                                   .+|+         .+|+|||||++++|++ |..||.+....+....+... 
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-  242 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-  242 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence                                         0011         2579999999999997 99998876554433332221 


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                       ..                          ...+..+++++.+|+.+||+.||..|||+.|++++
T Consensus       243 -~~--------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         243 -QL--------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             -Cc--------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             00                          00124678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-35  Score=237.85  Aligned_cols=125  Identities=22%  Similarity=0.246  Sum_probs=107.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----C---CceEEe-------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----Y---PLIFRK-------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----~---~~i~~~-------   66 (246)
                      .+|.+.++||.|-|++||+|.+.. .  ...||+|+..+.....+..+-||.+|+.++     +   ..||++       
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq-~--~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQ-N--KRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ceEEEEEeccccccceeEEEeecc-C--CeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            489999999999999999999977 5  789999997777777889999999999984     2   357877       


Q ss_pred             -cCCceEEEEEeccCcccHHHHHhhhcccccchHH-----HHHHHHHHHHhh-CceeeccCCCCCeEEecC
Q 036362           67 -ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT-----AKILRVLSYYHS-NRCLHGRLNPYQALINLS  130 (246)
Q Consensus        67 -~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~-----~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~  130 (246)
                       .++.++|||+|+++ .+|..+|......+++...     .|||.||.|||. .||||.||||+|||+-..
T Consensus       155 GpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence             56789999999999 9999999887666665544     499999999996 599999999999999766

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.8e-35  Score=230.25  Aligned_cols=202  Identities=13%  Similarity=0.159  Sum_probs=157.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|++|.||+|....    ...|++|...........+.+|+.+++.++|+||+++    ...+..+++||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~----~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNN----TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE   81 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecC----CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence            578999999999999999998755    4568888844334445678899999999999999987    56678999999


Q ss_pred             ccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           78 YTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      |+++++|.+++.......+     ..+..|++.||.|||++|++||||||+||+++.++                     
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05068          82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR  161 (261)
T ss_pred             cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence            9988999999865432222     23333999999999999999999999999998666                     


Q ss_pred             ---------Ceee---------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ---------YTVK---------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ---------~~~~---------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                               .+|+         .+|+||||+++++|++ |+.||.+.........+......+                 
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-----------------  224 (261)
T cd05068         162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP-----------------  224 (261)
T ss_pred             CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC-----------------
Confidence                     0122         3679999999999999 999998765544443333211000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                 .....++.+.+++.+||..||..||++.++++
T Consensus       225 -----------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         225 -----------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             -----------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                       01356789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.1e-35  Score=234.07  Aligned_cols=213  Identities=17%  Similarity=0.193  Sum_probs=163.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .|...+.||+|++|.||++.+.. +  +..+++|... ........+.+|+.+++.++|+||+++    ...+..++++|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e   96 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKS-T--GRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME   96 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECC-C--CCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence            45566799999999999999876 5  6778888722 222334568899999999999999998    45678999999


Q ss_pred             ccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           78 YTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      |+++++|.+++....  ......+..|++.||.|||++|++||||+|+||+++.++                        
T Consensus        97 ~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  176 (285)
T cd06648          97 FLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV  176 (285)
T ss_pred             ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence            999999999987621  122233455999999999999999999999999998765                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+|+++++|++|..||...+.......+...  .+..                    
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--~~~~--------------------  234 (285)
T cd06648         177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--LPPK--------------------  234 (285)
T ss_pred             CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc--CCCC--------------------
Confidence                          0112367999999999999999999765544333332221  0000                    


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                          .......+..+.+|+++||..||++|||+.++++||||++...
T Consensus       235 ----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         235 ----LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             ----CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence                0001346789999999999999999999999999999988643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=3.8e-35  Score=234.33  Aligned_cols=214  Identities=21%  Similarity=0.279  Sum_probs=166.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      +.|++.+.||+|++|.||.+.+.. .  +..+++|...........+.+|+..++.++|+||+++    ......++++|
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRA-T--GKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEcc-C--CcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            468889999999999999999976 4  6778898833322246678899999999999999987    55688999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+++++|.+++....    ......+..|++.||.|||++|++|+||+|+||+++.++                      
T Consensus        96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  175 (286)
T cd06614          96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS  175 (286)
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcc
Confidence            999999999997753    111222334999999999999999999999999998665                      


Q ss_pred             -------C---------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          132 -------Y---------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       132 -------~---------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                             .         ....+|+||+|+++++|++|..||...........+... +.+.                   
T Consensus       176 ~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-------------------  235 (286)
T cd06614         176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP-------------------  235 (286)
T ss_pred             ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC-------------------
Confidence                   0         012368999999999999999999865544333222220 1000                   


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                            ......++.++.+|+++||+.+|..|||+.++++||||++..+
T Consensus       236 ------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         236 ------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP  278 (286)
T ss_pred             ------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence                  0001346789999999999999999999999999999998543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.5e-35  Score=228.95  Aligned_cols=203  Identities=17%  Similarity=0.161  Sum_probs=159.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      .++|++.+.||+|+||.||+|....    ...+++|...........+.+|+.+++.++|+||+++    ......+++|
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~----~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNG----TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcC----CceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            3689999999999999999998765    4568888854444556789999999999999999998    4557899999


Q ss_pred             eccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-------------------  132 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-------------------  132 (246)
                      ||+++++|.+++.......+     ..+..|++.||.|||++|++|+||||+||+++.++.                   
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA  160 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence            99999999999976432222     233349999999999999999999999999987660                   


Q ss_pred             --------------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          133 --------------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       133 --------------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                          ....+|+||+|++++++++ |+.||.+.........+......+                
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------  224 (261)
T cd05034         161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP----------------  224 (261)
T ss_pred             hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------
Confidence                                0113579999999999998 999998766554444443311110                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  .....++++.+++.+||..+|.+|||++++++
T Consensus       225 ------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         225 ------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             ------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                        01345789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=9.9e-35  Score=228.84  Aligned_cols=203  Identities=14%  Similarity=0.122  Sum_probs=156.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEe
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFE   77 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e   77 (246)
                      .++|++.+.||+|+||.||++....    ...+++|...........+.+|+.+++.++|+||+++   ......+++||
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~----~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e   80 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNK----HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE   80 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecC----CccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEE
Confidence            3689999999999999999998655    4468888743333345678899999999999999998   33377899999


Q ss_pred             ccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           78 YTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      |+++++|.+++.+......     ..+..|++.||.|||++|++||||||+||+++.++                     
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  160 (260)
T cd05073          81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR  160 (260)
T ss_pred             eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence            9999999999976322222     22334999999999999999999999999998665                     


Q ss_pred             ------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                        .....+|+|||||+++++++ |..||...+.......+......                  
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------------------  222 (260)
T cd05073         161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM------------------  222 (260)
T ss_pred             cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC------------------
Confidence                              01124689999999999998 89999876554444333221100                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                ......+.++.+++.+||..||++||++.++++
T Consensus       223 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         223 ----------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             ----------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                      011456789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.8e-35  Score=231.90  Aligned_cols=206  Identities=18%  Similarity=0.225  Sum_probs=154.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc---c---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---D---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +|.+.+.||+|+||.||++++.. .  +..+++|+   .   .........+..|+.+++.++||||+++    ......
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKK-A--VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAF   77 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecC-C--CCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCce
Confidence            69999999999999999998876 3  33333333   1   1122334467789999999999999988    556779


Q ss_pred             EEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      ++++||+++++|.+++....  ...+     ..+..|++.||.|||++|++|+||||+||+++...              
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~  157 (260)
T cd08222          78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMG  157 (260)
T ss_pred             EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCC
Confidence            99999999999998885421  1122     33444999999999999999999999999997421              


Q ss_pred             -----------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 -----------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 -----------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                             .....+|+||+|+++++|++|..||...........+..   .+.+           
T Consensus       158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~-----------  223 (260)
T cd08222         158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE---GPTP-----------  223 (260)
T ss_pred             CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---CCCC-----------
Confidence                                   001136899999999999999999976544333222221   1100           


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                    ......+.++.+++.+||..||++||++.|+++||||
T Consensus       224 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         224 --------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             --------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence                          0113567899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.1e-35  Score=229.16  Aligned_cols=203  Identities=12%  Similarity=0.086  Sum_probs=157.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .+|++.+.||+|+||.||++.+..    ...+++|...........+.+|+.+++.++|+||+++    ...+..+++||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~----~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRG----KIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE   79 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecC----CccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence            478999999999999999998764    4568888844434445678899999999999999988    56678999999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+++++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                      
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence            9999999999865332    12223344999999999999999999999999998655                      


Q ss_pred             --------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 --------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 --------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                              .+|         ..+|+||||++++++++ |..||...........+......                   
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------  220 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL-------------------  220 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC-------------------
Confidence                    001         13679999999999998 88999765544433332221000                   


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                               ..+...++++.+++.+||..+|+.|||+.|+++.
T Consensus       221 ---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         221 ---------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             ---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                     0113568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3.7e-35  Score=242.52  Aligned_cols=206  Identities=12%  Similarity=0.130  Sum_probs=153.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+..+.  .....||+|.....  ......+.+|+.+++.+ +|+||+++    ...+..
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            46899999999999999999864411  11457899983322  22245688999999999 89999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhccc----------------------------------------------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI----------------------------------------------------------   94 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~----------------------------------------------------------   94 (246)
                      ++||||+++++|.+++......                                                          
T Consensus       118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (374)
T cd05106         118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS  197 (374)
T ss_pred             EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence            9999999999999998542110                                                          


Q ss_pred             ---------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee-------------------------
Q 036362           95 ---------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV-------------------------  134 (246)
Q Consensus        95 ---------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~-------------------------  134 (246)
                                     ....+..||+.||.|||++||+||||||+|||++.++ ..                         
T Consensus       198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~-~~kL~DfGla~~~~~~~~~~~~~~~~~  276 (374)
T cd05106         198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR-VAKICDFGLARDIMNDSNYVVKGNARL  276 (374)
T ss_pred             cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC-eEEEeeceeeeeccCCcceeeccCCCC
Confidence                           0112334999999999999999999999999998554 11                         


Q ss_pred             ----------------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          135 ----------------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       135 ----------------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                      ..+|+||+||++++|++ |..||............... +...                     
T Consensus       277 ~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~-~~~~---------------------  334 (374)
T cd05106         277 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR-GYQM---------------------  334 (374)
T ss_pred             ccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHc-ccCc---------------------
Confidence                            13569999999999997 99999865543333222221 0000                     


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                           ..+...++++.+++.+||..||.+|||+.++++
T Consensus       335 -----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         335 -----SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             -----cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 001245789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.4e-35  Score=232.86  Aligned_cols=205  Identities=13%  Similarity=0.094  Sum_probs=153.1

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----cC------Cc
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----EN------DK   70 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~~------~~   70 (246)
                      |++.+.||+|+||.||.|....+......+|+|.....   ......+.+|+..++.++|+||+++    ..      ..
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            67899999999999999987652323567899973322   1223578899999999999999987    11      13


Q ss_pred             eEEEEEeccCcccHHHHHhhhc----ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL----DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~----~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------  131 (246)
                      ..++++||+++++|..++....    ...++     .+..|++.||.|||++|++||||||+||+++.++          
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence            4799999999999998884421    11222     2344999999999999999999999999998765          


Q ss_pred             ------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          132 ------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       132 ------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                    .....+|+||+||++++|++ |..||.+.........+...  ...    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~~~----  234 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG--NRL----  234 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--CCC----
Confidence                                          01123779999999999998 88899776554433333221  000    


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                            ..+...++++.+++.+||..||.+|||+.|++.+
T Consensus       235 ----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         235 ----------------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             ----------------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                  0114578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=5.4e-35  Score=236.66  Aligned_cols=206  Identities=17%  Similarity=0.150  Sum_probs=153.8

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-chhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      .+|++.+.||+|+||.||+|.+..+.. ....||+|....  .......+.+|+.+++.++||||+++   ......+++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            579999999999999999998765221 123478888322  22335678889999999999999998   334567899


Q ss_pred             EeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      ++|+++|+|.+++......    .......||+.||+|||++||+||||||+|||++.++ ..+                
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~  165 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGADEKE  165 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC-cEEEccccccccccCCCcc
Confidence            9999999999998764321    1122334999999999999999999999999998655 112                


Q ss_pred             -------------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          136 -------------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       136 -------------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                               .+|+|||||+++++++ |..||.+...... ..+......+              
T Consensus       166 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~--------------  230 (316)
T cd05108         166 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERL--------------  230 (316)
T ss_pred             eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCC--------------
Confidence                                     2469999999999987 9999976544332 2222210000              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                   ..++.++.++.+++.+||..||..|||+.+++.+
T Consensus       231 -------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         231 -------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             -------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                         0013467889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=8.6e-35  Score=234.57  Aligned_cols=210  Identities=14%  Similarity=0.209  Sum_probs=159.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +.|++.+.||+|+||.||+|.... +  ++.|++|.....    ......+.+|+.+++.++||||+++    ...+..+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~   91 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVR-T--NEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW   91 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcC-C--CcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE
Confidence            468999999999999999999876 5  778889873211    1223468899999999999999998    5567899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +|+||++ +++.+++....    ......+..|++.||.|||++|++||||+|+||+++.++                  
T Consensus        92 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~  170 (307)
T cd06607          92 LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS  170 (307)
T ss_pred             EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence            9999999 78877765422    122222344999999999999999999999999998765                  


Q ss_pred             -------Ceee------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------YTVK------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------~~~~------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                             .+|+            .+|+||||+++++|++|..||...+.......+..  +.+..               
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~~---------------  233 (307)
T cd06607         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NDSPT---------------  233 (307)
T ss_pred             ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc--CCCCC---------------
Confidence                   1122            36899999999999999999976654433222211  00000               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                         .       ....+++++.+++.+||..||..|||+.+++.||||..-
T Consensus       234 ---~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         234 ---L-------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             ---C-------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence               0       012367889999999999999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-38  Score=237.71  Aligned_cols=212  Identities=19%  Similarity=0.245  Sum_probs=169.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      |.++++||+|+||.||+|.++. +  +..+|||.. ..+...+.+..||.++++.++++||++    .....+|+|||||
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~E-s--G~v~AIK~V-PV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRE-S--GHVLAIKKV-PVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhc-c--CcEEEEEec-CccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            6788999999999999999988 6  889999973 345567889999999999999999998    3456899999999


Q ss_pred             CcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------
Q 036362           80 GLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        80 ~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +.|+..+.+....    +..+.......+.||+|||...-+|||||..|||++.+|                        
T Consensus       111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI  190 (502)
T KOG0574|consen  111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI  190 (502)
T ss_pred             CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence            9999999986533    333444445899999999999999999999999999888                        


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    ...-.+|+||||++..||..|++||.+.-...   .++..-..|+                     
T Consensus       191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---AIFMIPT~PP---------------------  246 (502)
T KOG0574|consen  191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---AIFMIPTKPP---------------------  246 (502)
T ss_pred             cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---eeEeccCCCC---------------------
Confidence                          11122459999999999999999998654432   2222211221                     


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                       +.+. .+..+|.++.||+++||.++|+.|-||-++++|||+++.+.|
T Consensus       247 -PTF~-KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~  292 (502)
T KOG0574|consen  247 -PTFK-KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC  292 (502)
T ss_pred             -CCCC-ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence             1111 124578999999999999999999999999999999998765

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=4.2e-35  Score=233.71  Aligned_cols=207  Identities=17%  Similarity=0.103  Sum_probs=155.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccc-cchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~-~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++.+.||+|+||.||+|....+. ..+..+++|......  .....+.+|+.+++.++||||+++    ......+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            468999999999999999999863211 125678888733212  123468889999999999999988    5667899


Q ss_pred             EEEeccCcccHHHHHhhhcc--------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe
Q 036362           74 QIFEYTGLLNLRKVIKNFLD--------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT  133 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~--------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~  133 (246)
                      ++|||+++++|.+++.....                    .....+..|++.||.|||++|++||||||+||+++.++ .
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~-~  162 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL-H  162 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC-c
Confidence            99999999999999853211                    11122344999999999999999999999999998665 1


Q ss_pred             -----------------------------------------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHh
Q 036362          134 -----------------------------------------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRL  171 (246)
Q Consensus       134 -----------------------------------------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~  171 (246)
                                                               ...+|+|||||++++|++ |..||.+.........+...
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  242 (283)
T cd05090         163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR  242 (283)
T ss_pred             EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence                                                     113579999999999998 88898765543332222221


Q ss_pred             hCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                        ..                          ...+..+++.+.+++.+||..||.+||++.+++++
T Consensus       243 --~~--------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         243 --QL--------------------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             --Cc--------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence              00                          00114578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=4.1e-35  Score=235.39  Aligned_cols=207  Identities=14%  Similarity=0.117  Sum_probs=154.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      .++|++.+.||+|+||.||+|....+. ....+++|...  ........+.+|+.++.++ +||||+++    ......+
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           1 WEDIKFEDVIGEGNFGQVIRAMIKKDG-LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             CccceeeeeecCCCcceEEEEEecCCC-CcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence            368999999999999999999887622 11235666522  1222345688899999999 79999988    4566799


Q ss_pred             EEEeccCcccHHHHHhhhcc-------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---  131 (246)
                      +++||+++++|.+++.+...                   .....+..|++.||+|||++|++||||||+|||++.++   
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence            99999999999999965321                   11122344999999999999999999999999997654   


Q ss_pred             ----------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCC
Q 036362          132 ----------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPS  176 (246)
Q Consensus       132 ----------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~  176 (246)
                                                        .....+|+|||||++++|++ |..||...........+......  
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~--  237 (297)
T cd05089         160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM--  237 (297)
T ss_pred             ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC--
Confidence                                              01123669999999999997 99999876554443332221000  


Q ss_pred             cCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                                ..+..+++++.+|+.+||..||.+|||+.++++.
T Consensus       238 --------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         238 --------------------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             --------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                      0113578899999999999999999999999643

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=9e-35  Score=231.40  Aligned_cols=206  Identities=17%  Similarity=0.196  Sum_probs=149.2

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccc---cCCCCceEEe----cCCceEEEEEe
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLK---EMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~---~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .||+|+||.||++.+.. +  +..+|+|.....    ........+|..+++   ..+|++|+.+    ...+..++|||
T Consensus         1 ~lg~G~~g~Vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           1 IIGRGGFGEVYGCRKAD-T--GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             CcccCCCeEEEEEEECC-C--CcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence            48999999999999876 5  778899972211    111223445544333   3479999887    45678999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      |+++++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++                       
T Consensus        78 ~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (279)
T cd05633          78 LMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (279)
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence            999999998886532   223333445999999999999999999999999998655                       


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+||++++|++|..||.......... +.......                      
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~----------------------  214 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTV----------------------  214 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhhcC----------------------
Confidence                          01223579999999999999999997543221111 11100000                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                         ....+..+++++.+++++||..||++||     |++++++||||++++
T Consensus       215 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         215 ---NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             ---CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence               0011246789999999999999999999     699999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=5.2e-35  Score=232.73  Aligned_cols=206  Identities=16%  Similarity=0.133  Sum_probs=157.3

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|.+.+.||+|+||.||+|.....  ......+++|.......  ....+.+|+++++.++|+||+++    ......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            5799999999999999999987541  12256788998333222  24688999999999999999988    5567899


Q ss_pred             EEEeccCcccHHHHHhhhcc------------ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----
Q 036362           74 QIFEYTGLLNLRKVIKNFLD------------IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~------------~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----  131 (246)
                      ++|||+++++|.+++.....            ..+     .....|++.||.|||++|++||||||+||+++.++     
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~  164 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG  164 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence            99999999999999975421            111     22344999999999999999999999999997655     


Q ss_pred             --------------------------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCC
Q 036362          132 --------------------------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       132 --------------------------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                                                .+|         ..+|+||+||++++|++ |..||...........+..  +..
T Consensus       165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~--~~~  242 (280)
T cd05049         165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ--GRL  242 (280)
T ss_pred             CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCc
Confidence                                      011         12679999999999998 9999876655443333322  100


Q ss_pred             CcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          176 SEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .                          ......+..+.+++.+||..||..|||+.|+++
T Consensus       243 ~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         243 L--------------------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             C--------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            0                          001357889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.1e-34  Score=227.82  Aligned_cols=208  Identities=23%  Similarity=0.371  Sum_probs=161.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCC--ceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----END--KLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~--~~~~   73 (246)
                      +|++.+.||+|++|.||+|.+.. +  +..+++|......   .....+.+|+..+++++|+||+++    ...  ...+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKD-T--GELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECC-C--CcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEE
Confidence            58899999999999999999986 5  7788888832222   346788899999999999999998    344  7899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------C--
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------Y--  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------~--  132 (246)
                      +++|++++++|.+++.+..   .........|++.||.|||++|++|+||+|+||+++.++                .  
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence            9999999899999987653   222233444999999999999999999999999999755                0  


Q ss_pred             ----------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          133 ----------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       133 ----------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                            ....+|+||+|++++++++|..||.......  ........                 
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~-----------------  218 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM--AALYKIGS-----------------  218 (260)
T ss_pred             ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHhccc-----------------
Confidence                                  1234679999999999999999998665211  11111100                 


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                             .......+...++.+.+|+.+||+.||.+|||+.|+++||||
T Consensus       219 -------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         219 -------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             -------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence                   000011124568999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-34  Score=225.79  Aligned_cols=206  Identities=24%  Similarity=0.355  Sum_probs=162.3

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.+.||+|++|.||++.+.. .  ++.+++|......   .....+.+|+++++.++|+|++++    .+.+..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLE-T--GDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYII   77 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcC-C--CcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEE
Confidence            58999999999999999999876 5  6788898833322   345678999999999999999987    556889999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      +|++++++|.+++....   .......+.|++.||.|||++|++||||||+||+++.++                     
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  157 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA  157 (254)
T ss_pred             EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence            99999999999987642   222233444999999999999999999999999999755                     


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                       .....+|+||+|+++++|++|..||...............  .                    
T Consensus       158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~--------------------  215 (254)
T cd06627         158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD--D--------------------  215 (254)
T ss_pred             ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--C--------------------
Confidence                             0012367999999999999999999765543333222210  0                    


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                            .......+++.+.+++.+||..+|++|||+.+++.||||
T Consensus       216 ------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         216 ------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             ------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence                  001124678899999999999999999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=2.3e-34  Score=225.05  Aligned_cols=207  Identities=21%  Similarity=0.283  Sum_probs=161.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-CCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      +|++.+.||+|++|.||++.+.. +  ++.+++|...... .....+.+|+..++.++|++++++    ......++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKR-T--GKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECC-C--CcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence            58999999999999999999976 5  7788888833222 356789999999999999999988    45678999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |+++++|.+++....    ......+..|++.||.+||++|++||||+|+||+++.++                      
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  157 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTM  157 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccce
Confidence            999999999987642    222233344999999999999999999999999998665                      


Q ss_pred             ---------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 ---------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 ---------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                                     .....+|+||+|+++++|++|..||...+.......... ...+..                   
T Consensus       158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~-------------------  217 (253)
T cd05122         158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGL-------------------  217 (253)
T ss_pred             ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCc-------------------
Confidence                           002236799999999999999999986644333322222 010000                   


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCC
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY  238 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~  238 (246)
                      .      ....++..+.+++++||+.||++|||+.|+++|||
T Consensus       218 ~------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         218 R------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             C------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            0      00124789999999999999999999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.1e-34  Score=229.24  Aligned_cols=207  Identities=16%  Similarity=0.241  Sum_probs=156.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|++.. +  +..||+|...    ........+.+|+.+++.++||||+++    ...+..
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCLL-D--RKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNEL   77 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEeC-C--CCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeE
Confidence            5789999999999999999999877 5  7788898621    122234467889999999999999998    456789


Q ss_pred             EEEEeccCcccHHHHHhhhcc--cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD--IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~--~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      ++++||+++++|.+++.....  ..+.     .+..|++.||.|||++|++||||||+||+++.++              
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            999999999999988854221  1122     3334999999999999999999999999998765              


Q ss_pred             ---------------Ceee---------EEEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 ---------------YTVK---------IARLISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 ---------------~~~~---------~~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                     .+|+         .+|+||+|+++++|++|..||...... ..........+.++.         
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------  228 (267)
T cd08228         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL---------  228 (267)
T ss_pred             chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC---------
Confidence                           0111         257999999999999999998654321 122222221111110         


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                       .....+..+.+++.+||..+|++|||+.++++.
T Consensus       229 -----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         229 -----------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             -----------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence                             012467889999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=228.20  Aligned_cols=209  Identities=16%  Similarity=0.272  Sum_probs=153.6

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhhccc-ccCCCCceEEe----cCCceEEEEEe
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKISPL-KEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l-~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++.||+|+||.||+|.+.. .  ++.||+|......    ........|..++ ...+|+|++++    ..++..++++|
T Consensus         1 ~~~l~~g~~~~v~~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (260)
T cd05611           1 LKPISKGAFGSVYLAKKRS-T--GDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME   77 (260)
T ss_pred             CccCCcCCCeeEEEEEecC-C--CCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence            3579999999999999977 5  7789999832211    1122334444443 44589999998    56678999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      |+++++|.+++....   ......+..|++.||.|||++|++||||+|+||+++.++                       
T Consensus        78 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (260)
T cd05611          78 YLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTP  157 (260)
T ss_pred             ccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCc
Confidence            999999999987542   222333444999999999999999999999999998654                       


Q ss_pred             -----------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          132 -----------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       132 -----------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                                 .....+|+||+|+++++|++|..||...+.......+...  ..                   .+.   
T Consensus       158 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~-------------------~~~---  213 (260)
T cd05611         158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR--RI-------------------NWP---  213 (260)
T ss_pred             CccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--cc-------------------CCC---
Confidence                       0122468999999999999999999866554433332221  00                   000   


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCH---HHHhcCCCCcCCC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITV---NDALNHHYYRDVV  243 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~---~e~l~h~~~~~~~  243 (246)
                       ......+++.+.+++.+||+.||+.|||+   +|+++||||+++.
T Consensus       214 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         214 -EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             -CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence             00113578999999999999999999955   7999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=5.7e-35  Score=232.25  Aligned_cols=207  Identities=16%  Similarity=0.177  Sum_probs=154.8

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||.|.+...  ...+..+|+|......  .....+.+|+.+++.++|+||+++    ..+...+
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~   85 (277)
T cd05062           6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   85 (277)
T ss_pred             HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence            5799999999999999999986531  1124578888732211  223457889999999999999998    5667899


Q ss_pred             EEEeccCcccHHHHHhhhccc-------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI-------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~-------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------  132 (246)
                      +||||+++++|.+++......             ....+..|++.||.|||++|++||||||+||+++.++.        
T Consensus        86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~  165 (277)
T cd05062          86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM  165 (277)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCC
Confidence            999999999999998653211             11223349999999999999999999999999996550        


Q ss_pred             --------------------------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          133 --------------------------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       133 --------------------------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                      ....+|+|||||++++|++ |..||...........+... +.+    
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~----  240 (277)
T cd05062         166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-GLL----  240 (277)
T ss_pred             ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC----
Confidence                                            0112579999999999998 78888766544333322221 000    


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                             ......++.+.+++.+||..||+.|||+.|++++
T Consensus       241 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         241 -----------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             -----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                   0113567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-36  Score=265.91  Aligned_cols=205  Identities=20%  Similarity=0.325  Sum_probs=165.1

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .-...||.|.||.||.|.+.. +  +...|+|-   ..........+.+|..++..++|||+|++    ..++..+|.||
T Consensus      1238 qrg~~Ig~G~fG~VYtavN~~-t--GellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLD-T--GELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred             ccccccCCcceeeeEEeecCC-c--cchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence            445679999999999999988 6  77777776   33345567788999999999999999998    56788999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------------  136 (246)
                      ||++|+|.+.+....   +...+.++.|++.||.|||++|||||||||+||+++..| ..|.                  
T Consensus      1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g-~iK~~DFGsa~ki~~~~~~~~~ 1393 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG-LIKYGDFGSAVKIKNNAQTMPG 1393 (1509)
T ss_pred             HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC-cEEeecccceeEecCchhcCCH
Confidence            999999999997642   445566666999999999999999999999999999777 2333                  


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  .||||+||+..||.+|+.||...+. ......+... ..|            
T Consensus      1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g-h~P------------ 1460 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG-HKP------------ 1460 (1509)
T ss_pred             HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc-CCC------------
Confidence                                        4499999999999999999975443 3332222221 111            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                     +.+..+|++.+|||++||..||+.|+++.|+++|.|-+.
T Consensus      1461 ---------------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1461 ---------------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             ---------------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence                           112468999999999999999999999999999998664

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=252.14  Aligned_cols=198  Identities=18%  Similarity=0.229  Sum_probs=158.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCC-CCceEEe----------cC-C
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMD-YPLIFRK----------EN-D   69 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----------~~-~   69 (246)
                      +++|.+.|.+|||+.||+|.... .  +..||+|+ ....+.....+.+||++|+.|. |+|||.+          .. .
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~-~--~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVK-G--GKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecC-C--CceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            46899999999999999999987 4  48899998 3334555678899999999996 9999998          11 3


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc-----ccccchHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCCeeeEEE----
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL-----DIINNPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDYTVKIAR----  138 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~~~~~~D----  138 (246)
                      ..+.|+||||.||.|-+++++.-     +..+-.++.|+++|+.+||..+  |||||||-||||++.+| ..|++|    
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g-~~KLCDFGSa  193 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG-NYKLCDFGSA  193 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC-CEEeCccccc
Confidence            57889999999999999997543     3334445559999999999987  99999999999999877 444444    


Q ss_pred             -----------------------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh
Q 036362          139 -----------------------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRL  171 (246)
Q Consensus       139 -----------------------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  171 (246)
                                                                     ||+|||++|.|.....||........+.     
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIln-----  268 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILN-----  268 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEe-----
Confidence                                                           9999999999999999998764332111     


Q ss_pred             hCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                +...++++                +..+..+.+||+.||+.||.+||++.+++.
T Consensus       269 ----------g~Y~~P~~----------------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  269 ----------GNYSFPPF----------------PNYSDRLKDLIRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             ----------ccccCCCC----------------ccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence                      11111111                578899999999999999999999999874

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.8e-34  Score=230.87  Aligned_cols=216  Identities=14%  Similarity=0.213  Sum_probs=161.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC-----CCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      .|++.+.||+|+||.||.|+.......+..||+|....     .......+.+|+.+++.+ +|++|+++    ..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            48999999999999999998753122277889997321     222346678899999999 58999987    556788


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++|+||+++++|.+++....   ...+.....|++.||.|||++|++||||||+||+++.++                  
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            99999999999999986532   222233333999999999999999999999999998665                  


Q ss_pred             ------------C-----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 ------------Y-----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 ------------~-----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                  .           ....+|+||+|+++++|++|..||...........+........+           
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------  229 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP-----------  229 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC-----------
Confidence                        0           013478999999999999999998643322111122221100000           


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                    .....+++.+.+++++||..||..||     ++.++++||||+.++
T Consensus       230 --------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         230 --------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             --------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence                          01135788999999999999999997     899999999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.1e-34  Score=230.62  Aligned_cols=207  Identities=11%  Similarity=0.073  Sum_probs=155.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|.+.+.||+|++|.||+|.+....  .....+++|.....  ......+.+|+.+++.++|+||+++    ...+..+
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            46899999999999999999886410  02557788873222  2223468889999999999999998    4556789


Q ss_pred             EEEeccCcccHHHHHhhhcc-----cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-----IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-----------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-----~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-----------  132 (246)
                      ++|||+++++|.+++.....     ..+.     .+..||+.||.|||++|++||||||+||+++.++.           
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCcc
Confidence            99999999999999865431     1122     23349999999999999999999999999975430           


Q ss_pred             --------------------------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          133 --------------------------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       133 --------------------------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                      ....+|+|||||++++|++ |..||...+.......+... +.+    
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~----  240 (277)
T cd05036         166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-GRL----  240 (277)
T ss_pred             ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC----
Confidence                                            1123679999999999996 99999876544333222221 000    


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                             ..+..++..+.+++.+||..||+.|||+.++++|
T Consensus       241 -----------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         241 -----------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             -----------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                                   0124568899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.5e-34  Score=231.61  Aligned_cols=207  Identities=14%  Similarity=0.168  Sum_probs=155.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccC--CCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADII--PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||++......  .....+++|....  .......+.+|+.+++.+ +|+||+++    ...+..
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   91 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL   91 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence            57899999999999999999876411  1245788887322  122234678899999999 79999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhc--------------ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--------------DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--------------~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--  131 (246)
                      +++|||+++++|.+++....              ...+.     .+..|++.||.|||++||+||||||+||+++.++  
T Consensus        92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~  171 (293)
T cd05053          92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVM  171 (293)
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeE
Confidence            99999999999999986531              11122     2344999999999999999999999999998666  


Q ss_pred             -----------------------------Ceee---------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhh
Q 036362          132 -----------------------------YTVK---------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       132 -----------------------------~~~~---------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~  172 (246)
                                                   .+|+         .+|+|||||+++++++ |..||...........+....
T Consensus       172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  251 (293)
T cd05053         172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY  251 (293)
T ss_pred             EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC
Confidence                                         0112         2579999999999997 888987665444333322210


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ..                            ..+...+.++.+|+.+||..||..|||+.|++++
T Consensus       252 ~~----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         252 RM----------------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             cC----------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            00                            0113567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.2e-34  Score=228.56  Aligned_cols=204  Identities=22%  Similarity=0.358  Sum_probs=159.0

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||+|+||.||++.+.. +  ++.+++|.....    ......+.+|+++++.++|+||+++    ..+...++++||+++
T Consensus         1 lg~g~~~~vy~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (265)
T cd05579           1 ISKGAYGRVFLAKKKS-T--GDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPG   77 (265)
T ss_pred             CCCCCceEEEEEEECC-C--CCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCC
Confidence            6899999999999976 5  778999983222    1345678889999999999999988    567889999999999


Q ss_pred             ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------------------
Q 036362           82 LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------------------  132 (246)
Q Consensus        82 ~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------------------  132 (246)
                      ++|.+++.+..   ......+..|++.||.|||++|++||||+|+||+++.++.                          
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          78 GDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence            99999987642   1222234449999999999999999999999999986650                          


Q ss_pred             --------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          133 --------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       133 --------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                          ....+|+||+|++++++++|..||...........+..  +...   +            
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~---~------------  220 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GKIE---W------------  220 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcC---C------------
Confidence                                01246899999999999999999987665444333322  1100   0            


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH---HHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV---NDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~---~e~l~h~~~~~~~  243 (246)
                          . .     ....++.+.+|+++||+.+|++|||+   .++++||||++++
T Consensus       221 ----~-~-----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         221 ----P-E-----DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             ----C-c-----cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence                0 0     01248899999999999999999999   9999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-34  Score=227.87  Aligned_cols=207  Identities=21%  Similarity=0.309  Sum_probs=159.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC------CCCCcchhhhhhcccccCCCCceEEe------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII------PDGVPISILTKISPLKEMDYPLIFRK------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~   69 (246)
                      .+|++.+.||+|+||.||+|++.. +  +..+++|....      .......+.+|+.+++.++|+||+++      ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   78 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDAD-T--GRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE   78 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcC-C--CCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC
Confidence            479999999999999999999877 5  77889987211      11223477889999999999999987      234


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------  132 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------  132 (246)
                      +.+++++||+++++|.+++....   ......+..|++.||.|||++|++|+||||+||+++.++.              
T Consensus        79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence            57889999999999999986532   2222334449999999999999999999999999986550              


Q ss_pred             ---------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          133 ---------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       133 ---------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                 ....+|+|||||+++++++|+.||..........   .....+..        
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~--------  227 (264)
T cd06653         159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF---KIATQPTK--------  227 (264)
T ss_pred             ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH---HHHcCCCC--------
Confidence                                       1123589999999999999999997654433332   22222111        


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                      ...+..+++++.+++++||. +|.+|||+.++++|||.
T Consensus       228 ----------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         228 ----------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             ----------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence                            01125678999999999998 67999999999999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=3.4e-34  Score=228.49  Aligned_cols=196  Identities=15%  Similarity=0.046  Sum_probs=149.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCC----cchhhhhhcccccCCCCceEEe----cC----CceEEEE
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV----PISILTKISPLKEMDYPLIFRK----EN----DKLVYQI   75 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~----~~----~~~~~lv   75 (246)
                      ..||+|++|.||+|...     ++.||+|........    ...+.+|+.++++++||||+++    .+    ....+++
T Consensus        26 ~~i~~g~~~~v~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv  100 (283)
T PHA02988         26 VLIKENDQNSIYKGIFN-----NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLI  100 (283)
T ss_pred             eEEeeCCceEEEEEEEC-----CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEE
Confidence            57899999999999883     557899984332222    3566799999999999999998    12    3478999


Q ss_pred             EeccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |||+++|+|.+++.+....   ....+..|++.||.|||+ .+++||||||+||+++.++                    
T Consensus       101 ~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~  180 (283)
T PHA02988        101 LEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKN  180 (283)
T ss_pred             EEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccc
Confidence            9999999999999764321   222334499999999998 5999999999999998765                    


Q ss_pred             -----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          132 -----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       132 -----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                       .....+|+|||||++++|++|..||...+..+....+......+.                  
T Consensus       181 ~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------  242 (283)
T PHA02988        181 VNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK------------------  242 (283)
T ss_pred             cCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC------------------
Confidence                             011246799999999999999999987765554444333111000                  


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                               .+...++++.+|+.+||+.||..|||++|+++
T Consensus       243 ---------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        243 ---------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             ---------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                     01357889999999999999999999999985

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=7.5e-35  Score=232.89  Aligned_cols=206  Identities=15%  Similarity=0.128  Sum_probs=154.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|.+.+.||+|+||.||++.....  ...+..+++|.... .......+.+|+.++++++||||+++    ...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            4689999999999999999986331  11144577887322 22334578899999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhcc-----------cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------
Q 036362           75 IFEYTGLLNLRKVIKNFLD-----------IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~-----------~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------  131 (246)
                      +|||+++++|.+++.....           ..++.     +..|++.||+|||++|++||||||+||+++.++       
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df  164 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF  164 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence            9999999999999864321           11222     334999999999999999999999999998666       


Q ss_pred             ---------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          132 ---------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       132 ---------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                       .....+|+|||||++++|++ |..||...........+..  +... 
T Consensus       165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~--~~~~-  241 (288)
T cd05093         165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVL-  241 (288)
T ss_pred             CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCcC-
Confidence                                             01113669999999999998 8999876655443333322  1100 


Q ss_pred             CcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                               ......++++.+|+.+||+.||.+|||+.++++
T Consensus       242 -------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         242 -------------------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             -------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                                     001356789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=3.6e-34  Score=225.09  Aligned_cols=200  Identities=14%  Similarity=0.153  Sum_probs=154.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQI   75 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv   75 (246)
                      +++|++.+.||+|+||.||++...     +..+++|... .......+.+|+.+++.++|++++++     ..+...+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~k~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-----CCcEEEEEeC-CCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence            368999999999999999999764     4467888732 22334578899999999999999997     345678999


Q ss_pred             EeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---------------  135 (246)
                      +||+++++|.+++.+.....+     ..+..|++.||.|||++|++||||||+||+++.++ ..+               
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~-~~kl~dfg~~~~~~~~~~  157 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQD  157 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC-cEEecCCccceeccccCC
Confidence            999999999999876433222     23344999999999999999999999999998666 112               


Q ss_pred             ---------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          136 ---------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       136 ---------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                           .+|+||+||++++|++ |..||...........+...  .+                  
T Consensus       158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~--~~------------------  217 (256)
T cd05082         158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--YK------------------  217 (256)
T ss_pred             CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--CC------------------
Confidence                                 3679999999999997 99998765443333322220  00                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                              ....+.+++.+.+++.+||..||+.|||+.++++
T Consensus       218 --------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         218 --------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             --------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                    0012467899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.3e-34  Score=225.95  Aligned_cols=205  Identities=23%  Similarity=0.300  Sum_probs=160.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +|++.++||.|++|.||++.+.. +  ++.+++|....   .......+.+|+.+++.++|+||+++    ......++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLS-D--NQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIV   77 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECC-C--CCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEE
Confidence            58999999999999999998876 5  67788887322   22334567789999999999999988    556889999


Q ss_pred             EeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee--------------
Q 036362           76 FEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV--------------  134 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~--------------  134 (246)
                      +||+++++|.+++....  ...+.     ....|++.||.|||++|++||||+|+||+++.++ ..              
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~-~~kl~d~g~~~~~~~~  156 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND-LVKIGDLGISKVLKKN  156 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC-cEEEeeccchhhhccC
Confidence            99999999999986522  12222     3334999999999999999999999999999654 11              


Q ss_pred             -----------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          135 -----------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       135 -----------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                             ..+|+||+|+++++|++|+.||...+.......+...  .                 
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~-----------------  217 (256)
T cd08530         157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG--K-----------------  217 (256)
T ss_pred             CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C-----------------
Confidence                                   2367999999999999999999876544332222210  0                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                               ........+.++.+++.+||..+|.+|||+.++++||++
T Consensus       218 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         218 ---------YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             ---------CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence                     001113567889999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-35  Score=225.96  Aligned_cols=233  Identities=22%  Similarity=0.248  Sum_probs=179.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----------cCC
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----------END   69 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~~   69 (246)
                      +|.-+..+|.|+- .|..+-+.- .  ++.|++|.   ......-..+..+|..++..++|+||+++          ..-
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v-~--~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~   93 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQV-L--GRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF   93 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhh-c--cCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence            5666778888888 677776665 4  77888888   22223345678899999999999999998          234


Q ss_pred             ceEEEEEeccCcccHHHHHhh-hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKN-FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      ..+|+|||++. .+|...+.. ....+++.+..|++.|++|||+.||+||||||+||+++.+.                 
T Consensus        94 ~e~y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~  172 (369)
T KOG0665|consen   94 QEVYLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF  172 (369)
T ss_pred             HhHHHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCccc
Confidence            67899999999 999988864 33456777777999999999999999999999999998766                 


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-----
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-----  186 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  186 (246)
                                          ...+..||||+||+++||+.|...|.+.+..+++.++.+.+|.|.+.....+...     
T Consensus       173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv  252 (369)
T KOG0665|consen  173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYV  252 (369)
T ss_pred             ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHh
Confidence                                1233356999999999999999999999999999999999999998755433221     


Q ss_pred             --------cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          187 --------FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       187 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                              ..+...+++..-....+..+.-+..++|++.+||..||++|.|++++|+||+++
T Consensus       253 ~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  253 ENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                    111111121111111111223356789999999999999999999999999997

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=9.7e-35  Score=230.24  Aligned_cols=203  Identities=17%  Similarity=0.162  Sum_probs=149.4

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe---c-------CCc
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK---E-------NDK   70 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~---~-------~~~   70 (246)
                      |.+.+.||+|+||.||+|.+.. ......+|+|....   .......+.+|+.+++.++|+||+++   .       ...
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~-~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQ-DDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             CccccccCcccCceEEEeEEcc-CCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence            4678999999999999999876 31123678887322   23335578889999999999999987   1       123


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee-------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV-------  134 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~-------  134 (246)
                      ..+++|||+++++|.+++....         ......+..|++.||.|||++||+||||||+|||++.++ .+       
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~  158 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM-NVCVADFGL  158 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC-CEEECCCCc
Confidence            5789999999999998874211         111223344999999999999999999999999998655 11       


Q ss_pred             ----------------------------------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          135 ----------------------------------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       135 ----------------------------------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                        ..+|+|||||++++|++ |..||...........+..  +..    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~----  232 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ--GNR----  232 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCC----
Confidence                                              12569999999999999 7889976554433332222  000    


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                            ......+++.+.+++.+||..||++|||+.+++++
T Consensus       233 ----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         233 ----------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             ----------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                                  00113567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.6e-34  Score=231.40  Aligned_cols=209  Identities=15%  Similarity=0.180  Sum_probs=160.6

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccC
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTG   80 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~   80 (246)
                      ...+||+|+||.||++.... +  +..+++|.. .........+.+|+.+++.++|+||+++    ...+..+++|||++
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~-~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  100 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKS-S--GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE  100 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcC-C--CeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence            34579999999999999876 5  778888873 2223345568889999999999999988    55789999999999


Q ss_pred             cccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------------
Q 036362           81 LLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------------  131 (246)
Q Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------------  131 (246)
                      +++|.+++....  ......+..|++.||.|||++|++||||+|+||+++.++                           
T Consensus       101 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  180 (292)
T cd06657         101 GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP  180 (292)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence            999998875421  222333445999999999999999999999999998765                           


Q ss_pred             -----------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          132 -----------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       132 -----------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                                 .....+|+||+|+++++|++|..||...........+....  +..                       
T Consensus       181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~--~~~-----------------------  235 (292)
T cd06657         181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PPK-----------------------  235 (292)
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--Ccc-----------------------
Confidence                       00123579999999999999999998765544433332210  000                       


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                       .......++.+.+++.+||..||.+||++.++++||||....
T Consensus       236 -~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         236 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             -cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence             000135688999999999999999999999999999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.3e-34  Score=227.62  Aligned_cols=206  Identities=17%  Similarity=0.117  Sum_probs=155.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+..++.....+++|.....  ......+.+|+.+++.++||||+++    ...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            5799999999999999999988653322446788873221  2234578889999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |||+++++|.+++......    ....+..|++.||.|||++|++||||||+||+++.++                    
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  163 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence            9999999999998754211    1222334999999999999999999999999998655                    


Q ss_pred             ---------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          132 ---------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       132 ---------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                           .....+|+|||||+++++++ |..||......+....+.+....+              
T Consensus       164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~--------------  229 (267)
T cd05066         164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP--------------  229 (267)
T ss_pred             eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC--------------
Confidence                                 00112569999999999886 999997665544443333211100              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                    .....++.+.+++.+|++.+|..|||+.++++
T Consensus       230 --------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         230 --------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             --------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence                          01356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-34  Score=224.29  Aligned_cols=200  Identities=13%  Similarity=0.117  Sum_probs=156.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|...     +..+++|..........++.+|+.+++.++|+||+++    ......++|||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   80 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-----GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE   80 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-----CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence            57999999999999999999874     4468899844333346688999999999999999987    45788999999


Q ss_pred             ccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-----------------
Q 036362           78 YTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-----------------  135 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-----------------  135 (246)
                      |+++++|.+++.......+     ..+..|++.||.|||++|++||||||+||+++.++ ..+                 
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~-~~~l~d~g~~~~~~~~~~~~  159 (256)
T cd05039          81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL-VAKVSDFGLAKEASQGQDSG  159 (256)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC-CEEEcccccccccccccccC
Confidence            9999999999976432222     22333999999999999999999999999998765 111                 


Q ss_pred             -------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          136 -------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       136 -------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                         .+|+||+|++++++++ |..||...........+...  ..                    
T Consensus       160 ~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--~~--------------------  217 (256)
T cd05039         160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG--YR--------------------  217 (256)
T ss_pred             CCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC--CC--------------------
Confidence                               2569999999999997 99998766543332222210  00                    


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                            .......++++.+++.+||..+|++|||+.|+++
T Consensus       218 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         218 ------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             ------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                  0011356889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.4e-34  Score=224.77  Aligned_cols=200  Identities=15%  Similarity=0.085  Sum_probs=151.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe---cCCceEEEEEeccCcc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEYTGLL   82 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~~~~~   82 (246)
                      ++||+|+||.||+|.+..+......+++|.......  ....+.+|+.+++.++|+||+++   ......+++|||++++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            479999999999998765221246788888333232  45578899999999999999998   4456789999999999


Q ss_pred             cHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---------------------------
Q 036362           83 NLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---------------------------  132 (246)
Q Consensus        83 ~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---------------------------  132 (246)
                      +|.+++....   ......+..|++.||.|||++|++||||||+||+++.++.                           
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRW  160 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccc
Confidence            9999997643   2222333449999999999999999999999999986650                           


Q ss_pred             --------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          133 --------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       133 --------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    ....+|+|||||++++|++ |..||...+..+....+...  .+                      
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~--~~----------------------  216 (257)
T cd05060         161 PLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG--ER----------------------  216 (257)
T ss_pred             cccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC--Cc----------------------
Confidence                          0113689999999999997 99999766554333332221  00                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                          ...+..+++.+++++.+||..||.+|||+.++++
T Consensus       217 ----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         217 ----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             ----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                0012457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.4e-34  Score=225.55  Aligned_cols=197  Identities=17%  Similarity=0.184  Sum_probs=148.8

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||.||+|++.. +  +..+++|....  .......+.+|+.+++.++||||+++    ......++||||+++
T Consensus         1 ~~lg~g~~g~vy~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRA-D--NTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG   77 (252)
T ss_pred             CccCcccCccEEEEEEec-C--CceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccC
Confidence            468999999999999976 5  77888987221  12234578999999999999999998    566789999999999


Q ss_pred             ccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------------
Q 036362           82 LNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------------  131 (246)
                      ++|.+++.....    ........|++.||.|||++|++||||||+||+++.++                          
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence            999999865321    11222334999999999999999999999999998765                          


Q ss_pred             -----Ceee---------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 -----YTVK---------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 -----~~~~---------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                           .+|+         .+|+||+||++++|++ |..||...........+...  .+.                    
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~--~~~--------------------  215 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG--VRL--------------------  215 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC--CCC--------------------
Confidence                 0011         1479999999999997 88888755443322222210  000                    


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                            ......++.+.+|+.+||..||++|||+.++++
T Consensus       216 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         216 ------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             ------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                  011356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-34  Score=229.30  Aligned_cols=206  Identities=17%  Similarity=0.181  Sum_probs=155.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||++......  .....+++|......  .....+.+|+.+++.++|+||+++    ......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            68999999999999999999886411  124678889832222  223467889999999999999998    5567899


Q ss_pred             EEEeccCcccHHHHHhhhccc-------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI-------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~-------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------  131 (246)
                      ++|||+++++|.+++......             ....++.|++.||.|||++|++||||||+||+++.++         
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~  165 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGM  165 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCccc
Confidence            999999999999998653211             1122344999999999999999999999999998766         


Q ss_pred             -------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          132 -------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       132 -------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                     .....+|+|||||+++++++ |..||...+.......+..  +...   
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~--~~~~---  240 (277)
T cd05032         166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID--GGHL---  240 (277)
T ss_pred             chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc--CCCC---
Confidence                                           01112679999999999998 8999976655443332221  1000   


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                             ..+...+.++.+++.+||..+|+.|||+.++++
T Consensus       241 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         241 -----------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             -----------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                                   011345789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2.6e-34  Score=229.67  Aligned_cols=215  Identities=15%  Similarity=0.180  Sum_probs=157.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCC-CCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~l   74 (246)
                      ++|+..+.||+|+||.||++.+.. +  +..+|+|....  .......+.+|+.++.++. |+||+++    ...+..++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKP-S--GTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI   80 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECC-C--CCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence            578889999999999999999877 5  77889997322  1223457788999999996 9999997    45678899


Q ss_pred             EEeccCcccHHHHHhh---hc-----ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCC--------------
Q 036362           75 IFEYTGLLNLRKVIKN---FL-----DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~---~~-----~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      +|||++ +++.++...   ..     +........|++.||+|||+ .|++||||||+||+++.++              
T Consensus        81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            999988 666554321   11     12223334499999999997 4999999999999998665              


Q ss_pred             --------------C------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 --------------Y------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 --------------~------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                    .            ....+|+||+||++++|++|..||.....  ....+.+......+..      
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~------  231 (288)
T cd06616         160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL------  231 (288)
T ss_pred             cCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC------
Confidence                          0            11247899999999999999999976542  2222222111111000      


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                     .......+++++.+|+.+||..||.+|||+++++.||||....
T Consensus       232 ---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         232 ---------------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             ---------------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence                           0001135788999999999999999999999999999998753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=4.3e-34  Score=225.79  Aligned_cols=206  Identities=18%  Similarity=0.292  Sum_probs=154.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|.... +  ++.+++|..    .........+.+|+.+++.++|++|+++    ...+..
T Consensus         1 ~~~y~~~~~lg~g~~~~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~   77 (267)
T cd08224           1 LGNFKIEKKIGKGQFSVVYKAICLL-D--GRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNEL   77 (267)
T ss_pred             CCceeeeeeeccCCceEEEEEEEcC-C--CCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence            4789999999999999999999986 5  778888862    1222335678899999999999999988    556789


Q ss_pred             EEEEeccCcccHHHHHhhhcc--cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD--IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~--~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      +++|||+++++|.+++.....  ..+.     .++.|++.||.|||++|++||||||+||+++.++              
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            999999999999999864321  1222     2334999999999999999999999999998655              


Q ss_pred             ---------------Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 ---------------YTV---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 ---------------~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                     .+|         ..+|+||+||++++|++|..||......  .....+......           
T Consensus       158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~-----------  224 (267)
T cd08224         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEKCD-----------  224 (267)
T ss_pred             CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc--HHHHHhhhhcCC-----------
Confidence                           011         1357999999999999999998654321  001111000000           


Q ss_pred             ccccccCCCCcchhhhh-CCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAIL-LPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                   .... ....+.++.+++.+||..+|+.|||+.++++
T Consensus       225 -------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         225 -------------YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             -------------CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                         0000 1256789999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=1.8e-34  Score=248.05  Aligned_cols=229  Identities=18%  Similarity=0.173  Sum_probs=144.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEccc-ccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----------cCC
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----------END   69 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~~   69 (246)
                      .++|++.+.||+|+||.||+|+...+ ...+..||+|.... ....+...+| . ++...+.++..+          ...
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~-~~~~e~~~~e-~-l~~~~~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE-YGAVEIWMNE-R-VRRACPNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc-cchhHHHHHH-H-HHhhchhhHHHHHHhhhcccccccC
Confidence            36899999999999999999998763 11245788887221 1111111111 1 111111111111          345


Q ss_pred             ceEEEEEeccCcccHHHHHhhhccc-----------------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeE
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFLDI-----------------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQAL  126 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~~~-----------------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil  126 (246)
                      ...++|+||+++++|.+++......                       .+..++.||+.||.|||++||+||||||+|||
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL  287 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII  287 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence            6899999999999999988643210                       01234459999999999999999999999999


Q ss_pred             EecCCCe-------------------------------ee-------------------------------EEEeehhhH
Q 036362          127 INLSDYT-------------------------------VK-------------------------------IARLISVGC  144 (246)
Q Consensus       127 ~~~~~~~-------------------------------~~-------------------------------~~Di~slG~  144 (246)
                      ++.+...                               |+                               .+|+||+||
T Consensus       288 l~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGv  367 (566)
T PLN03225        288 FSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGL  367 (566)
T ss_pred             EeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHH
Confidence            9854311                               11                               139999999


Q ss_pred             HHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchh---hhhCCCCChHHHHHHHHhhh
Q 036362          145 IFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDL---AILLPDLEPAGVDLLQKMLR  221 (246)
Q Consensus       145 i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~l~  221 (246)
                      ++++|+++..++  .....++.......+.....|...          .........   .+.....+...+||+.+||+
T Consensus       368 iL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~  435 (566)
T PLN03225        368 IFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKL----------VEPRASPDLRRGFEVLDLDGGAGWELLKSMMR  435 (566)
T ss_pred             HHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHh----------hccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence            999999865443  333334444444333221111100          000000010   11122335567899999999


Q ss_pred             cCCCCCCCHHHHhcCCCCcCCCC
Q 036362          222 VNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       222 ~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      +||++|||+.|+|+||||++...
T Consensus       436 ~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        436 FKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             CCcccCCCHHHHhCCcCcCCCCc
Confidence            99999999999999999987543

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.7e-34  Score=230.39  Aligned_cols=214  Identities=17%  Similarity=0.185  Sum_probs=155.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEccccc-------------chhhhhhccccCC--CCCcchhhhhhcccccCCCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAEN-------------AYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFR   65 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~-------------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~   65 (246)
                      .++|++++.||+|+||.||+|....+..             ....+++|.....  ......+.+|+.+++.++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3689999999999999999998765221             1245788873222  223457788999999999999999


Q ss_pred             e----cCCceEEEEEeccCcccHHHHHhhhcc---------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEE
Q 036362           66 K----ENDKLVYQIFEYTGLLNLRKVIKNFLD---------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALI  127 (246)
Q Consensus        66 ~----~~~~~~~lv~e~~~~~~L~~~~~~~~~---------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~  127 (246)
                      +    ......+++||++++++|.+++.+...         ..+.     ....|++.||.|||++|++||||||+||++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence            8    456789999999999999999865431         0122     233499999999999999999999999999


Q ss_pred             ecCC----------------------------------------CeeeEEEeehhhHHHHHHhh--CCCCCCCCcchHHH
Q 036362          128 NLSD----------------------------------------YTVKIARLISVGCIFAEMVI--QEPLSEDASESRER  165 (246)
Q Consensus       128 ~~~~----------------------------------------~~~~~~Di~slG~i~~~l~~--g~~~~~~~~~~~~~  165 (246)
                      +.++                                        .....+|+|||||++++|++  +..||........+
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI  243 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence            8654                                        01123679999999999998  66777655444333


Q ss_pred             HHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          166 ISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ...........                     ...........++++.+++.+||+.||.+|||+.|+++
T Consensus       244 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         244 ENAGHFFRDDG---------------------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHhcccccc---------------------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            33322111000                     00000012356789999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4.6e-34  Score=226.08  Aligned_cols=208  Identities=17%  Similarity=0.125  Sum_probs=157.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +++|++.+.||+|+||.||+|....+......|++|....  .......+..|+.+++.++||||+++    ......++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            3578999999999999999999876332234688888322  22234578899999999999999998    56678899


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------  132 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------  132 (246)
                      +|||+++++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++.                  
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence            9999999999999865321    112223349999999999999999999999999976540                  


Q ss_pred             ----------------e---------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          133 ----------------T---------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       133 ----------------~---------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                      +         ...+|+||+||+++++++ |..||...........+......+           
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~-----------  231 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLP-----------  231 (269)
T ss_pred             cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC-----------
Confidence                            0         112579999999999886 999997665544333332211100           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                       .+..++..+.+++.+||..+|..||++.++++.
T Consensus       232 -----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  264 (269)
T cd05065         232 -----------------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVST  264 (269)
T ss_pred             -----------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                             013567899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-34  Score=236.58  Aligned_cols=208  Identities=14%  Similarity=0.184  Sum_probs=153.3

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~   71 (246)
                      ++|++.+.||+|+||.||.|....+  ...++.||+|......  .....+..|+.++..+ +|+||+++     ..+..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            4899999999999999999975431  1125689999833222  2234677899999999 79999987     34567


Q ss_pred             EEEEEeccCcccHHHHHhhhccc---------------------------------------------------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDI---------------------------------------------------------   94 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~---------------------------------------------------------   94 (246)
                      ++++|||+++++|.+++......                                                         
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            89999999999999998542110                                                         


Q ss_pred             --ccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------------Ceee-
Q 036362           95 --INN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------------YTVK-  135 (246)
Q Consensus        95 --~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------------~~~~-  135 (246)
                        .+.     .+..|++.||.|||++||+||||||+|||++.++                               .+|+ 
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  246 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES  246 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence              111     2334999999999999999999999999999655                               0111 


Q ss_pred             --------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCC
Q 036362          136 --------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP  206 (246)
Q Consensus       136 --------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (246)
                              .+|+||+||++++|++ |..||.+....+........ +..                          .....
T Consensus       247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~--------------------------~~~~~  299 (337)
T cd05054         247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-GTR--------------------------MRAPE  299 (337)
T ss_pred             hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc-cCC--------------------------CCCCc
Confidence                    2589999999999997 99999765433332222211 000                          00013


Q ss_pred             CCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          207 DLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       207 ~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ..++++.+++.+||+.+|+.|||+.|+++|
T Consensus       300 ~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         300 YATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4e-34  Score=226.57  Aligned_cols=207  Identities=18%  Similarity=0.186  Sum_probs=155.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ++|.+.++||+|+||.||+|.+.........+++|.....  ....+.+.+|+.+++.++||||+++   ......+++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            4688999999999999999987652212346788873222  2234578899999999999999998   3346678999


Q ss_pred             eccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           77 EYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      ||+++++|.+++.+....    .......|++.||.|||++|++||||||+||+++..+                     
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  165 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA  165 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceec
Confidence            999999999999763321    1122334999999999999999999999999998655                     


Q ss_pred             ---------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 ---------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 ---------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                               .+|         ..+|+||||++++++++ |..||......+....+...  ...                
T Consensus       166 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~--~~~----------------  227 (270)
T cd05056         166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG--ERL----------------  227 (270)
T ss_pred             CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC--CcC----------------
Confidence                     011         22579999999999986 99999876655443333221  000                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                ..+..+++.+.+++.+|+..+|.+|||+.++++.
T Consensus       228 ----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         228 ----------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                      0124678899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.6e-34  Score=231.26  Aligned_cols=206  Identities=15%  Similarity=0.127  Sum_probs=153.7

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCC-CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIP-DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .+|.+.+.||+|+||.||+|.+...  ......+++|..... ......+.+|+.+++.++|+||+++    ......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            4688999999999999999986431  111445777773222 2223578899999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhcc--------------ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----
Q 036362           75 IFEYTGLLNLRKVIKNFLD--------------IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~--------------~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----  131 (246)
                      ||||+++++|.+++.....              ..+     ..++.||+.||.|||++|++||||||+||+++.++    
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l  164 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI  164 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence            9999999999999965321              111     22334999999999999999999999999998666    


Q ss_pred             ---------------------------Ce---------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCC
Q 036362          132 ---------------------------YT---------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       132 ---------------------------~~---------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                                                 .+         ...+|+||+||++++|++ |..||...........+..  +.
T Consensus       165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~--~~  242 (291)
T cd05094         165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ--GR  242 (291)
T ss_pred             CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC--CC
Confidence                                       00         113679999999999998 9999876555443332211  00


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ..                          ......+..+.+++.+||..||.+|||+.++++
T Consensus       243 ~~--------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         243 VL--------------------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CC--------------------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            00                          011346789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=4e-34  Score=225.01  Aligned_cols=198  Identities=15%  Similarity=0.132  Sum_probs=150.0

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe---cCCceEEEEEeccCcc
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEYTGLL   82 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~~~~~   82 (246)
                      .||+|+||.||+|.+.. ...+..+++|+.....   .....+.+|+.+++.++|+||+++   ...+..+++|||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKM-KKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEec-CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCC
Confidence            58999999999997643 2226678999832222   234578889999999999999988   4456789999999999


Q ss_pred             cHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------------
Q 036362           83 NLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------------  131 (246)
Q Consensus        83 ~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------------  131 (246)
                      +|.+++....   ......+..|++.||.|||++|++||||||+||+++.++                            
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW  160 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence            9999986532   223333444999999999999999999999999998655                            


Q ss_pred             ----Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 ----YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 ----~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                          .+|         ..+|+|||||++++|++ |..||......+....+.... .                       
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~-~-----------------------  216 (257)
T cd05116         161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE-R-----------------------  216 (257)
T ss_pred             CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-C-----------------------
Confidence                001         14679999999999998 999998765544433332210 0                       


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                          ...+..+++++++++.+||+.||+.|||+.++..
T Consensus       217 ----~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         217 ----MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             ----CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence                0012467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=3.7e-34  Score=224.78  Aligned_cols=200  Identities=16%  Similarity=0.150  Sum_probs=153.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEe
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFE   77 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e   77 (246)
                      +++|++.+.||+|+||.||.+...     +..+++|.... ......+.+|+.+++.++|||++++   ...+..+++||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~iK~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e   78 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEYT-----GQKVAVKNIKC-DVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVME   78 (254)
T ss_pred             HHHceeeeeeccCCCCceEecccC-----CCceEEEeecC-cchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEE
Confidence            368999999999999999998653     55688887332 2234678899999999999999998   33455799999


Q ss_pred             ccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-----------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-----------------  135 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-----------------  135 (246)
                      |+++++|.+++.......+..     +..|++.||.|||++|++||||||+||+++.++ .++                 
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~-~~kl~Dfg~~~~~~~~~~~~  157 (254)
T cd05083          79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG-VAKVSDFGLARVGSMGVDNS  157 (254)
T ss_pred             CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-cEEECCCccceeccccCCCC
Confidence            999999999997643322332     333999999999999999999999999998665 122                 


Q ss_pred             -------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          136 -------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       136 -------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                         .+|+||+||++++|++ |..||...........+......                     
T Consensus       158 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------  216 (254)
T cd05083         158 KLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM---------------------  216 (254)
T ss_pred             CCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC---------------------
Confidence                               2569999999999997 99999766544333322221000                     


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                             ......++.+.+++++||..+|..|||+++++.
T Consensus       217 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         217 -------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             -------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                   011457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=5.7e-34  Score=226.21  Aligned_cols=208  Identities=17%  Similarity=0.218  Sum_probs=155.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||.||+|+.+.+.  ...+.+++|.......  ....+.+|++++++++|+||+++    ......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57999999999999999999976422  1245788887332222  24578999999999999999988    5567899


Q ss_pred             EEEeccCcccHHHHHhhhccc-------ccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI-------INNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~-------~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---------  132 (246)
                      +||||+++++|.+++......       .++.     +..|++.||.|||++||+||||||+||+++.++.         
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~  164 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS  164 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence            999999999999999754311       2222     2339999999999999999999999999987650         


Q ss_pred             ------------------------------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          133 ------------------------------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       133 ------------------------------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                    ....+|+||+|++++++++ |..||..............  +.. .    
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~--~~~-~----  237 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA--GKL-E----  237 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc--CCc-C----
Confidence                                          0112579999999999998 7888875544333222211  000 0    


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                    +      .....+++.+.+++.+||..||..|||+.|++++
T Consensus       238 --------------~------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         238 --------------L------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             --------------C------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence                          0      0113577899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1e-33  Score=228.90  Aligned_cols=209  Identities=16%  Similarity=0.221  Sum_probs=158.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      |...++||+|+||.||+|++.. +  +..+++|.....    ......+.+|+.+++.++|||++++    ......+++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~-~--~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   99 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSH-T--NEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV   99 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECC-C--CcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            5667889999999999999876 5  778888883221    1223467889999999999999988    566789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |||+. ++|.+++.....    .....+..|++.||.|||++|++||||+|+||+++.++                    
T Consensus       100 ~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~  178 (313)
T cd06633         100 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFV  178 (313)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcc
Confidence            99998 788887754321    11222344999999999999999999999999998655                    


Q ss_pred             -----Ceee------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          132 -----YTVK------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       132 -----~~~~------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                           .+|+            .+|+||+||++++|++|..||...+.......+... ..+.                  
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~~~~------------------  239 (313)
T cd06633         179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPT------------------  239 (313)
T ss_pred             ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-CCCC------------------
Confidence                 1122            247999999999999999998776554443333221 0000                  


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                              ......+..+++|+.+||+.+|.+|||+.+++.||||...+
T Consensus       240 --------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         240 --------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             --------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                    00134677899999999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=2.6e-34  Score=230.62  Aligned_cols=213  Identities=16%  Similarity=0.136  Sum_probs=152.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccc-------------ccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA-------------ENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~-------------~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~   66 (246)
                      ++|++.+.||+|+||.||++.+...             ......+|+|.....  ......+.+|+.+++.++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4799999999999999999865421             111335788873322  2234578899999999999999988


Q ss_pred             ----cCCceEEEEEeccCcccHHHHHhhhccc--------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEe
Q 036362           67 ----ENDKLVYQIFEYTGLLNLRKVIKNFLDI--------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN  128 (246)
Q Consensus        67 ----~~~~~~~lv~e~~~~~~L~~~~~~~~~~--------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~  128 (246)
                          ...+..+++|||+++++|.+++......              ....+..|++.||.|||++|++||||||+||+++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~  164 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG  164 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc
Confidence                5567899999999999999998764311              1223344999999999999999999999999997


Q ss_pred             cCC-------------------------------C---------eeeEEEeehhhHHHHHHhh--CCCCCCCCcchHHHH
Q 036362          129 LSD-------------------------------Y---------TVKIARLISVGCIFAEMVI--QEPLSEDASESRERI  166 (246)
Q Consensus       129 ~~~-------------------------------~---------~~~~~Di~slG~i~~~l~~--g~~~~~~~~~~~~~~  166 (246)
                      .++                               .         ....+|+|||||++++|++  |..||...+......
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~  244 (296)
T cd05095         165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE  244 (296)
T ss_pred             CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence            544                               0         0124689999999999998  667887654433332


Q ss_pred             HHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          167 SIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .........                     ...........+++.+.+|+.+||..||..|||+.++++
T Consensus       245 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         245 NTGEFFRDQ---------------------GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHhhc---------------------cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            222111000                     000000011356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=3.6e-34  Score=225.56  Aligned_cols=202  Identities=20%  Similarity=0.277  Sum_probs=151.6

Q ss_pred             cceeeeCCccceEEEEEEEc-ccccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            5 RKVELIGRGKYGSFYKCEED-VAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~-~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++.+.||.|.||.||+|.+. .....+..|++|.......  ....+.+|++.+++++||||+++    ...+..++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            46789999999999999998 2133366888998432222  25789999999999999999998    44567999999


Q ss_pred             ccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------  138 (246)
                      |+++++|.+++.......+..     +..||+.||.|||+++++||||+++||+++.++ .++++|              
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~-~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG-QVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT-EEEEESTTTGEETTTSSSEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence            999999999998763233332     333999999999999999999999999999766 555554              


Q ss_pred             ---------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ---------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 |||||++++|+++ |..||...........+.+..-                 
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-----------------  223 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-----------------  223 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE-----------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------------
Confidence                                       9999999999999 7889887765554444433100                 


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                 ......++..+.+++..||..||.+|||+.++++
T Consensus       224 -----------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  224 -----------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             -----------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             -----------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                       0012467899999999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=5.4e-34  Score=227.86  Aligned_cols=216  Identities=16%  Similarity=0.197  Sum_probs=159.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC-----CCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      +|++.+.||+|++|.||+++.......+..+++|....     .......+.+|+.++..+ +|++|+++    ..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            58999999999999999998653122256788887221     122345678899999999 59999987    566789


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-----------------  132 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-----------------  132 (246)
                      ++||||+++++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++.                 
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            99999999999999886532   2223333449999999999999999999999999986540                 


Q ss_pred             ------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          133 ------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       133 ------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                              ....+|+||+|+++++|++|..||...........+.......             
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------------  227 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-------------  227 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-------------
Confidence                                    1234689999999999999999986433221111111110000             


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC---HHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT---VNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s---~~e~l~h~~~~~~~  243 (246)
                                  ....+..++.++.+++.+||+.||++|||   +.++|+||||+++.
T Consensus       228 ------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         228 ------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             ------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence                        00012457789999999999999999998   56779999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=9.9e-34  Score=224.04  Aligned_cols=206  Identities=18%  Similarity=0.133  Sum_probs=156.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|+..+.||+|+||.||+|+...+......+++|.....  ......+.+|+.+++.++|+||+++    ...+..+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            4788999999999999999998753322346788873222  2234568889999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-------------------  132 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-------------------  132 (246)
                      |||+++++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++.                   
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  164 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT  164 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence            999999999999865321    122233449999999999999999999999999986650                   


Q ss_pred             -------------ee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          133 -------------TV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       133 -------------~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                   +|         ..+|+||+||+++++++ |..||...........+......|.             
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~-------------  231 (268)
T cd05063         165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA-------------  231 (268)
T ss_pred             eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC-------------
Confidence                         01         12579999999999987 9999976665444444432111110             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     ....+.++.+++.+|+..||..||++.++++
T Consensus       232 ---------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         232 ---------------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             ---------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                           1246789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=2.3e-34  Score=229.39  Aligned_cols=207  Identities=14%  Similarity=0.046  Sum_probs=155.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      .+|++.+.||+|+||.||+|+...+.  .....+|+|......  .....+.+|+.++..++||||+++    ......+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            57899999999999999999875421  124678999833222  123567889999999999999998    5567899


Q ss_pred             EEEeccCcccHHHHHhhhcc--------------ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---
Q 036362           74 QIFEYTGLLNLRKVIKNFLD--------------IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~--------------~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---  131 (246)
                      ++++|+++++|.+++.....              ..+     ..+..|++.||.|||++|++||||||+||+++.++   
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k  164 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK  164 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE
Confidence            99999999999999853110              011     22344999999999999999999999999998654   


Q ss_pred             -------------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhC
Q 036362          132 -------------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMG  173 (246)
Q Consensus       132 -------------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~  173 (246)
                                                           .....+|+||+||++++|++ |..||.+.........+.....
T Consensus       165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~  244 (283)
T cd05091         165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQV  244 (283)
T ss_pred             ecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence                                                 00113579999999999998 8888877655444333333100


Q ss_pred             CCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          174 EPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .                            .....+++.+.+|+.+||+.||..|||+.++++.
T Consensus       245 ~----------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         245 L----------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             C----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            0                            0124678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2e-33  Score=220.76  Aligned_cols=203  Identities=14%  Similarity=0.122  Sum_probs=156.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .+|++.+.||+|+||.||++.+..    +..+++|...........+.+|+.+++.++||+++++    ......++++|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE----KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE   79 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC----CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence            578999999999999999998864    4467888744444445678999999999999999988    55678899999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---------------------  132 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---------------------  132 (246)
                      |+++++|.+++.....    ........|++.||.|||++|++||||||+||+++.++.                     
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          80 FMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence            9999999999865321    122233349999999999999999999999999986540                     


Q ss_pred             ---------ee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          133 ---------TV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       133 ---------~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                               +|         ..+|+||+|+++++|++ |..||...........+......                   
T Consensus       160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------  220 (256)
T cd05112         160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL-------------------  220 (256)
T ss_pred             CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC-------------------
Confidence                     01         12679999999999998 89999766544433333221000                   


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                               ......++.+.+|+.+||..+|+.|||+.+++++
T Consensus       221 ---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         221 ---------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             ---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence                     0013357899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=5e-34  Score=228.33  Aligned_cols=204  Identities=17%  Similarity=0.177  Sum_probs=151.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +|++.+.||+|+||.||+|......  .....+++|.....  ......+.+|+.+++.++||||+++    ...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            5889999999999999999875311  11345777763221  1223568899999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhccc----------------------cc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEE
Q 036362           75 IFEYTGLLNLRKVIKNFLDI----------------------IN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALI  127 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~----------------------~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~  127 (246)
                      ++||+++++|.+++......                      .+     ..+..|++.||.|||++|++||||||+||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            99999999999998642110                      11     1233399999999999999999999999999


Q ss_pred             ecCCCeee-----------------------------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHH
Q 036362          128 NLSDYTVK-----------------------------------------IARLISVGCIFAEMVI-QEPLSEDASESRER  165 (246)
Q Consensus       128 ~~~~~~~~-----------------------------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~  165 (246)
                      +.++ .++                                         .+|+||||+++++|++ |..||.+.......
T Consensus       161 ~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  239 (290)
T cd05045         161 AEGR-KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF  239 (290)
T ss_pred             cCCC-cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            8655 111                                         2469999999999998 99999765543322


Q ss_pred             HHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          166 ISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ....+....                            ..+...++++.+|+.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~----------------------------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         240 NLLKTGYRM----------------------------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHhCCCCC----------------------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            222111000                            011457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-34  Score=238.63  Aligned_cols=208  Identities=19%  Similarity=0.255  Sum_probs=165.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .-|.+.+.||+|.|++|.++++.. +  +..||+|....+.   ...+.+.+|+++|..++||||+++    .....+|+
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~-t--~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHIL-T--GTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecC-C--CceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            468999999999999999999988 6  8889999832222   223457899999999999999998    66789999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA--------------  137 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~--------------  137 (246)
                      ||||+.+|.+++++.++.   +.....+..|+++|++|||+++|+|||||++|+|++.+- ..+++              
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m-nikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM-NIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc-ceeeeccccceeecccccc
Confidence            999999999999997753   223333444999999999999999999999999998543 34444              


Q ss_pred             -------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          138 -------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       138 -------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               |+||+|+++|-|+.|..||.+.+-.........                      
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~----------------------  269 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR----------------------  269 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----------------------
Confidence                                     499999999999999999987543221111111                      


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                             ....++--++.+++++|+++|..+|.+|++.+++..|.|....
T Consensus       270 -------gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  270 -------GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             -------eeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence                   0111123578999999999999999999999999999998653

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=6.6e-34  Score=224.86  Aligned_cols=206  Identities=17%  Similarity=0.268  Sum_probs=154.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|++|.||++.+.. +  +..+++|....    .......+.+|+.+++.++|+||+++    ...+..
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~~-~--~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   77 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCLL-D--GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL   77 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeecC-C--CceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeE
Confidence            5789999999999999999999876 5  77888886221    22234578889999999999999987    456789


Q ss_pred             EEEEeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      +++|||+++++|.+++....  ...++     .+..|++.||.|||++|++|+||||+||+++.++              
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            99999999999999886422  12222     2334999999999999999999999999998655              


Q ss_pred             ---------------Cee---------eEEEeehhhHHHHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 ---------------YTV---------KIARLISVGCIFAEMVIQEPLSEDASESR-ERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 ---------------~~~---------~~~Di~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                     .+|         ..+|+||+|+++++|++|..||.+..... ...........++          
T Consensus       158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------  227 (267)
T cd08229         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP----------  227 (267)
T ss_pred             cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCC----------
Confidence                           011         12579999999999999999986543211 1111111000000          


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                      ......++.+.+++.+||..||.+|||+.++++
T Consensus       228 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         228 ----------------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             ----------------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence                            001347889999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=8.3e-34  Score=228.93  Aligned_cols=210  Identities=15%  Similarity=0.193  Sum_probs=158.6

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|...+.||+|+||.||+|+... +  +..+++|....    .......+.+|+.+++.++|+|++++    ......++
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~-~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVR-N--SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcC-C--CcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence            47788899999999999999876 5  67788887321    12223467789999999999999987    46678999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |+||+. +++.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                   
T Consensus        93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  171 (308)
T cd06634          93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF  171 (308)
T ss_pred             EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence            999998 688777643221    12223334999999999999999999999999998765                   


Q ss_pred             ------C------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 ------Y------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 ------~------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                            .            ....+|+||+||++++|++|..||...........+... ..+.                 
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~-----------------  233 (308)
T cd06634         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPA-----------------  233 (308)
T ss_pred             cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc-CCCC-----------------
Confidence                  0            011368999999999999999998765443333222221 0000                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                               ......+..+.+|+++||..+|.+|||+.++++|||+....
T Consensus       234 ---------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~  274 (308)
T cd06634         234 ---------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (308)
T ss_pred             ---------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence                     00135678899999999999999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=6.8e-34  Score=230.05  Aligned_cols=206  Identities=16%  Similarity=0.156  Sum_probs=153.4

Q ss_pred             CCccceeeeCCccceEEEEEEEccc----ccchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA----ENAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|.+.++||+|+||.||+|+...+    ......+++|.....  ......+.+|+.+++.+ +||||+++    ...+
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            4789999999999999999986421    111446788873221  22234678899999999 69999998    4567


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..+++|||+++++|.+++.....              ..+.     .+..|++.||.|||++|++||||||+||+++.++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~  171 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCC
Confidence            89999999999999999965321              1122     2344999999999999999999999999998665


Q ss_pred             ----------------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHH
Q 036362          132 ----------------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFR  170 (246)
Q Consensus       132 ----------------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~  170 (246)
                                                              .....+|+||||+++++|++ |..||...........+..
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  251 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE  251 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence                                                    01123679999999999998 8888876554433333222


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .  ..                          ...+..++.++++++.+||..||..|||+.++++
T Consensus       252 ~--~~--------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         252 G--HR--------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             C--CC--------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            0  00                          0012456789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1e-33  Score=235.14  Aligned_cols=207  Identities=13%  Similarity=0.129  Sum_probs=152.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhcccc--CCCCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADI--IPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|++....  .....||+|...  ......+.+.+|+.+++.++ ||||+++    ......
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~  116 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI  116 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence            57889999999999999999874311  113468888832  22223457889999999996 9999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhccc----------------------------------------------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI----------------------------------------------------------   94 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~----------------------------------------------------------   94 (246)
                      ++||||+++++|.+++......                                                          
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
T cd05105         117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE  196 (400)
T ss_pred             EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence            9999999999999988643110                                                          


Q ss_pred             ------------------------------------ccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--
Q 036362           95 ------------------------------------INN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--  131 (246)
Q Consensus        95 ------------------------------------~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--  131 (246)
                                                          .+.     .++.|++.||.|||++||+||||||+|||++.++  
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~  276 (400)
T cd05105         197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIV  276 (400)
T ss_pred             hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEE
Confidence                                                011     1334999999999999999999999999998654  


Q ss_pred             --------------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhh
Q 036362          132 --------------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       132 --------------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~  172 (246)
                                                            .....+|+|||||++++|++ |..||............... 
T Consensus       277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~-  355 (400)
T cd05105         277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS-  355 (400)
T ss_pred             EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc-
Confidence                                                  00123579999999999997 88888765433222221110 


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      +...                          .....+++++.+++.+||..||+.|||+.++.+
T Consensus       356 ~~~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         356 GYRM--------------------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CCCC--------------------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            0000                          011357889999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1e-33  Score=222.72  Aligned_cols=198  Identities=13%  Similarity=0.068  Sum_probs=148.5

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEeccCccc
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~~~~~~   83 (246)
                      .||+|+||.||+|.+.. ...+..+|+|+....  ......+.+|+.++++++|+||+++   ......++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~-~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKM-RKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEec-CCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCC
Confidence            48999999999998753 211456888883222  2224568899999999999999998   44567899999999999


Q ss_pred             HHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------------
Q 036362           84 LRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------------  131 (246)
Q Consensus        84 L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------------  131 (246)
                      |.+++....    .........|++.||.|||++|++||||||+||+++.++                            
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKW  160 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCC
Confidence            999986422    222233344999999999999999999999999997654                            


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 -------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                   ...+.+|+|||||+++++++ |..||...........+...  .+                      
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~~----------------------  216 (257)
T cd05115         161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG--KR----------------------  216 (257)
T ss_pred             CcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--CC----------------------
Confidence                         00114679999999999996 99999876554443333221  00                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                          .......++++.+++.+||..||+.||++.++.+
T Consensus       217 ----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         217 ----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                0012456899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2e-33  Score=224.02  Aligned_cols=221  Identities=16%  Similarity=0.143  Sum_probs=152.3

Q ss_pred             CCc-cceeeeCCccceEEEEEEEccc-ccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe------cCCce
Q 036362            2 EKY-RKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK------ENDKL   71 (246)
Q Consensus         2 ~~y-~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~   71 (246)
                      ++| ++.+.||+|+||+||++..... ...+..+|+|.....  ......+.+|+++++.++||||+++      .....
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG   82 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence            567 9999999999999998764321 112667899983322  2234577889999999999999997      22456


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-----------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-----------------  132 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-----------------  132 (246)
                      .+++|||+++++|.+++....  ......+..|++.||.|||++|++||||||+||+++.++.                 
T Consensus        83 ~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             EEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            899999999999999987532  2222233449999999999999999999999999986550                 


Q ss_pred             ------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          133 ------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       133 ------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                              ....+|+||||+++++|++|..|+......  +.....   ......  .......
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~---~~~~~~--~~~~~~~  235 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIG---PKQGQM--TVVRLIE  235 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhc---cccccc--chhhhhh
Confidence                                    012367999999999999999887653321  000110   000000  0000000


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .....      .........+.++.+++.+||..||+.|||++++++
T Consensus       236 ~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         236 LLERG------MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             hhhcC------CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            00000      000112457899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.1e-33  Score=225.06  Aligned_cols=206  Identities=14%  Similarity=0.105  Sum_probs=152.2

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-chhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||+||+|++..++. ....||+|...  ........+.+|+.+++.++|+||+++   ......+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            578999999999999999998765221 11247888732  222334578889999999999999987   334567899


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      ++|+++++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                    
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~  166 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY  166 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccccee
Confidence            999999999999865321    12233444999999999999999999999999997655                    


Q ss_pred             -----------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 -----------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 -----------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                 .++         ..+|+|||||+++||++ |..||...........+.. ...+.              
T Consensus       167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~--------------  231 (279)
T cd05109         167 HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERLP--------------  231 (279)
T ss_pred             ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCC--------------
Confidence                       011         12479999999999988 8889876544332222221 00000              


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                   .....+.++.+++.+||..||..|||+.++++
T Consensus       232 -------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         232 -------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             -------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                         01356789999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.8e-34  Score=224.24  Aligned_cols=199  Identities=13%  Similarity=0.101  Sum_probs=145.1

Q ss_pred             eeeCCccceEEEEEEEccccc----chhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAEN----AYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~----~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|.+..+..    ....+++|... ........+.+|+.+++.++||||+++    ......++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            479999999999998765211    13457888732 222334577889999999999999988    445778999999


Q ss_pred             cCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC----------------------
Q 036362           79 TGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY----------------------  132 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~----------------------  132 (246)
                      +++++|.+++.....    ........||+.||.|||++||+||||||+||+++.++.                      
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence            999999999965422    111223449999999999999999999999999975531                      


Q ss_pred             ---------------------eeeEEEeehhhHHHHHHhhC-CCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          133 ---------------------TVKIARLISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       133 ---------------------~~~~~Di~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                           ....+|+||+||++++|++| .+|+..............   .                
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~---~----------------  221 (258)
T cd05078         161 KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED---R----------------  221 (258)
T ss_pred             chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc---c----------------
Confidence                                 11235799999999999998 456654433322211111   0                


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 ...+...+.++.+|+.+||+.||+.|||++++++.
T Consensus       222 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         222 -----------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             -----------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence                       00113456789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=6.3e-34  Score=250.67  Aligned_cols=206  Identities=21%  Similarity=0.267  Sum_probs=154.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|++.++||+|+||.||+|.+.. +  ++.||+|.....    .....++.+|+.+++.++||||+++    ...+..
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~-t--g~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~l   77 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPV-C--SRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPV   77 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECC-C--CcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEE
Confidence            6899999999999999999999977 5  778999983221    1224578899999999999999988    566789


Q ss_pred             EEEEeccCcccHHHHHhhhccc---------c-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI---------I-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------  132 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~---------~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------  132 (246)
                      +++|||++|++|.+++......         .     +..+..||+.||.|||++||+||||||+||+++.++.      
T Consensus        78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDF  157 (932)
T PRK13184         78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDW  157 (932)
T ss_pred             EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEec
Confidence            9999999999999998642110         0     1123349999999999999999999999999976440      


Q ss_pred             --------------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcch
Q 036362          133 --------------------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASES  162 (246)
Q Consensus       133 --------------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~  162 (246)
                                                                        ....+|+||+||++++|++|..||......
T Consensus       158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~  237 (932)
T PRK13184        158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR  237 (932)
T ss_pred             CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence                                                              011247999999999999999999764332


Q ss_pred             HHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          163 RERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .....  .....|..                        ......+++.+.+++.+||..||++||+..+.+.
T Consensus       238 ki~~~--~~i~~P~~------------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        238 KISYR--DVILSPIE------------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhh--hhccChhh------------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            21111  11000000                        0001467889999999999999999988766553

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=3e-33  Score=226.58  Aligned_cols=211  Identities=15%  Similarity=0.204  Sum_probs=159.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|+..+.||+|+||.||++++.. +  +..+++|.....    ......+.+|+.+++.++|+|++++    ...+..++
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~-~--~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l  102 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVR-T--NEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWL  102 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcC-C--CcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEE
Confidence            37788999999999999999876 5  778888873221    1223468889999999999999998    46678999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      ||||++ ++|.+.+.....    .....+..|++.||.|||++|++||||+|+||+++.++                   
T Consensus       103 v~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (317)
T cd06635         103 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF  181 (317)
T ss_pred             EEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccc
Confidence            999998 688777754221    12222344999999999999999999999999998655                   


Q ss_pred             ------Cee------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          132 ------YTV------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       132 ------~~~------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                            .+|            ..+|+||+||++++|++|..||...........+.... .+.                 
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~-----------------  243 (317)
T cd06635         182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPT-----------------  243 (317)
T ss_pred             cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcc-CCC-----------------
Confidence                  011            13579999999999999999987655444333333210 000                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                               ......++.+.+++.+||..+|.+|||+.++++|+|+.....
T Consensus       244 ---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         244 ---------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             ---------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence                     001346788999999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-33  Score=222.20  Aligned_cols=201  Identities=15%  Similarity=0.186  Sum_probs=154.1

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||.||+|.+......+..+++|.......  ....+.+|+..++.++|+||+++    ......+++|||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            478999999999999875212266788888333222  25788899999999999999998    557889999999999


Q ss_pred             ccHHHHHhhhc-------ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           82 LNLRKVIKNFL-------DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~-------~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++|.+++....       ...++     .+..|++.||.|||++|++||||||+||+++.++                  
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            99999997641       12222     2333999999999999999999999999999755                  


Q ss_pred             ----------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 ----------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 ----------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                            .....+|+||+|+++++|++ |..||...........+..  +..             
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~~-------------  225 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GYR-------------  225 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCC-------------
Confidence                                  01123579999999999998 6999987755444333332  000             


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                   ...+..+++++.+++.+||..||..|||+.|++++
T Consensus       226 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         226 -------------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             -------------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                         01124568999999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.9e-33  Score=223.75  Aligned_cols=206  Identities=17%  Similarity=0.189  Sum_probs=148.9

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhh---cccccCCCCceEEe----cCCceEEEEEe
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKI---SPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~---~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .||+|+||.||+|.+.. +  ++.||+|......    ........|.   ..++..+||+|+++    ...+..++|||
T Consensus         1 ~ig~g~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           1 IIGRGGFGEVYGCRKAD-T--GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             CcccCCCeEEEEEEEec-C--CCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence            48999999999999876 5  7789999722111    1112233343   34444579999987    55678999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      |+.|++|.+++....   +.....+..|++.||.|||+++++||||||+||+++.++                       
T Consensus        78 ~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (278)
T cd05606          78 LMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (278)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence            999999998886532   222333444999999999999999999999999998654                       


Q ss_pred             --------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 --------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 --------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                    .....+|+||+|+++++|++|..||..................+                      
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------  215 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA----------------------  215 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC----------------------
Confidence                          01123689999999999999999997653221111100000000                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                          ...+...++++.+++.+||..||.+||     ++.++++||||+.+.
T Consensus       216 ----~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         216 ----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             ----CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence                011235689999999999999999999     999999999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.5e-33  Score=226.84  Aligned_cols=207  Identities=12%  Similarity=0.135  Sum_probs=154.2

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||++.....  ......+|+|.....  ......+.+|+.+++++ +|+||+++    ...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            4788999999999999999986321  112557888873221  22235688999999999 79999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      +++|||+++++|.+++.......+     ..+..|++.||.|||++|++|+||||+||+++.++                
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  194 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMND  194 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence            999999999999999875332222     23344999999999999999999999999998554                


Q ss_pred             ---------------Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 ---------------YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 ---------------~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                     .+|         ..+|+||+||++++|++ |..||............... +.+.          
T Consensus       195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~----------  263 (302)
T cd05055         195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE-GYRM----------  263 (302)
T ss_pred             CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc-CCcC----------
Confidence                           001         12579999999999998 99998776554433322221 0000          


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                      ......++++.+|+.+||..+|+.|||+.|+++
T Consensus       264 ----------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         264 ----------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             ----------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                            001346789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=5.9e-34  Score=233.03  Aligned_cols=208  Identities=13%  Similarity=0.169  Sum_probs=151.5

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+...  ...++.||+|.....  ......+.+|+.++..+ +|+||+++     ..+..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            5899999999999999999985421  112668899983321  22234688899999999 68999987     33457


Q ss_pred             EEEEEeccCcccHHHHHhhhcc----------------------------------------------------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD----------------------------------------------------------   93 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~----------------------------------------------------------   93 (246)
                      .+++|||+++++|.+++.....                                                          
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            8999999999999999864210                                                          


Q ss_pred             -------ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------------
Q 036362           94 -------IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------------  131 (246)
Q Consensus        94 -------~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------------  131 (246)
                             ..+     ..+..|++.||.|||++||+||||||+||+++.++                              
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK  246 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence                   001     11234999999999999999999999999998654                              


Q ss_pred             -Ce---------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          132 -YT---------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       132 -~~---------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                       .+         ...+|+||||+++++|++ |..||............... +..                         
T Consensus       247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~-------------------------  300 (343)
T cd05103         247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTR-------------------------  300 (343)
T ss_pred             eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc-cCC-------------------------
Confidence             00         112479999999999997 88888765433222221110 000                         


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                       ...+...++++.+++.+||..||.+|||+.|+++|
T Consensus       301 -~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         301 -MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             00012356789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=7.6e-34  Score=229.07  Aligned_cols=207  Identities=14%  Similarity=0.152  Sum_probs=153.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc----cchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE----NAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|.+.+.||+|+||.||++.+....    .....+|+|.....  ......+.+|+.+++.+ +|+||+++    ...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            57899999999999999999864311    11346888873322  22334688899999999 79999998    5567


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..++||||+++++|.+++.....              ..+.     .+..|++.||.|||++|++||||||+||+++.++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~  177 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  177 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCC
Confidence            89999999999999999975321              1122     2344999999999999999999999999998655


Q ss_pred             ----------------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHH
Q 036362          132 ----------------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFR  170 (246)
Q Consensus       132 ----------------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~  170 (246)
                                                              .....+|+||+||++++|++ |..||...........+..
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  257 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE  257 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc
Confidence                                                    01123579999999999998 8888876544332222221


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .  .+                          ...+...++++.+|+.+||..+|..|||+.+++++
T Consensus       258 ~--~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         258 G--HR--------------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             C--CC--------------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            0  00                          00124578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=234.68  Aligned_cols=203  Identities=21%  Similarity=0.332  Sum_probs=162.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccC
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTG   80 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~   80 (246)
                      ++||+|-||+||-|.+.. +  ++.||+|+   ..........+.+|+.||++++||.|+.+    +..+..++|||-+.
T Consensus       570 evLGSGQFG~VYgg~hRk-t--GrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRK-T--GRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             hhccCCcceeeecceecc-c--CceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc
Confidence            689999999999999988 6  89999998   34455566889999999999999999988    78899999999999


Q ss_pred             cccHHHHHhhhcccccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEEE---------------
Q 036362           81 LLNLRKVIKNFLDIINNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIAR---------------  138 (246)
Q Consensus        81 ~~~L~~~~~~~~~~~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~D---------------  138 (246)
                       ||....|-..-...+++.     ..||+.||.|||.+||+|.|+||+|||+.+..  ...|++|               
T Consensus       647 -GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs  725 (888)
T KOG4236|consen  647 -GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS  725 (888)
T ss_pred             -chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence             676666643222333332     33999999999999999999999999998665  2344444               


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                             |||.|+|+|.-++|.+||....+. +|++. ...+-+|.+                 
T Consensus       726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN-AaFMyPp~P-----------------  787 (888)
T KOG4236|consen  726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN-AAFMYPPNP-----------------  787 (888)
T ss_pred             hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhc-cccccCCCc-----------------
Confidence                                   999999999999999999855443 33322 111111111                 


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                |..+++.+.|||..+|+..=++|.|.+..|+|||+++.
T Consensus       788 ----------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  788 ----------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             ----------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence                      36789999999999999999999999999999999975

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.9e-34  Score=228.05  Aligned_cols=213  Identities=17%  Similarity=0.144  Sum_probs=152.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc-----------cchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe--
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE-----------NAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK--   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~-----------~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~--   66 (246)
                      ++|++.++||+|+||.||+|.+..+.           .....||+|....  .......+.+|++++++++|+|++++  
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            48999999999999999999875411           0122478887322  11223468889999999999999988  


Q ss_pred             --cCCceEEEEEeccCcccHHHHHhhhcc----------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEec
Q 036362           67 --ENDKLVYQIFEYTGLLNLRKVIKNFLD----------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINL  129 (246)
Q Consensus        67 --~~~~~~~lv~e~~~~~~L~~~~~~~~~----------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~  129 (246)
                        ......++||||+++++|.+++.....          ..+.     .+..|++.||.|||++|++||||||+||+++.
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~  164 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN  164 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence              566789999999999999999854210          0111     23449999999999999999999999999986


Q ss_pred             CC----------------------------------------CeeeEEEeehhhHHHHHHhh--CCCCCCCCcchHHHHH
Q 036362          130 SD----------------------------------------YTVKIARLISVGCIFAEMVI--QEPLSEDASESRERIS  167 (246)
Q Consensus       130 ~~----------------------------------------~~~~~~Di~slG~i~~~l~~--g~~~~~~~~~~~~~~~  167 (246)
                      ++                                        .....+|+|||||++++|++  +..||...........
T Consensus       165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~  244 (295)
T cd05097         165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN  244 (295)
T ss_pred             CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence            54                                        00123679999999999988  5667776554443333


Q ss_pred             HHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          168 IFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .........                     ........+..++.+.+|+.+||+.||.+|||++++++
T Consensus       245 ~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         245 TGEFFRNQG---------------------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHhhhhcc---------------------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            222110000                     00000012346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.8e-33  Score=222.65  Aligned_cols=203  Identities=15%  Similarity=0.197  Sum_probs=148.0

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||+||+|.... ......+++|.....  ......+.+|+.+++.++|+||+++    ......++||||+++
T Consensus         1 ~~lg~G~fg~v~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHR-GMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             CcCCccCCceEEEEEEec-CCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            468999999999997644 222556788862221  2223467889999999999999998    556789999999999


Q ss_pred             ccHHHHHhhhccc--------ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           82 LNLRKVIKNFLDI--------INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~~--------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      ++|.+++......        ....++.||+.||.|||++||+||||||+|||++.++                      
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK  159 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence            9999998664311        1223444999999999999999999999999998765                      


Q ss_pred             ---------Ce----------------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 ---------YT----------------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 ---------~~----------------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                               .+                .+.+|+||+||++++|++ |..||..................+.+        
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------  231 (269)
T cd05042         160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLP--------  231 (269)
T ss_pred             CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCC--------
Confidence                     00                123679999999999998 78888766554433333321111000        


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     .......+++.+.+++..|+ .||++|||++++++
T Consensus       232 ---------------~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         232 ---------------KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             ---------------CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence                           00012457888999999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.5e-33  Score=223.06  Aligned_cols=205  Identities=15%  Similarity=0.098  Sum_probs=150.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-chhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+..+.. ....+++|.....  ......+..|+..+..++||||+++   ......+++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            579999999999999999999865221 1124677773221  1223466778888899999999998   445667899


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      +||+++++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++ .++                
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~-~~kl~Dfg~~~~~~~~~~~  165 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS-IVQIADFGVADLLYPDDKK  165 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC-cEEEcCCccceeccCCCcc
Confidence            999999999999965321    12233444999999999999999999999999998665 111                


Q ss_pred             -------------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          136 -------------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       136 -------------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                               .+|+|||||+++++++ |..||.+....... .+......+.             
T Consensus       166 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~-------------  231 (279)
T cd05111         166 YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP-DLLEKGERLA-------------  231 (279)
T ss_pred             cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHCCCcCC-------------
Confidence                                     2479999999999998 99999765443222 2222100000             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                    .....+.++.+++.+|+..||.+|||+.|+++
T Consensus       232 --------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         232 --------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             --------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                          01235678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.9e-33  Score=224.38  Aligned_cols=220  Identities=15%  Similarity=0.199  Sum_probs=150.7

Q ss_pred             ccceeeeCCccceEEEEEEEccc-ccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe------cCCceEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVYQ   74 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~l   74 (246)
                      |++++.||+|+||.||+|+.... ...+..|++|...  ........+.+|+.+++.++||||+++      ......++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            68999999999999999975320 1226788999832  123334578899999999999999987      22467899


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +|||++|++|.+++.+...    .....+..|++.||.|||++|++||||||+||+++.++                   
T Consensus        86 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05079          86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY  165 (284)
T ss_pred             EEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccc
Confidence            9999999999999865321    12223344999999999999999999999999998655                   


Q ss_pred             ----------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          132 ----------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       132 ----------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                            .....+|+||+||++++|+++..|+......     .....+....+....     ..
T Consensus       166 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~  235 (284)
T cd05079         166 YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL-----FLKMIGPTHGQMTVT-----RL  235 (284)
T ss_pred             eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch-----hhhhcccccccccHH-----HH
Confidence                                  0112367999999999999987654322110     011111111000000     00


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ......   ......+..+++++.+|+.+||+.||.+|||+++++++
T Consensus       236 ~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         236 VRVLEE---GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHc---CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            000000   00011124678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.5e-33  Score=224.43  Aligned_cols=206  Identities=15%  Similarity=0.146  Sum_probs=154.0

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .+|++.++||+|+||.||++.....  ...+..+++|... ........+.+|+++++.++|+||+++    ......++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            3678899999999999999975321  1124567777622 223334578999999999999999988    55678999


Q ss_pred             EEeccCcccHHHHHhhhcc-------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----
Q 036362           75 IFEYTGLLNLRKVIKNFLD-------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~-------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----  131 (246)
                      +|||+++++|.+++.....             ..+.     .+..|++.||.|||++|++||||||+||+++.++     
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~  164 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG  164 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence            9999999999999865321             1122     2233999999999999999999999999998655     


Q ss_pred             --------------------------Ce---------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCC
Q 036362          132 --------------------------YT---------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       132 --------------------------~~---------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                                                .+         ...+|+|||||++++|++ |.+||......+....+...  .+
T Consensus       165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~~  242 (280)
T cd05092         165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG--RE  242 (280)
T ss_pred             CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC--cc
Confidence                                      00         112579999999999998 89999766554443333221  00


Q ss_pred             CcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          176 SEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .                          ..+..+++.+.+|+.+||+.||..|||+.++++
T Consensus       243 ~--------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         243 L--------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             C--------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            0                          011357889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.1e-33  Score=223.05  Aligned_cols=222  Identities=16%  Similarity=0.205  Sum_probs=151.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcc-cccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.... ....+..|++|.... .......+.+|+.+++.++||||+++      ......+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            478999999999999999997531 011266888988322 22234578899999999999999997      2345789


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-----------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-----------------  132 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-----------------  132 (246)
                      +|+||+++++|.+++.+..    ......++.|++.||.|||++|++||||||+||+++.++.                 
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  163 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE  163 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence            9999999999999986532    1222334449999999999999999999999999986550                 


Q ss_pred             ------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          133 ------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       133 ------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                              ....+|+||+||++++|++|..++...... .    ....+......    .....
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~----~~~~~~~~~~~----~~~~~  234 (284)
T cd05081         164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-F----MRMMGNDKQGQ----MIVYH  234 (284)
T ss_pred             ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-h----hhhcccccccc----cchHH
Confidence                                    011256999999999999987665432211 0    11111100000    00000


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ........   ........+++++.+|+.+||..+|+.|||+.|+++
T Consensus       235 ~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         235 LIELLKNN---GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHhcC---CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            00000000   000112467889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.4e-33  Score=227.15  Aligned_cols=207  Identities=15%  Similarity=0.139  Sum_probs=154.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcc----cccchhhhhhccccC--CCCCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV----AENAYQTVLLKADII--PDGVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~----~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|+...    +......+++|....  .......+.+|+.+++.+ +||||+++    ....
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   94 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   94 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence            578999999999999999997532    111244788887322  223345788999999999 79999987    5567


Q ss_pred             eEEEEEeccCcccHHHHHhhhccc--------------cc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDI--------------IN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~--------------~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..+++|||+++++|.+++......              .+     .....|++.||.|||++|++||||||+||+++.++
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~  174 (304)
T cd05101          95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENN  174 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCC
Confidence            889999999999999999753211              11     12234999999999999999999999999998655


Q ss_pred             -------------------------------C---------eeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHH
Q 036362          132 -------------------------------Y---------TVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFR  170 (246)
Q Consensus       132 -------------------------------~---------~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~  170 (246)
                                                     .         ....+|+||||++++++++ |..||...+.......+..
T Consensus       175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  254 (304)
T cd05101         175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE  254 (304)
T ss_pred             cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc
Confidence                                           0         1123679999999999998 7788876654443333221


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .  ..                          .......+.++.+|+.+||..+|..|||+.|+++.
T Consensus       255 ~--~~--------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         255 G--HR--------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             C--Cc--------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            1  00                          00113578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-33  Score=219.05  Aligned_cols=198  Identities=19%  Similarity=0.248  Sum_probs=155.0

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ||+|+||.||.+.... .  ++.+++|......    .....+.+|+.+++.++|+||+++    ..+...+++||++++
T Consensus         1 lg~G~~~~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   77 (250)
T cd05123           1 LGKGSFGKVLLVRKKD-T--GKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPG   77 (250)
T ss_pred             CCCCCceEEEEEEECC-C--CcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCC
Confidence            6999999999999876 5  6788888722221    234578899999999999999987    567899999999988


Q ss_pred             ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------------
Q 036362           82 LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------------  131 (246)
                      ++|.+++....   .........|++.||.|||+.+++|+||+|+||+++.++                           
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          78 GELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence            99999997642   222333344999999999999999999999999998765                           


Q ss_pred             -----------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          132 -----------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       132 -----------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                                 .....+|+||+|++++++++|..||...+.......+..  +..                         
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~-------------------------  210 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPL-------------------------  210 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCC-------------------------
Confidence                       011236799999999999999999976654332222222  000                         


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCH---HHHhcCCCC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITV---NDALNHHYY  239 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~---~e~l~h~~~  239 (246)
                        ..+...++.+.+++++||..||+.|||+   .++++||||
T Consensus       211 --~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         211 --RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             --CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence              0113458899999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=3.6e-33  Score=219.29  Aligned_cols=203  Identities=15%  Similarity=0.135  Sum_probs=155.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +++.+.||.|+||.||++.+.. .  .....+++|.......  ....+.+|+.+++.++|+||+++    ...+..+++
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKG-LSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             CcccceeccCCCcceEEEEecC-CCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence            4678999999999999999876 4  0127788998432222  45688899999999999999998    455789999


Q ss_pred             EeccCcccHHHHHhhhccc-----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI-----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~-----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      |||+++++|.+++......     ....+..|++.||.+||++|++||||||+||+++.++                   
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            9999999999998754322     2223334999999999999999999999999999776                   


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                          .....+|+||+|+++++|++ |.+||...+.......+.....                 
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----------------  222 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR-----------------  222 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-----------------
Confidence                                01123579999999999998 7888876554444333322100                 


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                 .......+.++.+++.+||..||+.|||+.|+++
T Consensus       223 -----------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      223 -----------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             -----------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence                       0011346889999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=2.1e-33  Score=225.34  Aligned_cols=213  Identities=18%  Similarity=0.233  Sum_probs=156.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      +++|++.+.||+|++|.||+|.+.. +  +..||+|.....  ......+.+|+.++... +|+||+++    ......+
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~   90 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKK-T--GHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF   90 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECC-C--CeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence            3689999999999999999999987 5  678899983222  22334566677766666 49999988    5677899


Q ss_pred             EEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCC-----------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      ++|||++ ++|.+++.....    .....+..|++.||.|||+ +||+||||+|+||+++.++                 
T Consensus        91 ~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~  169 (296)
T cd06618          91 ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK  169 (296)
T ss_pred             EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence            9999998 678777755322    1112344499999999997 6999999999999998654                 


Q ss_pred             -----------C-------------eeeEEEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 -----------Y-------------TVKIARLISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 -----------~-------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                 .             ....+|+||||+++++|++|+.||...... +....+..   ...+..       
T Consensus       170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~-------  239 (296)
T cd06618         170 AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ---EEPPSL-------  239 (296)
T ss_pred             cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc---CCCCCC-------
Confidence                       0             012468999999999999999999753322 12222111   110000       


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                             +         .....++++.+|+.+||..||..|||++++++||||....
T Consensus       240 -------~---------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  280 (296)
T cd06618         240 -------P---------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE  280 (296)
T ss_pred             -------C---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence                   0         0024678999999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-33  Score=221.85  Aligned_cols=199  Identities=16%  Similarity=0.140  Sum_probs=146.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEeccC
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEYTG   80 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~~~   80 (246)
                      +.||+|+||.||+|+...+. ....+++|...  ........+.+|+.++.++ +||||+++    ......+++|||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCC-CeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            46899999999999987622 12245677632  1223345788899999999 79999988    45667899999999


Q ss_pred             cccHHHHHhhhcc-------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------
Q 036362           81 LLNLRKVIKNFLD-------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        81 ~~~L~~~~~~~~~-------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------  131 (246)
                      +++|.+++.....                   .....+..|++.||+|||++|++||||||+||+++.++          
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~  159 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS  159 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence            9999999865321                   11123334999999999999999999999999998655          


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                 .....+|+|||||++++|++ |..||...+.......+.....          
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~----------  229 (270)
T cd05047         160 RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR----------  229 (270)
T ss_pred             cccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC----------
Confidence                                       01123679999999999997 9999976554433332211000          


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                        .+.....+.++.+++.+|+..||..|||+.++++
T Consensus       230 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         230 ------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             ------------------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                              0011346789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.6e-33  Score=228.51  Aligned_cols=207  Identities=15%  Similarity=0.134  Sum_probs=154.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc----cchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE----NAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      .+|++.+.||+|+||.||.|.+....    .....+++|.....  ......+.+|+.+++++ +|+||+++    ...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            36899999999999999999864311    01235788873321  22345788999999999 79999998    4567


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..++++||+++++|.+++.+...              ..+..     +..|++.||.|||++|++||||||+||+++.++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~  171 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence            89999999999999999875321              11222     344999999999999999999999999998654


Q ss_pred             ----------------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHH
Q 036362          132 ----------------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFR  170 (246)
Q Consensus       132 ----------------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~  170 (246)
                                                              .....+|+|||||++++|++ |..||...+.......+..
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  251 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE  251 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence                                                    01113679999999999998 8888876654443333322


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ...                            ...+...+.++.+|+.+||..+|..|||+.|++++
T Consensus       252 ~~~----------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         252 GHR----------------------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             CCC----------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            100                            00113567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3.3e-33  Score=220.47  Aligned_cols=199  Identities=15%  Similarity=0.168  Sum_probs=141.9

Q ss_pred             eeeCCccceEEEEEEEcccc---------cchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            8 ELIGRGKYGSFYKCEEDVAE---------NAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~---------~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +.||+|+||.||+|......         .....+++|.. .........+.+|+.+++.++||||+++    ......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            46899999999999864311         11235677762 2223334577888999999999999998    4556789


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++|||+++++|..++....    ......++.||+.||.|||++||+||||||+|||++.++                  
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence            9999999999988886432    112223444999999999999999999999999997433                  


Q ss_pred             --------------Ceee----------EEEeehhhHHHHHHh-hCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 --------------YTVK----------IARLISVGCIFAEMV-IQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 --------------~~~~----------~~Di~slG~i~~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                    .+|+          .+|+|||||++++|+ .|..|+......+... ...   ...          
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~---~~~----------  226 (262)
T cd05077         161 TVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYE---GQC----------  226 (262)
T ss_pred             cccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHh---cCc----------
Confidence                          0111          257999999999997 4788876543222111 111   000          


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                      ......++++.+|+.+||..||.+||++.+++++
T Consensus       227 ----------------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         227 ----------------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             ----------------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence                            0012345789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.5e-33  Score=223.99  Aligned_cols=206  Identities=12%  Similarity=0.115  Sum_probs=153.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.....  ...+..+++|.....  ......+.+|+.+++.++||||+++    ......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            5799999999999999999987430  112667888873222  1224568889999999999999987    5567899


Q ss_pred             EEEeccCcccHHHHHhhhccc--------------------cc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEe
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI--------------------IN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALIN  128 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~--------------------~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~  128 (246)
                      +++||+++++|.+++......                    .+     ..+..|++.||.|||++|++||||||+||+++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~  164 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG  164 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEec
Confidence            999999999999999643210                    11     12344999999999999999999999999998


Q ss_pred             cCCC-------------------------------e---------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHH
Q 036362          129 LSDY-------------------------------T---------VKIARLISVGCIFAEMVI-QEPLSEDASESRERIS  167 (246)
Q Consensus       129 ~~~~-------------------------------~---------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~  167 (246)
                      .++.                               +         ...+|+|||||++++|++ |..||.+....+....
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~  244 (288)
T cd05050         165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYY  244 (288)
T ss_pred             CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            6650                               0         112579999999999997 8888876554433332


Q ss_pred             HHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          168 IFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      +...  ..                          .......+.++.+|+.+||+.||..|||+.|+++
T Consensus       245 ~~~~--~~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         245 VRDG--NV--------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HhcC--CC--------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            2220  00                          0001356789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=5.4e-33  Score=221.20  Aligned_cols=206  Identities=12%  Similarity=0.123  Sum_probs=153.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc-cchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe-----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~-~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+..+. .....+++|....  .......+.+|+.+++.++|+||+++     ......+
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            57999999999999999999986511 1145678887322  22234567889999999999999987     3357889


Q ss_pred             EEEeccCcccHHHHHhhhcc------cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD------IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~------~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------  131 (246)
                      ++++|+++++|.+++.....      ..+..     +..|++.||.|||++|++||||||+||+++.++           
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~  165 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSR  165 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence            99999999999999865321      12222     333999999999999999999999999997644           


Q ss_pred             -----------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          132 -----------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       132 -----------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                   .....+|+||+||+++++++ |..||...+.......+..  +...     
T Consensus       166 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~--~~~~-----  238 (280)
T cd05043         166 DLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD--GYRL-----  238 (280)
T ss_pred             cccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc--CCCC-----
Confidence                                         01123679999999999998 9999976554332222221  1000     


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                           .....+++++.+++.+||..||+.|||+.++++
T Consensus       239 ---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         239 ---------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             ---------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                                 001346789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=6.8e-33  Score=218.48  Aligned_cols=201  Identities=13%  Similarity=0.160  Sum_probs=146.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEEeccC
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIFEYTG   80 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~e~~~   80 (246)
                      +.||+|+||.||+|.+.........+|+|....  .......+.+|+.+++.++||||+++     ..++..+++|||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998754222245788887322  12234577889999999999999987     34556889999999


Q ss_pred             cccHHHHHhhhcccc-c---chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------------------------
Q 036362           81 LLNLRKVIKNFLDII-N---NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------------------------  132 (246)
Q Consensus        81 ~~~L~~~~~~~~~~~-~---~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------------------------  132 (246)
                      +++|.+++.+..... .   .....|++.||.|||++|++||||||+|||++.++.                        
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  160 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT  160 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence            999999987543221 1   223349999999999999999999999999986650                        


Q ss_pred             ---------ee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          133 ---------TV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       133 ---------~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                               +|         ..+|+|||||++++|++ |.+||...+.......+..  +.+.                 
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------------  221 (262)
T cd05058         161 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ--GRRL-----------------  221 (262)
T ss_pred             cCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCC-----------------
Confidence                     01         12569999999999999 5667765544333222221  0000                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                               ......++.+.+++.+||..+|++|||+.|+++.
T Consensus       222 ---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         222 ---------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             ---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                     0013457899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.2e-33  Score=221.97  Aligned_cols=198  Identities=14%  Similarity=0.106  Sum_probs=141.4

Q ss_pred             eeCCccceEEEEEEEcccc---------------------cchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe
Q 036362            9 LIGRGKYGSFYKCEEDVAE---------------------NAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK   66 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~---------------------~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~   66 (246)
                      +||+|+||.||+|....++                     .....|++|... ........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            6899999999999753211                     012346777622 112224567788999999999999998


Q ss_pred             ----cCCceEEEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------
Q 036362           67 ----ENDKLVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------  131 (246)
Q Consensus        67 ----~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------  131 (246)
                          ......++||||+++++|..++.+...    .....+..|++.||.|||++||+||||||+||+++..+       
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~  161 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP  161 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence                456788999999999999998865321    12222344999999999999999999999999997432       


Q ss_pred             -------------------------C----------eeeEEEeehhhHHHHHHh-hCCCCCCCCcchHHHHHHHHhhCCC
Q 036362          132 -------------------------Y----------TVKIARLISVGCIFAEMV-IQEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       132 -------------------------~----------~~~~~Di~slG~i~~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                                               .          ....+|+|||||++++++ .|..||.................  
T Consensus       162 ~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--  239 (274)
T cd05076         162 FIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHR--  239 (274)
T ss_pred             eeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccC--
Confidence                                     0          012367999999999985 68888876543322111111000  


Q ss_pred             CcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          176 SEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                                  .+...++.+.+++.+||..+|++|||+.+++++
T Consensus       240 ----------------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         240 ----------------------------LPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ----------------------------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence                                        012345689999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=7.5e-33  Score=216.80  Aligned_cols=197  Identities=16%  Similarity=0.185  Sum_probs=148.5

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||.||+|....    +..+++|.....  ......+.+|+.+++.++||||+++    ...+..++||||+++
T Consensus         1 ~~ig~g~~g~vy~~~~~~----~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKD----KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEecC----CcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCC
Confidence            478999999999998654    567888873221  1123468889999999999999987    556789999999999


Q ss_pred             ccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------------
Q 036362           82 LNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------------  131 (246)
                      ++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                          
T Consensus        77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (250)
T cd05085          77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI  156 (250)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence            999999865321    12223334999999999999999999999999998665                          


Q ss_pred             -------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          132 -------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       132 -------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                   .....+|+||+|++++++++ |..||...........+...  ..                      
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~--~~----------------------  212 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG--YR----------------------  212 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC--CC----------------------
Confidence                         00112579999999999998 99999766544333322221  00                      


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                          ......++..+.+++.+||..+|+.|||+.|+++.
T Consensus       213 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         213 ----MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                00113568899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=8.6e-33  Score=218.84  Aligned_cols=203  Identities=15%  Similarity=0.163  Sum_probs=145.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||.||+|.... ......+++|......  .....+.+|+.+++.++||||+++    ......++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNS-GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcC-CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            468999999999998754 2225567888732222  223478889999999999999998    456778999999999


Q ss_pred             ccHHHHHhhhccc---cc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           82 LNLRKVIKNFLDI---IN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~~---~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      ++|.+++......   ..     .....|++.||.|||++|++||||||+||+++.++                      
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~  159 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP  159 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence            9999998653211   11     12344999999999999999999999999998654                      


Q ss_pred             ---------Ce----------------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 ---------YT----------------VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 ---------~~----------------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                               .+                ...+|+||+|+++++|++ |..||..............  +....        
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~--------  229 (269)
T cd05087         160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR--EQQLK--------  229 (269)
T ss_pred             CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh--cccCC--------
Confidence                     00                124799999999999996 9999976554433222111  00000        


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                             ..      ........++.+.+++++|+ .+|++|||++|++.
T Consensus       230 -------~~------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         230 -------LP------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             -------CC------CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence                   00      00011246788999999998 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-34  Score=213.70  Aligned_cols=210  Identities=16%  Similarity=0.232  Sum_probs=159.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~l   74 (246)
                      ++.+.+..||.|..|+|++++... +  +..+|+|.  .........+++..++++.+-+ +|+||++    ..+...++
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs-~--~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I  168 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRS-T--GHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI  168 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcc-c--ceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence            455677889999999999999988 6  88899998  3344444567777777776664 8999998    34556778


Q ss_pred             EEeccCcccHHHHHhh----hcccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           75 IFEYTGLLNLRKVIKN----FLDIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~----~~~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      .||.+. .-++.++.+    ..+..+...++.+++||.||.+ +||+|||+||+|||+|..| .+|++|           
T Consensus       169 cMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G-niKlCDFGIsGrlvdSk  246 (391)
T KOG0983|consen  169 CMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-NIKLCDFGISGRLVDSK  246 (391)
T ss_pred             HHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC-CEEeecccccceeeccc
Confidence            888887 666666644    2244445555599999999996 5899999999999999777 344444           


Q ss_pred             ------------------------------eehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          139 ------------------------------LISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       139 ------------------------------i~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                    +||||+.++|+.+|..||.+.+. .+.+..+..  ..| +.         
T Consensus       247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln--~eP-P~---------  314 (391)
T KOG0983|consen  247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN--EEP-PL---------  314 (391)
T ss_pred             ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh--cCC-CC---------
Confidence                                          99999999999999999987543 344444444  111 10         


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                   + ....++|+.+++|+..||++|+.+||...++|+|||+...
T Consensus       315 -------------L-~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  315 -------------L-PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             -------------C-CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence                         0 0013589999999999999999999999999999998764

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=6.6e-33  Score=230.26  Aligned_cols=207  Identities=13%  Similarity=0.134  Sum_probs=153.8

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCC--CCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIP--DGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      ++|.+.+.||+|+||.||+|++...  ......||+|.....  ......+.+|+.++..+. ||||+++    ...+..
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~  116 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI  116 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence            4678889999999999999987431  112557899984322  222346889999999997 9999998    455789


Q ss_pred             EEEEeccCcccHHHHHhhhccc----------------------------------------------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI----------------------------------------------------------   94 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~----------------------------------------------------------   94 (246)
                      ++||||+++|+|.+++......                                                          
T Consensus       117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (401)
T cd05107         117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK  196 (401)
T ss_pred             EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence            9999999999999998653210                                                          


Q ss_pred             --------------------------------------c-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           95 --------------------------------------I-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        95 --------------------------------------~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                                                            .     ...+..|++.||.|||++|++||||||+|||++.++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCC
Confidence                                                  0     011334999999999999999999999999998654


Q ss_pred             Ceee-----------------------------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVK-----------------------------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~-----------------------------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       ..+                                         .+|+||||+++++|++ |..||......+......
T Consensus       277 -~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~  355 (401)
T cd05107         277 -LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI  355 (401)
T ss_pred             -EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHH
Confidence             111                                         2469999999999998 888887655444333222


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .. +...                          ..+..++.++.+|+.+||..||..||+++|+++.
T Consensus       356 ~~-~~~~--------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         356 KR-GYRM--------------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             Hc-CCCC--------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            21 1000                          0123568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-32  Score=219.54  Aligned_cols=206  Identities=18%  Similarity=0.137  Sum_probs=153.5

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-chhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+..+.. ....+++|......  .....+.+|+.+++.++|+||+++   ......+++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            578999999999999999999865221 12257788732222  234578889999999999999988   334789999


Q ss_pred             EeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||+++++|.+++.+....    .....+.|++.||.|||++|++||||||+||+++.++                    
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~  166 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY  166 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccce
Confidence            9999999999998764321    2222334999999999999999999999999997654                    


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                          .....+|+||+||+++++++ |..||......+....+...  ...              
T Consensus       167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~~~--------------  230 (279)
T cd05057         167 HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG--ERL--------------  230 (279)
T ss_pred             ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC--CCC--------------
Confidence                                00123669999999999998 99999876544333322221  000              


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  ..+...+..+.+++.+||..||..|||+.++++
T Consensus       231 ------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         231 ------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             ------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                        001346788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-34  Score=234.65  Aligned_cols=202  Identities=17%  Similarity=0.134  Sum_probs=154.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ...+...||+|.||+||+|+|-.      .||||+   ....+...+.|.+|+.++++.+|.||+-+   .-...+.||+
T Consensus       393 ev~l~~rIGsGsFGtV~Rg~whG------dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiT  466 (678)
T KOG0193|consen  393 EVLLGERIGSGSFGTVYRGRWHG------DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIIT  466 (678)
T ss_pred             Hhhccceeccccccceeeccccc------ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeee
Confidence            45688999999999999999977      488888   33334467789999999999999999987   3344459999


Q ss_pred             eccCcccHHHHHhhh----cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------------
Q 036362           77 EYTGLLNLRKVIKNF----LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~----~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------------  136 (246)
                      .+|+|-+|..++.-.    .-.....+..||+.|..|||.++|||||+|..||++.+++ .+++                
T Consensus       467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~-kVkIgDFGLatvk~~w~g~~  545 (678)
T KOG0193|consen  467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL-KVKIGDFGLATVKTRWSGEQ  545 (678)
T ss_pred             hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC-cEEEecccceeeeeeecccc
Confidence            999999999998532    1122333444999999999999999999999999999765 3444                


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||||+++|||++|..||........+..+.+.++.|.            
T Consensus       546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd------------  613 (678)
T KOG0193|consen  546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD------------  613 (678)
T ss_pred             ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc------------
Confidence                                        4499999999999999999994433332222222211221            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  ......++++++++|+..||.++++.||+..+||.
T Consensus       614 ------------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  614 ------------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             ------------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence                        11122467889999999999999999999999886

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.9e-33  Score=218.68  Aligned_cols=187  Identities=18%  Similarity=0.207  Sum_probs=140.4

Q ss_pred             ccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCcccHHHHH
Q 036362           13 GKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVI   88 (246)
Q Consensus        13 G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~~~L~~~~   88 (246)
                      |.+|.||+|.+.. +  ++.+|+|......    ...+|...+....||||+++    ...+..+++|||+++++|.+++
T Consensus         4 g~~~~v~~~~~~~-~--~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDTR-T--QQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEcc-C--CcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            8999999999987 6  7788999832221    23345555555679999998    5568899999999999999998


Q ss_pred             hhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------------Ce------
Q 036362           89 KNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------------YT------  133 (246)
Q Consensus        89 ~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------------~~------  133 (246)
                      .+...   .....+..|++.||.|||++|++||||||+||+++.++                          .+      
T Consensus        77 ~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~  156 (237)
T cd05576          77 SKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGI  156 (237)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCC
Confidence            65422   22233344999999999999999999999999998765                          01      


Q ss_pred             ---eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCCh
Q 036362          134 ---VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEP  210 (246)
Q Consensus       134 ---~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (246)
                         ...+|+||+|+++++|++|..|+......               ..  .   .             .....+..+++
T Consensus       157 ~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~--~---~-------------~~~~~~~~~~~  203 (237)
T cd05576         157 SEETEACDWWSLGAILFELLTGKTLVECHPSG---------------IN--T---H-------------TTLNIPEWVSE  203 (237)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cc--c---c-------------cccCCcccCCH
Confidence               12368999999999999998776432110               00  0   0             00011245788


Q ss_pred             HHHHHHHHhhhcCCCCCCCH-----HHHhcCCCC
Q 036362          211 AGVDLLQKMLRVNPKERITV-----NDALNHHYY  239 (246)
Q Consensus       211 ~~~~ll~~~l~~dp~~R~s~-----~e~l~h~~~  239 (246)
                      .+.+++.+||+.||++|||+     +++++||||
T Consensus       204 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         204 EARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            99999999999999999996     999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-32  Score=215.09  Aligned_cols=196  Identities=18%  Similarity=0.185  Sum_probs=149.1

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      ++||+|+||.||+|....    ++.+++|.......  ....+.+|+.+++.++|+||+++    ......+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~----~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG----NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEeC----CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence            478999999999998865    66788887322221  34578899999999999999987    566789999999999


Q ss_pred             ccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------------
Q 036362           82 LNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------------  131 (246)
                      ++|.+++.....    ........+++.||.|||++|++||||||+||+++.++                          
T Consensus        77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence            999999865321    12223344999999999999999999999999998655                          


Q ss_pred             -----Cee---------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCC
Q 036362          132 -----YTV---------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEES  196 (246)
Q Consensus       132 -----~~~---------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (246)
                           .+|         ..+|+||+|+++++|++ |..||...........+......+                     
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~---------------------  215 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP---------------------  215 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC---------------------
Confidence                 001         13579999999999998 888887665433332222110000                     


Q ss_pred             CcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                             .+...+.++.+++.+||..+|.+|||+.|+++
T Consensus       216 -------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         216 -------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             -------CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                   01356789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-34  Score=228.74  Aligned_cols=212  Identities=19%  Similarity=0.317  Sum_probs=180.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++++++..||-|+||.|-++.... .  ...+|+|.    ........+++..|-++|...++|+|+++    .+.++.
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~-~--~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv  495 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNS-Q--KATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV  495 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecc-c--chHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence            3567788899999999999998876 3  22456555    55666778899999999999999999998    778899


Q ss_pred             EEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      |++||-|-||.|+..+..   +.+.+...+..+++.|+.|||++|||+||+||+|.+++.+| .+|+.|           
T Consensus       496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G-y~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG-YLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC-ceEEeehhhHHHhccCC
Confidence            999999999999999965   33556666777999999999999999999999999999888 556666           


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                 .||||++++|+++|.+||.+.+....+..|.+.+..                 
T Consensus       575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~-----------------  637 (732)
T KOG0614|consen  575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK-----------------  637 (732)
T ss_pred             ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-----------------
Confidence                                       899999999999999999999998888888774322                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                .+.++.++..+.+|++++...+|..|+.     +.|+-.|.||.+++
T Consensus       638 ----------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd  684 (732)
T KOG0614|consen  638 ----------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFD  684 (732)
T ss_pred             ----------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence                      1123578899999999999999999996     89999999999874

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.4e-33  Score=227.64  Aligned_cols=210  Identities=21%  Similarity=0.266  Sum_probs=163.6

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe------cCCceEEEEE
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVYQIF   76 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~lv~   76 (246)
                      +....||+|+|-+||+|.+..++...+.-.+|.  ...++...+++..|+++|+.|+|+||+++      ...+..-+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            455689999999999999977332223333555  34455556899999999999999999998      3446688999


Q ss_pred             eccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhhC--ceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           77 EYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHSN--RCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~--~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      |.+..|+|..|.+++...   .+..+.+||+.||.|||++  .|+|||||.+||+|+.....+|+.|             
T Consensus       123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak  202 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK  202 (632)
T ss_pred             ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccc
Confidence            999999999999886533   3344555999999999998  5999999999999997754555555             


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCcchHHHH-HHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDASESRERI-SIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                             |||||..+.||.++..||.--....++. ++..  |..                   
T Consensus       203 svIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiK-------------------  261 (632)
T KOG0584|consen  203 SVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIK-------------------  261 (632)
T ss_pred             eeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCC-------------------
Confidence                                   9999999999999999998766655444 3443  111                   


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                         +..+.   .--.+++++||.+||.. .+.|||+.|+|.||||..-
T Consensus       262 ---P~sl~---kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  262 ---PAALS---KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             ---HHHhh---ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence               11111   12368999999999999 9999999999999999874

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.3e-32  Score=217.68  Aligned_cols=203  Identities=15%  Similarity=0.143  Sum_probs=145.6

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||.||++.... ......+++|...  ........+.+|+.+++.++||||+++    ......++||||+++
T Consensus         1 ~~lg~G~~g~v~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYT-DTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             CcCCCCcCceEEEEEEEc-CCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence            358999999999997654 2223445566522  222345688999999999999999988    556788999999999


Q ss_pred             ccHHHHHhhhcc--ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------------
Q 036362           82 LNLRKVIKNFLD--IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~--~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------------  131 (246)
                      ++|.+++.+...  ...     ..+..||+.||.|||+++++||||||+|||++.++                       
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  159 (268)
T cd05086          80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED  159 (268)
T ss_pred             CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence            999999875321  111     23344999999999999999999999999997654                       


Q ss_pred             --------Cee----------------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          132 --------YTV----------------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       132 --------~~~----------------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                              .++                ..+|+|||||++++|++ |..||...........+......  ...       
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~-------  230 (268)
T cd05086         160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV--KLF-------  230 (268)
T ss_pred             CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc--ccC-------
Confidence                    012                23789999999999997 56788765554444433221000  000       


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                 .   .......++.+.+++..|+ .+|++|||++++++
T Consensus       231 -----------~---~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         231 -----------K---PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             -----------C---CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence                       0   0011346788999999999 78999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=9.4e-33  Score=220.05  Aligned_cols=221  Identities=19%  Similarity=0.232  Sum_probs=154.0

Q ss_pred             CCccceeeeCCccceEEEEEEEccc-ccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----c--CCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----E--NDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~--~~~~~   72 (246)
                      .+|++.+.||+|+||.||+|+...+ ...+..+|+|.......  ....+.+|+.+++.++|+||+++    .  .+...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            4688999999999999999987532 12267889998433333  36689999999999999999987    2  25679


Q ss_pred             EEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------------  131 (246)
                      +++|||+++++|.+++.....    .....+..|++.||.|||++|++||||||+||+++.++                 
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK  163 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence            999999999999999975431    12223344999999999999999999999999998665                 


Q ss_pred             ------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          132 ------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       132 ------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                              .....+|+|||||++++|++|..|+.......     ....+......     ...
T Consensus       164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~-----~~~  233 (284)
T cd05038         164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----LRMIGIAQGQM-----IVT  233 (284)
T ss_pred             cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh-----ccccccccccc-----cHH
Confidence                                    00113679999999999999998876432211     00001100000     000


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ..........   .......++.++.+++.+||..||..|||+.|+++
T Consensus       234 ~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         234 RLLELLKEGE---RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHHcCC---cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            0000000000   00011346789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.5e-32  Score=214.66  Aligned_cols=200  Identities=17%  Similarity=0.115  Sum_probs=150.5

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      +.||+|++|.||+|.+..+......+++|......  .....+.+|+.++++++|+||+++    .. ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            46899999999999986533113368888832222  345678899999999999999987    33 889999999999


Q ss_pred             ccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           82 LNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ++|.+++.+.....+..     +..|++.||.|||++|++||||||+||+++.++                         
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  159 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH  159 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence            99999997643222222     233999999999999999999999999998665                         


Q ss_pred             ----------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          132 ----------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       132 ----------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                      .....+|+||+||++++|++ |..||......+....+... +..    .              
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~----~--------------  220 (257)
T cd05040         160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE-GER----L--------------  220 (257)
T ss_pred             CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CCc----C--------------
Confidence                            00112679999999999998 99999766555444433321 000    0              


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                              ......+..+.+++.+||..+|++|||+.++++
T Consensus       221 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         221 --------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             --------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence                    001346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.5e-32  Score=217.30  Aligned_cols=200  Identities=14%  Similarity=0.133  Sum_probs=148.4

Q ss_pred             eeeCCccceEEEEEEEcccc---cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            8 ELIGRGKYGSFYKCEEDVAE---NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~---~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +.||+|+||.||+|+.....   ...+.+++|.....  ......+.+|+.+++.++||||+++    ...+..+++|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            46899999999999876411   11357888873222  2345678899999999999999998    556789999999


Q ss_pred             cCcccHHHHHhhhcc-----cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----Cee----------
Q 036362           79 TGLLNLRKVIKNFLD-----IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----YTV----------  134 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~-----~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----~~~----------  134 (246)
                      +++++|.+++.....     ..+.     .+..|++.||.|||+++++|+||||+||+++.++    ...          
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            999999999865321     1122     2334999999999999999999999999998643    011          


Q ss_pred             -------------------------------eEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          135 -------------------------------KIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       135 -------------------------------~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                     ..+|+|||||++++|++ |..||...........+... ..        
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~--------  231 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-GR--------  231 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-Cc--------
Confidence                                           12579999999999998 99999765544333222110 00        


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                         .......++.+.+++.+||..+|.+|||++++++
T Consensus       232 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         232 -------------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             -------------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                               0011356789999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=5.3e-33  Score=220.40  Aligned_cols=205  Identities=14%  Similarity=0.151  Sum_probs=150.1

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEec----C---C---c
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRKE----N---D---K   70 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~----~---~---~   70 (246)
                      |++.+.||+|+||.||+|........+..+|+|....   .......+.+|+.+++.++||||+++.    .   .   .
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            6788999999999999998754222267889997322   222345688999999999999999981    1   1   2


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------  131 (246)
                      ..+++++|+.+++|.+++....         ......+..|++.||.|||++||+||||||+||+++.++          
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            3478999999999988874311         111223344999999999999999999999999998655          


Q ss_pred             ------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          132 ------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       132 ------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                    .....+|+|||||++++|++ |.+||...+.......+...  ...    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~~~----  234 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG--NRL----  234 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC--CcC----
Confidence                                          00123679999999999998 88888766543332222220  000    


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                            ......++.+.+++.+||..+|..|||+.+++++
T Consensus       235 ----------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         235 ----------------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             ----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                  0013567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4e-33  Score=230.23  Aligned_cols=211  Identities=16%  Similarity=0.236  Sum_probs=164.2

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      |..++.||-|+||.|.+++..+ +  ...||.|.    .-...........|-.||...+.+.||++    .+++.+|.|
T Consensus       631 Fvkik~iGvGAFGeV~Lv~KvD-T--~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  631 FVKIKTIGVGAFGEVCLVRKVD-T--RALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             eEEEeeecccccceeEEEeecc-h--hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            5678899999999999999888 6  78888887    22233456678889999999999999998    678899999


Q ss_pred             EeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------
Q 036362           76 FEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------  131 (246)
                      |+|++|||+.+++-+.   .+.....+++.+..|+++.|+.|+|||||||.|||||.+|                     
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY  787 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY  787 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence            9999999999998763   2444455666999999999999999999999999999988                     


Q ss_pred             -----------------------------------------------------------CeeeEEEeehhhHHHHHHhhC
Q 036362          132 -----------------------------------------------------------YTVKIARLISVGCIFAEMVIQ  152 (246)
Q Consensus       132 -----------------------------------------------------------~~~~~~Di~slG~i~~~l~~g  152 (246)
                                                                                 ....++|.||.|||++||+.|
T Consensus       788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g  867 (1034)
T KOG0608|consen  788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG  867 (1034)
T ss_pred             ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence                                                                       223345589999999999999


Q ss_pred             CCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC---C
Q 036362          153 EPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI---T  229 (246)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---s  229 (246)
                      ++||.....-+.-.+                         ..+|...-......++|+++.++|.++. .+++.|+   .
T Consensus       868 ~~pf~~~tp~~tq~k-------------------------v~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng  921 (1034)
T KOG0608|consen  868 QPPFLADTPGETQYK-------------------------VINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNG  921 (1034)
T ss_pred             CCCccCCCCCcceee-------------------------eeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccc
Confidence            999986543211000                         0111111111112578999999999876 6788887   4


Q ss_pred             HHHHhcCCCCcCCC
Q 036362          230 VNDALNHHYYRDVV  243 (246)
Q Consensus       230 ~~e~l~h~~~~~~~  243 (246)
                      ++|+-.||||+.+.
T Consensus       922 ~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  922 ADQVKAHPFFKGID  935 (1034)
T ss_pred             hhhhhcCccccccc
Confidence            78899999999874

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-34  Score=233.54  Aligned_cols=207  Identities=18%  Similarity=0.241  Sum_probs=165.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC----cchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV----PISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|..++.||.|+||.||-|++.. +  .+.||||....+...    -..++.|+..|++++|||++.+    -.....|+
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~-n--~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWL  103 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVR-N--SEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWL  103 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccC-c--cceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHH
Confidence            36778899999999999999988 6  788999983333222    3478899999999999999987    23457889


Q ss_pred             EEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-------------
Q 036362           75 IFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-------------  137 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-------------  137 (246)
                      |||||- ||-.|++.-..    +..+..+..+.+.||.|||+++.||||||..|||+...| .+|+.             
T Consensus       104 VMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g-~VKLaDFGSAsi~~PAns  181 (948)
T KOG0577|consen  104 VMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG-LVKLADFGSASIMAPANS  181 (948)
T ss_pred             HHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC-eeeeccccchhhcCchhc
Confidence            999999 88888874322    333444444999999999999999999999999999666 33333             


Q ss_pred             -------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          138 -------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       138 -------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               ||||||++-.|+.-.++|.-..+....+.-|...- .|.-               
T Consensus       182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-sPtL---------------  245 (948)
T KOG0577|consen  182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPTL---------------  245 (948)
T ss_pred             ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-CCCC---------------
Confidence                                     49999999999999999987777777777666631 1110               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                               .  .+.+|..++.|+..||++-|..|||.+++|.|+|..-
T Consensus       246 ---------q--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  246 ---------Q--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR  283 (948)
T ss_pred             ---------C--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence                     0  1467899999999999999999999999999999764

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-33  Score=232.99  Aligned_cols=154  Identities=19%  Similarity=0.190  Sum_probs=126.4

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe------cC----CceE
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK------EN----DKLV   72 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~----~~~~   72 (246)
                      ...+.||+|+||.||+++++. +  |..||+|.  ........+++.+|++++++++|+|||++      ..    ....
T Consensus        16 ~~~e~LG~Ga~g~V~rgrnke-t--G~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   16 EMDERLGKGAFGNVYRGRNKE-T--GRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             eehhhhcCCccceeeeecccc-c--ccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence            456789999999999999988 7  99999999  34456678899999999999999999998      12    4567


Q ss_pred             EEEEeccCcccHHHHHhhh-cccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           73 YQIFEYTGLLNLRKVIKNF-LDIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      .++||||.||||...+++. +-.++++..+     ++..||.|||++||+||||||.||++-...               
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            8999999999999999652 2234544433     899999999999999999999999975332               


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcc
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASE  161 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~  161 (246)
                                                 +...-.|.|||||++|+..+|..||.....
T Consensus       173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence                                       223345699999999999999999975443

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=2.5e-33  Score=226.71  Aligned_cols=235  Identities=24%  Similarity=0.341  Sum_probs=181.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC------CceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY------PLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~----~~~~~   71 (246)
                      ++|.+....|+|-|++|.+|.+.. .  ++.||||+....+.....-+.|+++|++|+.      -+++.+    ...++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~-r--~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQA-R--GQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccC-C--CCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            478999999999999999999987 6  7799999977777777888999999999962      356655    67899


Q ss_pred             EEEEEeccCcccHHHHHhhhcc-cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD-IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~-~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------  138 (246)
                      +|||+|.+. .+|..+++++.. .++.     .+..|++-||..|...||+|.||||.|||++......+++|       
T Consensus       509 LClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  509 LCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFA  587 (752)
T ss_pred             eEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence            999999999 999999988652 2333     33339999999999999999999999999997664455555       


Q ss_pred             ------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc--
Q 036362          139 ------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF--  186 (246)
Q Consensus       139 ------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  186 (246)
                                                    +||+||.+||+++|+..|++.++.+++....++-|..+.-+... ..+  
T Consensus       588 ~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK-gqF~d  666 (752)
T KOG0670|consen  588 SENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK-GQFKD  666 (752)
T ss_pred             ccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh-cchhh
Confidence                                          89999999999999999999999999999998888765443221 111  


Q ss_pred             --cccc-----------------cccCCCCc-chhhhhC---C-------CCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 --FPFI-----------------YCYEESEP-KDLAILL---P-------DLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 --~~~~-----------------~~~~~~~~-~~~~~~~---~-------~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                        ++..                 .......+ .++....   +       ..-..+.+|+.+||..||++|.|+.++|.|
T Consensus       667 qHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  667 QHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             hhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence              1100                 00111111 1111111   1       123568999999999999999999999999


Q ss_pred             CCCcC
Q 036362          237 HYYRD  241 (246)
Q Consensus       237 ~~~~~  241 (246)
                      |||.+
T Consensus       747 pFi~~  751 (752)
T KOG0670|consen  747 PFITE  751 (752)
T ss_pred             CcccC
Confidence            99975

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.98  E-value=5.6e-33  Score=228.46  Aligned_cols=203  Identities=15%  Similarity=0.216  Sum_probs=160.9

Q ss_pred             CccceeeeCCccceEEEEEEEccccc-chhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +..+.++||+|+||.||+|+.+.... ....||+|...    ........+.+|.+++++++||||+++    .....++
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~  237 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM  237 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence            45677899999999999998876321 01228899833    234446688999999999999999999    6788999


Q ss_pred             EEEeccCcccHHHHHhhhcc-cccch---HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-IINNP---KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-~~~~~---~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      +|||+|+||+|.++++++.. -...+   +..+.+.||+|||+++++||||-..|+|++.++ .+|++            
T Consensus       238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~-~vKISDFGLs~~~~~~~  316 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG-VVKISDFGLSRAGSQYV  316 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC-eEEeCccccccCCccee
Confidence            99999999999999998753 22222   223999999999999999999999999999655 23444            


Q ss_pred             ---------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHh-hCCCCcCcCCCCCCccc
Q 036362          138 ---------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRL-MGEPSEETLPGVTTFFP  188 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  188 (246)
                                                 |+|||||+++|+++ |..||.+.........+... +..+.            
T Consensus       317 ~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~------------  384 (474)
T KOG0194|consen  317 MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI------------  384 (474)
T ss_pred             eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC------------
Confidence                                       49999999999998 88899998887777777442 11111            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                      +...+.++..++.+|+..||+.|||+.++.
T Consensus       385 ----------------~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~  414 (474)
T KOG0194|consen  385 ----------------PSKTPKELAKVMKQCWKKDPEDRPTMSTIK  414 (474)
T ss_pred             ----------------CCCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence                            135678899999999999999999999875

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=3.2e-34  Score=215.70  Aligned_cols=233  Identities=26%  Similarity=0.331  Sum_probs=176.3

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe---------cCCceE
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK---------ENDKLV   72 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~~~   72 (246)
                      +=.+.||.|+||.||.+++.. .  ++.+++|..   ..+-....++-+|+.+|...+|.|+...         ..-...
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPR-d--grrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPR-S--GKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             CCCCcccccceeEEEeccCCC-C--ccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            445789999999999999987 6  889999882   2223335678899999999999999875         223567


Q ss_pred             EEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           73 YQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      |+++|.++ -||.+.|-.   .+....+....||++||+|||+.||.||||||.|.|++++- --|+             
T Consensus       133 YV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC-vLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  133 YVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-ILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc-eEEecccccccccchhh
Confidence            88899998 888887733   33455666777999999999999999999999999999543 2333             


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||.|||+.|++-.+-.|...+..+++..+.+++|.|..+.+...+....
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk  290 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK  290 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence                                        4599999999999999999999999999999999999998875543222110


Q ss_pred             cccccCCCCcchhhhhC-----CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILL-----PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      --.............+.     ..-..+..+++..+|.+||++|.+..+++.|++..+.
T Consensus       291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            00000000111111111     1234678999999999999999999999999998774

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.98  E-value=3.7e-32  Score=218.86  Aligned_cols=206  Identities=14%  Similarity=0.135  Sum_probs=149.9

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-chhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+..+.. ....+++|......  .....+.+|+.+++.++||||+++   ......+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            578899999999999999999866221 11246777632211  123367889999999999999998   334457799


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      ++|+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++               
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~-~~kL~Dfg~~~~~~~~~~~  165 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-HVKITDFGLARLLEGDEKE  165 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC-ceEEccccccccccCcccc
Confidence            999999999999865321    12233444999999999999999999999999998655 1222               


Q ss_pred             --------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 --------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                +|+|||||+++++++ |..||.+...... .........+              
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~--------------  230 (303)
T cd05110         166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLEKGERL--------------  230 (303)
T ss_pred             cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHCCCCC--------------
Confidence                                      459999999999997 8888876543322 2222210000              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                   ...+..+.++.+++.+|+..||+.|||+.++++.
T Consensus       231 -------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         231 -------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             -------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                         0013467789999999999999999999998753

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=4.9e-32  Score=214.19  Aligned_cols=209  Identities=18%  Similarity=0.242  Sum_probs=171.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      .+|..+.+||+|+||+|-+|..+. +  .+.||||+.    .......+--..|-++|.... -|.++.+    ..-+.+
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkg-t--dELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL  425 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKG-T--DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL  425 (683)
T ss_pred             cccceEEEeccCccceeeeecccC-c--chhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence            478899999999999999999988 6  888999982    222334455566777777664 5667766    556789


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      |.||||+.||+|.-.+++..   +..+..+++.|+-||-+||++||++||||..|||++.+| .+++             
T Consensus       426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG-HiKi~DFGmcKEni~~~  504 (683)
T KOG0696|consen  426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENIFDG  504 (683)
T ss_pred             eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC-ceEeeecccccccccCC
Confidence            99999999999998887743   455555666999999999999999999999999999888 3333             


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                .|.||+|++++||+.|.+||.+.++.+.++.|.+.-                  
T Consensus       505 ~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn------------------  566 (683)
T KOG0696|consen  505 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN------------------  566 (683)
T ss_pred             cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc------------------
Confidence                                      348999999999999999999999999988888731                  


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-----HHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-----NDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-----~e~l~h~~~~~~~  243 (246)
                         .        ..+..+|.++.++....|++.|.+|+.+     .++-.||||..+.
T Consensus       567 ---v--------syPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  567 ---V--------SYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             ---C--------cCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence               0        1126789999999999999999999854     6799999998763

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.98  E-value=8.2e-32  Score=211.85  Aligned_cols=197  Identities=16%  Similarity=0.157  Sum_probs=142.1

Q ss_pred             eeeCCccceEEEEEEEccccc-------chhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            8 ELIGRGKYGSFYKCEEDVAEN-------AYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +.||+|+||.||+|....+..       ....+++|...........+.+|+.+++.++||||+++    .. ...++||
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            478999999999999876220       01246677633333336788899999999999999987    23 6789999


Q ss_pred             eccCcccHHHHHhhhcc-c---ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC------eee-----------
Q 036362           77 EYTGLLNLRKVIKNFLD-I---INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY------TVK-----------  135 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~-~---~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~------~~~-----------  135 (246)
                      ||+++++|.+++..... .   ....+..||+.||.|||++||+||||||+||+++.++.      ..+           
T Consensus        80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~  159 (259)
T cd05037          80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL  159 (259)
T ss_pred             EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence            99999999999876431 1   11222339999999999999999999999999986540      011           


Q ss_pred             --------------------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          136 --------------------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       136 --------------------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                .+|+||+||+++++++ |..||..............    ..            
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~----~~------------  223 (259)
T cd05037         160 SREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD----QH------------  223 (259)
T ss_pred             cccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc----CC------------
Confidence                                      2569999999999998 5677765432211111110    00            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                    .........+.+++.+||..+|.+|||+.++++
T Consensus       224 --------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         224 --------------RLPMPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             --------------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence                          000112378999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.98  E-value=3.4e-32  Score=238.08  Aligned_cols=210  Identities=21%  Similarity=0.318  Sum_probs=154.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe------------
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK------------   66 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~------------   66 (246)
                      +.+|+.++.||+||||.||+|+++- .  +..||||....  +......+.+|+..+.+|+|||||++            
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKl-D--Gr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKL-D--GREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecc-c--chhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            3578899999999999999999998 7  89999999322  45567789999999999999999885            


Q ss_pred             -------------------------------------------------c---------------------CC-------
Q 036362           67 -------------------------------------------------E---------------------ND-------   69 (246)
Q Consensus        67 -------------------------------------------------~---------------------~~-------   69 (246)
                                                                       .                     ++       
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                             0                     00       


Q ss_pred             ----------------------------------ceEEEEEeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHh
Q 036362           70 ----------------------------------KLVYQIFEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYH  111 (246)
Q Consensus        70 ----------------------------------~~~~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH  111 (246)
                                                        ..+||=||||+..++.+++..+...    ..-...++|+.||.|+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence                                              3467889999966667777654322    22223349999999999


Q ss_pred             hCceeeccCCCCCeEEecCC-----------------------------------------------------------C
Q 036362          112 SNRCLHGRLNPYQALINLSD-----------------------------------------------------------Y  132 (246)
Q Consensus       112 ~~~i~H~Dikp~Nil~~~~~-----------------------------------------------------------~  132 (246)
                      ++|||||||||.||+++.++                                                           .
T Consensus       715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~  794 (1351)
T KOG1035|consen  715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK  794 (1351)
T ss_pred             hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence            99999999999999999766                                                           1


Q ss_pred             eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHH
Q 036362          133 TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAG  212 (246)
Q Consensus       133 ~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (246)
                      ....+||||+|++++||+.   ||...-+....-...+....|.+                        ...+.+.-+.-
T Consensus       795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~------------------------~~f~~~~~~~e  847 (1351)
T KOG1035|consen  795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP------------------------ADFFDPEHPEE  847 (1351)
T ss_pred             ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC------------------------cccccccchHH
Confidence            2234569999999999996   56544333222222221111111                        01112233556


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          213 VDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       213 ~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                      ..+|++||+.||.+||||.|+|++.||-
T Consensus       848 ~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  848 ASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             HHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            7899999999999999999999999986

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=6.7e-32  Score=237.20  Aligned_cols=126  Identities=18%  Similarity=0.285  Sum_probs=103.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|+++++||+|+||.||+|.+.. .  +..||+|+....    ......+.+|+.++..++|+||+++    ....+.
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~-~--~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~   79 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKN-N--SKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNV   79 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC-C--CcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEE
Confidence            5789999999999999999999986 5  778999983221    1123578889999999999999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEec
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL  129 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~  129 (246)
                      |+||||+.|++|.+++....   ......++.||+.||.|||++||+||||||+|||++.
T Consensus        80 ~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~  139 (669)
T cd05610          80 YLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN  139 (669)
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC
Confidence            99999999999999986532   2223344459999999999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=1.2e-31  Score=225.77  Aligned_cols=224  Identities=15%  Similarity=0.189  Sum_probs=144.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc-------------cchhhhhhccccCC-CC--------------Ccchhhhhhc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE-------------NAYQTVLLKADIIP-DG--------------VPISILTKIS   53 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~-------------~~~~~vaiK~~~~~-~~--------------~~~~~~~E~~   53 (246)
                      ++|++.++||+|+||.||+|....+.             ..+..||+|..... ..              ..+....|+.
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~  224 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY  224 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence            68999999999999999999752211             11346888872211 11              1223344666


Q ss_pred             ccccCCCCceE-----Ee------------cCCceEEEEEeccCcccHHHHHhhhccc----------------------
Q 036362           54 PLKEMDYPLIF-----RK------------ENDKLVYQIFEYTGLLNLRKVIKNFLDI----------------------   94 (246)
Q Consensus        54 ~l~~l~~~~i~-----~~------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~----------------------   94 (246)
                      ++.+++|.+++     ++            ...+..++|+||+++++|.+++......                      
T Consensus       225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~  304 (507)
T PLN03224        225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD  304 (507)
T ss_pred             HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence            67777665542     22            1235689999999999999988642100                      


Q ss_pred             -----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------------Cee-----
Q 036362           95 -----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------------YTV-----  134 (246)
Q Consensus        95 -----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------------~~~-----  134 (246)
                           ....+..|++.+|.|||+++|+||||||+|||++.++                              ..|     
T Consensus       305 ~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        305 KRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence                 0112334999999999999999999999999998655                              001     


Q ss_pred             --------------------------eEEEeehhhHHHHHHhhCCC-CCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          135 --------------------------KIARLISVGCIFAEMVIQEP-LSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       135 --------------------------~~~Di~slG~i~~~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                ...|+||+||++++|+++.. ||......   .............|......  
T Consensus       385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f---~~~~~~~~~~~~~~r~~~~~--  459 (507)
T PLN03224        385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLF---NTELRQYDNDLNRWRMYKGQ--  459 (507)
T ss_pred             CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhh---hhHHhhccchHHHHHhhccc--
Confidence                                      13599999999999999865 55432111   00111000000000000000  


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCC---CCCCCHHHHhcCCCCcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNP---KERITVNDALNHHYYRD  241 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp---~~R~s~~e~l~h~~~~~  241 (246)
                                ... ...+...++..+||+.+||..+|   .+|+|++|+|+||||..
T Consensus       460 ----------~~~-~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        460 ----------KYD-FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             ----------CCC-cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence                      000 01235678999999999999876   68999999999999964

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.97  E-value=3.5e-31  Score=209.54  Aligned_cols=204  Identities=19%  Similarity=0.260  Sum_probs=151.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc-----------CCCCCcchhhhhhccccc-CCCCceEEe----
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----------IPDGVPISILTKISPLKE-MDYPLIFRK----   66 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----------~~~~~~~~~~~E~~~l~~-l~~~~i~~~----   66 (246)
                      .|++.+.||+|+||.||++....++  ++.+++|...           ........+.+|+.++.+ ++||||+++    
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~--~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   78 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNG--QNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF   78 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCC--CceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence            4899999999999999999987644  6678888621           111223446778887765 689999998    


Q ss_pred             cCCceEEEEEeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCee----
Q 036362           67 ENDKLVYQIFEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTV----  134 (246)
Q Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~----  134 (246)
                      ..++..+++|||+++++|.+++....  ...+.     ....|++.||.|||+ .|++||||||+||+++.++ ..    
T Consensus        79 ~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~-~~~l~d  157 (269)
T cd08528          79 LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD-KVTITD  157 (269)
T ss_pred             ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC-cEEEec
Confidence            56789999999999999998875421  12222     233399999999996 7899999999999998766 11    


Q ss_pred             ----------------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          135 ----------------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       135 ----------------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                        ..+|+||+|+++++|++|..||...........+......+.    
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----  233 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL----  233 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC----
Confidence                                              235699999999999999999976554433332222110000    


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                             .....++++.+++.+||+.||+.|||+.|+.++
T Consensus       234 -----------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         234 -----------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             -----------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence                                   012467899999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=228.27  Aligned_cols=212  Identities=20%  Similarity=0.251  Sum_probs=171.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe---------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK---------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~---------~~~~~   71 (246)
                      +.++|.++||+|.+|+||+++... .  ++..|+|+........+.+..|.++++.. +|||++.+         ..++.
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~-~--~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVK-T--GQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeee-c--CceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            468899999999999999999988 6  77888888666666778899999999988 69999887         56789


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      +|+|||||+|||..|++++.-...+.+..+     .++.||.+||.+.++|||||-.|||++.++               
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds  175 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS  175 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence            999999999999999998765455554433     899999999999999999999999999777               


Q ss_pred             --------------CeeeE--------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          132 --------------YTVKI--------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       132 --------------~~~~~--------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                    ++|++              +|+||||++..||.-|.+|+.+.-....   ++.....|++      
T Consensus       176 T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra---LF~IpRNPPP------  246 (953)
T KOG0587|consen  176 TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA---LFLIPRNPPP------  246 (953)
T ss_pred             ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---hccCCCCCCc------
Confidence                          22222              2399999999999999999876544332   2222111211      


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                      . ...+..+++++.|||..||.+|-.+||+..++|+|||+++-
T Consensus       247 ----------------k-Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  247 ----------------K-LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             ----------------c-ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence                            1 11135689999999999999999999999999999999854

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=6e-32  Score=229.95  Aligned_cols=203  Identities=18%  Similarity=0.166  Sum_probs=163.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccc--cchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +.+..+.||+|+||+||+|+...-.  +....||||...  ........|.+|++++..++|||||++    ..++.+++
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M  566 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM  566 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence            4467789999999999999875411  235689999832  223357799999999999999999998    78899999


Q ss_pred             EEeccCcccHHHHHhhhccc--------c----cch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE
Q 036362           75 IFEYTGLLNLRKVIKNFLDI--------I----NNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA  137 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~--------~----~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~  137 (246)
                      |+||+..|||..++...+..        .    +..     +..||+.|..||-++.+|||||-..|.||+ ++..+|++
T Consensus       567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg-e~l~VKIs  645 (774)
T KOG1026|consen  567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG-ENLVVKIS  645 (774)
T ss_pred             EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec-cceEEEec
Confidence            99999999999999543211        1    211     223999999999999999999999999999 56667776


Q ss_pred             E-----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCC
Q 036362          138 R-----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       138 D-----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                      |                                         |||+||++||+++ |+.|+.+-.+.+.+..+....-  
T Consensus       646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l--  723 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL--  723 (774)
T ss_pred             ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc--
Confidence            6                                         9999999999998 9999988877776665555210  


Q ss_pred             CcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          176 SEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                                -.-+++++.++-+|+..||..+|++|||.+||-
T Consensus       724 --------------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  724 --------------------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             --------------------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence                                      111368999999999999999999999999974

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.97  E-value=4.8e-32  Score=221.55  Aligned_cols=193  Identities=23%  Similarity=0.242  Sum_probs=149.5

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      -++=||+|+-|.||+|+..+     +.||||.      ..+.-..+|..|++|+||||+.+    ...-.+|||||||..
T Consensus       128 ELeWlGSGaQGAVF~Grl~n-----etVAVKK------V~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~  196 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLHN-----ETVAVKK------VRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ  196 (904)
T ss_pred             hhhhhccCcccceeeeeccC-----ceehhHH------HhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence            35568999999999998854     4688886      22334457999999999999998    456688999999999


Q ss_pred             ccHHHHHhhhccc---ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------------
Q 036362           82 LNLRKVIKNFLDI---INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------------  138 (246)
Q Consensus        82 ~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------------  138 (246)
                      |.|..+++....-   .+..+..+|+.|..|||.++|||||||.=||||..+. .+|++|                    
T Consensus       197 GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d-~VKIsDFGTS~e~~~~STkMSFaGTV  275 (904)
T KOG4721|consen  197 GQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD-VVKISDFGTSKELSDKSTKMSFAGTV  275 (904)
T ss_pred             ccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc-eEEeccccchHhhhhhhhhhhhhhhH
Confidence            9999999865321   2222333999999999999999999999999999766 445554                    


Q ss_pred             ------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       139 ------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                                        ||||||++|||++|..||.+.+....+.      |...       ..              -
T Consensus       276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw------GVGs-------Ns--------------L  328 (904)
T KOG4721|consen  276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW------GVGS-------NS--------------L  328 (904)
T ss_pred             hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE------eccC-------Cc--------------c
Confidence                              9999999999999999998655432211      1100       00              0


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH  237 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~  237 (246)
                      .-..+..+++.++=|++.||...|..|||..++|.|=
T Consensus       329 ~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  329 HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence            1112357889999999999999999999999999983

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.97  E-value=1.6e-32  Score=216.73  Aligned_cols=240  Identities=21%  Similarity=0.291  Sum_probs=176.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~lv~   76 (246)
                      +.|.++++||.|.|++||++...........||+|. ......+.++.+|+++|..+. +.||+++    ..+++..+|+
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~-i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl  114 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKA-IYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL  114 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeee-cccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence            468899999999999999997755211167889997 445566788999999999995 8899988    6788999999


Q ss_pred             eccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------------  131 (246)
                      ||++..+..++....+...+..+.+.++.||.++|++|||||||||+|+|++...                         
T Consensus       115 p~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~  194 (418)
T KOG1167|consen  115 PYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRS  194 (418)
T ss_pred             cccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhh
Confidence            9999999999998887778888899999999999999999999999999998665                         


Q ss_pred             -----------------------------------------------------------CeeeEEEeehhhHHHHHHhhC
Q 036362          132 -----------------------------------------------------------YTVKIARLISVGCIFAEMVIQ  152 (246)
Q Consensus       132 -----------------------------------------------------------~~~~~~Di~slG~i~~~l~~g  152 (246)
                                                                                 .....+|+||.|+|+.-++++
T Consensus       195 ~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~  274 (418)
T KOG1167|consen  195 YSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSR  274 (418)
T ss_pred             hhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcc
Confidence                                                                       122235699999999999999


Q ss_pred             CCCCCC-CcchHHHHHHHHhhCCCCcC----------cCC--CCCCccccccccCCC------C-cc--hhhhhC-CCCC
Q 036362          153 EPLSED-ASESRERISIFRLMGEPSEE----------TLP--GVTTFFPFIYCYEES------E-PK--DLAILL-PDLE  209 (246)
Q Consensus       153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~------~-~~--~~~~~~-~~~~  209 (246)
                      +.||-. .++...+..+....|...-.          .|.  .+...+.....+...      + ..  .....+ ...+
T Consensus       275 ~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~  354 (418)
T KOG1167|consen  275 RYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFP  354 (418)
T ss_pred             ccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccccccc
Confidence            988653 44444444444444332111          111  111111111111000      0 00  111222 2345


Q ss_pred             hHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          210 PAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       210 ~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ..+.||+.+||+.||.+|.||+|+|.||||.+.
T Consensus       355 ~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  355 ALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             HHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence            689999999999999999999999999999864

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=4.5e-33  Score=208.33  Aligned_cols=211  Identities=16%  Similarity=0.187  Sum_probs=161.3

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      .+-+..||.|+||+|++..++. +  ++.+|+|..  ........+++.|.+...+- +.||||++    ...+..|+.|
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~-s--g~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCM  142 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKP-S--GKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICM  142 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCc-c--CcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeH
Confidence            4456789999999999999987 6  899999982  22334567888888876665 69999998    5678899999


Q ss_pred             eccCcccHHHHHhhh--------cccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeeeEEE---------
Q 036362           77 EYTGLLNLRKVIKNF--------LDIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVKIAR---------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~--------~~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~~~D---------  138 (246)
                      |.++ .||+.+.+..        ++..+..+++..+.||.||.+ .+|+||||||+|||++..| ..|++|         
T Consensus       143 ELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  143 ELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-DVKLCDFGICGQLVD  220 (361)
T ss_pred             HHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC-CEeeecccchHhHHH
Confidence            9999 9998776431        133334444488999999996 5899999999999999877 555555         


Q ss_pred             -------------------------------eehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 -------------------------------LISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 -------------------------------i~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                     +||||++++|+.+|..|+++.+. .+|+..+..  |.|+-...+.    
T Consensus       221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l~~~~----  294 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPILLFDK----  294 (361)
T ss_pred             HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCeecCcc----
Confidence                                           99999999999999999987654 233333322  3332211100    


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                       .--..+.++..|+.-||.+|-+.||+..+++.+||+.-.
T Consensus       295 -----------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  295 -----------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             -----------------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence                             002478999999999999999999999999999998753

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=1.5e-30  Score=208.57  Aligned_cols=209  Identities=13%  Similarity=0.179  Sum_probs=138.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC------------cchhhhhhcccccCCCCceEEe---
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV------------PISILTKISPLKEMDYPLIFRK---   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~E~~~l~~l~~~~i~~~---   66 (246)
                      ++|++.++||+|+||.||+|.+..+......+++|........            ......+...+..++|++++.+   
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            4799999999999999999998663212345566652111111            0011222334556779988876   


Q ss_pred             -----cCCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---
Q 036362           67 -----ENDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---  135 (246)
Q Consensus        67 -----~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---  135 (246)
                           ......+++++++. .++.+.+....   +..+..++.|++.||.|||++||+||||||+|||++.++ .++   
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~-~~~l~D  169 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN-RGYIID  169 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-cEEEEE
Confidence                 11124578888877 67766665422   223334555999999999999999999999999998554 122   


Q ss_pred             -------------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHH--
Q 036362          136 -------------------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFR--  170 (246)
Q Consensus       136 -------------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--  170 (246)
                                                                 .+|+||+||++++|++|..||..............  
T Consensus       170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~  249 (294)
T PHA02882        170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCD  249 (294)
T ss_pred             cCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHH
Confidence                                                       24699999999999999999987643222111111  


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ......                  ..     ....+..++++.++++.|++.+|.+||+..++++
T Consensus       250 ~~~~~~------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        250 FIKRLH------------------EG-----KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHhh------------------hh-----hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            000000                  00     0012456889999999999999999999999874

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-30  Score=229.49  Aligned_cols=204  Identities=14%  Similarity=0.179  Sum_probs=162.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccc--hhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENA--YQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~--~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ..++.+.||+|+||.||.|........  ...||+|.  ...+......+++|..+|++++||||+++    -+....+|
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i  772 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI  772 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence            346788999999999999988763311  22477777  45556677899999999999999999998    45788999


Q ss_pred             EEeccCcccHHHHHhhhc-----ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------
Q 036362           75 IFEYTGLLNLRKVIKNFL-----DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~-----~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------  136 (246)
                      ++||+.||||.+++++..     ...+.     ...+||++|.+||+++++|||||...|+|++... ..|+        
T Consensus       773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r-~VKIaDFGlArD  851 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR-VVKIADFGLARD  851 (1025)
T ss_pred             EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC-cEEEcccchhHh
Confidence            999999999999998752     11121     2223999999999999999999999999999664 3444        


Q ss_pred             ---------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          137 ---------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       137 ---------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                       +|+|||||++||+++ |..||...++.+.+....+. |         
T Consensus       852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-g---------  921 (1025)
T KOG1095|consen  852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-G---------  921 (1025)
T ss_pred             hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC-C---------
Confidence                                             449999999999998 89999988877665544331 1         


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                        ..+.++.+++.+-+++..||+.+|+.||+...+++
T Consensus       922 ------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  922 ------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence                              11113578999999999999999999999999886

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.1e-30  Score=210.08  Aligned_cols=215  Identities=19%  Similarity=0.208  Sum_probs=147.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC-cchhhhhhcccccCCCCceEEe----cCCc-eEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV-PISILTKISPLKEMDYPLIFRK----ENDK-LVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~----~~~~-~~~lv   75 (246)
                      ++|.-...||+|+||.||+|...+    +..||||........ ..++.+|+.++.+++|||++++    .+.+ ..+||
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~----~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD----GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC----CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence            356667899999999999999877    568999974333333 5669999999999999999998    3444 59999


Q ss_pred             EeccCcccHHHHHhhhcccccchHHH-----HHHHHHHHHhhC---ceeeccCCCCCeEEecCC----------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNPKTA-----KILRVLSYYHSN---RCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH~~---~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      +||+++|+|.+.+.......+.+..+     ++++||+|||+.   .|+||||||+|||+|.+.                
T Consensus       151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~  230 (361)
T KOG1187|consen  151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG  230 (361)
T ss_pred             EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence            99999999999987643213344333     999999999985   499999999999999433                


Q ss_pred             -----------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCc---chHHHHHHHHhhCCC-CcCc-CCCC
Q 036362          132 -----------------------YTVKIARLISVGCIFAEMVIQEPLSEDAS---ESRERISIFRLMGEP-SEET-LPGV  183 (246)
Q Consensus       132 -----------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~---~~~~~~~~~~~~~~~-~~~~-~~~~  183 (246)
                                             ...+.+|+||||+++.|+++|+.+.....   +.............. ..+. .+.+
T Consensus       231 ~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l  310 (361)
T KOG1187|consen  231 DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRL  310 (361)
T ss_pred             ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCc
Confidence                                   01123559999999999999997765432   111111111111111 0000 0000


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ..        .....       ...-..+..+..+|++.+|..||++.|+++
T Consensus       311 ~~--------~~~~~-------~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  311 KE--------GEYPD-------EKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             cC--------CCCCh-------HHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            00        00000       011234678889999999999999999753

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=224.21  Aligned_cols=203  Identities=19%  Similarity=0.176  Sum_probs=174.0

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ..|.++||.|.||.|+.|+.+..++-...||||.  ....+.....|+.|..||.+.+||||+++    ...+..-||.|
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE  710 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE  710 (996)
T ss_pred             eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence            4688999999999999999876444456889998  56677788899999999999999999999    55678889999


Q ss_pred             ccCcccHHHHHhhhcccccchHH-----HHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNPKT-----AKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~-----~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------  138 (246)
                      |+++|+|+.++.++.. .+..+.     +.|+.|.+||-++|+|||||-..|||+|. +.-.|++|              
T Consensus       711 yMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs-nLvCKVsDFGLSRvledd~~~~  788 (996)
T KOG0196|consen  711 YMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS-NLVCKVSDFGLSRVLEDDPEAA  788 (996)
T ss_pred             hhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc-ceEEEeccccceeecccCCCcc
Confidence            9999999999988653 344433     38999999999999999999999999994 44556655              


Q ss_pred             ----------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 ----------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  +||+|+++||.++ |..||.+.++.+.+..+.+.+.-|++            
T Consensus       789 ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP------------  856 (996)
T KOG0196|consen  789 YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP------------  856 (996)
T ss_pred             ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC------------
Confidence                                        9999999999887 99999999998899999987766654            


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                      -+++..+-.|+..||++|..+||+..+|+++
T Consensus       857 ----------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  857 ----------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             ----------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence                            5789999999999999999999999998753

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-31  Score=211.39  Aligned_cols=211  Identities=20%  Similarity=0.266  Sum_probs=165.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc--------ccCCCCCcchhhhhhcccccCCCCceEEe-----cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--------DIIPDGVPISILTKISPLKEMDYPLIFRK-----EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--------~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~   68 (246)
                      ++|-++.+||+|+|+.||+|.+.. .  +..||+|+        ............+|.+|-+.|+||.||++     -+
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~-E--qRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLT-E--QRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccc-h--hheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            478899999999999999998865 4  77899999        23444556788899999999999999998     46


Q ss_pred             CceEEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhC--ceeeccCCCCCeEEecCC--CeeeE-----
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSN--RCLHGRLNPYQALINLSD--YTVKI-----  136 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~--~i~H~Dikp~Nil~~~~~--~~~~~-----  136 (246)
                      .+.+|.|+|||+|.||+-|++.+   ++.....++.||++||.||.+.  .|||=||||.|||+-+..  ..+++     
T Consensus       540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL  619 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL  619 (775)
T ss_pred             cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence            78899999999999999999764   3556666677999999999976  699999999999987433  11222     


Q ss_pred             ---------------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchH-HH--HHH
Q 036362          137 ---------------------------------------------ARLISVGCIFAEMVIQEPLSEDASESR-ER--ISI  168 (246)
Q Consensus       137 ---------------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~-~~--~~~  168 (246)
                                                                   .|+||+|||+|..+.|+.||....... .+  ..|
T Consensus       620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI  699 (775)
T KOG1151|consen  620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI  699 (775)
T ss_pred             hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence                                                         359999999999999999997543211 11  111


Q ss_pred             HHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          169 FRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ...    ..             -.++.         -+.++.++++||++||++.-+.|....++-.||+|-.
T Consensus       700 lkA----tE-------------VqFP~---------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  700 LKA----TE-------------VQFPP---------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             hcc----ee-------------ccCCC---------CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            110    00             01111         1568999999999999999999999999999999853

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=1.2e-30  Score=239.20  Aligned_cols=215  Identities=18%  Similarity=0.211  Sum_probs=148.6

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      .|...+.||+|+||.||+|.... .  +..||+|......   .....|+..+++++||||+++    ...+..++||||
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~---~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIK-N--GMQFVVKEINDVN---SIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECC-C--CcEEEEEEccCCc---cccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            45667789999999999999866 5  7788999732221   223456889999999999998    556788999999


Q ss_pred             cCcccHHHHHhhhcccccchHHHHHHHHHHHHh---hCceeeccCCCCCeEEecCC------------------------
Q 036362           79 TGLLNLRKVIKNFLDIINNPKTAKILRVLSYYH---SNRCLHGRLNPYQALINLSD------------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH---~~~i~H~Dikp~Nil~~~~~------------------------  131 (246)
                      +++++|.+++..........++.|++.||.|||   +.+|+||||||+||+++.++                        
T Consensus       765 ~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y  844 (968)
T PLN00113        765 IEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAY  844 (968)
T ss_pred             CCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccc
Confidence            999999999976444444556669999999999   67999999999999998544                        


Q ss_pred             Ce---------eeEEEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHh-hCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          132 YT---------VKIARLISVGCIFAEMVIQEPLSEDASES-RERISIFRL-MGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       132 ~~---------~~~~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                      .+         ...+|+|||||+++||++|+.||...... .......+. ........+..        ........  
T Consensus       845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--  914 (968)
T PLN00113        845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWID--------PSIRGDVS--  914 (968)
T ss_pred             cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeC--------ccccCCCC--
Confidence            11         22478999999999999999998542211 011111110 00000000000        00000000  


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                         .......++.+++.+|++.||++|||+.|+++.
T Consensus       915 ---~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        915 ---VNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             ---ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence               001122467889999999999999999999864

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-30  Score=220.23  Aligned_cols=199  Identities=26%  Similarity=0.408  Sum_probs=147.7

Q ss_pred             eeeeCCccce-EEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEeccC
Q 036362            7 VELIGRGKYG-SFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFEYTG   80 (246)
Q Consensus         7 ~~~lg~G~~g-~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e~~~   80 (246)
                      .+.+|.|+-| .||+|...     ++.||+|.  .........++|+..|+.- +||||+++    .++.+.||..|.|.
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye-----~R~VAVKr--ll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYE-----GREVAVKR--LLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             HHHcccCCCCcEEEEEeeC-----CceehHHH--HhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            3567899876 58999874     45899998  3344556789999999988 59999998    66789999999999


Q ss_pred             cccHHHHHhhh-cccc----cchHHH--HHHHHHHHHhhCceeeccCCCCCeEEecC---C-CeeeE-------------
Q 036362           81 LLNLRKVIKNF-LDII----NNPKTA--KILRVLSYYHSNRCLHGRLNPYQALINLS---D-YTVKI-------------  136 (246)
Q Consensus        81 ~~~L~~~~~~~-~~~~----~~~~~~--qil~~L~~lH~~~i~H~Dikp~Nil~~~~---~-~~~~~-------------  136 (246)
                       .+|.+++... .+..    ...+..  |+++||++||+.+||||||||+||||+..   + ....+             
T Consensus       587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~  665 (903)
T KOG1027|consen  587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK  665 (903)
T ss_pred             -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence             9999999773 1111    111222  99999999999999999999999999873   3 22333             


Q ss_pred             -----------------------------EEeehhhHHHHHHhhC-CCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                   +||+|+||++++.++| ..||.+.-+.+.  .|..  |..           
T Consensus       666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~--~~~-----------  730 (903)
T KOG1027|consen  666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILT--GNY-----------  730 (903)
T ss_pred             chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhc--Ccc-----------
Confidence                                         4599999999999985 889986543221  1111  000           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                   .+..+.+.-..++.|||.+|+.+||..||||.++|.||+|=+
T Consensus       731 -------------~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  731 -------------TLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             -------------ceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence                         000001111228999999999999999999999999999843

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.96  E-value=4.4e-30  Score=212.01  Aligned_cols=201  Identities=20%  Similarity=0.212  Sum_probs=157.5

Q ss_pred             ccceeeeCCccceEEEEEEEcccccch--hhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAY--QTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~--~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      .++.+.||.|-||.||.|.... .+-+  --||||.  ..+.....+.+++|..++++++||||+++   ......|+||
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~-~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~Wivm  469 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTD-PEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVM  469 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecc-cccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEE
Confidence            3466789999999999998865 3112  2567888  33555668899999999999999999998   6678899999


Q ss_pred             eccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------
Q 036362           77 EYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------  138 (246)
                      |.++-|.|..|++.+...    .+..+..||..||.|||++++|||||-..|||+.+.. ..|+.|              
T Consensus       470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~-CVKLaDFGLSR~~ed~~yYk  548 (974)
T KOG4257|consen  470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ-CVKLADFGLSRYLEDDAYYK  548 (974)
T ss_pred             ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc-eeeecccchhhhccccchhh
Confidence            999999999999875422    3333444999999999999999999999999998654 444544              


Q ss_pred             --------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 --------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                +|.||+.+||+++ |..||.+-.+.+.+-.+...                    
T Consensus       549 aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG--------------------  608 (974)
T KOG4257|consen  549 ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG--------------------  608 (974)
T ss_pred             ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC--------------------
Confidence                                      9999999999987 99999876554322211111                    


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                              .....++++++.+-.|+.+||.+||.+||+..++.
T Consensus       609 --------eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  609 --------ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             --------CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence                    11112378999999999999999999999988764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=1.6e-28  Score=190.80  Aligned_cols=198  Identities=25%  Similarity=0.329  Sum_probs=149.0

Q ss_pred             cceEEEEEEEcccccchhhhhhccccCCCCC--cchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCcccHHHH
Q 036362           14 KYGSFYKCEEDVAENAYQTVLLKADIIPDGV--PISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGLLNLRKV   87 (246)
Q Consensus        14 ~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~~~L~~~   87 (246)
                      +||.||+|.... +  +..+++|........  ...+.+|+..++.++|+||+++    ......++++|++++++|.++
T Consensus         1 ~~g~v~~~~~~~-~--~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   77 (244)
T smart00220        1 SFGKVYLARDKK-T--GKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL   77 (244)
T ss_pred             CceEEEEEEECC-C--CcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence            589999999977 5  778899983322222  5788999999999999999987    455789999999998899999


Q ss_pred             Hhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------------------------
Q 036362           88 IKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------------------------  131 (246)
Q Consensus        88 ~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------------------------  131 (246)
                      +.....   ........+++.+|.+||+.|++|+||+|.||+++.++                                 
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~  157 (244)
T smart00220       78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV  157 (244)
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence            876432   12222333999999999999999999999999998654                                 


Q ss_pred             ----CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCC
Q 036362          132 ----YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPD  207 (246)
Q Consensus       132 ----~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (246)
                          .....+|+||+|++++++++|..||..............   ......                      ......
T Consensus       158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~~  212 (244)
T smart00220      158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG---KPKPPF----------------------PPPEWK  212 (244)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh---ccCCCC----------------------cccccc
Confidence                011236799999999999999999976433332222222   110000                      000012


Q ss_pred             CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       208 ~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ++.++.+++.+||..+|..||++.++++||||
T Consensus       213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      213 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            77899999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.9e-29  Score=206.05  Aligned_cols=199  Identities=16%  Similarity=0.148  Sum_probs=164.8

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEecc
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~   79 (246)
                      .....+||.|-||.||.+.|+. .  ...||+|......-...+|+.|..+|+.++|||+|++    .-.-.+|||+||+
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKk-y--slTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM  345 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKK-Y--SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM  345 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeec-c--ceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence            4566789999999999999988 5  6688999876777778899999999999999999998    3455799999999


Q ss_pred             CcccHHHHHhhhcccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------------
Q 036362           80 GLLNLRKVIKNFLDIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------------  137 (246)
Q Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------------  137 (246)
                      ..|+|.+|+.+.+...+...++     ||.+|..||..+++|||||-..|.|+..+. ..|++                 
T Consensus       346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh-iVKvADFGLsRlMtgDTYTAHA  424 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-IVKVADFGLSRLMTGDTYTAHA  424 (1157)
T ss_pred             cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc-eEEeeccchhhhhcCCceeccc
Confidence            9999999998766555554443     999999999999999999999999999655 44444                 


Q ss_pred             -----------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          138 -----------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       138 -----------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                             |+|+||+++||+.+ |..||.+.+-...+..+...+.                    
T Consensus       425 GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR--------------------  484 (1157)
T KOG4278|consen  425 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR--------------------  484 (1157)
T ss_pred             CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc--------------------
Confidence                                   49999999999987 8889998776555444444211                    


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                              ++.++++++.+-+|++.||..+|++||+..|+-
T Consensus       485 --------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  485 --------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             --------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence                    122368999999999999999999999999874

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=2.9e-29  Score=205.66  Aligned_cols=207  Identities=18%  Similarity=0.202  Sum_probs=161.8

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ...+.++||+|-||.|.+|....    ..+||+|.  ..........+.+|+++|.+++||||+.+    ..++.+++++
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg----~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEG----PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             heehhhhhcCcccceeEEEEecC----ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            45688999999999999998865    67899998  22333335789999999999999999998    5678999999


Q ss_pred             eccCcccHHHHHhhhcccc-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           77 EYTGLLNLRKVIKNFLDII-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ||+++|+|.+++..+-...     .-.+..||++|++||.+.++||||+.+.|+|++.+. ..|++|             
T Consensus       615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~-~iKiadfgmsR~lysg~yy  693 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF-TIKIADFGMSRNLYSGDYY  693 (807)
T ss_pred             HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc-cEEecCcccccccccCCce
Confidence            9999999999998753222     111233999999999999999999999999999654 555555             


Q ss_pred             ----------------------------eehhhHHHHHHhh--CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          139 ----------------------------LISVGCIFAEMVI--QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||+++||+++  ...||....+.+...........+....         
T Consensus       694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~---------  764 (807)
T KOG1094|consen  694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV---------  764 (807)
T ss_pred             eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce---------
Confidence                                        9999999999987  5678887666655555555433332211         


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  ....++-++.++-+++-+|+..|.++|||.+++..
T Consensus       765 ------------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  765 ------------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             ------------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence                        11123568899999999999999999999999843

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.4e-29  Score=192.58  Aligned_cols=209  Identities=16%  Similarity=0.244  Sum_probs=159.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      |++|.++++||.|+|++|-.++.+. +  .+.||+|+    .........=.+.|-.+.... +||+++-+    ...-.
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~-t--~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKK-T--DQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcc-c--ceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            6799999999999999999999988 4  55666665    233334444556677777766 69999988    45567


Q ss_pred             EEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      ++.|+||.+||+|.-.+++.   ++.....+...|.-||.|||++||++||+|..|||+|.+| ..|++|          
T Consensus       326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg-hikltdygmcke~l~~  404 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG-HIKLTDYGMCKEGLGP  404 (593)
T ss_pred             EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC-ceeecccchhhcCCCC
Confidence            89999999999998777653   2344555666999999999999999999999999999888 444444          


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCC--CcchH------HHHHHHHhhCCCCcCcCC
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSED--ASESR------ERISIFRLMGEPSEETLP  181 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~  181 (246)
                                                   .|++|++++||+.|+.||.-  .++.+      .++-+.+           
T Consensus       405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile-----------  473 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE-----------  473 (593)
T ss_pred             CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-----------
Confidence                                         79999999999999999962  11111      1121221           


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC------HHHHhcCCCCcCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT------VNDALNHHYYRDV  242 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s------~~e~l~h~~~~~~  242 (246)
                                        .....++.+|-.+..+++.-|.+||..|..      ..++-.|+||..+
T Consensus       474 ------------------kqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  474 ------------------KQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             ------------------hcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence                              111223567888889999999999999984      6789999999875

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=6.1e-29  Score=207.50  Aligned_cols=208  Identities=17%  Similarity=0.123  Sum_probs=163.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCC-CcchhhhhhcccccCCCCceEEe---cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDG-VPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~-~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e   77 (246)
                      +.++.++||+|.||+|++|.|+..+...-.||||.. ..... ....|++|+.+|.+|+|+|++++   +-+...-+|+|
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~E  190 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFE  190 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhh
Confidence            456788999999999999999874422336788872 22222 56789999999999999999998   44577889999


Q ss_pred             ccCcccHHHHHhhhccc-----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------
Q 036362           78 YTGLLNLRKVIKNFLDI-----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~-----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------  138 (246)
                      .+++|+|.+.+.+....     .+..+..||+.|+.||.++++||||+-..|+|+.. ...+|++|              
T Consensus       191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas-prtVKI~DFGLmRaLg~ned~Y  269 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS-PRTVKICDFGLMRALGENEDMY  269 (1039)
T ss_pred             hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc-cceeeeecccceeccCCCCcce
Confidence            99999999999773323     33344559999999999999999999999999985 33566666              


Q ss_pred             ----------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 ----------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  +|++||++||||+ |..||.+-.....+..+.+.-.                
T Consensus       270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er----------------  333 (1039)
T KOG0199|consen  270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER----------------  333 (1039)
T ss_pred             EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc----------------
Confidence                                        9999999999998 7889998887766555543111                


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                  -..++.+++++-+++..||+.+|++|||...|-+.-+.
T Consensus       334 ------------LpRPk~csedIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  334 ------------LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             ------------CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence                        11125789999999999999999999999988654433

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-29  Score=206.41  Aligned_cols=213  Identities=18%  Similarity=0.217  Sum_probs=158.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|+++.++|+|.||-||+++++. +  ++..|+|+ ..........+++||-+++..+|+||+.+    -.....+++|
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~-s--~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKR-S--GELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             cchhheeeecCCcccchhhhcccc-c--CchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            689999999999999999999988 6  78888888 44555567789999999999999999988    3467899999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      |||+||+|.+...-..   +..+.-..+..+.+|+|||++|-+|||||-.||+++..|                      
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks  171 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS  171 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence            9999999988764321   112222222888999999999999999999999999776                      


Q ss_pred             -------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          132 -------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       132 -------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                         ....++|+|++|+...|+---.+|.-.--....+..+...  .+.+               
T Consensus       172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS--~~qp---------------  234 (829)
T KOG0576|consen  172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS--GFQP---------------  234 (829)
T ss_pred             ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc--CCCC---------------
Confidence                               2334455899998888887655553222222111111110  0000               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                            +.+ .-....++.+.+|++.+|.++|++|||++.+|+|||...
T Consensus       235 ------p~l-kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  235 ------PTL-KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             ------Ccc-cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence                  000 011357899999999999999999999999999999865

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-29  Score=199.07  Aligned_cols=218  Identities=14%  Similarity=0.079  Sum_probs=146.6

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC--CCCceEEe--------cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM--DYPLIFRK--------ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l--~~~~i~~~--------~~~~~~   72 (246)
                      ...+.+.||+|.||.||+|++.     ++.||||++  +......+.+|.++++..  +|+||+.+        ..-.++
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wr-----Ge~VAVKiF--~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWR-----GEDVAVKIF--SSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             eeEEEEEecCccccceeecccc-----CCceEEEEe--cccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence            4578899999999999999994     668999994  445667889998888874  99999988        223689


Q ss_pred             EEEEeccCcccHHHHHhhhcc--cccchHHHHHHHHHHHHhhC--------ceeeccCCCCCeEEecCC-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD--IINNPKTAKILRVLSYYHSN--------RCLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~qil~~L~~lH~~--------~i~H~Dikp~Nil~~~~~-----------  131 (246)
                      +||.+|.+.|||.||+.++.-  ...-...+.+++||++||..        .|.|||||..|||+.+++           
T Consensus       285 wLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv  364 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  364 (513)
T ss_pred             EEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence            999999999999999988532  22233444999999999952        599999999999999888           


Q ss_pred             ----------------------CeeeE---------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCC
Q 036362          132 ----------------------YTVKI---------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       132 ----------------------~~~~~---------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                                            ++|++               +||||||.++||+.....- .+..+..+....--.-..
T Consensus       365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~-ggi~eey~~Pyyd~Vp~D  443 (513)
T KOG2052|consen  365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCES-GGIVEEYQLPYYDVVPSD  443 (513)
T ss_pred             EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhc-CCEehhhcCCcccCCCCC
Confidence                                  23333               3399999999999754311 110000011111111122


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                      |..+.+..+.....++...++....      ...-..+-.+++.||..+|..|.||-.+-
T Consensus       444 Ps~eeMrkVVCv~~~RP~ipnrW~s------~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  444 PSFEEMRKVVCVQKLRPNIPNRWKS------DPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             CCHHHHhcceeecccCCCCCccccc------CHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            3333333333333222222222111      01123466889999999999999987653

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-28  Score=184.64  Aligned_cols=214  Identities=17%  Similarity=0.193  Sum_probs=161.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe-----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK-----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~~~lv   75 (246)
                      +.|.|.+.||+|.||++-+|+++. +  +..+++|...........+.+|.+.--.| .|.||+.-     ...+.++.+
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~-s--~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQ-S--KTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccC-C--ceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            568999999999999999999987 6  88899998666666778999999877777 48999875     566788999


Q ss_pred             EeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEEE--------------
Q 036362           76 FEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIAR--------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~D--------------  138 (246)
                      +||++-|||.+-+....  +........|+++|+.|||++++||||||.+|||+-..+ ..+|++|              
T Consensus       101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~  180 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL  180 (378)
T ss_pred             eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhh
Confidence            99999999998886543  222333444999999999999999999999999976443 3455666              


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASESR-ERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 +|.||++++..++|++||....-.+ -+.....-.+.                
T Consensus       181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r----------------  244 (378)
T KOG1345|consen  181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR----------------  244 (378)
T ss_pred             hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc----------------
Confidence                                       9999999999999999998543222 12222221111                


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCC---CCHHHHhcCCCCc
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKER---ITVNDALNHHYYR  240 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R---~s~~e~l~h~~~~  240 (246)
                            ........++.+++.+..+.++-|+.+|.+|   .+++......|.+
T Consensus       245 ------k~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  245 ------KNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             ------cCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence                  1112233346789999999999999999999   5655555555543

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.5e-27  Score=199.99  Aligned_cols=201  Identities=18%  Similarity=0.207  Sum_probs=155.3

Q ss_pred             cceeeeCCccceEEEEEEEcccc-cchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~-~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      +..++||+|+||+||+|.+--.. ....+||+|+..  ........++.|...|.+++|||++++   .-....-||++|
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~  778 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL  778 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence            45678999999999999875311 235588888833  334447899999999999999999998   223347889999


Q ss_pred             cCcccHHHHHhhhcccccchHHH----HHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           79 TGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      +++|+|.++++.+....-...++    ||++|+.|||++.++||||-..|||+..-+ ..|+.|                
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~-hvkitdfgla~ll~~d~~ey~~  857 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN-HVKITDFGLAKLLAPDEKEYSA  857 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC-eEEEEecchhhccCcccccccc
Confidence            99999999998865443333333    999999999999999999999999998544 444444                


Q ss_pred             -------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 -------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               +|||||+.||+++ |..|+.+....+.-. .++. |.                  
T Consensus       858 ~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-lle~-ge------------------  917 (1177)
T KOG1025|consen  858 PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-LLEK-GE------------------  917 (1177)
T ss_pred             cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-HHhc-cc------------------
Confidence                                     9999999999998 888888766543322 2221 00                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                              .-..++.++-++..++.+||-.|+..||+++++.
T Consensus       918 --------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  918 --------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             --------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence                    0112367889999999999999999999999875

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=3.1e-28  Score=195.07  Aligned_cols=217  Identities=14%  Similarity=0.135  Sum_probs=149.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccccc--CCCCceEEe--------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKE--MDYPLIFRK--------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~--------~~~~~   71 (246)
                      +..++++.||+|.||.||+|...     ++.||||+  ......+.+++|-+|.+.  +.|+||+++        .....
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~-----~~~VAVKi--fp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD-----NRLVAVKI--FPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc-----CceeEEEe--cCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence            34568889999999999999875     45899999  344556677777666665  579999998        12457


Q ss_pred             EEEEEeccCcccHHHHHhhhccc--ccchHHHHHHHHHHHHhh---------CceeeccCCCCCeEEecCC---------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDI--INNPKTAKILRVLSYYHS---------NRCLHGRLNPYQALINLSD---------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~qil~~L~~lH~---------~~i~H~Dikp~Nil~~~~~---------  131 (246)
                      ++||++|.+.|+|.+|++.+...  .+..+...+++||+|||+         ..|+|||||..|||+.+|.         
T Consensus       283 ywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence            99999999999999999886422  222333389999999996         3699999999999999887         


Q ss_pred             -------------------------------------CeeeEEEeehhhHHHHHHhhCCCCCC-CCcchHHHHHHHHhhC
Q 036362          132 -------------------------------------YTVKIARLISVGCIFAEMVIQEPLSE-DASESRERISIFRLMG  173 (246)
Q Consensus       132 -------------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~-~~~~~~~~~~~~~~~~  173 (246)
                                                           .+.+.+||||+|.+++|++++...+. +....-+...-.+...
T Consensus       363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~  442 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN  442 (534)
T ss_pred             eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence                                                 12334569999999999999766543 2222223333333333


Q ss_pred             CCCcCcCCCCCCccccccccCCCCcchhhhhCCC--CChHHHHHHHHhhhcCCCCCCCHHHH
Q 036362          174 EPSEETLPGVTTFFPFIYCYEESEPKDLAILLPD--LEPAGVDLLQKMLRVNPKERITVNDA  233 (246)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~l~~dp~~R~s~~e~  233 (246)
                      .|+.+.+......        ++..+.+.+.|..  -...+.+.++.|+..||+.|+||.-+
T Consensus       443 hPt~e~mq~~VV~--------kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv  496 (534)
T KOG3653|consen  443 HPTLEEMQELVVR--------KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV  496 (534)
T ss_pred             CCCHHHHHHHHHh--------hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence            3433322221111        1111112222222  23568999999999999999998764

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.92  E-value=2.8e-25  Score=174.83  Aligned_cols=205  Identities=14%  Similarity=0.141  Sum_probs=160.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcc--cccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~--~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~   72 (246)
                      +++++...+-+|.||.||.|.+..  |....+.|.+|.  ...++.....++.|-..+..+.|||+..+     ++....
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P  363 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP  363 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence            356777888999999999996643  111245666777  45556667789999999999999999876     677888


Q ss_pred             EEEEeccCcccHHHHHhhhc------ccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---
Q 036362           73 YQIFEYTGLLNLRKVIKNFL------DIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---  138 (246)
                      ++++.+.+-|+|..++....      ...+....+     |+..|++|||++|++|.||-..|.+++ +....+++|   
T Consensus       364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId-d~LqVkltDsaL  442 (563)
T KOG1024|consen  364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID-DQLQVKLTDSAL  442 (563)
T ss_pred             eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh-hheeEEeccchh
Confidence            99999999999999997321      122222222     999999999999999999999999999 445666666   


Q ss_pred             --------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          139 --------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       139 --------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                            +||||+++|||++ |+.|+...+..++...+.+.+.-.    
T Consensus       443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRla----  518 (563)
T KOG1024|consen  443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLA----  518 (563)
T ss_pred             ccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceec----
Confidence                                                  9999999999998 899998888777666665521111    


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                              .+-++++++..++.-||..+|+.|||.+|+..
T Consensus       519 ------------------------QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  519 ------------------------QPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             ------------------------CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence                                    12478999999999999999999999999764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.92  E-value=1e-24  Score=165.56  Aligned_cols=127  Identities=26%  Similarity=0.387  Sum_probs=101.8

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCccc
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~~~   83 (246)
                      ||+|.+|.||++.... +  +..+++|.......  ....+.+|+..++.+.|++|+++    ......++++|++++++
T Consensus         1 l~~g~~~~v~~~~~~~-~--~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~   77 (215)
T cd00180           1 LGEGGFGTVYLARDKK-T--GKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS   77 (215)
T ss_pred             CCcCCceEEEEEEecC-C--CcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence            6899999999999976 5  77889998333222  24689999999999999999988    44478999999999999


Q ss_pred             HHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           84 LRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        84 L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      |.+++....    .........+++.+|.+||++|++|+||+|.||+++..+....++|+
T Consensus        78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~  137 (215)
T cd00180          78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADF  137 (215)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecC
Confidence            999987641    22223334499999999999999999999999999972336777775

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.92  E-value=2.6e-25  Score=161.19  Aligned_cols=162  Identities=20%  Similarity=0.274  Sum_probs=126.2

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      ..-+..||+|++|.|-+.++.. +  +...|+|..  ........+.++|+++.... .+|+++.+    ......++.|
T Consensus        48 L~~i~elGrGayG~vekmrh~~-s--g~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQ-S--GTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhcCCccchhhheeecc-C--CeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            3445679999999999998877 6  888899882  23344456788888877765 79999998    5667899999


Q ss_pred             eccCcccHHHHHhhhc-------ccccchHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCCCeeeE------------
Q 036362           77 EYTGLLNLRKVIKNFL-------DIINNPKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~-------~~~~~~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      |.++ .||+.+..+.-       +..+..++..+++||.|||++ .++|||+||+|||+|.+| ..|+            
T Consensus       125 E~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-qVKiCDFGIsG~L~dS  202 (282)
T KOG0984|consen  125 ELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-QVKICDFGISGYLVDS  202 (282)
T ss_pred             HHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC-cEEEcccccceeehhh
Confidence            9999 99988875522       334444555999999999986 899999999999999888 3333            


Q ss_pred             ------------------------------EEeehhhHHHHHHhhCCCCCCCCc-chHHHHHHHH
Q 036362          137 ------------------------------ARLISVGCIFAEMVIQEPLSEDAS-ESRERISIFR  170 (246)
Q Consensus       137 ------------------------------~Di~slG~i~~~l~~g~~~~~~~~-~~~~~~~~~~  170 (246)
                                                    +|+||||+++.||.+++.||.... +.+++..+.+
T Consensus       203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence                                          349999999999999999998654 3445554444

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.92  E-value=6.5e-26  Score=185.87  Aligned_cols=133  Identities=16%  Similarity=0.198  Sum_probs=108.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---------CCCcchhhhhhcccccCC---CCceEEe---
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---------DGVPISILTKISPLKEMD---YPLIFRK---   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~---~~~i~~~---   66 (246)
                      .+|..++.+|.|+||+|+.|.++. .  ...|++|.....         +...-.+.-||.||..++   |+||+++   
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~-n--~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKE-N--NYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             ccceeeeeccccccceEEEeeecc-c--ceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            479999999999999999999988 5  667778872222         222335566999999997   9999998   


Q ss_pred             -cCCceEEEEEecc-CcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE
Q 036362           67 -ENDKLVYQIFEYT-GLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus        67 -~~~~~~~lv~e~~-~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                       ++++++|++||-. +|.||+++|....   +...+.+..|++.|+++||++||||||||-+||.++.+| ..+++|
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g-~~klid  713 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG-FVKLID  713 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC-eEEEee
Confidence             8889999999974 5789999997543   445555666999999999999999999999999999877 666777

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=2.3e-24  Score=187.36  Aligned_cols=202  Identities=19%  Similarity=0.248  Sum_probs=152.1

Q ss_pred             cceeeeCCccceEEEEEEEccccc----chhhhhhccc--cCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAEN----AYQTVLLKAD--IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~----~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      .+.+.||+|+||+|++|.......    ....||+|..  .........+..|+.++..+ +|+||+.+    ..++..+
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~  378 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY  378 (609)
T ss_pred             cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence            566799999999999997543121    1457888882  23334567899999999999 59999988    4578999


Q ss_pred             EEEeccCcccHHHHHhhhc-------c--c-----ccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee
Q 036362           74 QIFEYTGLLNLRKVIKNFL-------D--I-----INNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV  134 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~-------~--~-----~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~  134 (246)
                      +|+||+..|+|.+++....       .  .     .+...     ..||+.|.+||++++++|||+-..|||+..+. ..
T Consensus       379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~-~~  457 (609)
T KOG0200|consen  379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK-VI  457 (609)
T ss_pred             EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC-EE
Confidence            9999999999999997654       0  0     12222     22999999999999999999999999999654 33


Q ss_pred             eE------------------------------------------EEeehhhHHHHHHhh-CCCCCCCCc-chHHHHHHHH
Q 036362          135 KI------------------------------------------ARLISVGCIFAEMVI-QEPLSEDAS-ESRERISIFR  170 (246)
Q Consensus       135 ~~------------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~-~~~~~~~~~~  170 (246)
                      ++                                          +|+||+|++++|+++ |..|+.+.. ..+....+.+
T Consensus       458 kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~  537 (609)
T KOG0200|consen  458 KIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKE  537 (609)
T ss_pred             EEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhc
Confidence            33                                          459999999999998 888998744 2222222222


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                        |.                          ..+.+..+++++-++++.|+..+|+.||+..++.+
T Consensus       538 --G~--------------------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  538 --GN--------------------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             --CC--------------------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence              11                          01112567899999999999999999999998753

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=8.7e-25  Score=188.13  Aligned_cols=219  Identities=20%  Similarity=0.243  Sum_probs=152.2

Q ss_pred             Cc-cceeeeCCccceEEEEEEEcccccchhhhhhcccc-------CCCCCcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            3 KY-RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-------IPDGVPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         3 ~y-~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-------~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      .| .-.+.+|.|++|.|+.+.... .  .+....|...       ........+..|+.+-..+.|+|++..    ....
T Consensus       318 ~y~~~~~~~g~ga~g~~~~~~~~~-~--~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~  394 (601)
T KOG0590|consen  318 KYGKPGRVLGSGAYGSVRIAKRRS-D--LKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID  394 (601)
T ss_pred             ccCCccceeeecccCceEEEEecC-C--CccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc
Confidence            35 456688999999888776654 2  2222222210       111111226668888888999999876    2223


Q ss_pred             eEEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ...-.||||++ ||..++...   ....+....-|++.||+|+|++||.|||+||+|+++...|                
T Consensus       395 ~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  395 GILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             cchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            33334999996 999998763   2344555556999999999999999999999999999886                


Q ss_pred             ---------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 ---------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 ---------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                 +.+...|+||.|+++..|.+|+.||......+...  ...             
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~~-------------  538 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KTN-------------  538 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch--hhh-------------
Confidence                                       34445559999999999999999997654332111  000             


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                           ..............++..++...+.++.+||+.||.+|.|+++|++.+||+++..|
T Consensus       539 -----~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c  594 (601)
T KOG0590|consen  539 -----NYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC  594 (601)
T ss_pred             -----ccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence                 00000111122233446788999999999999999999999999999999998765

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=1.2e-23  Score=170.74  Aligned_cols=132  Identities=10%  Similarity=0.013  Sum_probs=103.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC------CCCcchhhhhhcccccCCCCceEE-ecCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP------DGVPISILTKISPLKEMDYPLIFR-KENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~-~~~~~~~~   73 (246)
                      +++|++.+.||+|+||+||+|.+..++  +..+|+|.....      ......+.+|+++++.++|+|+++ +...+..+
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~   94 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDP--GTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDG   94 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCC--CeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcE
Confidence            368999999999999999999886534  566788872211      112456899999999999999884 43345689


Q ss_pred             EEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccC-CCCCeEEecCCCeeeEEEe
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRL-NPYQALINLSDYTVKIARL  139 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Di-kp~Nil~~~~~~~~~~~Di  139 (246)
                      +||||++|++|... ...   ....+..|++.||.|||++||+|||| ||+|||++.++ ..+++|+
T Consensus        95 LVmE~~~G~~L~~~-~~~---~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~-~ikLiDF  156 (365)
T PRK09188         95 LVRGWTEGVPLHLA-RPH---GDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG-EAAVIDF  156 (365)
T ss_pred             EEEEccCCCCHHHh-Ccc---chHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC-CEEEEEC
Confidence            99999999999632 211   12345669999999999999999999 99999998655 6888885

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.89  E-value=8.7e-24  Score=189.98  Aligned_cols=142  Identities=13%  Similarity=0.145  Sum_probs=99.9

Q ss_pred             ceEEEEEeccCcccHHHHHhhh----cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC---------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNF----LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS---------------  130 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~---------------  130 (246)
                      ..++.++|+++ ++|.+++...    .......++.||+.||.|||++||+||||||+|||++..               
T Consensus        53 ~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~  131 (793)
T PLN00181         53 DSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG  131 (793)
T ss_pred             chhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence            46778889887 8999999642    222334445599999999999999999999999999421               


Q ss_pred             -------------------------------------------------CCe---------eeEEEeehhhHHHHHHhhC
Q 036362          131 -------------------------------------------------DYT---------VKIARLISVGCIFAEMVIQ  152 (246)
Q Consensus       131 -------------------------------------------------~~~---------~~~~Di~slG~i~~~l~~g  152 (246)
                                                                       .++         ...+|+|||||+++||++|
T Consensus       132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~  211 (793)
T PLN00181        132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP  211 (793)
T ss_pred             ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence                                                             011         2235799999999999998


Q ss_pred             CCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHH
Q 036362          153 EPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVND  232 (246)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e  232 (246)
                      .+|+.....  ....+.... .|..                           .....+...+++.+||..||.+|||+.|
T Consensus       212 ~~~~~~~~~--~~~~~~~~~-~~~~---------------------------~~~~~~~~~~~~~~~L~~~P~~Rps~~e  261 (793)
T PLN00181        212 VSSREEKSR--TMSSLRHRV-LPPQ---------------------------ILLNWPKEASFCLWLLHPEPSCRPSMSE  261 (793)
T ss_pred             CCchhhHHH--HHHHHHHhh-cChh---------------------------hhhcCHHHHHHHHHhCCCChhhCcChHH
Confidence            877653211  111111100 0000                           0012345678999999999999999999


Q ss_pred             HhcCCCCcCC
Q 036362          233 ALNHHYYRDV  242 (246)
Q Consensus       233 ~l~h~~~~~~  242 (246)
                      +++||||.+.
T Consensus       262 il~h~~~~~~  271 (793)
T PLN00181        262 LLQSEFINEP  271 (793)
T ss_pred             Hhhchhhhhh
Confidence            9999999864

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.88  E-value=6.2e-23  Score=152.24  Aligned_cols=161  Identities=17%  Similarity=0.219  Sum_probs=125.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEe-cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRK-ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~-~~~~~~~lv~   76 (246)
                      ++|+++++||+|+||-+|.|.... +  ++.||||+. ++.....++..|..+.+.|++    |+|..+ .++.+-.+||
T Consensus        15 gky~lvrkiGsGSFGdIy~~~~i~-~--ge~VAiK~E-s~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   15 GKYKLVRKIGSGSFGDIYLGISIT-S--GEEVAIKLE-SSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             cceEEEEeecCCchhheeeeeecc-C--CceEEEEee-cccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            589999999999999999999987 7  999999983 344556688999999998863    444444 6678889999


Q ss_pred             eccCcccHHHHHhhhcccccchHHH-----HHHHHHHHHhhCceeeccCCCCCeEEecCC--C-----------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINNPKTA-----KILRVLSYYHSNRCLHGRLNPYQALINLSD--Y-----------------  132 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~-----------------  132 (246)
                      +.++ .||.++..-.+. .+...++     |++.-++|+|.++++||||||+|+|+....  .                 
T Consensus        91 dLLG-PsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   91 DLLG-PSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             eccC-ccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            9998 999998854321 2222222     999999999999999999999999987544  1                 


Q ss_pred             -----------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHH
Q 036362          133 -----------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISI  168 (246)
Q Consensus       133 -----------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~  168 (246)
                                                   ....-|+-|+|.++.++-.|..||.+.......++.
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKy  233 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKY  233 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHH
Confidence                                         122233889999999988999999987665544443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.87  E-value=4.8e-22  Score=152.79  Aligned_cols=152  Identities=21%  Similarity=0.272  Sum_probs=123.1

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC--CcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      |++.+.||+|++|.||++.... +  +..+++|.......  ....+.+|+..++.++|+|++++    ......++++|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~-~--~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKG-T--GELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVME   77 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcC-C--CcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEe
Confidence            6788999999999999999976 5  67889998333222  46788899999999999999887    45578999999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------  131 (246)
                      ++++++|.+++.....    ........+++.+|.+||+++++|+||+|.||+++..+                      
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (225)
T smart00221       78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK  157 (225)
T ss_pred             ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence            9998899999976432    12223334999999999999999999999999998644                      


Q ss_pred             --------Cee----------eEEEeehhhHHHHHHhhCCCCCCC
Q 036362          132 --------YTV----------KIARLISVGCIFAEMVIQEPLSED  158 (246)
Q Consensus       132 --------~~~----------~~~Di~slG~i~~~l~~g~~~~~~  158 (246)
                              ..+          ..+|+|++|+++++|++|+.||..
T Consensus       158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                    001          136799999999999999999966

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.86  E-value=4.6e-23  Score=180.03  Aligned_cols=199  Identities=20%  Similarity=0.230  Sum_probs=142.3

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcc--cccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISP--LKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~--l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +|...+.||++.|=+|.+|++.+    |. |++|+.  .........+.+++.-  ...+++||+.++    ...+..||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e----G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE----GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC----ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHH
Confidence            46678899999999999999877    33 778872  2222233334443333  444589999998    67788899


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      |-+|.. -+|.|.+...+   ....+.++.||+.||+-+|..||+|||||.+|||+.+-+                    
T Consensus        99 vRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP  177 (1431)
T KOG1240|consen   99 VRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP  177 (1431)
T ss_pred             HHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence            999999 99999987643   223445566999999999999999999999999998776                    


Q ss_pred             ------------------------------------CeeeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCC
Q 036362          132 ------------------------------------YTVKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       132 ------------------------------------~~~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                                                          .-....||+|+||+++|+++ |+++|.-    .|+-..-..   
T Consensus       178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~---  250 (1431)
T KOG1240|consen  178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSG---  250 (1431)
T ss_pred             ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhcc---
Confidence                                                01123469999999999998 8999952    121111110   


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhC-CCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILL-PDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                        .    ........ .--+...+.++..|++.||++|.||++.|+-
T Consensus       251 ------------------~----~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  251 ------------------N----ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ------------------C----ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence                              0    00001111 1234589999999999999999999999975

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.86  E-value=6.8e-22  Score=149.93  Aligned_cols=125  Identities=10%  Similarity=0.046  Sum_probs=96.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcch----------hhhhhcccccCCCCceEEe----c
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS----------ILTKISPLKEMDYPLIFRK----E   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~----------~~~E~~~l~~l~~~~i~~~----~   67 (246)
                      ++|++++.||.|+||.||++.. .    ...+|+|.........+.          +.+|++.+.++.|++|...    .
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~-~----~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~  105 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT-D----YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL  105 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec-C----CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence            5899999999999999998655 3    446899993222222222          5789999999999998765    1


Q ss_pred             --C------CceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE
Q 036362           68 --N------DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus        68 --~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                        .      .+..+++|||++|.+|.++...     ......+++.+|..+|+.|++|||+||+||++++++  ..++|
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g--i~liD  177 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----SEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG--LRIID  177 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccHHHhhhc-----cHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC--EEEEE
Confidence              1      2468999999999999887421     123344999999999999999999999999999766  77777

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3.3e-21  Score=152.60  Aligned_cols=137  Identities=18%  Similarity=0.210  Sum_probs=100.8

Q ss_pred             CCceEEEEEeccCcccHHHHHhhhccccc--chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNFLDIIN--NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~--~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      .....|+||..++ .+|..++.......-  ..+.+|+++|+.|||.+||.|||+|.+|||+.-+.              
T Consensus       314 ~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  314 EPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             CCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence            3578999999999 999999976543332  23344999999999999999999999999976554              


Q ss_pred             ----------------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh
Q 036362          132 ----------------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRL  171 (246)
Q Consensus       132 ----------------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~  171 (246)
                                                              ..-+.+|.|+.|.+.||++....||.+..+...-..    
T Consensus       393 LAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r----  468 (598)
T KOG4158|consen  393 LADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR----  468 (598)
T ss_pred             eeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh----
Confidence                                                    112234589999999999999999986433211000    


Q ss_pred             hCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHH
Q 036362          172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVND  232 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e  232 (246)
                                             .+-...+...+..+++.+++++..+|+.||++|+|+.=
T Consensus       469 -----------------------~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i  506 (598)
T KOG4158|consen  469 -----------------------TYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI  506 (598)
T ss_pred             -----------------------hhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence                                   01111222334678999999999999999999998653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=3.6e-20  Score=150.15  Aligned_cols=205  Identities=13%  Similarity=0.131  Sum_probs=138.6

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-CCCcchhhhhhcccccCCC----CceEEe---c--CCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-DGVPISILTKISPLKEMDY----PLIFRK---E--NDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~----~~i~~~---~--~~~~~   72 (246)
                      +|++.++||+|+||.||.|.+..+.  ...+|+|..... ......+..|..++..+..    .++..+   .  ...+.
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~--~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK--NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC--CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            6999999999999999999987722  457888883332 2223378888888888862    344444   3  45689


Q ss_pred             EEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----CeeeEE------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----YTVKIA------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----~~~~~~------  137 (246)
                      ++||+.++ .+|.++........++.     +..|++.+|.+||+.|++||||||+|+++...+    ....+.      
T Consensus        97 ~iVM~l~G-~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   97 FIVMSLLG-PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEEEeccC-ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            99999998 99999886544333333     333999999999999999999999999998643    122223      


Q ss_pred             -------------------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCC
Q 036362          138 -------------------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       138 -------------------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                                                                 |+||+++++.++..|..||.............+....
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~  255 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK  255 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence                                                       3899999999999998888765543332222221110


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                      .....                        .....+.++.++...+-..+...+|....+.
T Consensus       256 ~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~  291 (322)
T KOG1164|consen  256 LLTDR------------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLA  291 (322)
T ss_pred             hcccc------------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence            00000                        1123445666666666667777777665543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.83  E-value=4.6e-21  Score=142.25  Aligned_cols=132  Identities=15%  Similarity=0.068  Sum_probs=89.7

Q ss_pred             ccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------------C---
Q 036362           82 LNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------------Y---  132 (246)
Q Consensus        82 ~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------------~---  132 (246)
                      |||.+++....    +.....+..|++.||.|||+++      ||+|||++.++                      .   
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE   74 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPE   74 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceeeccceEeeccccCCCcccccChH
Confidence            68888886532    2233334449999999999998      99999998654                      1   


Q ss_pred             ------eeeEEEeehhhHHHHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhC
Q 036362          133 ------TVKIARLISVGCIFAEMVIQEPLSEDASESR-ERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILL  205 (246)
Q Consensus       133 ------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (246)
                            ....+||||+||++++|++|+.||....... ....+......   ......                   ...
T Consensus        75 ~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------~~~  132 (176)
T smart00750       75 VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA---DDPRDR-------------------SNL  132 (176)
T ss_pred             HhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc---CCcccc-------------------ccH
Confidence                  1224789999999999999999997654322 22222221110   000000                   000


Q ss_pred             CCCCh--HHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          206 PDLEP--AGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       206 ~~~~~--~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ...++  ++.+++.+||..||.+|||+.|+++|+|+..
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            12233  6999999999999999999999999998753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK10345 hypothetical protein; Provisional

Probab=99.82  E-value=4.1e-20  Score=139.66  Aligned_cols=133  Identities=18%  Similarity=0.187  Sum_probs=95.4

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccC-----CCCceEEe----cCC---ce
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEM-----DYPLIFRK----END---KL   71 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~----~~~---~~   71 (246)
                      .-.+.||+|+||.||.  +.. .  ... ++|+ ..........+.+|+.+++.+     +||||+++    .++   +.
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~-~--~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~   78 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPE-D--AQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY   78 (210)
T ss_pred             CCcceecCCCceEEEE--CCC-C--cCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence            4457899999999995  444 2  333 5777 222233556899999999999     57999998    221   34


Q ss_pred             -EEEEEec--cCcccHHHHHhhhcccccchHHHHHHHHH-HHHhhCceeeccCCCCCeEEecCC---CeeeEEEeehhh
Q 036362           72 -VYQIFEY--TGLLNLRKVIKNFLDIINNPKTAKILRVL-SYYHSNRCLHGRLNPYQALINLSD---YTVKIARLISVG  143 (246)
Q Consensus        72 -~~lv~e~--~~~~~L~~~~~~~~~~~~~~~~~qil~~L-~~lH~~~i~H~Dikp~Nil~~~~~---~~~~~~Di~slG  143 (246)
                       +.+|+||  +.++||.+++++.........+.|++.++ +|||+++|+||||||+|||++..+   ...+++|.....
T Consensus        79 v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345         79 VYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             EEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence             3378999  45799999997632111112345888888 999999999999999999998532   368999954443

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.81  E-value=1.4e-20  Score=140.86  Aligned_cols=129  Identities=13%  Similarity=0.038  Sum_probs=89.2

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---C-------cchh-----------------hhhhcccccC
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---V-------PISI-----------------LTKISPLKEM   58 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~-------~~~~-----------------~~E~~~l~~l   58 (246)
                      +.+.||+|++|.||+|....    ++.||+|+......   .       ..++                 .+|+..+..+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~~----g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   76 (190)
T cd05147           1 INGCISTGKEANVYHATTAN----GEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL   76 (190)
T ss_pred             CCCccccccceEEEEEECCC----CCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            35789999999999998863    78899998221110   1       1122                 3488999988


Q ss_pred             CCCceEEe--cCCceEEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHH-hhCceeeccCCCCCeEEecCCC
Q 036362           59 DYPLIFRK--ENDKLVYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYY-HSNRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        59 ~~~~i~~~--~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~l-H~~~i~H~Dikp~Nil~~~~~~  132 (246)
                      .++++...  ......++||||++|+++.......   +...+..+..|++.+|.++ |+.||+||||||+|||++. + 
T Consensus        77 ~~~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~-  154 (190)
T cd05147          77 VTAGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-G-  154 (190)
T ss_pred             HHCCCCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-C-
Confidence            76655221  1112238999999987765543221   1122333445999999999 7999999999999999983 3 


Q ss_pred             eeeEEEee
Q 036362          133 TVKIARLI  140 (246)
Q Consensus       133 ~~~~~Di~  140 (246)
                      ..+++|+.
T Consensus       155 ~v~LiDFG  162 (190)
T cd05147         155 KLYIIDVS  162 (190)
T ss_pred             cEEEEEcc
Confidence            68888874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.81  E-value=8.7e-20  Score=142.52  Aligned_cols=186  Identities=13%  Similarity=0.179  Sum_probs=117.9

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCC-----------Cce-----E
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDY-----------PLI-----F   64 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~-----------~~i-----~   64 (246)
                      ...+.||.|+++.||.+++.. +  ++.+++|+    ........+.+.+|......+.+           ..+     +
T Consensus        15 ~~~~~i~~g~~~~v~~v~d~~-t--~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   15 VRGRIIGKGGFSIVFEVTDVE-T--GEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETT-T--TEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             EEccccccCCceEEEEEEEcc-C--CceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            467789999999999999998 6  88899998    22222234455555544444221           112     2


Q ss_pred             Ee----------cCCc-----eEEEEEeccCcccHHHHHhh---hccc--ccch-----HHHHHHHHHHHHhhCceeecc
Q 036362           65 RK----------ENDK-----LVYQIFEYTGLLNLRKVIKN---FLDI--INNP-----KTAKILRVLSYYHSNRCLHGR  119 (246)
Q Consensus        65 ~~----------~~~~-----~~~lv~e~~~~~~L~~~~~~---~~~~--~~~~-----~~~qil~~L~~lH~~~i~H~D  119 (246)
                      ++          ....     +.+++|+-+. +||.+++..   ....  ....     .++|++..+++||+.|++|+|
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgd  170 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGD  170 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecc
Confidence            22          1111     3477899898 999888753   1111  1111     123999999999999999999


Q ss_pred             CCCCCeEEecCC--------------------------C-----------------eeeEEEeehhhHHHHHHhhCCCCC
Q 036362          120 LNPYQALINLSD--------------------------Y-----------------TVKIARLISVGCIFAEMVIQEPLS  156 (246)
Q Consensus       120 ikp~Nil~~~~~--------------------------~-----------------~~~~~Di~slG~i~~~l~~g~~~~  156 (246)
                      |||+|++++.+|                          .                 .....|.|++|+++|.++.++.||
T Consensus       171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf  250 (288)
T PF14531_consen  171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF  250 (288)
T ss_dssp             -SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred             cceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence            999999999988                          0                 011235899999999999999999


Q ss_pred             CCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCC
Q 036362          157 EDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKER  227 (246)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R  227 (246)
                      ........          +            .+          .+. ...++++.+++||+++|+.||.+|
T Consensus       251 ~~~~~~~~----------~------------~~----------~f~-~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  251 GLSSPEAD----------P------------EW----------DFS-RCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             CCCGGGST----------S------------GG----------GGT-TSS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCcccc----------c------------cc----------cch-hcCCcCHHHHHHHHHHccCCcccC
Confidence            75432110          0            00          011 113688999999999999999987

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.3e-20  Score=156.78  Aligned_cols=200  Identities=15%  Similarity=0.204  Sum_probs=153.3

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEEEEEeccC
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQIFEYTG   80 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~lv~e~~~   80 (246)
                      ++|+|+||.|++++.......+..++.|+   .............|..++...+ ||.++++    ......++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            47999999999986544233466777777   1222222336667778888886 9999998    67789999999999


Q ss_pred             cccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------------
Q 036362           81 LLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------------  131 (246)
Q Consensus        81 ~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------------  131 (246)
                      |++|...+.+..   +.....+.+.++-+++.+|+.+|+|||+|++||+++.+|                          
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym  160 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR  160 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence            999988876532   333444555999999999999999999999999999888                          


Q ss_pred             ------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHH-hhCCCCcCcCCCCCCccccccccCCCCcchhhhh
Q 036362          132 ------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFR-LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAIL  204 (246)
Q Consensus       132 ------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (246)
                            ......|.||+|+++++|++|..||..    +....|.. ..+.                              
T Consensus       161 ApEI~~gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~------------------------------  206 (612)
T KOG0603|consen  161 APEIINGHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEM------------------------------  206 (612)
T ss_pred             hhHhhhccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCC------------------------------
Confidence                  123345699999999999999999987    23333333 1111                              


Q ss_pred             CCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCC
Q 036362          205 LPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDV  242 (246)
Q Consensus       205 ~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~  242 (246)
                      ++.++..+++++..++..+|..|.-     +.|+++|+||+.+
T Consensus       207 p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  207 PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence            2567889999999999999999985     4789999999886

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.80  E-value=1.7e-19  Score=139.82  Aligned_cols=154  Identities=15%  Similarity=0.204  Sum_probs=121.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~lv~e   77 (246)
                      .|++.++||+|.||..+.|++.- .  ++.||||... ......++.-|.+..+.|. .++|...    ..+.+-.||||
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~-n--ne~VAIKfEP-rkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLY-N--NEPVAIKFEP-RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeecccccc-c--CceEEEEecc-ccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            58999999999999999999877 6  8899999833 3345567888888888874 5666544    56778889999


Q ss_pred             ccCcccHHHHHhh----hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----CeeeE-------------
Q 036362           78 YTGLLNLRKVIKN----FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----YTVKI-------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~----~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----~~~~~-------------  136 (246)
                      .++ .||.|+..-    ++-.+...++.|++.-++|+|++.+|.|||||+|+||..-+    .-+.+             
T Consensus       105 LLG-PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  105 LLG-PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             hhC-cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            998 999888743    33334444444999999999999999999999999998655    12222             


Q ss_pred             ---------------------------------EEeehhhHHHHHHhhCCCCCCCCcc
Q 036362          137 ---------------------------------ARLISVGCIFAEMVIQEPLSEDASE  161 (246)
Q Consensus       137 ---------------------------------~Di~slG~i~~~l~~g~~~~~~~~~  161 (246)
                                                       -|+-|+|-++.+++.|..||.+-..
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence                                             3389999999999999999987443

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.80  E-value=6e-20  Score=137.81  Aligned_cols=129  Identities=13%  Similarity=0.043  Sum_probs=90.4

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC---------------------------cchhhhhhcccccC
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV---------------------------PISILTKISPLKEM   58 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l   58 (246)
                      +.+.||+|++|+||+|++..    ++.||+|+.......                           .....+|...+..+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~~----g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   76 (190)
T cd05145           1 INGCISTGKEANVYHARTGD----GEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL   76 (190)
T ss_pred             CCceeecCCCcEEEEEEcCC----CCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            46789999999999998763    788999982221110                           11124678888888


Q ss_pred             CCCceEEe--cCCceEEEEEeccCcccHHHH-Hhhhc--ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCC
Q 036362           59 DYPLIFRK--ENDKLVYQIFEYTGLLNLRKV-IKNFL--DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        59 ~~~~i~~~--~~~~~~~lv~e~~~~~~L~~~-~~~~~--~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~  132 (246)
                      .++++...  ......++||||++|+++... +....  ......+..|++.+|.++|+ +||+||||||+||+++ ++ 
T Consensus        77 ~~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~-  154 (190)
T cd05145          77 YEAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG-  154 (190)
T ss_pred             HhCCCCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC-
Confidence            88876322  111234899999997755433 33221  12333444599999999999 9999999999999998 44 


Q ss_pred             eeeEEEee
Q 036362          133 TVKIARLI  140 (246)
Q Consensus       133 ~~~~~Di~  140 (246)
                      .++++|+.
T Consensus       155 ~~~liDFG  162 (190)
T cd05145         155 KPYIIDVS  162 (190)
T ss_pred             CEEEEEcc
Confidence            78888864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=3.6e-19  Score=132.55  Aligned_cols=126  Identities=10%  Similarity=-0.031  Sum_probs=93.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcc-----hhhhhhcccccCC-CCceEEecCCceEEEEEe
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI-----SILTKISPLKEMD-YPLIFRKENDKLVYQIFE   77 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~E~~~l~~l~-~~~i~~~~~~~~~~lv~e   77 (246)
                      ..+...|++|+||+|+.+...     +.+++.+.....+-...     .+.+|+++|++++ ++++.++..-+..+++|+
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~~-----~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvme   78 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRGG-----ERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRS   78 (218)
T ss_pred             cccceeecCCCcceEEEeecC-----CceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEe
Confidence            346778999999999977663     44565554333333333     5789999999995 466777632345799999


Q ss_pred             ccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccC-CCCCeEEecCCCeeeEEEe
Q 036362           78 YTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRL-NPYQALINLSDYTVKIARL  139 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Di-kp~Nil~~~~~~~~~~~Di  139 (246)
                      |+.|.+|.......    ......|++.+|.++|++||+|||| ||+|||++.++ .++++|+
T Consensus        79 yI~G~~L~~~~~~~----~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g-~i~LIDF  136 (218)
T PRK12274         79 YLAGAAMYQRPPRG----DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDG-SPAVIDF  136 (218)
T ss_pred             eecCccHHhhhhhh----hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCC-CEEEEEC
Confidence            99989997654321    1234559999999999999999999 79999998665 6888883

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.75  E-value=5.2e-17  Score=131.28  Aligned_cols=212  Identities=23%  Similarity=0.367  Sum_probs=149.3

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCC-CCcchhhhhhcccccCCCC-ceEEe----cCCceEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPD-GVPISILTKISPLKEMDYP-LIFRK----ENDKLVYQ   74 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~-~~~~~~~~E~~~l~~l~~~-~i~~~----~~~~~~~l   74 (246)
                      |++.+.||.|+||.||.+.+..      .+++|.   ..... .....+.+|+.++..+.|+ +++++    ......++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~------~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   75 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRK------LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYL   75 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEecc------EEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEE
Confidence            7889999999999999998863      345555   11112 2467899999999999988 69887    34455799


Q ss_pred             EEeccCcccHHHHHhhhc------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe---------------
Q 036362           75 IFEYTGLLNLRKVIKNFL------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT---------------  133 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~---------------  133 (246)
                      +++++.++++.+++....      ......+..|++.++.|+|+.|++|||+||+||+++..+..               
T Consensus        76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence            999999999997776432      22333344499999999999999999999999999865411               


Q ss_pred             ---------------------------------eeEEEeehhhHHHHHHhhCCCCCCCCcc---hHHHHHHHHhhCCC-C
Q 036362          134 ---------------------------------VKIARLISVGCIFAEMVIQEPLSEDASE---SRERISIFRLMGEP-S  176 (246)
Q Consensus       134 ---------------------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~-~  176 (246)
                                                       ....|+||+|+++++++.|..||.....   .............+ .
T Consensus       156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  235 (384)
T COG0515         156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL  235 (384)
T ss_pred             CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence                                             1134588999888888888888776553   22333333322221 0


Q ss_pred             cCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ......             ..       .......+.+++..++..+|..|.+..+...+++...
T Consensus       236 ~~~~~~-------------~~-------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         236 ASPLSP-------------SN-------PELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             ccccCc-------------cc-------cchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            000000             00       0122468899999999999999999999988866654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.75  E-value=5.9e-18  Score=148.11  Aligned_cols=184  Identities=20%  Similarity=0.246  Sum_probs=132.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEecCCceEEEEEeccCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGL   81 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~lv~e~~~~   81 (246)
                      ++|+.++.|-.|+||.||.++++. +  .+.+|+|+...     .-+++-  ++.....|.++                 
T Consensus        83 ~df~~IklisngAygavylvrh~~-t--rqrfa~kiNkq-----~lilRn--ilt~a~npfvv-----------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKE-T--RQRFAMKINKQ-----NLILRN--ILTFAGNPFVV-----------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccc-c--ccchhhccccc-----chhhhc--cccccCCccee-----------------
Confidence            478999999999999999999987 5  66777776211     111111  34444444444                 


Q ss_pred             ccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------------------
Q 036362           82 LNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------------------  131 (246)
Q Consensus        82 ~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------------------  131 (246)
                      ||=.+.++......     .+++.+++|||+-||+|||+||+|.++..-|                              
T Consensus       136 gDc~tllk~~g~lP-----vdmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t  210 (1205)
T KOG0606|consen  136 GDCATLLKNIGPLP-----VDMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDT  210 (1205)
T ss_pred             chhhhhcccCCCCc-----chhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHH
Confidence            33334443321111     1458899999999999999999999999887                              


Q ss_pred             -----------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 -----------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 -----------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                             ...|-.|.|++|+|+|+++.|+.||.+.+..+.+.........              
T Consensus       211 ~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~--------------  276 (1205)
T KOG0606|consen  211 HEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE--------------  276 (1205)
T ss_pred             HHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc--------------
Confidence                                   2344456799999999999999999988877766555552111              


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC---CHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI---TVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~---s~~e~l~h~~~~~~~  243 (246)
                             |+..     -...++++++++.++|..+|..|.   .+-++-+|+||+.+.
T Consensus       277 -------wpE~-----dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  277 -------WPEE-----DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             -------cccc-----CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence                   1111     145789999999999999999997   577788999998764

>smart00090 RIO RIO-like kinase

Probab=99.74  E-value=1.9e-18  Score=133.57  Aligned_cols=132  Identities=14%  Similarity=0.030  Sum_probs=93.5

Q ss_pred             ccceeeeCCccceEEEEEE-EcccccchhhhhhccccCCCC---C----------------------cchhhhhhccccc
Q 036362            4 YRKVELIGRGKYGSFYKCE-EDVAENAYQTVLLKADIIPDG---V----------------------PISILTKISPLKE   57 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~-~~~~~~~~~~vaiK~~~~~~~---~----------------------~~~~~~E~~~l~~   57 (246)
                      |++.+.||+|++|.||+|. +.. +  ++.||+|+......   .                      ...+.+|+..+..
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~-~--g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~  106 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDG-S--GKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR  106 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCC-C--CcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            7889999999999999998 433 4  78899998321110   0                      0124679999999


Q ss_pred             CCCCc--eEEecCCceEEEEEeccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhhCc-eeeccCCCCCeEEecCC
Q 036362           58 MDYPL--IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHSNR-CLHGRLNPYQALINLSD  131 (246)
Q Consensus        58 l~~~~--i~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~~-i~H~Dikp~Nil~~~~~  131 (246)
                      +.+.+  +.+.......++||||++|.+|..........   ....+..|++.+|.+||++| ++||||||+||+++ + 
T Consensus       107 L~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~-  184 (237)
T smart00090      107 LYEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D-  184 (237)
T ss_pred             HHhcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C-
Confidence            87533  22331122358999999988886654222111   12234459999999999999 99999999999998 3 


Q ss_pred             CeeeEEEee
Q 036362          132 YTVKIARLI  140 (246)
Q Consensus       132 ~~~~~~Di~  140 (246)
                      ...+++|+.
T Consensus       185 ~~i~LiDFg  193 (237)
T smart00090      185 GKVVIIDVS  193 (237)
T ss_pred             CCEEEEECh
Confidence            468888863

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=8.5e-18  Score=148.75  Aligned_cols=128  Identities=20%  Similarity=0.287  Sum_probs=99.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCce----EEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI----FRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i----~~~----~~~~~~~   73 (246)
                      ++|.|.+.||+|+||+||+|...+    ++.+|+|+  ..+...-.+.--.+++.+|+ +-+    +.+    ...+..+
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~----~~~~alK~--e~P~~~WEfYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSN----GKLVALKV--EKPPNPWEFYICLQVMERLK-PQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCC----CcEEEEEe--ecCCCceeeeehHHHHHhhc-hhhhcchHHHHHHHccCCcce
Confidence            468899999999999999999977    88999999  44555666666667777777 333    332    5677889


Q ss_pred             EEEeccCcccHHHHHhhhcccccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecCC------CeeeEEE
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLSD------YTVKIAR  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------~~~~~~D  138 (246)
                      +|++|.+.|||.++++..  ....++     ..|++..++.||..+||||||||.|+|+...-      ...+++|
T Consensus       771 lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID  844 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID  844 (974)
T ss_pred             eeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence            999999999999999843  233332     22999999999999999999999999986332      3456666

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=9.2e-18  Score=128.18  Aligned_cols=125  Identities=14%  Similarity=0.091  Sum_probs=94.8

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCC-C--------cchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-V--------PISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~-~--------~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++.||+|++|.||+|.+.     +..+++|....... .        ...+.+|+.++..+.|+++...    ......+
T Consensus         1 ~~~l~~G~~~~vy~~~~~-----~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~   75 (211)
T PRK14879          1 MKLIKRGAEAEIYLGDFL-----GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI   75 (211)
T ss_pred             CcccccCceEEEEEEeeC-----CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE
Confidence            367999999999999873     44677886221111 1        1357789999999988776432    3556788


Q ss_pred             EEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      ++|||++|++|.+++..... .......+++.+|.++|++|++|||++|.||+++ + ..+.++|+
T Consensus        76 lv~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~-~~~~liDf  138 (211)
T PRK14879         76 IVMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-G-GKIYLIDF  138 (211)
T ss_pred             EEEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-C-CCEEEEEC
Confidence            99999999999999865432 3334444999999999999999999999999998 3 36778885

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.72  E-value=7.7e-18  Score=127.33  Aligned_cols=129  Identities=16%  Similarity=0.116  Sum_probs=95.4

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC-----------------------CcchhhhhhcccccCCC
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-----------------------VPISILTKISPLKEMDY   60 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~-----------------------~~~~~~~E~~~l~~l~~   60 (246)
                      |.+.+.||+|+||.||++....    +..+++|+......                       ......+|+.++..+.+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   92 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPD----GNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE   92 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCC----CCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence            7788999999999999998753    77899997221110                       01135678888888877


Q ss_pred             Cc--eEEecCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE
Q 036362           61 PL--IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus        61 ~~--i~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      ++  +.+.......+++|||++|++|.+....   ........+++.++.++|++|++||||||+||+++.++ .++++|
T Consensus        93 ~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~-~~~liD  168 (198)
T cd05144          93 EGFPVPKPIDWNRHAVVMEYIDGVELYRVRVL---EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE-KIYIID  168 (198)
T ss_pred             cCCCCCceeecCCceEEEEEeCCcchhhcccc---ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC-cEEEEE
Confidence            64  3333333456899999999998776431   23334455999999999999999999999999998644 788888


Q ss_pred             ee
Q 036362          139 LI  140 (246)
Q Consensus       139 i~  140 (246)
                      +.
T Consensus       169 fg  170 (198)
T cd05144         169 WP  170 (198)
T ss_pred             CC
Confidence            53

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.71  E-value=6.7e-17  Score=139.50  Aligned_cols=124  Identities=16%  Similarity=0.165  Sum_probs=93.9

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCC------CCcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPD------GVPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~------~~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      |...+.||+|+||.||++.+.. .    .+++|...   ...      ....++.+|+++++.++|+++...    ....
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~-~----~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLG-R----DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             cCccceeccCCcEEEEEEeecC-c----cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            4567899999999999998755 2    23333210   000      113467889999999999987653    3445


Q ss_pred             eEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      ..++||||++|++|.+++..     ......+++.+|.+||++|++||||||+||+++ + ..++++|+
T Consensus       410 ~~~lv~E~~~g~~L~~~l~~-----~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~-~~~~liDF  471 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLEG-----NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-D-DRLYLIDF  471 (535)
T ss_pred             CCEEEEEecCCCcHHHHHHH-----HHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-C-CcEEEEeC
Confidence            67899999999999998862     234556999999999999999999999999995 3 36788884

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.7e-17  Score=124.68  Aligned_cols=202  Identities=14%  Similarity=0.143  Sum_probs=150.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      +..+.-+|...-.|..|++++..+.  -.-.++++..........+..|.-.|+...||||..+    .+.-++.++..|
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~  268 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY  268 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence            3446667888999999999998733  1111234456667778889999999999999999987    556788999999


Q ss_pred             cCcccHHHHHhhhc-----ccccchHHHHHHHHHHHHhhCc-ee-eccCCCCCeEEecCC--------------------
Q 036362           79 TGLLNLRKVIKNFL-----DIINNPKTAKILRVLSYYHSNR-CL-HGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        79 ~~~~~L~~~~~~~~-----~~~~~~~~~qil~~L~~lH~~~-i~-H~Dikp~Nil~~~~~--------------------  131 (246)
                      ++-+||+..+....     ........++++.|.+|||+.. ++ ---++...|++|.+-                    
T Consensus       269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y  348 (448)
T KOG0195|consen  269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAY  348 (448)
T ss_pred             ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeecccccc
Confidence            99999999997644     2233445559999999999863 33 335677788887543                    


Q ss_pred             ----------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          132 ----------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       132 ----------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                      ...+.+|+|||+++++|+.+...||..-+..+...++.-- |                      
T Consensus       349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale-g----------------------  405 (448)
T KOG0195|consen  349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE-G----------------------  405 (448)
T ss_pred             CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc-c----------------------
Confidence                            2234466999999999999999999987766544433321 0                      


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHH
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA  233 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~  233 (246)
                          -....+++++.-...|+.-|...||.+||..+.+
T Consensus       406 ----lrv~ippgis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  406 ----LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             ----ccccCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence                0011247889999999999999999999987764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.70  E-value=3.5e-17  Score=123.82  Aligned_cols=121  Identities=15%  Similarity=0.107  Sum_probs=91.0

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCCC-C--------CcchhhhhhcccccCCCCceEE--e--cCCceEEEE
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-G--------VPISILTKISPLKEMDYPLIFR--K--ENDKLVYQI   75 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-~--------~~~~~~~E~~~l~~l~~~~i~~--~--~~~~~~~lv   75 (246)
                      .||+|++|.||++...     +..+++|...... .        ...++.+|+++++.++++++..  .  ......+++
T Consensus         1 ~ig~G~~~~vy~~~~~-----~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv   75 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-----GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIV   75 (199)
T ss_pred             CCCCCceEEEEEeecC-----CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
Confidence            4799999999999853     4567788722111 1        1245668999999998765432  2  344556899


Q ss_pred             EeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEee
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLI  140 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di~  140 (246)
                      |||++|++|.+++.....    ....+++.+|.+||+.|++|||++|+||+++ + ....++|+.
T Consensus        76 ~e~~~g~~l~~~~~~~~~----~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~-~~~~liDfg  134 (199)
T TIGR03724        76 MEYIEGKPLKDVIEEGND----ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-D-DKLYLIDFG  134 (199)
T ss_pred             EEEECCccHHHHHhhcHH----HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-C-CcEEEEECC
Confidence            999999999988765321    5566999999999999999999999999998 3 468888853

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.62  E-value=5.5e-16  Score=116.13  Aligned_cols=127  Identities=17%  Similarity=0.096  Sum_probs=83.0

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchh-------------------------hhhhcccccCCC
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISI-------------------------LTKISPLKEMDY   60 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------~~E~~~l~~l~~   60 (246)
                      +.+.||+|+||+||+|....    +..||+|+...........                         ..|...+..+.+
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~~----~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~   76 (187)
T cd05119           1 VGGPIGTGKEADVYLALDGD----GEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYE   76 (187)
T ss_pred             CCcccccccceeEEEEECCC----CCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHH
Confidence            35789999999999998763    6789999822211111111                         234444444432


Q ss_pred             Cc--eEEecCCceEEEEEeccCcc-----cHHHHHhhhcccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCC
Q 036362           61 PL--IFRKENDKLVYQIFEYTGLL-----NLRKVIKNFLDIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        61 ~~--i~~~~~~~~~~lv~e~~~~~-----~L~~~~~~~~~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~  132 (246)
                      .+  +.+.......+++|||++++     +|.+....   ........+++.++.++|. +||+||||||+||+++ + .
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~---~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~-~  151 (187)
T cd05119          77 AGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLL---EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D-G  151 (187)
T ss_pred             cCCCCCceEecCCCEEEEEEeCCCCccChhhhhhhhc---ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C-C
Confidence            22  22222223468999999974     33333221   3344555599999999999 9999999999999999 3 4


Q ss_pred             eeeEEEeeh
Q 036362          133 TVKIARLIS  141 (246)
Q Consensus       133 ~~~~~Di~s  141 (246)
                      .++++|+.+
T Consensus       152 ~~~liDfg~  160 (187)
T cd05119         152 KVYIIDVPQ  160 (187)
T ss_pred             cEEEEECcc
Confidence            788888744

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.57  E-value=8.4e-15  Score=113.53  Aligned_cols=125  Identities=10%  Similarity=0.094  Sum_probs=88.7

Q ss_pred             eeeC-CccceEEEEEEEcccccchhhhhhccc----------c----CCCCCcchhhhhhcccccCCCCce--EEe----
Q 036362            8 ELIG-RGKYGSFYKCEEDVAENAYQTVLLKAD----------I----IPDGVPISILTKISPLKEMDYPLI--FRK----   66 (246)
Q Consensus         8 ~~lg-~G~~g~V~~~~~~~~~~~~~~vaiK~~----------~----~~~~~~~~~~~E~~~l~~l~~~~i--~~~----   66 (246)
                      ..|| .|+.|+||.+....     ..+++|..          .    ........+.+|+.++..++|++|  ...    
T Consensus        37 ~~lg~~~g~gtv~~v~~~~-----~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPG-----VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEeCC-----ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence            3577 78889999887643     23455541          1    112234578889999999988775  222    


Q ss_pred             -cCCc---eEEEEEeccCc-ccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEee
Q 036362           67 -ENDK---LVYQIFEYTGL-LNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLI  140 (246)
Q Consensus        67 -~~~~---~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di~  140 (246)
                       ....   ..++|||+++| .+|.+++....  .......+++.+|.+||++||+||||||+|||++.++ .++++|+.
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~--l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~-~v~LIDfg  187 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEAP--LSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPDG-KFWLIDFD  187 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcCC--CCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC-CEEEEECC
Confidence             1112   33599999996 69988886531  1223345999999999999999999999999998755 78888864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.55  E-value=1.1e-14  Score=104.98  Aligned_cols=123  Identities=16%  Similarity=0.186  Sum_probs=92.1

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC--CceEEe----cCCceEEEEEecc
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY--PLIFRK----ENDKLVYQIFEYT   79 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~----~~~~~~~lv~e~~   79 (246)
                      +++.||+|.++.||++....     ..+++|....... ...+.+|+..++.+++  ..+.++    ...+..++++||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-----~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-----EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC-----CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence            56889999999999999854     3578887332222 4678899999999865  355554    4446799999999


Q ss_pred             CcccHHHHHhhhcccccchHHHHHHHHHHHHhhC---ceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           80 GLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN---RCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~---~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      +|.++..+    ..........+++.+|.++|..   +++|||++|+||+++.. ...+++|+
T Consensus        76 ~g~~~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~-~~~~l~Df  133 (155)
T cd05120          76 EGETLDEV----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG-KILGIIDW  133 (155)
T ss_pred             CCeecccC----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC-cEEEEEec
Confidence            98877654    1122233455899999999984   79999999999999963 47788884

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.52  E-value=1.7e-15  Score=131.05  Aligned_cols=214  Identities=16%  Similarity=0.207  Sum_probs=155.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~   73 (246)
                      ..|.+.+.||+|+|+.|-.+......  ...++.|.   ..........+..|..+-..+. |.|++.+    .+....+
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~--~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDP--ESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCC--cceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            35889999999999999998876533  44445554   2233455667777888888887 9999998    6678899


Q ss_pred             EEEeccCcccHHHHH-hhh----cccccchHHHHHHHHHHHHh-hCceeeccCCCCCeEEecCCCee-------------
Q 036362           74 QIFEYTGLLNLRKVI-KNF----LDIINNPKTAKILRVLSYYH-SNRCLHGRLNPYQALINLSDYTV-------------  134 (246)
Q Consensus        74 lv~e~~~~~~L~~~~-~~~----~~~~~~~~~~qil~~L~~lH-~~~i~H~Dikp~Nil~~~~~~~~-------------  134 (246)
                      +.+++..|+++.+.+ ...    .......+..|+..+|.|+| ..++.|+||||+|.+++..+...             
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            999999999999888 332    13344455559999999999 99999999999999998766222             


Q ss_pred             -------------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          135 -------------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       135 -------------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                     +..|+||.|+++.-+++|..|+.........                  
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~------------------  239 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR------------------  239 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc------------------
Confidence                                           2234788888888888887776543322100                  


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                        +..    +...........+..++....+++.+++..+|..|.+.+++-.+||+..
T Consensus       240 --~~~----~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  240 --YSS----WKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             --cee----ecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence              000    0000001112224678899999999999999999999999999999987

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.44  E-value=1.9e-13  Score=100.64  Aligned_cols=121  Identities=16%  Similarity=0.082  Sum_probs=87.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEE-e--cCCceEEEEEeccCccc
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFR-K--ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~-~--~~~~~~~lv~e~~~~~~   83 (246)
                      ++.|+.|.++.||+++..     +..+++|.............+|..+++.+.+.++++ +  ......++|||+++|.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~-----~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~   77 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-----NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSE   77 (170)
T ss_pred             eeecCCcccCceEEEEEC-----CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCc
Confidence            467899999999999864     446889984333323345688999999886544332 2  22234579999999888


Q ss_pred             HHHHHhhhcccccchHHHHHHHHHHHHhhCce-----eeccCCCCCeEEecCCCeeeEEEe
Q 036362           84 LRKVIKNFLDIINNPKTAKILRVLSYYHSNRC-----LHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        84 L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i-----~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      +.+.     .........+++.+|..||+.++     +|||++|.||+++ ++ ...++|.
T Consensus        78 l~~~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~-~~~liDf  131 (170)
T cd05151          78 LLTE-----DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DG-RLWLIDW  131 (170)
T ss_pred             cccc-----cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CC-eEEEEec
Confidence            7653     11123344599999999999885     9999999999999 33 5778883

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.43  E-value=1.3e-12  Score=108.91  Aligned_cols=158  Identities=17%  Similarity=0.204  Sum_probs=111.3

Q ss_pred             cccCCCCceEEe----cCCceEEEEEeccCcccHHHHHhhhcc---cccch-HHHHHHHHHHHHhhCce-eeccCCCCCe
Q 036362           55 LKEMDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLD---IINNP-KTAKILRVLSYYHSNRC-LHGRLNPYQA  125 (246)
Q Consensus        55 l~~l~~~~i~~~----~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~-~~~qil~~L~~lH~~~i-~H~Dikp~Ni  125 (246)
                      |+.+.|.|+.++    .++...++|.+||..|+|.+.+.....   ..+.. ...+|+.||.|+|+-.| .|+.+++.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            467889999988    556889999999999999999976321   11111 22299999999998876 8999999999


Q ss_pred             EEecCC--------------------------------------------C---eeeEEEeehhhHHHHHHhhCCCCCCC
Q 036362          126 LINLSD--------------------------------------------Y---TVKIARLISVGCIFAEMVIQEPLSED  158 (246)
Q Consensus       126 l~~~~~--------------------------------------------~---~~~~~Di~slG~i~~~l~~g~~~~~~  158 (246)
                      +++..-                                            .   ..+..|+||+|++++|+++...||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            998543                                            0   23446799999999999999999875


Q ss_pred             Ccch----HHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          159 ASES----RERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       159 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                      ....    +....+.+ .+.+  ...+.                  ... .....+++..+++.|+..+|..||+++++-
T Consensus       161 ~~~~~~~~eii~~~~~-~~~~--~~rP~------------------i~~-~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKK-GGSN--PFRPS------------------IEL-LNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             ccccCChHHHHHHHHh-cCCC--CcCcc------------------hhh-hhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence            3221    12222222 1110  00000                  000 014556899999999999999999998864

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.37  E-value=1.1e-12  Score=110.13  Aligned_cols=126  Identities=10%  Similarity=0.066  Sum_probs=82.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcch----------------------------------------
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS----------------------------------------   47 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~----------------------------------------   47 (246)
                      +.||+|++|+||+|+..+    ++.||||+.  .++....                                        
T Consensus       123 ~plasaSigQVh~A~l~~----G~~VaVKv~--rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  196 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVD----GKEVAVKVL--RPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR  196 (437)
T ss_pred             cceeeeehhheEEEEecC----CCEEEEEee--CCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence            579999999999999865    778999992  1222222                                        


Q ss_pred             ---hhhhhcccccCC-----CCceEE--e--cCCceEEEEEeccCcccHHHHHhhhccc-ccchHHHHHHH-HHHHHhhC
Q 036362           48 ---ILTKISPLKEMD-----YPLIFR--K--ENDKLVYQIFEYTGLLNLRKVIKNFLDI-INNPKTAKILR-VLSYYHSN  113 (246)
Q Consensus        48 ---~~~E~~~l~~l~-----~~~i~~--~--~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~qil~-~L~~lH~~  113 (246)
                         +.+|...+..+.     ++++.-  .  ......++||||++|.+|.++....... .......+++. .+..+|..
T Consensus       197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence               233333333331     333321  1  2344578999999999998876432111 11223334554 57889999


Q ss_pred             ceeeccCCCCCeEEecCCCeeeEEEee
Q 036362          114 RCLHGRLNPYQALINLSDYTVKIARLI  140 (246)
Q Consensus       114 ~i~H~Dikp~Nil~~~~~~~~~~~Di~  140 (246)
                      |++|+|+||.||+++.++ ...++|+.
T Consensus       277 g~~H~D~hPgNilv~~~g-~i~liDfG  302 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKDG-KIIALDFG  302 (437)
T ss_pred             CceeCCCCcccEEECCCC-cEEEEeCC
Confidence            999999999999998665 67888843

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.31  E-value=2.7e-12  Score=113.27  Aligned_cols=215  Identities=17%  Similarity=0.104  Sum_probs=157.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc----ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA----DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~----~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +.+.+.+-+-+|.++.++.++-.. +  +-..+.|+    ........+....+-.++...++|.++..    ......+
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~-s--gh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAG-S--GHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             ccceecccccCCCCcccccCCccc-c--ccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            456677788889999999887655 3  32222222    33344455666666666666777888865    3567899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      ++++|+++++|.+.+.+..   ..........+..+++|||+..+.|+|++|.|.+...++                   
T Consensus       881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            9999999999999886633   334455566899999999999999999999999987666                   


Q ss_pred             --------------------------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcc
Q 036362          132 --------------------------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASE  161 (246)
Q Consensus       132 --------------------------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~  161 (246)
                                                                        ......|.|++|+.+++.++|.+||.....
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence                                                              112234489999999999999999987765


Q ss_pred             hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHH---HHhcCCC
Q 036362          162 SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVN---DALNHHY  238 (246)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~---e~l~h~~  238 (246)
                      ...+..+..    ...                      .+.......+..+++++...|..+|.+|..+.   +.-.|+|
T Consensus      1041 q~~f~ni~~----~~~----------------------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~ 1094 (1205)
T KOG0606|consen 1041 QQIFENILN----RDI----------------------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPF 1094 (1205)
T ss_pred             hhhhhcccc----CCC----------------------CCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCc
Confidence            544333222    111                      11112245788999999999999999999988   9999999


Q ss_pred             CcCCCCC
Q 036362          239 YRDVVSV  245 (246)
Q Consensus       239 ~~~~~~~  245 (246)
                      |+.++..
T Consensus      1095 ~~~~~~~ 1101 (1205)
T KOG0606|consen 1095 FQDVDWE 1101 (1205)
T ss_pred             cCCCCcc
Confidence            9998654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.23  E-value=1.8e-11  Score=102.38  Aligned_cols=207  Identities=17%  Similarity=0.175  Sum_probs=145.1

Q ss_pred             CccceeeeCC--ccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            3 KYRKVELIGR--GKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~--G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      .+.+...+|.  |.+|.||.+.... ......+|+|.   .........+-.+|+....+++ |++.++.    ..++..
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~-~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTN-SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hcccccccccCCCCCceeecccCCc-ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            3456778999  9999999998833 32377788887   3444455667778888888885 8898885    667889


Q ss_pred             EEEEeccCcccHHHHHhh----hcccccchHHHHHHH----HHHHHhhCceeeccCCCCCeEEecCCCeeeEE-------
Q 036362           73 YQIFEYTGLLNLRKVIKN----FLDIINNPKTAKILR----VLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~qil~----~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-------  137 (246)
                      ++=+|.++ .+|.++...    .....+....++...    ||..+|+.+++|-|+||.||+...++...+..       
T Consensus       194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~  272 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK  272 (524)
T ss_pred             eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence            99999998 888877643    223455556667788    99999999999999999999998774222222       


Q ss_pred             ------------------------------------EeehhhHHHHHHhhCCCCCCCC--cchHHHHHHHHhhCCCCcCc
Q 036362          138 ------------------------------------RLISVGCIFAEMVIQEPLSEDA--SESRERISIFRLMGEPSEET  179 (246)
Q Consensus       138 ------------------------------------Di~slG~i~~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                          |++++|.++.+...+.......  ..+.+....           
T Consensus       273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~-----------  341 (524)
T KOG0601|consen  273 ISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG-----------  341 (524)
T ss_pred             ccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc-----------
Confidence                                                2677776666666654433211  111110000           


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                   +      ...+.....+.++...+..|++.+|..|++++.+.+|+++..
T Consensus       342 -------------~------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  342 -------------Y------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             -------------c------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence                         0      011122455667777999999999999999999999999875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.19  E-value=1.1e-11  Score=102.09  Aligned_cols=137  Identities=19%  Similarity=0.236  Sum_probs=91.0

Q ss_pred             CceEEEEEeccCcccHHHHHhhhcc------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFLD------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------  131 (246)
                      ..++|+.|+.|.-.+|.+++.....      ........|+..|++|   +|.+|+|+||.||++..+.           
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t  404 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT  404 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence            4579999999999999999964221      1222233399999999   9999999999999987555           


Q ss_pred             ---------------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh-CCCCc
Q 036362          132 ---------------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM-GEPSE  177 (246)
Q Consensus       132 ---------------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~  177 (246)
                                                       ...+..||||||++++|++..   |....+  ......+.. |.-++
T Consensus       405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~---f~T~~e--r~~t~~d~r~g~ip~  479 (516)
T KOG1033|consen  405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ---FSTQFE--RIATLTDIRDGIIPP  479 (516)
T ss_pred             ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH---hccHHH--HHHhhhhhhcCCCCh
Confidence                                             223445699999999999972   211111  111111110 00000


Q ss_pred             CcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ..                          -.--++-.+|+.+||...|..||++.+.--|+|.
T Consensus       480 ~~--------------------------~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  480 EF--------------------------LQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HH--------------------------hhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            00                          0012345689999999999999988888888775

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.18  E-value=1.3e-11  Score=105.15  Aligned_cols=138  Identities=7%  Similarity=-0.002  Sum_probs=82.3

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCC------------------------C-----------CCcch
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP------------------------D-----------GVPIS   47 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~------------------------~-----------~~~~~   47 (246)
                      +|+. +.||+|++|+||+|+.+. +  ++.||+|+....                        .           .....
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~-~--G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~  196 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKD-N--GREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT  196 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECC-C--CCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence            4555 689999999999999977 5  788999982111                        0           00112


Q ss_pred             ------hhhhhcccccCC----CCceEEe-----cCCceEEEEEeccCcccHHHHHhhhc-ccccchHHH-HHHHHHHHH
Q 036362           48 ------ILTKISPLKEMD----YPLIFRK-----ENDKLVYQIFEYTGLLNLRKVIKNFL-DIINNPKTA-KILRVLSYY  110 (246)
Q Consensus        48 ------~~~E~~~l~~l~----~~~i~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~-qil~~L~~l  110 (246)
                            +.+|...+.++.    +...+.+     ......++||||++|+++.++-.-.. ......... .+-.-+.-+
T Consensus       197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                  233333333331    2222222     33456789999999999987532111 111111111 222223445


Q ss_pred             hhCceeeccCCCCCeEEecCC---CeeeEEEeehhhH
Q 036362          111 HSNRCLHGRLNPYQALINLSD---YTVKIARLISVGC  144 (246)
Q Consensus       111 H~~~i~H~Dikp~Nil~~~~~---~~~~~~Di~slG~  144 (246)
                      ...|++|+|+||.||+++.++   ....++|+...|.
T Consensus       277 f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~  313 (537)
T PRK04750        277 FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGS  313 (537)
T ss_pred             HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEE
Confidence            679999999999999999765   2567788544443

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.14  E-value=1.6e-10  Score=98.09  Aligned_cols=121  Identities=19%  Similarity=0.191  Sum_probs=90.8

Q ss_pred             hhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHH
Q 036362           30 YQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKIL  104 (246)
Q Consensus        30 ~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil  104 (246)
                      +.++.+.. ............+-++-|+.++||+|+++    +..+..|+|+|.+.  -|..++++........-+.||+
T Consensus        37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~~~~v~~Gl~qIl  114 (690)
T KOG1243|consen   37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELGKEEVCLGLFQIL  114 (690)
T ss_pred             CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhHHHHHHHHHHHHH
Confidence            44555544 12222345567888999999999999998    66779999999975  4666666655444444455999


Q ss_pred             HHHHHHh-hCceeeccCCCCCeEEecCC-----------------------------Ceee-------EEEeehhhHHHH
Q 036362          105 RVLSYYH-SNRCLHGRLNPYQALINLSD-----------------------------YTVK-------IARLISVGCIFA  147 (246)
Q Consensus       105 ~~L~~lH-~~~i~H~Dikp~Nil~~~~~-----------------------------~~~~-------~~Di~slG~i~~  147 (246)
                      .||.+|| +.+++|++|.-.-|+++..|                             ..|.       -.|+|.|||+.+
T Consensus       115 ~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~  194 (690)
T KOG1243|consen  115 AALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWSIDSWGLGCLIE  194 (690)
T ss_pred             HHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccchhhhhHHHHHH
Confidence            9999997 67899999999999999888                             0111       147999999999


Q ss_pred             HHhhC
Q 036362          148 EMVIQ  152 (246)
Q Consensus       148 ~l~~g  152 (246)
                      +++.|
T Consensus       195 el~ng  199 (690)
T KOG1243|consen  195 ELFNG  199 (690)
T ss_pred             HHhCc
Confidence            99988

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=3.8e-11  Score=100.48  Aligned_cols=233  Identities=18%  Similarity=0.116  Sum_probs=133.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~   72 (246)
                      +.+|..+..||.|.|+.|+.+....-+  +..|++|.   ..........-..|+.+...+. |.+++.+    ...++.
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~--~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEG--DCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCC--CceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            357889999999999999998754224  66777776   2222333344455565655553 7777764    445667


Q ss_pred             EEEEeccCcccHHHHHhh---hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--eehhhHHHH
Q 036362           73 YQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--LISVGCIFA  147 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--i~slG~i~~  147 (246)
                      |+=-|||+++++...+..   ..+......+.|++.++.++|++.++|+|+||+||++..++...++.|  +|+- ..++
T Consensus       342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~-~~~~  420 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR-LAFS  420 (524)
T ss_pred             cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc-ccee
Confidence            789999998888665522   223344444559999999999999999999999999997653334333  3431 1112


Q ss_pred             HHhh----CCCC-CCCCcchHHH---HHHHHhhCCCCcCcCCCCCCccccccccCCCCc--chhhhhCCCCChHHHHHHH
Q 036362          148 EMVI----QEPL-SEDASESRER---ISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP--KDLAILLPDLEPAGVDLLQ  217 (246)
Q Consensus       148 ~l~~----g~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~  217 (246)
                      ....    +..| .....+....   ..++. ++..-.+...+....+.    ...+-.  .......++...+++.+.+
T Consensus       421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~s-l~~~~~e~~~~~~ls~~----~~~~~~i~~~~~p~~~~~~~~~q~~~k  495 (524)
T KOG0601|consen  421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFS-LGLSVDEAITGSPLSES----GVQSLTIRSGDTPNLPGLKLQLQVLLK  495 (524)
T ss_pred             cccccccccccccchhhcccccccccccccc-ccccccccccCcccCcc----cccceeeecccccCCCchHHhhhhhhh
Confidence            2221    1111 0000000000   00000 11111111111000000    000000  0111112345588999999


Q ss_pred             HhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          218 KMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       218 ~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      .+...|+..|+++.++..|.-|..
T Consensus       496 v~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  496 VMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             hhcCCccccchhhhhhcccchhhh
Confidence            999999999999999999977654

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.08  E-value=1e-10  Score=91.55  Aligned_cols=159  Identities=22%  Similarity=0.188  Sum_probs=103.3

Q ss_pred             ccccCCCCceEEe---------cCCceEEEEEeccCcccHHHHHhhhc-------ccccchHHHHHHHHHHHHhhC--ce
Q 036362           54 PLKEMDYPLIFRK---------ENDKLVYQIFEYTGLLNLRKVIKNFL-------DIINNPKTAKILRVLSYYHSN--RC  115 (246)
Q Consensus        54 ~l~~l~~~~i~~~---------~~~~~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~qil~~L~~lH~~--~i  115 (246)
                      -|-.+.|.||+++         .+.-....++||+.-|++..++++..       ...++.+.-||++||.|||+.  .|
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi  199 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence            3334458888876         23446778999999999999997632       223333444999999999986  69


Q ss_pred             eeccCCCCCeEEecCC------------------------------------------CeeeEEEeehhhHHHHHHhhCC
Q 036362          116 LHGRLNPYQALINLSD------------------------------------------YTVKIARLISVGCIFAEMVIQE  153 (246)
Q Consensus       116 ~H~Dikp~Nil~~~~~------------------------------------------~~~~~~Di~slG~i~~~l~~g~  153 (246)
                      +|+++....|++..+|                                          .....+|||+||.-+.+|..+.
T Consensus       200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE  279 (458)
T ss_pred             ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence            9999999999998666                                          1112234777776666666554


Q ss_pred             CC-CCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHH
Q 036362          154 PL-SEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVND  232 (246)
Q Consensus       154 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e  232 (246)
                      .- -.+.....--..+...                                ....-.+--++++.+||+-.|..||++.+
T Consensus       280 iq~tnseS~~~~ee~ia~~--------------------------------i~~len~lqr~~i~kcl~~eP~~rp~ar~  327 (458)
T KOG1266|consen  280 IQSTNSESKVEVEENIANV--------------------------------IIGLENGLQRGSITKCLEGEPNGRPDARL  327 (458)
T ss_pred             eccCCCcceeehhhhhhhh--------------------------------eeeccCccccCcCcccccCCCCCCcchhh
Confidence            31 1111100000000000                                00011233457899999999999999999


Q ss_pred             HhcCCCCcCCCC
Q 036362          233 ALNHHYYRDVVS  244 (246)
Q Consensus       233 ~l~h~~~~~~~~  244 (246)
                      ++.||-+-++.+
T Consensus       328 llfHpllfeVhs  339 (458)
T KOG1266|consen  328 LLFHPLLFEVHS  339 (458)
T ss_pred             hhcCceeeecch
Confidence            999998877654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.07  E-value=1.6e-10  Score=86.17  Aligned_cols=131  Identities=14%  Similarity=0.043  Sum_probs=81.2

Q ss_pred             eeeeCCccceEEEEEEEccc---ccchhhhhhccccC--------------C---------CCCcchhh----hhhcccc
Q 036362            7 VELIGRGKYGSFYKCEEDVA---ENAYQTVLLKADII--------------P---------DGVPISIL----TKISPLK   56 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~---~~~~~~vaiK~~~~--------------~---------~~~~~~~~----~E~~~l~   56 (246)
                      ...||.|.-+.||.|.....   +..+..+|+|+...              .         ......+.    +|++.|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            45789999999999976420   00135788888100              0         11111222    6788888


Q ss_pred             cCCCCc--eEEecCCceEEEEEeccCcccHH-HHHhhhc--ccccchHHHHHHHHHHHH-hhCceeeccCCCCCeEEecC
Q 036362           57 EMDYPL--IFRKENDKLVYQIFEYTGLLNLR-KVIKNFL--DIINNPKTAKILRVLSYY-HSNRCLHGRLNPYQALINLS  130 (246)
Q Consensus        57 ~l~~~~--i~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~--~~~~~~~~~qil~~L~~l-H~~~i~H~Dikp~Nil~~~~  130 (246)
                      ++...+  +.....-...++||||+++..+. ..++...  .........+++.+|..| |+.|++|||+++.||+++. 
T Consensus        82 rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~-  160 (197)
T cd05146          82 RMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD-  160 (197)
T ss_pred             HHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC-
Confidence            775322  22222235678999999865332 1222211  111223344999999988 8999999999999999973 


Q ss_pred             CCeeeEEEe
Q 036362          131 DYTVKIARL  139 (246)
Q Consensus       131 ~~~~~~~Di  139 (246)
                      + .+.++|+
T Consensus       161 ~-~v~iIDF  168 (197)
T cd05146         161 G-KVWFIDV  168 (197)
T ss_pred             C-cEEEEEC
Confidence            3 5778886

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.04  E-value=2.6e-10  Score=82.53  Aligned_cols=128  Identities=13%  Similarity=0.120  Sum_probs=89.0

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhcccc---------CCCCCcchhhhhhcccccCC-----CCceEEecCCce
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---------IPDGVPISILTKISPLKEMD-----YPLIFRKENDKL   71 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---------~~~~~~~~~~~E~~~l~~l~-----~~~i~~~~~~~~   71 (246)
                      .+..+-+|+-+.|+++.++.     +..+||...         ...-...+..+|.+++.++.     .|-++. .+...
T Consensus        11 ~l~likQGAEArv~~~~~~G-----e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~-~D~~~   84 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSG-----EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIF-IDTYG   84 (229)
T ss_pred             cceeeeccceeeEeeeccCC-----ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEE-EecCC
Confidence            56788999999999998854     344566511         11122456778888888875     344443 44455


Q ss_pred             EEEEEeccCc-ccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee--eEEEe
Q 036362           72 VYQIFEYTGL-LNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV--KIARL  139 (246)
Q Consensus        72 ~~lv~e~~~~-~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~--~~~Di  139 (246)
                      -.++|||++| .++.+++....+...     .....+|-..+.-||..+|+|||+..+||++.+++...  -++|+
T Consensus        85 ~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdf  160 (229)
T KOG3087|consen   85 GQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDF  160 (229)
T ss_pred             CeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEee
Confidence            6789999995 378888865432222     23344899999999999999999999999999887543  44443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.01  E-value=1.2e-09  Score=83.76  Aligned_cols=77  Identities=13%  Similarity=0.089  Sum_probs=54.7

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCC--CcchhhhhhcccccCCC-----CceEEecCC----ceEEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG--VPISILTKISPLKEMDY-----PLIFRKEND----KLVYQI   75 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~-----~~i~~~~~~----~~~~lv   75 (246)
                      .+.|+.|.++.||++...+    +..+++|.......  ....+.+|..+++.+.+     |.++.....    +..+++
T Consensus         3 ~~~l~~G~~n~~~~v~~~~----g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v   78 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGG----GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYV   78 (223)
T ss_pred             ceecCCCccceEEEEEecC----CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEE
Confidence            3678999999999998744    46788998433222  45678999999998864     333443222    356899


Q ss_pred             EeccCcccHHHH
Q 036362           76 FEYTGLLNLRKV   87 (246)
Q Consensus        76 ~e~~~~~~L~~~   87 (246)
                      ||+++|.++.+.
T Consensus        79 ~e~i~G~~l~~~   90 (223)
T cd05154          79 MERVDGRVLRDR   90 (223)
T ss_pred             EEEeCCEecCCC
Confidence            999998877554

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=4.4e-10  Score=81.54  Aligned_cols=120  Identities=13%  Similarity=0.157  Sum_probs=86.2

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC---------CCCCcchhhhhhcccccCC-----CCceEEecCCceEE
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---------PDGVPISILTKISPLKEMD-----YPLIFRKENDKLVY   73 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~-----~~~i~~~~~~~~~~   73 (246)
                      ..+++|+-+.++.+.+..     ..+++|....         ..-...+..+|.+++.++.     .|-+.. .+.+...
T Consensus         2 ~~i~~GAEa~i~~~~~~g-----~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~d-vD~~~~~   75 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLG-----LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYD-VDPDNGL   75 (204)
T ss_pred             chhhCCcceeEEeeeccC-----cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEE-EcCCCCE
Confidence            467899999999986643     2355665111         1111345567888888775     333333 5556678


Q ss_pred             EEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      |+|||++|..|.+.+...    .......+-.-+.-||..||+|||+.++||.++.++  +.++|+
T Consensus        76 I~me~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~--i~~IDf  135 (204)
T COG3642          76 IVMEYIEGELLKDALEEA----RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR--IYFIDF  135 (204)
T ss_pred             EEEEEeCChhHHHHHHhc----chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc--EEEEEC
Confidence            999999988888888875    244555888889999999999999999999999644  667775

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.88  E-value=2.2e-09  Score=82.44  Aligned_cols=128  Identities=14%  Similarity=0.066  Sum_probs=90.7

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcccc---------------------CC--CCCcchhhhhhcccccCCCC
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---------------------IP--DGVPISILTKISPLKEMDYP   61 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---------------------~~--~~~~~~~~~E~~~l~~l~~~   61 (246)
                      .+...||-|.-|.||.|.+..    +.++|+|...                     .+  ........+|.++|+.|...
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~----g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~  169 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPK----GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE  169 (304)
T ss_pred             hhccccccCccceEEEEECCC----CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence            467889999999999999876    6678888710                     00  11133567788888888654


Q ss_pred             --ceEEecCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           62 --LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        62 --~i~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                        .|.+-..-+...+|||+++|.-|...--  .......+.-.|+.-+.-+-..||||||+++-||+++.+| .+.++|.
T Consensus       170 G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~--~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg-~~~vIDw  246 (304)
T COG0478         170 GVKVPKPIAWNRHAVVMEYIEGVELYRLRL--DVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDG-DIVVIDW  246 (304)
T ss_pred             CCCCCCccccccceeeeehcccceeecccC--cccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCC-CEEEEeC
Confidence              4444455677889999999877755541  1122333333677777666689999999999999999876 6777774

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.80  E-value=5.2e-08  Score=76.64  Aligned_cols=94  Identities=11%  Similarity=0.068  Sum_probs=67.2

Q ss_pred             hhhhhhcccccCC-----CCceEEe-cC-----CceEEEEEeccCcc-cHHHHHhhhcccc-----cchHHHHHHHHHHH
Q 036362           47 SILTKISPLKEMD-----YPLIFRK-EN-----DKLVYQIFEYTGLL-NLRKVIKNFLDII-----NNPKTAKILRVLSY  109 (246)
Q Consensus        47 ~~~~E~~~l~~l~-----~~~i~~~-~~-----~~~~~lv~e~~~~~-~L~~~~~~~~~~~-----~~~~~~qil~~L~~  109 (246)
                      .+.+|...+..+.     .|.++-+ +.     ....++|+|++++. +|.+++.......     ......+++..+.-
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            4788888887774     3444444 11     34678999999975 8999885421111     12333489999999


Q ss_pred             HhhCceeeccCCCCCeEEecC------CCeeeEEEee
Q 036362          110 YHSNRCLHGRLNPYQALINLS------DYTVKIARLI  140 (246)
Q Consensus       110 lH~~~i~H~Dikp~Nil~~~~------~~~~~~~Di~  140 (246)
                      ||++||+|||++++|||++.+      +....++|+-
T Consensus       154 LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~  190 (268)
T PRK15123        154 MHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLH  190 (268)
T ss_pred             HHHCcCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence            999999999999999999852      3567788853

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.75  E-value=1.7e-08  Score=75.08  Aligned_cols=91  Identities=18%  Similarity=0.154  Sum_probs=55.9

Q ss_pred             hhhhhhcccccCCCCce--EEecCCceEEEEEeccC--cccHHHHHhhh-cccccchHHHHHHHHHHH-HhhCceeeccC
Q 036362           47 SILTKISPLKEMDYPLI--FRKENDKLVYQIFEYTG--LLNLRKVIKNF-LDIINNPKTAKILRVLSY-YHSNRCLHGRL  120 (246)
Q Consensus        47 ~~~~E~~~l~~l~~~~i--~~~~~~~~~~lv~e~~~--~~~L~~~~~~~-~~~~~~~~~~qil~~L~~-lH~~~i~H~Di  120 (246)
                      ...+|.+.|..+..-++  .+...-...++||||++  |..+..+.... ..........+++..+.. +|+.||+|||+
T Consensus        54 ~~~~E~~~L~~l~~~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDL  133 (188)
T PF01163_consen   54 WAKKEFRNLKRLYEAGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDL  133 (188)
T ss_dssp             HHHHHHHHHHHCCCTT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-
T ss_pred             HHHHHHHHHHHHHHCCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCC
Confidence            45668888888875543  23322234579999999  76665544332 123334444488885544 68999999999


Q ss_pred             CCCCeEEecCCCeeeEEEe
Q 036362          121 NPYQALINLSDYTVKIARL  139 (246)
Q Consensus       121 kp~Nil~~~~~~~~~~~Di  139 (246)
                      .+.||+++.+  .+.++|+
T Consensus       134 s~~NIlv~~~--~~~iIDf  150 (188)
T PF01163_consen  134 SEYNILVDDG--KVYIIDF  150 (188)
T ss_dssp             STTSEEEETT--CEEE--G
T ss_pred             ChhhEEeecc--eEEEEec
Confidence            9999999954  6788885

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.75  E-value=2.9e-07  Score=76.70  Aligned_cols=114  Identities=13%  Similarity=0.037  Sum_probs=79.7

Q ss_pred             cceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe--------cCCceEEEEEeccCc-cc
Q 036362           14 KYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK--------ENDKLVYQIFEYTGL-LN   83 (246)
Q Consensus        14 ~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~~~~lv~e~~~~-~~   83 (246)
                      .-.+.|+|...- .  +..|++|.. ............-+++.+++.|+|||++        ..+..+++|++|.++ ++
T Consensus       288 ~~~Ttyk~~s~~-D--G~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T  364 (655)
T KOG3741|consen  288 FSITTYKATSNV-D--GNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT  364 (655)
T ss_pred             ccceeEeeeecc-C--CceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence            345788888766 4  667777772 2222222233444778889999999998        345688999999874 77


Q ss_pred             HHHHHhhhc-------------ccccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecC
Q 036362           84 LRKVIKNFL-------------DIINNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLS  130 (246)
Q Consensus        84 L~~~~~~~~-------------~~~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~  130 (246)
                      |.++.-...             ...+.+.     ..|+..||.++|+.|+..+-+.|.+|++..+
T Consensus       365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~  429 (655)
T KOG3741|consen  365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK  429 (655)
T ss_pred             HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc
Confidence            877652211             1122222     3399999999999999999999999999844

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.66  E-value=8.5e-08  Score=72.85  Aligned_cols=97  Identities=19%  Similarity=0.205  Sum_probs=69.8

Q ss_pred             CCcchhhhhhcccccCC-----CCceEEe-----cCCceEEEEEeccCc-ccHHHHHhhh---cccccchHHHHHHHHHH
Q 036362           43 GVPISILTKISPLKEMD-----YPLIFRK-----ENDKLVYQIFEYTGL-LNLRKVIKNF---LDIINNPKTAKILRVLS  108 (246)
Q Consensus        43 ~~~~~~~~E~~~l~~l~-----~~~i~~~-----~~~~~~~lv~e~~~~-~~L~~~~~~~---~~~~~~~~~~qil~~L~  108 (246)
                      ....+..+|...+..+.     -|-.+-+     ......++|+|++++ .+|.+++...   ..........++...+.
T Consensus        53 ~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   53 LRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIA  132 (206)
T ss_pred             ccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHH
Confidence            34557888888877775     3444444     112456899999986 4799998762   12233344449999999


Q ss_pred             HHhhCceeeccCCCCCeEEecCC--CeeeEEEe
Q 036362          109 YYHSNRCLHGRLNPYQALINLSD--YTVKIARL  139 (246)
Q Consensus       109 ~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~Di  139 (246)
                      -||++||+|+|++|.|||++.++  ....++|+
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDl  165 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDL  165 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcc
Confidence            99999999999999999999765  34566674

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.66  E-value=9.4e-08  Score=71.99  Aligned_cols=68  Identities=16%  Similarity=0.243  Sum_probs=51.6

Q ss_pred             cCCceEEEEEeccCcccHHHHHhhhcccccchHH-HHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEeehh
Q 036362           67 ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT-AKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISV  142 (246)
Q Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~-~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di~sl  142 (246)
                      ......+++|||++|..|.+...-      .+.. -.+..++.-+|+.|+.|||..|.|+++..++  ..++|.-..
T Consensus       113 ~~~~~~~ll~EYIeG~~l~d~~~i------~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~--i~iID~~~k  181 (229)
T PF06176_consen  113 RYTSSYVLLMEYIEGVELNDIEDI------DEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG--IRIIDTQGK  181 (229)
T ss_pred             cceeEEEEEEEEecCeecccchhc------CHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc--EEEEECccc
Confidence            344667799999999888765321      1112 2688899999999999999999999999655  778886443

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=98.56  E-value=3.4e-07  Score=68.73  Aligned_cols=124  Identities=10%  Similarity=0.028  Sum_probs=85.0

Q ss_pred             CCccceEEEEEEEcccccchhhhhhcccc-------CCCCCcchhhhhhcccccCCCCce--EEe--------cCCceEE
Q 036362           11 GRGKYGSFYKCEEDVAENAYQTVLLKADI-------IPDGVPISILTKISPLKEMDYPLI--FRK--------ENDKLVY   73 (246)
Q Consensus        11 g~G~~g~V~~~~~~~~~~~~~~vaiK~~~-------~~~~~~~~~~~E~~~l~~l~~~~i--~~~--------~~~~~~~   73 (246)
                      |.||.+.|+......     +.+-+|...       --+.-...+.+|+..++.+...+|  .+.        ......+
T Consensus        27 ~rgG~SgV~r~~~~g-----~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~  101 (216)
T PRK09902         27 RRNGMSGVQCVERNG-----KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRAL  101 (216)
T ss_pred             CCCCcceEEEEEeCC-----cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEE
Confidence            568888899876543     235566611       113456789999999999864333  222        2234577


Q ss_pred             EEEeccCc-ccHHHHHhhhccc--cc---chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEEEe
Q 036362           74 QIFEYTGL-LNLRKVIKNFLDI--IN---NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIARL  139 (246)
Q Consensus        74 lv~e~~~~-~~L~~~~~~~~~~--~~---~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~Di  139 (246)
                      ||+|-++| .||.+++.+....  ..   .....++..++.-||+.|+.|+|+.+.||+++.++ ....++|.
T Consensus       102 LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDl  174 (216)
T PRK09902        102 LVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDL  174 (216)
T ss_pred             EEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEh
Confidence            89997664 7898888653221  11   23334999999999999999999999999998555 34777884

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.40  E-value=2.5e-05  Score=64.16  Aligned_cols=209  Identities=14%  Similarity=0.120  Sum_probs=113.7

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEE-e----------cCCceEE
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFR-K----------ENDKLVY   73 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~-~----------~~~~~~~   73 (246)
                      ..+.||+|+-+.+|-.-.-. .    . +-|+...  .....-.+-...|.+. .||-+-. +          ..+.-..
T Consensus        15 ~gr~LgqGgea~ly~l~e~~-d----~-VAKIYh~--Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG   86 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEVR-D----Q-VAKIYHA--PPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG   86 (637)
T ss_pred             CCccccCCccceeeecchhh-c----h-hheeecC--CCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence            56789999999999654332 1    2 2333111  1112222222333333 4654432 2          2223367


Q ss_pred             EEEeccCcccH-HHHHhh------hcccccchH---HHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------
Q 036362           74 QIFEYTGLLNL-RKVIKN------FLDIINNPK---TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------  136 (246)
Q Consensus        74 lv~e~~~~~~L-~~~~~~------~~~~~~~~~---~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------  136 (246)
                      ++|..+.|..- ..+++.      .........   .+.++.+...||+.|.+-||++++|+|++.++ ...+       
T Consensus        87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~-~V~LVdsDsfq  165 (637)
T COG4248          87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDS-KVVLVDSDSFQ  165 (637)
T ss_pred             EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCc-eEEEEccccee
Confidence            88888875422 222211      111111111   22899999999999999999999999998666 2222       


Q ss_pred             ------------------------------------EEeehhhHHHHHHhhC-CCCCCCCcchHHHHHHHHhhCCCCc-C
Q 036362          137 ------------------------------------ARLISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSE-E  178 (246)
Q Consensus       137 ------------------------------------~Di~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~-~  178 (246)
                                                          .|.+.||+++++++.| +.||.+.....         ..|.+ +
T Consensus       166 i~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~---------~ap~p~E  236 (637)
T COG4248         166 INANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLIS---------DAPNPLE  236 (637)
T ss_pred             eccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccC---------CCCCcch
Confidence                                                3489999999999996 89998643210         11111 1


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcC--CCCCCCHHH
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVN--PKERITVND  232 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d--p~~R~s~~e  232 (246)
                      ....-..+-.-..............-+.-++++++.|..+|++..  +.-|||++.
T Consensus       237 ~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         237 TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence            000000000000011111111122223457899999999999764  457999764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=1.8e-07  Score=80.24  Aligned_cols=116  Identities=15%  Similarity=0.211  Sum_probs=82.0

Q ss_pred             HHHHHHHHHhh-CceeeccCCCCCeEEecCC-----------------------------------------------Ce
Q 036362          102 KILRVLSYYHS-NRCLHGRLNPYQALINLSD-----------------------------------------------YT  133 (246)
Q Consensus       102 qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~-----------------------------------------------~~  133 (246)
                      +...||.|+|. .++||++|.|++|.++..+                                               ..
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~  186 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTN  186 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccc
Confidence            56689999996 5899999999999999777                                               11


Q ss_pred             eeEEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHH
Q 036362          134 VKIARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAG  212 (246)
Q Consensus       134 ~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (246)
                      .-.+|++|+||+++.++. |+..+........+.......+...                         .....++++++
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~-------------------------~~~s~~~p~el  241 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGA-------------------------FGYSNNLPSEL  241 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccc-------------------------ccccccCcHHH
Confidence            122458999998888884 5555554433221111111111000                         00115789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          213 VDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       213 ~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ++-+.++|..++..||++.+++..|||.+.
T Consensus       242 ~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  242 RESLKKLLNGDSAVRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             HHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence            999999999999999999999999999985

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=3.2e-06  Score=61.25  Aligned_cols=125  Identities=18%  Similarity=0.111  Sum_probs=86.8

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-cCCceEEEEEeccCccc
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-~~~~~~~lv~e~~~~~~   83 (246)
                      +..+.|++|.+|.||++.+..     ..+|+|+. ..+.....+..|.++|..+...++.+= ..-+.-.+.|||+.|..
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~-----~~~a~Kvr-r~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRG-----GEVALKVR-RRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeeccC-----ceEEEEEe-cCCcchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcc
Confidence            356689999999999999965     26788872 345566789999999999986665432 12222334599999889


Q ss_pred             HHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCC-CC-CeEEecCCCeeeEEEeeh
Q 036362           84 LRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLN-PY-QALINLSDYTVKIARLIS  141 (246)
Q Consensus        84 L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dik-p~-Nil~~~~~~~~~~~Di~s  141 (246)
                      |.+.-...    -......++.+---|-..||-|+.|. |. ||+++ ++ .+-++|+=|
T Consensus        99 L~~~~~~~----~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~-~~-~~~iIDFd~  152 (201)
T COG2112          99 LGKLEIGG----DRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVN-DR-DVYIIDFDS  152 (201)
T ss_pred             hhhhhhcc----cHHHHHHHHHHHHHHHHhccchhhhcCCceeEEec-CC-cEEEEEccc
Confidence            98775532    22333456666556677899999998 54 55555 44 678888655

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.02  E-value=2.3e-05  Score=60.42  Aligned_cols=68  Identities=18%  Similarity=0.070  Sum_probs=47.4

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----CCceEEe-cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----YPLIFRK-ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~-~~~~~~~lv~e~~~~   81 (246)
                      ..||+|..+.||+.   .    +..+++|.... ........+|.++++.+.     .|-++.+ ...+...++|++++|
T Consensus         7 ~~i~~G~t~~~y~~---~----~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH---K----TGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe---c----CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            57899999999973   1    33467887332 223456788999888764     4555555 455667899999997


Q ss_pred             cc
Q 036362           82 LN   83 (246)
Q Consensus        82 ~~   83 (246)
                      .+
T Consensus        79 ~~   80 (226)
T TIGR02172        79 KR   80 (226)
T ss_pred             cc
Confidence            53

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.91  E-value=0.00012  Score=57.05  Aligned_cols=71  Identities=10%  Similarity=0.122  Sum_probs=45.9

Q ss_pred             eeCCccc-eEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC----CCceEEe-cCCceEEEEEeccCcc
Q 036362            9 LIGRGKY-GSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD----YPLIFRK-ENDKLVYQIFEYTGLL   82 (246)
Q Consensus         9 ~lg~G~~-g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~----~~~i~~~-~~~~~~~lv~e~~~~~   82 (246)
                      .|-.|.+ +.||++...     +..+++|......  ...+.+|+++++.+.    .|.++.. ...+..++||++++|.
T Consensus         5 ~~~~g~~~~~v~~~~~~-----~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-----NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-----CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence            4445555 789988653     3367788733222  456788988888774    3444444 3335678999999987


Q ss_pred             cHHH
Q 036362           83 NLRK   86 (246)
Q Consensus        83 ~L~~   86 (246)
                      ++..
T Consensus        78 ~l~~   81 (244)
T cd05150          78 PAAA   81 (244)
T ss_pred             cHhH
Confidence            7753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.88  E-value=0.0001  Score=55.43  Aligned_cols=129  Identities=16%  Similarity=0.142  Sum_probs=82.3

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCC-----------------CCCcchhhhhhcccccCC------CCce
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-----------------DGVPISILTKISPLKEMD------YPLI   63 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~E~~~l~~l~------~~~i   63 (246)
                      ...||+|+.-.||.--..      ...+||+....                 .....+..+|+.....+.      +.+|
T Consensus         6 ~~~i~~G~~R~cy~HP~d------p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i   79 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPDD------PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHI   79 (199)
T ss_pred             CcccccCCCceEEECCCC------CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccc
Confidence            457899999999954332      23456662111                 233567777777666665      5566


Q ss_pred             EEe----cCCceEEEEEeccC------cccHHHHHhhhcccccchHHHHHHH-HHHHHhhCceeeccCCCCCeEEecCCC
Q 036362           64 FRK----ENDKLVYQIFEYTG------LLNLRKVIKNFLDIINNPKTAKILR-VLSYYHSNRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        64 ~~~----~~~~~~~lv~e~~~------~~~L~~~~~~~~~~~~~~~~~qil~-~L~~lH~~~i~H~Dikp~Nil~~~~~~  132 (246)
                      .++    ..+....+|+|.+.      ..||.++++..   .+.....+.+. -..||-+++|+.+|++|.||++...+.
T Consensus        80 ~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~  156 (199)
T PF10707_consen   80 PRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTEELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS  156 (199)
T ss_pred             ccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccHHHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence            665    55667788888853      35678888553   34444444444 448899999999999999999987653


Q ss_pred             ee-eEEEeehhhH
Q 036362          133 TV-KIARLISVGC  144 (246)
Q Consensus       133 ~~-~~~Di~slG~  144 (246)
                      .. ++.-|=.+|.
T Consensus       157 ~~~~lvlIDG~G~  169 (199)
T PF10707_consen  157 GEFRLVLIDGLGE  169 (199)
T ss_pred             CceEEEEEeCCCC
Confidence            32 3333333443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.88  E-value=1.6e-05  Score=60.91  Aligned_cols=127  Identities=16%  Similarity=0.120  Sum_probs=72.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcch-------------------------hhhhhcccccCCCC
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS-------------------------ILTKISPLKEMDYP   61 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------~~~E~~~l~~l~~~   61 (246)
                      ...|.+|.-+.||.|....    +..+|+|+...+......                         ...|+..|+.+..-
T Consensus        53 ~g~istGKEA~Vy~a~~~~----~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA  128 (268)
T COG1718          53 VGCISTGKEANVYLAETGD----GRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA  128 (268)
T ss_pred             EeeecCCcceEEEeeccCC----CceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            3467778888999998754    667888882222211111                         11234444444322


Q ss_pred             ceE--EecCCceEEEEEeccCcccH-HHHHhhhc-cc-ccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeee
Q 036362           62 LIF--RKENDKLVYQIFEYTGLLNL-RKVIKNFL-DI-INNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVK  135 (246)
Q Consensus        62 ~i~--~~~~~~~~~lv~e~~~~~~L-~~~~~~~~-~~-~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~  135 (246)
                      +|-  +-.....-.+||||++.... .=.++... +. ......-+++..+.-|=. .++||+||+.-|||+. ++ .+.
T Consensus       129 GVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~-~p~  206 (268)
T COG1718         129 GVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DG-EPY  206 (268)
T ss_pred             CCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CC-eEE
Confidence            211  11223456799999883311 11111111 01 111222277777766665 8999999999999999 44 688


Q ss_pred             EEEe
Q 036362          136 IARL  139 (246)
Q Consensus       136 ~~Di  139 (246)
                      ++|+
T Consensus       207 iID~  210 (268)
T COG1718         207 IIDV  210 (268)
T ss_pred             EEEC
Confidence            8886

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.80  E-value=8.8e-05  Score=57.46  Aligned_cols=75  Identities=12%  Similarity=0.003  Sum_probs=44.9

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEE-e-cCCceEEEEEeccCcccH
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFR-K-ENDKLVYQIFEYTGLLNL   84 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~-~-~~~~~~~lv~e~~~~~~L   84 (246)
                      ++.|..|-...+|++......  +..|++|+............+|..+++.+...++++ + .... -.++|||++|.++
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~--~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~~~l~e~i~G~~l   79 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDN--QDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ-NGLIYEFIPGRTL   79 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCC--CCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC-CcEEEEeeCCCcC
Confidence            467888999999998754201  346778873322222233457888888885333322 2 1111 2479999997665

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.79  E-value=5.5e-05  Score=64.85  Aligned_cols=128  Identities=13%  Similarity=0.140  Sum_probs=77.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcc---------------------------------
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISP---------------------------------   54 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~---------------------------------   54 (246)
                      +.|+.++-|+||+|+.++    ++.||||+  ..++....+..-+.+                                 
T Consensus       131 ~PiAsASIaQVH~A~L~s----G~~VAVKV--qrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~  204 (517)
T COG0661         131 EPIASASIAQVHRAVLKS----GEEVAVKV--QRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE  204 (517)
T ss_pred             CchhhhhHhhheeEEecC----CCEEEEEe--cCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence            467899999999999987    88999999  112222222222222                                 


Q ss_pred             ----------cccC-----CCCceE--Ee--cCCceEEEEEeccCcccHHHHHhhhcccccc--hHHHHHHH-HHHHHhh
Q 036362           55 ----------LKEM-----DYPLIF--RK--ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN--PKTAKILR-VLSYYHS  112 (246)
Q Consensus        55 ----------l~~l-----~~~~i~--~~--~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~--~~~~qil~-~L~~lH~  112 (246)
                                +..+     +.+++.  ++  +....-.++|||++|..+.+...... .+..  .....++. -+..+=.
T Consensus       205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~~  283 (517)
T COG0661         205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLLR  283 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHHh
Confidence                      2222     122221  11  44567889999999999988853222 2222  22222332 2234445


Q ss_pred             CceeeccCCCCCeEEecCCCeeeEEEeehhh
Q 036362          113 NRCLHGRLNPYQALINLSDYTVKIARLISVG  143 (246)
Q Consensus       113 ~~i~H~Dikp~Nil~~~~~~~~~~~Di~slG  143 (246)
                      .|+.|.|..|.||+++.+| ..-..|+...|
T Consensus       284 dgffHaDpHpGNi~v~~~g-~i~~lDfGi~g  313 (517)
T COG0661         284 DGFFHADPHPGNILVRSDG-RIVLLDFGIVG  313 (517)
T ss_pred             cCccccCCCccceEEecCC-cEEEEcCccee
Confidence            8999999999999999876 44555643333

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.72  E-value=2.8e-05  Score=59.96  Aligned_cols=74  Identities=18%  Similarity=0.238  Sum_probs=52.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC-----CceEEe----cCCceEEEEEe
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY-----PLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~~----~~~~~~~lv~e   77 (246)
                      ++.|+.|..+.||.+.... .    .+++|..... .....+.+|..+++.+..     |-++..    ......+++|+
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~----~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~   75 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-G----RYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME   75 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-S----EEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC-c----EEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence            4678999999999998865 2    6888983322 345678888888887742     344432    23345799999


Q ss_pred             ccCcccHHH
Q 036362           78 YTGLLNLRK   86 (246)
Q Consensus        78 ~~~~~~L~~   86 (246)
                      +++|.++..
T Consensus        76 ~i~g~~~~~   84 (239)
T PF01636_consen   76 YIPGRPLDD   84 (239)
T ss_dssp             EESSEEHHH
T ss_pred             Eeccccccc
Confidence            999887776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.67  E-value=0.00057  Score=56.93  Aligned_cols=74  Identities=14%  Similarity=0.126  Sum_probs=49.6

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhcccc-------CC-CCCcchhhhhhcccccCC---CCceEEe--cCCceEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-------IP-DGVPISILTKISPLKEMD---YPLIFRK--ENDKLVY   73 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-------~~-~~~~~~~~~E~~~l~~l~---~~~i~~~--~~~~~~~   73 (246)
                      .+.||.|.+..||++.... +  .+.+++|...       .. +....+...|.+.|+.+.   -..+.++  .+....+
T Consensus        31 ~~elggGn~N~VyrV~~~~-g--~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~  107 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTE-G--GKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAV  107 (401)
T ss_pred             eeEcCCCceEEEEEEEeCC-C--CeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCE
Confidence            4678999999999999865 2  2468899721       10 123456778888888763   1233344  4556688


Q ss_pred             EEEeccCccc
Q 036362           74 QIFEYTGLLN   83 (246)
Q Consensus        74 lv~e~~~~~~   83 (246)
                      +|||++++..
T Consensus       108 lVME~L~~~~  117 (401)
T PRK09550        108 TVMEDLSDHK  117 (401)
T ss_pred             EEEecCCCcc
Confidence            9999998543

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.61  E-value=2.8e-05  Score=65.49  Aligned_cols=170  Identities=16%  Similarity=0.155  Sum_probs=106.6

Q ss_pred             CCcchhhhhhcccccCCCCceEEe-----cCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceee
Q 036362           43 GVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLH  117 (246)
Q Consensus        43 ~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H  117 (246)
                      .+..+++....+++.+.|++.-.+     .......+|+|+++ .||.+...... ....    +++       .+|+.|
T Consensus        24 ~~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~-l~~~----s~~-------~~~~~~   90 (725)
T KOG1093|consen   24 PNSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN-LKDE----SLL-------AHGVLH   90 (725)
T ss_pred             CcHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc-cchh----hhc-------ccccce
Confidence            345667778889999999998665     33345889999999 99999987643 1111    111       222222


Q ss_pred             ccCCC-CCeEEecCC-CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          118 GRLNP-YQALINLSD-YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       118 ~Dikp-~Nil~~~~~-~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                      -.+-. ..=+.+... .....+|+||+|.++.++..|...+..-.+.+....+......+..-..               
T Consensus        91 ~~~~~~td~~~t~~~~~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~---------------  155 (725)
T KOG1093|consen   91 LNIIYITDHFLTKYPSPIGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLS---------------  155 (725)
T ss_pred             ehhhhccccccccCCCCCCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHH---------------
Confidence            21110 001111111 1113689999999999999998877766665555555554322211000               


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                        ........-.+++.+.++..+|+...|..||...++.+++-|.++
T Consensus       156 --~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  156 --TAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             --HHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence              000001112467788899999999999999999999999988765

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.61  E-value=0.00013  Score=57.43  Aligned_cols=68  Identities=7%  Similarity=0.034  Sum_probs=43.5

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCCCCCc-chhhhhhcccccCCC----CceEEecCCceEEEEEeccCccc
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVP-ISILTKISPLKEMDY----PLIFRKENDKLVYQIFEYTGLLN   83 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~~~~~~   83 (246)
                      .+..|-.+.+|+...   .  +..+++|......... ....+|..+++.+..    |.++....   -++|++|++|..
T Consensus         3 ~~~~G~tn~~y~~~~---~--~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~---~~~v~e~i~G~~   74 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH---P--GISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE---HWLLVEWLEGEV   74 (256)
T ss_pred             cCCCcCcCCeEEEEe---C--CccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC---CEEEEEeccCcc
Confidence            456788889998873   3  5567888733222221 345788888888853    44443322   368999999765


Q ss_pred             H
Q 036362           84 L   84 (246)
Q Consensus        84 L   84 (246)
                      +
T Consensus        75 ~   75 (256)
T TIGR02721        75 I   75 (256)
T ss_pred             c
Confidence            4

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.49  E-value=0.00048  Score=55.18  Aligned_cols=128  Identities=13%  Similarity=0.166  Sum_probs=86.6

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcccc-------------------CCCCC----cchhhhhhcccccCC-
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-------------------IPDGV----PISILTKISPLKEMD-   59 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-------------------~~~~~----~~~~~~E~~~l~~l~-   59 (246)
                      +.+...||-|.-+-||.+.+..    +.+.++|...                   .+..+    .-...+|...|+.+. 
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~----G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e  169 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEE----GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE  169 (465)
T ss_pred             hhhccccccccccceEEEecCC----CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence            4577889999999999998876    6677777710                   00001    123345666666664 


Q ss_pred             CCceEEe-cCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE
Q 036362           60 YPLIFRK-ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus        60 ~~~i~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      |..=|+- .+-+..++|||++.|..|...-.-.   ..+...-.++.-+.-|..+|+||+|.+--||+++.++ .+.++|
T Consensus       170 ~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~---d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~-~i~vID  245 (465)
T KOG2268|consen  170 RGFPVPKPIDHNRHCVVMELVDGYPLRQVRHVE---DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDD-KIVVID  245 (465)
T ss_pred             cCCCCCCcccccceeeHHHhhcccceeeeeecC---ChHHHHHHHHHHHHHHHHcCceecccchheeEEecCC-CEEEee
Confidence            3332322 5567789999999988887654321   1222222677777889999999999999999999544 677778


Q ss_pred             e
Q 036362          139 L  139 (246)
Q Consensus       139 i  139 (246)
                      +
T Consensus       246 F  246 (465)
T KOG2268|consen  246 F  246 (465)
T ss_pred             c
Confidence            5

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.40  E-value=0.0018  Score=48.61  Aligned_cols=117  Identities=14%  Similarity=0.134  Sum_probs=73.5

Q ss_pred             CCccceeeeCCccc-eEEEEEEEcccccchhhhhhcc----ccCCC------------------CCcchhhhhhcccccC
Q 036362            2 EKYRKVELIGRGKY-GSFYKCEEDVAENAYQTVLLKA----DIIPD------------------GVPISILTKISPLKEM   58 (246)
Q Consensus         2 ~~y~i~~~lg~G~~-g~V~~~~~~~~~~~~~~vaiK~----~~~~~------------------~~~~~~~~E~~~l~~l   58 (246)
                      ++++.++.||.|.- |.||+++..     +..||+|+    .....                  .....+..|.+....|
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-----g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRL  111 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-----GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRL  111 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-----CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHH
Confidence            46788999999999 999999885     44789998    10000                  1223455666666665


Q ss_pred             C---CCce--EEe------c-C---------------CceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHh
Q 036362           59 D---YPLI--FRK------E-N---------------DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYH  111 (246)
Q Consensus        59 ~---~~~i--~~~------~-~---------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH  111 (246)
                      +   +.++  +++      . +               .-...||.||.+...          ......+.+|++-+.-+|
T Consensus       112 ke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~~~~~~~~dl~~~~  181 (207)
T PF13095_consen  112 KEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIRDIPQMLRDLKILH  181 (207)
T ss_pred             HhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchhHHHHHHHHHHHHH
Confidence            3   3334  443      0 0               012345555554222          011222338999999999


Q ss_pred             hCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362          112 SNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus       112 ~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      ..||+-+|+++.|..      ..+++|+
T Consensus       182 k~gI~~~Dv~~~ny~------~G~lvDf  203 (207)
T PF13095_consen  182 KLGIVPRDVKPRNYR------GGKLVDF  203 (207)
T ss_pred             HCCeeeccCcccccc------CCEEEec
Confidence            999999999999984      3456664

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.36  E-value=0.00027  Score=60.64  Aligned_cols=124  Identities=13%  Similarity=0.140  Sum_probs=72.3

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhcccc------------------------CC--------CCCcchhhhhhccc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI------------------------IP--------DGVPISILTKISPL   55 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~------------------------~~--------~~~~~~~~~E~~~l   55 (246)
                      +.||.-+.|+|++|+-+.    ++.||+|+..                        ..        +.....+.+|++-+
T Consensus       167 ~piaaASlaQVhrA~L~~----G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~  242 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN----GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT  242 (538)
T ss_pred             chhhhcchhheEEEEecC----CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence            568888999999999987    8888898810                        00        00111222222222


Q ss_pred             c------c----CCCCc------eEEe--cCCceEEEEEeccCcccHHHHH--hhhcccccchH--HHHHHHHH-HHHhh
Q 036362           56 K------E----MDYPL------IFRK--ENDKLVYQIFEYTGLLNLRKVI--KNFLDIINNPK--TAKILRVL-SYYHS  112 (246)
Q Consensus        56 ~------~----l~~~~------i~~~--~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~--~~qil~~L-~~lH~  112 (246)
                      +      +    +.|-+      |.++  .......|+|||++|..+.|.-  .+.   .+...  ...+.++. .-+=.
T Consensus       243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~---gi~~~~i~~~l~~~~~~qIf~  319 (538)
T KOG1235|consen  243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR---GISPHDILNKLVEAYLEQIFK  319 (538)
T ss_pred             HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc---CCCHHHHHHHHHHHHHHHHHh
Confidence            1      1    12333      2233  3445789999999998876553  332   22222  11333332 22335


Q ss_pred             CceeeccCCCCCeEEecC---CCeeeEEE
Q 036362          113 NRCLHGRLNPYQALINLS---DYTVKIAR  138 (246)
Q Consensus       113 ~~i~H~Dikp~Nil~~~~---~~~~~~~D  138 (246)
                      .|++|.|-.|.||++.++   +..+-+.|
T Consensus       320 ~GffHaDPHPGNilv~~~~~~~~~ivllD  348 (538)
T KOG1235|consen  320 TGFFHADPHPGNILVRPNPEGDEEIVLLD  348 (538)
T ss_pred             cCCccCCCCCCcEEEecCCCCCccEEEEc
Confidence            799999999999999954   34555556

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.29  E-value=0.00084  Score=53.94  Aligned_cols=124  Identities=12%  Similarity=0.011  Sum_probs=73.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCc--eEEe----------cCCceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL--IFRK----------ENDKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~----------~~~~~~~l   74 (246)
                      ++.|..|....+|+.....     ..+++|+...  .....+..|+.++..+...+  +.+.          ...+..++
T Consensus        19 i~~i~~G~~n~~y~v~~~~-----~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~   91 (296)
T cd05153          19 FEGISAGIENTNYFVTTDS-----GRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA   91 (296)
T ss_pred             eecccCccccceEEEEeCC-----CcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence            5567788888999886533     3577887332  34556778888888774332  2222          12345689


Q ss_pred             EEeccCcccHH-----------HHHhhh---c----cc----ccchHH---------------H-HHHHHHHHHhh----
Q 036362           75 IFEYTGLLNLR-----------KVIKNF---L----DI----INNPKT---------------A-KILRVLSYYHS----  112 (246)
Q Consensus        75 v~e~~~~~~L~-----------~~~~~~---~----~~----~~~~~~---------------~-qil~~L~~lH~----  112 (246)
                      ++++++|.++.           ..+.+.   .    ..    ......               . .+..++.++.+    
T Consensus        92 l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~  171 (296)
T cd05153          92 LVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPS  171 (296)
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhh
Confidence            99999975542           111110   0    00    000000               0 22334455543    


Q ss_pred             ---CceeeccCCCCCeEEecCCCeeeEEE
Q 036362          113 ---NRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       113 ---~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                         .+++|+|+.|.||+++.++ .+.++|
T Consensus       172 ~~~~~l~HgD~~~~Nil~~~~~-~~~iID  199 (296)
T cd05153         172 DLPRGVIHADLFRDNVLFDGDE-LSGVID  199 (296)
T ss_pred             cCCCcCCccCcCcccEEEeCCc-eEEEee
Confidence               4799999999999999644 557888

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PLN02876 acyl-CoA dehydrogenase

Probab=97.27  E-value=0.00066  Score=62.29  Aligned_cols=76  Identities=12%  Similarity=0.119  Sum_probs=49.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCC--CCcchhhhhhcccccCC-CCce-----EEe-cC---CceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--GVPISILTKISPLKEMD-YPLI-----FRK-EN---DKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i-----~~~-~~---~~~~~l   74 (246)
                      ++.++.|.+..+|+..... ......+++|+.....  .....+.+|.++++.+. |.++     +.+ .+   .+..|+
T Consensus        43 v~~l~gG~sn~ty~l~~~~-~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGN-GGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEEeCCCCcCceEEEEECC-CCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            5678999999999987654 2111356777732221  22346889999999885 5543     222 22   246789


Q ss_pred             EEeccCccc
Q 036362           75 IFEYTGLLN   83 (246)
Q Consensus        75 v~e~~~~~~   83 (246)
                      ||||++|..
T Consensus       122 VME~v~G~~  130 (822)
T PLN02876        122 IMEYLEGRI  130 (822)
T ss_pred             EEEecCCcc
Confidence            999999654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.22  E-value=0.0017  Score=50.41  Aligned_cols=69  Identities=9%  Similarity=0.086  Sum_probs=41.6

Q ss_pred             eeeeCCccce-EEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC------CceEEec-C---CceEEEE
Q 036362            7 VELIGRGKYG-SFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY------PLIFRKE-N---DKLVYQI   75 (246)
Q Consensus         7 ~~~lg~G~~g-~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~~-~---~~~~~lv   75 (246)
                      ++.|+.|+.. .||...  .      .+++|.... ......+.+|..+++.+..      |.++... .   ....+++
T Consensus         2 ~~~~~~gG~~n~vy~~~--~------~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l   72 (235)
T cd05155           2 IEPVDSGGTDNATFRLG--D------DMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV   72 (235)
T ss_pred             ceeccCCCcccceEEcC--C------ceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence            3567877776 588762  1      356787332 2234578889988877642      3333221 1   1245889


Q ss_pred             EeccCcccH
Q 036362           76 FEYTGLLNL   84 (246)
Q Consensus        76 ~e~~~~~~L   84 (246)
                      |++++|.++
T Consensus        73 ~~~i~G~~l   81 (235)
T cd05155          73 YRWLEGETA   81 (235)
T ss_pred             EEeecCCCC
Confidence            999997665

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.06  E-value=0.00026  Score=65.00  Aligned_cols=70  Identities=16%  Similarity=0.107  Sum_probs=45.0

Q ss_pred             hhhhhhcccccCCCCceEEe-------cCCc-eEEEEEeccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhhCce
Q 036362           47 SILTKISPLKEMDYPLIFRK-------ENDK-LVYQIFEYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHSNRC  115 (246)
Q Consensus        47 ~~~~E~~~l~~l~~~~i~~~-------~~~~-~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~~i  115 (246)
                      ....|+..+.+..|+|++.+       ...+ ...+..+++...++.+.++.....   ....+..+++.||.|+|+...
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l  307 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL  307 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence            34446777888899999876       1111 233455677778888777664322   223334499999999999843


Q ss_pred             e
Q 036362          116 L  116 (246)
Q Consensus       116 ~  116 (246)
                      .
T Consensus       308 ~  308 (1351)
T KOG1035|consen  308 E  308 (1351)
T ss_pred             c
Confidence            3

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.03  E-value=0.014  Score=47.69  Aligned_cols=75  Identities=13%  Similarity=0.043  Sum_probs=44.5

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEeccCcc
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEYTGLL   82 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~~~~~   82 (246)
                      ++.|..|-...+|++...........|++|+..........-.+|..+++.+..    |.++.....   .+|.+|++|.
T Consensus        19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~---G~i~~fi~g~   95 (330)
T PLN02421         19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGN---GMIQSFINAR   95 (330)
T ss_pred             EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCC---cEeehhhcCC
Confidence            345666888889988754311112368889844333334445678888888753    444433222   2588888766


Q ss_pred             cH
Q 036362           83 NL   84 (246)
Q Consensus        83 ~L   84 (246)
                      +|
T Consensus        96 ~l   97 (330)
T PLN02421         96 TL   97 (330)
T ss_pred             CC
Confidence            54

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.01  E-value=0.0015  Score=52.68  Aligned_cols=75  Identities=17%  Similarity=0.139  Sum_probs=46.9

Q ss_pred             eeeeCCccceEEEEEEEccc---ccchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEecc
Q 036362            7 VELIGRGKYGSFYKCEEDVA---ENAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEYT   79 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~~   79 (246)
                      ++.|..|-...+|++.....   ...+..+++|+............+|..++..+..    |.++....+   .+|++|+
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~---~~v~e~i   79 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN---GRIEEFI   79 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC---Cchhhee
Confidence            45677888889998875420   0113578889844444444677888888888853    333333222   3578888


Q ss_pred             CcccH
Q 036362           80 GLLNL   84 (246)
Q Consensus        80 ~~~~L   84 (246)
                      +|.++
T Consensus        80 ~G~~l   84 (302)
T cd05156          80 PSRTL   84 (302)
T ss_pred             CCCcC
Confidence            87655

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.91  E-value=0.006  Score=50.06  Aligned_cols=69  Identities=12%  Similarity=0.062  Sum_probs=47.2

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhcc-----c--c-CCCCCcchhhhhhcccccCC--CCc-eEEe--cCCceEEEE
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKA-----D--I-IPDGVPISILTKISPLKEMD--YPL-IFRK--ENDKLVYQI   75 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-----~--~-~~~~~~~~~~~E~~~l~~l~--~~~-i~~~--~~~~~~~lv   75 (246)
                      .||.|....||++.... +  ...++||.     .  . .-+....+...|...|+...  .|. +.++  .+.....++
T Consensus         2 EigdGnlN~VfrV~~~~-g--~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~v   78 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQE-G--DRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTV   78 (370)
T ss_pred             cCCCCceEEEEEEEcCC-C--CeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceeh
Confidence            47999999999998754 2  35678887     1  1 22445667778888887764  343 3344  566677799


Q ss_pred             EeccC
Q 036362           76 FEYTG   80 (246)
Q Consensus        76 ~e~~~   80 (246)
                      ||+++
T Consensus        79 MEdL~   83 (370)
T TIGR01767        79 MEDLS   83 (370)
T ss_pred             HhhCc
Confidence            99986

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.86  E-value=0.005  Score=49.79  Aligned_cols=125  Identities=13%  Similarity=0.054  Sum_probs=70.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCc--eEEe----------cCCceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL--IFRK----------ENDKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~----------~~~~~~~l   74 (246)
                      ++.++.|....+|++....    + .+++|.... ......+..|..++..|...+  +.+.          ...+..++
T Consensus        27 i~~~~~G~~n~~y~v~t~~----~-~~vLK~~~~-~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~  100 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDV----G-RYILTLYEK-RVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC  100 (307)
T ss_pred             ccccCCccccceEEEEeCC----C-cEEEEEecC-CCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence            4567777778999886533    3 567887322 112345666777777664222  2222          22456789


Q ss_pred             EEeccCcccHH-----------HHHhhhc-------cc-----ccchH-----------------HH-HHHHHHHHHh--
Q 036362           75 IFEYTGLLNLR-----------KVIKNFL-------DI-----INNPK-----------------TA-KILRVLSYYH--  111 (246)
Q Consensus        75 v~e~~~~~~L~-----------~~~~~~~-------~~-----~~~~~-----------------~~-qil~~L~~lH--  111 (246)
                      ++++++|.++.           ..+.+..       ..     .....                 .. .+...++++.  
T Consensus       101 l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~  180 (307)
T TIGR00938       101 LVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKF  180 (307)
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhh
Confidence            99999864321           1111100       00     00000                 00 1223444553  


Q ss_pred             -----hCceeeccCCCCCeEEecCCCeeeEEE
Q 036362          112 -----SNRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       112 -----~~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                           ..+++|+|+.+.||+++.++ ...++|
T Consensus       181 ~~~~~~~~l~HgD~~~~Nvl~~~~~-~~~vID  211 (307)
T TIGR00938       181 WPRDLPRGVIHADLFPDNVLFDGDS-VKGVID  211 (307)
T ss_pred             hhhcCCCccCCCCCCcCcEEEECCc-eEEEee
Confidence                 26899999999999998655 457888

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=96.79  E-value=0.0047  Score=50.18  Aligned_cols=70  Identities=10%  Similarity=-0.060  Sum_probs=41.9

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----CCceEEe-------cCCceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----YPLIFRK-------ENDKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~-------~~~~~~~l   74 (246)
                      ++.|+.|....+|......    + .+++|+..  ......+..|...+..|.     .|.+++.       ...+..++
T Consensus        27 ~~~l~~G~~n~~y~v~t~~----g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~   99 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTTQ----G-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAA   99 (319)
T ss_pred             cchhccccccceEEEEeCC----C-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEE
Confidence            3456777778899887543    3 57788732  223344555666555553     3333332       22456789


Q ss_pred             EEeccCccc
Q 036362           75 IFEYTGLLN   83 (246)
Q Consensus        75 v~e~~~~~~   83 (246)
                      ++++++|..
T Consensus       100 l~~~l~G~~  108 (319)
T PRK05231        100 IVTFLEGKW  108 (319)
T ss_pred             EEEecCCCC
Confidence            999999653

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.79  E-value=0.0026  Score=52.77  Aligned_cols=71  Identities=13%  Similarity=0.084  Sum_probs=48.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhcc-----c--cCCCCCcchhhhhhcccccCC--CCc-eEEe--cCCceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKA-----D--IIPDGVPISILTKISPLKEMD--YPL-IFRK--ENDKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-----~--~~~~~~~~~~~~E~~~l~~l~--~~~-i~~~--~~~~~~~l   74 (246)
                      .+.||.|.-..||++.... .  +..++||.     .  ..-+-...+...|.++|+...  .|. +.++  .+.....+
T Consensus        34 ~~eigdGnlN~VfrV~~~~-~--~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~  110 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQ-K--NISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCC  110 (409)
T ss_pred             eeEcCCCceEEEEEEeeCC-C--CceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhH
Confidence            5678999999999998743 2  34577777     1  111344567777888888764  343 3344  56667778


Q ss_pred             EEeccC
Q 036362           75 IFEYTG   80 (246)
Q Consensus        75 v~e~~~   80 (246)
                      |||+++
T Consensus       111 vMEdL~  116 (409)
T PRK12396        111 VMEDLS  116 (409)
T ss_pred             HHHhCc
Confidence            888886

>PLN02236 choline kinase

Probab=96.64  E-value=0.019  Score=47.29  Aligned_cols=75  Identities=13%  Similarity=0.073  Sum_probs=45.3

Q ss_pred             eeeeCCccceEEEEEEEcccc-cchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEeccCc
Q 036362            7 VELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEYTGL   81 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~~~~   81 (246)
                      +..|-.|-...+|++...... .....+++|+..........-.+|..+++.+..    |.++....++   .|.+|+++
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g---~v~efi~g  117 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG---RVEEFIHA  117 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc---eEEEeeCC
Confidence            345666888899998753211 113578889844333333344778888888853    4444332222   57888886


Q ss_pred             ccH
Q 036362           82 LNL   84 (246)
Q Consensus        82 ~~L   84 (246)
                      .++
T Consensus       118 ~~l  120 (344)
T PLN02236        118 RTL  120 (344)
T ss_pred             CCC
Confidence            665

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.17  E-value=0.039  Score=42.15  Aligned_cols=96  Identities=21%  Similarity=0.201  Sum_probs=61.3

Q ss_pred             hhhhhhccccCCCC-CcchhhhhhcccccCCCCceEEe--cCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHH
Q 036362           30 YQTVLLKADIIPDG-VPISILTKISPLKEMDYPLIFRK--ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRV  106 (246)
Q Consensus        30 ~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~--~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~  106 (246)
                      +..+..|+...... ...-+.++.+++.+++  .|+++  .++..+.+++|+|--...          .+......=+++
T Consensus        86 G~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~NDn~~~yGvIlE~Cy~~~i----------~~~N~i~agi~~  153 (308)
T PF07387_consen   86 GPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKNDNNYKYGVILERCYKIKI----------NFSNFITAGIKD  153 (308)
T ss_pred             chhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecCCCceeEEEEeeccCccc----------chhHHHHHhHHH
Confidence            55555555222222 3445567777777664  57777  556678899999872211          011111123677


Q ss_pred             HHHHhh--CceeeccCCCCCeEEecCCCeeeEEE
Q 036362          107 LSYYHS--NRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       107 L~~lH~--~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      |.-.|+  .+.+|||-.|+||+=|+.| ..|+.|
T Consensus       154 L~~fH~~~~~~lHGD~np~NiM~D~~G-~lKlVD  186 (308)
T PF07387_consen  154 LMDFHSENQHCLHGDCNPDNIMCDKFG-YLKLVD  186 (308)
T ss_pred             HHHhhccCCCeecCCCChhheeecCCC-CEEecC
Confidence            888884  5799999999999999888 567766

The function of this family is unknown.

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.01  E-value=0.05  Score=45.61  Aligned_cols=70  Identities=11%  Similarity=0.152  Sum_probs=43.8

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhcccc-----CCC---CCcchhhhhhcccccCC--C-CceEEe--cCCceEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----IPD---GVPISILTKISPLKEMD--Y-PLIFRK--ENDKLVY   73 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----~~~---~~~~~~~~E~~~l~~l~--~-~~i~~~--~~~~~~~   73 (246)
                      .+.||.|....||+.....     ..++||...     .+.   ....+...|...|+.+.  . ..+.++  .+.+..+
T Consensus        37 ~~eiggGn~N~VyrV~~~~-----~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~v  111 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSSS-----GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMAL  111 (418)
T ss_pred             EEEcCCCceeeEEEEEcCC-----ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCE
Confidence            5678999999999987633     357888822     222   24455566666666553  1 233333  3345678


Q ss_pred             EEEeccCc
Q 036362           74 QIFEYTGL   81 (246)
Q Consensus        74 lv~e~~~~   81 (246)
                      ++||++++
T Consensus       112 lvME~L~~  119 (418)
T PLN02756        112 IGMRYLEP  119 (418)
T ss_pred             EEEeecCC
Confidence            88999974

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.00  E-value=0.00057  Score=59.14  Aligned_cols=115  Identities=12%  Similarity=-0.005  Sum_probs=72.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCc-eEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL-IFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~----~~~~~~~lv~e   77 (246)
                      +|.....+++|+++++++.+...+   . ....+.    ........-++++|.+++||| .+..    ......++.++
T Consensus       243 ws~~fh~fvK~altknpKkRptae---k-lL~h~f----vs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~  314 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAE---K-LLQHPF----VSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR  314 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChh---h-heecee----eccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence            456677789999999999887662   2 222443    112245566789999999999 4444    34568889999


Q ss_pred             ccCcc-cHHHHHh----hhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEec
Q 036362           78 YTGLL-NLRKVIK----NFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL  129 (246)
Q Consensus        78 ~~~~~-~L~~~~~----~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~  129 (246)
                      ++.++ +-..-..    ......+....+.-..+|+++|+..=+|+|    ||+..+
T Consensus       315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~  367 (829)
T KOG0576|consen  315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE  367 (829)
T ss_pred             hhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc
Confidence            99866 1111110    001112222223556688999988778888    777654

>PRK10593 hypothetical protein; Provisional

Probab=95.71  E-value=0.018  Score=46.40  Aligned_cols=99  Identities=11%  Similarity=0.049  Sum_probs=61.5

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC------CCceEEe----cCCceEEEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD------YPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~----~~~~~~~lv~   76 (246)
                      .+.||+|..+.||.....+    + .+++|... .......+..|...|+.+.      .|-|+..    ...+..++||
T Consensus        19 ~~~i~~G~~~~vy~~~~~~----~-~~~~k~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         19 VECISEQPYAALWALYDSQ----G-NPMPLMAR-SFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             eeecCCccceeEEEEEcCC----C-CEEEEEec-ccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            4679999999999986544    2 45667622 1123458888988887663      4444433    1236689999


Q ss_pred             eccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhC
Q 036362           77 EYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN  113 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~  113 (246)
                      |+++|.++.+. .. ..........+++.+|.-||+.
T Consensus        93 E~i~G~~~~~~-~~-~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         93 ERLRGVSVEAP-AR-TPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             eccCCEecCCC-CC-CHHHHHHHHHHHHHHHHHHhCC
Confidence            99998877541 10 0001122223566788888874

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.70  E-value=0.029  Score=44.68  Aligned_cols=25  Identities=24%  Similarity=0.351  Sum_probs=20.1

Q ss_pred             ceeeccCCCCCeEEecCCCeeeEEE
Q 036362          114 RCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       114 ~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      .++|+|+.|.||+++.++.-..++|
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviD  210 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLID  210 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEEC
Confidence            4899999999999996443456777

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=95.61  E-value=0.016  Score=43.34  Aligned_cols=94  Identities=13%  Similarity=0.033  Sum_probs=63.0

Q ss_pred             hhhhcccccCCC-CceEEe-cCCceEEEEEeccCcccHH-------HHHhhhcccccchHHHHHHHHHHHHhh---Ccee
Q 036362           49 LTKISPLKEMDY-PLIFRK-ENDKLVYQIFEYTGLLNLR-------KVIKNFLDIINNPKTAKILRVLSYYHS---NRCL  116 (246)
Q Consensus        49 ~~E~~~l~~l~~-~~i~~~-~~~~~~~lv~e~~~~~~L~-------~~~~~~~~~~~~~~~~qil~~L~~lH~---~~i~  116 (246)
                      ..|.-+++.+++ +++.++ ..-+ ..++.||.+.+++.       ++... +...-..++++++..+.+++.   ..+.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG-~~~v~E~~~~~~~~~~~~~l~~~~~~-~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG-RFYVVEYVGAGSLYGIYRPLSQFLQS-PWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC-CEEEEEeecCcccccccccccccccc-CHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            457777888865 566676 3333 35688998866553       33221 111222344499999999987   4577


Q ss_pred             eccCCCCCeEEecCCCeeeEEEeehhhHH
Q 036362          117 HGRLNPYQALINLSDYTVKIARLISVGCI  145 (246)
Q Consensus       117 H~Dikp~Nil~~~~~~~~~~~Di~slG~i  145 (246)
                      -.|++|+|+-++.++ ..+++|+=.++..
T Consensus        85 lcDv~~~nfgv~~~~-~lk~iDld~v~~~  112 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDG-RLKLIDLDDVFVE  112 (188)
T ss_pred             EeecchHHeEEeCCC-cEEEEechhcchh
Confidence            799999999999655 7999997666553

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.43  E-value=0.029  Score=44.90  Aligned_cols=71  Identities=14%  Similarity=0.234  Sum_probs=41.7

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC------CCceEEe-cCCceEEEEEe
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD------YPLIFRK-ENDKLVYQIFE   77 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~-~~~~~~~lv~e   77 (246)
                      +-.+.++.|....+|+...   .  +..+.+|...  ......+..|..-|+.|.      -|-++.. ...+..+++||
T Consensus        20 ~~~~~v~GG~i~~a~~~~~---~--~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle   92 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLDT---D--GGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE   92 (288)
T ss_dssp             -EEEEE--SSSSEEEEEET---T--S-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred             eeeEecCCCChhheEEEEC---C--CccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence            3456789999999998873   3  5678899833  444567888888887773      3444444 44556699999


Q ss_pred             ccCcc
Q 036362           78 YTGLL   82 (246)
Q Consensus        78 ~~~~~   82 (246)
                      |++.+
T Consensus        93 ~l~~~   97 (288)
T PF03881_consen   93 FLEMG   97 (288)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            98844

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00384 choline kinase; Provisional

Probab=95.08  E-value=0.11  Score=43.31  Aligned_cols=79  Identities=11%  Similarity=0.026  Sum_probs=44.8

Q ss_pred             eeeeCCccceEEEEEEEccccc---chhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-cCCceEEEEEeccCcc
Q 036362            7 VELIGRGKYGSFYKCEEDVAEN---AYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-ENDKLVYQIFEYTGLL   82 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-~~~~~~~lv~e~~~~~   82 (246)
                      ++.|..|-...+|++.......   ..+.|+++...........-.+|+.+++.+...++.+. .....-+++.||++|.
T Consensus        55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~g~l~efIeGr  134 (383)
T PTZ00384         55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGDFTIQEWVEGN  134 (383)
T ss_pred             EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCCEEEEEEeccc
Confidence            4466678889999997543110   00124444433333333445668889888865554433 1112236899999876


Q ss_pred             cHH
Q 036362           83 NLR   85 (246)
Q Consensus        83 ~L~   85 (246)
                      +|.
T Consensus       135 ~l~  137 (383)
T PTZ00384        135 TMG  137 (383)
T ss_pred             cCC
Confidence            653

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.96  E-value=0.042  Score=45.22  Aligned_cols=126  Identities=17%  Similarity=0.155  Sum_probs=72.5

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccc----------------------cCCCCCcchh-----hhhhcccccC
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----------------------IIPDGVPISI-----LTKISPLKEM   58 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----------------------~~~~~~~~~~-----~~E~~~l~~l   58 (246)
                      |-..|..|.-+-||.|....    +..+|||+.                      .....++..+     ..|++-|.++
T Consensus       148 inGCiSTGKEANVYHat~~d----G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl  223 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEED----GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL  223 (520)
T ss_pred             cccccccCccceeEeeecCC----CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence            34567888889999998776    666888881                      1222222222     2366667666


Q ss_pred             CCCceEEe--cCCceEEEEEeccCcccHHHH--Hhhhc--ccccchHHHHHHHHHH-HHhhCceeeccCCCCCeEEecCC
Q 036362           59 DYPLIFRK--ENDKLVYQIFEYTGLLNLRKV--IKNFL--DIINNPKTAKILRVLS-YYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        59 ~~~~i~~~--~~~~~~~lv~e~~~~~~L~~~--~~~~~--~~~~~~~~~qil~~L~-~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      +...|..-  .-=....|||++++ .+-+-.  ++...  ...+...-.|++.-.. -.|..++||.||.--|+|+- +|
T Consensus       224 ~~aGIP~PePIlLk~hVLVM~FlG-rdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-dG  301 (520)
T KOG2270|consen  224 NNAGIPCPEPILLKNHVLVMEFLG-RDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-DG  301 (520)
T ss_pred             HhcCCCCCCceeeecceEeeeecc-CCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-CC
Confidence            65553211  11245689999998 332211  12111  1122222224443332 23567999999999999998 34


Q ss_pred             CeeeEEE
Q 036362          132 YTVKIAR  138 (246)
Q Consensus       132 ~~~~~~D  138 (246)
                       ...++|
T Consensus       302 -~lyiID  307 (520)
T KOG2270|consen  302 -KLYIID  307 (520)
T ss_pred             -EEEEEE
Confidence             566677

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=94.59  E-value=0.025  Score=47.06  Aligned_cols=62  Identities=18%  Similarity=0.131  Sum_probs=40.6

Q ss_pred             ceEEEEEeccCcccHHHHHhhhcccc-cchHHH-HHHHHH-HHHhhCceeeccCCCCCeEEecCC
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFLDII-NNPKTA-KILRVL-SYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~-qil~~L-~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ....++-+|..|.++..+++..+... +..... -..+|| +.+--.+++|.|+.|.||++....
T Consensus       318 ~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  318 TDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             ccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            45667888889999999987644322 222222 222333 444557899999999999986443

>PTZ00296 choline kinase; Provisional

Probab=92.76  E-value=0.45  Score=40.64  Aligned_cols=76  Identities=14%  Similarity=0.063  Sum_probs=44.7

Q ss_pred             ceeeeCCccceEEEEEEEcccc-----cchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEE
Q 036362            6 KVELIGRGKYGSFYKCEEDVAE-----NAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIF   76 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~   76 (246)
                      -++.|..|-.-.+|++.....+     ..++.|++|+..........-.+|..+++.+..    |.++....   -+.+.
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f~---gg~I~  185 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTFS---GGRIE  185 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEeC---CCEEE
Confidence            3456777877889988754211     013468888854444444455668888877754    33332222   24578


Q ss_pred             eccCcccH
Q 036362           77 EYTGLLNL   84 (246)
Q Consensus        77 e~~~~~~L   84 (246)
                      +|++|.+|
T Consensus       186 efi~g~~l  193 (442)
T PTZ00296        186 EWLYGDPL  193 (442)
T ss_pred             EeeCCccC
Confidence            88886533

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=92.48  E-value=0.034  Score=47.20  Aligned_cols=62  Identities=19%  Similarity=0.341  Sum_probs=51.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccCCCCceEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   66 (246)
                      ++++....+|.|+||+|+.+..+. .  ...+|||.  .........+..+|...+..+.|++++.+
T Consensus        49 ~~~e~~~~~~~~g~~~~~~~~n~~-d--~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~  112 (516)
T KOG1033|consen   49 NDFEPGQCLGRGGFGVVFSAQNKA-D--ENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRY  112 (516)
T ss_pred             ccccccccccccCccccCCccccc-c--chhhHHHHhcccchhhhhhhhhccccchhhhcccchhhh
Confidence            567888999999999999998876 4  55778887  44555667788999999999999999876

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=91.76  E-value=0.036  Score=38.08  Aligned_cols=44  Identities=14%  Similarity=0.144  Sum_probs=33.9

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccccc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKE   57 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~   57 (246)
                      +.||.|+.|+||+|+.+.    ++.||+|+  ..+.....+...+.+++.
T Consensus        17 ~PlasASiaQVh~a~l~~----g~~VaVKV--~rP~i~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKD----GEEVAVKV--QRPGIEEQIEADLRILRR   60 (119)
T ss_pred             chhhheehhhheeeeecc----cchhhhhh--cchHHHHHHHHHHHHHHH
Confidence            578999999999999887    88999998  344555566666666654

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=90.56  E-value=1.7  Score=35.10  Aligned_cols=24  Identities=13%  Similarity=0.072  Sum_probs=20.3

Q ss_pred             CceeeccCCCCCeEEecCCCeeeEEE
Q 036362          113 NRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       113 ~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      .+++|||+.+.||+++. + .+.++|
T Consensus       187 ~~liHgD~~~~Nil~~~-~-~i~lID  210 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-N-EVYVID  210 (313)
T ss_pred             CceEcCCCCcccEEEeC-C-cEEEEE
Confidence            57999999999999986 3 467888

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG3021 consensus Predicted kinase [General function prediction only]

Probab=89.60  E-value=0.46  Score=36.27  Aligned_cols=76  Identities=13%  Similarity=0.027  Sum_probs=53.6

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe--------cCCceEEEEEec
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK--------ENDKLVYQIFEY   78 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~~~~lv~e~   78 (246)
                      ++.+|+-+-|++-.++.-.|.  .-++.+|+...  .....+.-|+.-|..+...+.+.+        ..++..++||||
T Consensus        14 vr~~gs~gggcI~~~r~ydtD--aG~~FvK~nr~--~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~   89 (313)
T KOG3021|consen   14 VRALGSVGGGCISDGRHYDTD--AGKVFVKVNRS--IARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEH   89 (313)
T ss_pred             eeeecCCCCceeccccccccC--CccEEEEeccc--cchHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeeh
Confidence            566777677778778766644  55677888332  566788888888888876665554        346778999999


Q ss_pred             cCcccHHH
Q 036362           79 TGLLNLRK   86 (246)
Q Consensus        79 ~~~~~L~~   86 (246)
                      ++-..|.+
T Consensus        90 idf~~lr~   97 (313)
T KOG3021|consen   90 IDFQGLRS   97 (313)
T ss_pred             hhcccchh
Confidence            98555543

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=89.44  E-value=0.24  Score=37.59  Aligned_cols=38  Identities=32%  Similarity=0.378  Sum_probs=24.8

Q ss_pred             ceeeccCCCCCeEEecCCCeeeEEE---------eehhhHHHHHHhh
Q 036362          114 RCLHGRLNPYQALINLSDYTVKIAR---------LISVGCIFAEMVI  151 (246)
Q Consensus       114 ~i~H~Dikp~Nil~~~~~~~~~~~D---------i~slG~i~~~l~~  151 (246)
                      -+.|+|+.|.||+++..+....++|         .|-+|..+.+...
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f~e~~~  190 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFFCEWNF  190 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHHHHTTE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHHHHHcC
Confidence            5889999999999944455788889         6777777766643

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=88.38  E-value=0.78  Score=37.57  Aligned_cols=120  Identities=16%  Similarity=0.101  Sum_probs=72.4

Q ss_pred             cceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCce------EEe------cCCc--eEEEEEecc
Q 036362           14 KYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI------FRK------ENDK--LVYQIFEYT   79 (246)
Q Consensus        14 ~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i------~~~------~~~~--~~~lv~e~~   79 (246)
                      .-..||.....+    +. +++|+.... .....+..|+..+..+.-..|      ...      .-..  +.+-+++|+
T Consensus        37 ~eN~~f~~~~~~----g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l  110 (331)
T COG2334          37 EENSNFRVQTED----GR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYL  110 (331)
T ss_pred             ccCceEEEEecC----CC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEec
Confidence            445688887765    33 389984444 567778888888887742222      111      1234  788899999


Q ss_pred             CcccHHH------------HHh-------hhc---cccc--chHH-------------------HHHHHHHHHHhhC---
Q 036362           80 GLLNLRK------------VIK-------NFL---DIIN--NPKT-------------------AKILRVLSYYHSN---  113 (246)
Q Consensus        80 ~~~~L~~------------~~~-------~~~---~~~~--~~~~-------------------~qil~~L~~lH~~---  113 (246)
                      +|..+..            .+.       .+.   ....  ..+.                   .++...+..+.+.   
T Consensus       111 ~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~  190 (331)
T COG2334         111 PGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPA  190 (331)
T ss_pred             CCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchh
Confidence            9776662            110       110   0000  0010                   1555566666542   


Q ss_pred             -----c--eeeccCCCCCeEEecCCCeeeEEEe
Q 036362          114 -----R--CLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus       114 -----~--i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                           +  +||+|+.|.||+++.++..+.++|+
T Consensus       191 ~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDF  223 (331)
T COG2334         191 HLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDF  223 (331)
T ss_pred             hCCcccceeeecCCCccceeEcCCCCeeeEEEc
Confidence                 3  9999999999999966544678884

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=88.14  E-value=0.52  Score=37.38  Aligned_cols=37  Identities=16%  Similarity=0.267  Sum_probs=29.6

Q ss_pred             ceeeccCCCCCeEEecCCCeeeEEE---------eehhhHHHHHHhh
Q 036362          114 RCLHGRLNPYQALINLSDYTVKIAR---------LISVGCIFAEMVI  151 (246)
Q Consensus       114 ~i~H~Dikp~Nil~~~~~~~~~~~D---------i~slG~i~~~l~~  151 (246)
                      -++|+|+.|+|++.+..+ ...++|         .|-+|.++.+-..
T Consensus       154 v~cH~Dl~~~N~l~t~~~-~l~LIDWEyAg~~D~~~DLA~~~~e~~~  199 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKG-GLFLIDWEYAGLNDPAFDLAALLSEYIF  199 (269)
T ss_pred             eeecCCCCccceEEcCCC-cEEEEecccCCCccHHHHHHHHHHHhcc
Confidence            488999999999999645 678888         6778777776654

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=87.36  E-value=0.74  Score=36.14  Aligned_cols=75  Identities=9%  Similarity=-0.102  Sum_probs=51.9

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhh---cccccCCCCceEEe--cCCceEEEEEecc-
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKI---SPLKEMDYPLIFRK--ENDKLVYQIFEYT-   79 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~---~~l~~l~~~~i~~~--~~~~~~~lv~e~~-   79 (246)
                      ....+..|..+.|+.++...    +...++|+.....    ....|.   ..|+.-+-...+++  .+...-.+++|.+ 
T Consensus         6 ~~~~~~~g~~s~V~pv~~~d----G~~avLKl~~p~~----~~~~E~~g~~~L~~w~G~GaVrll~~d~~~~AlLLErl~   77 (253)
T PF04655_consen    6 PDGPPAHGSSSLVVPVRRAD----GTPAVLKLAPPHA----EAEHEARGEAALRWWNGRGAVRLLAADPERGALLLERLD   77 (253)
T ss_pred             cCCCCCCCcceEEEEEEcCC----CCeEEEEecCCcc----cchhhhhHHhHhheeCCCCceeeeccccccchhhhhhcc
Confidence            34456778999999998766    7789999832222    223333   55777777888888  5555778999998 


Q ss_pred             CcccHHHHH
Q 036362           80 GLLNLRKVI   88 (246)
Q Consensus        80 ~~~~L~~~~   88 (246)
                      ++.+|.+..
T Consensus        78 ~g~~L~~~~   86 (253)
T PF04655_consen   78 PGRSLASLP   86 (253)
T ss_pred             CCCchhhcc
Confidence            556776554

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PRK06148 hypothetical protein; Provisional

Probab=87.06  E-value=0.77  Score=43.61  Aligned_cols=38  Identities=18%  Similarity=0.299  Sum_probs=27.5

Q ss_pred             CceeeccCCCCCeEEecCC--CeeeEEE---------eehhhHHHHHHh
Q 036362          113 NRCLHGRLNPYQALINLSD--YTVKIAR---------LISVGCIFAEMV  150 (246)
Q Consensus       113 ~~i~H~Dikp~Nil~~~~~--~~~~~~D---------i~slG~i~~~l~  150 (246)
                      +++||+|+++.|||++.++  ....++|         ++-+++.+++++
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~~~v~DLAialay~~  251 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVHAPRICEVAIAAAYAI  251 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccccccHHHHHHHHHHHHh
Confidence            5799999999999999764  3456788         455666554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	246
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-26
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-26
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		8e-26
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-25
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-25
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-25
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-25
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-25
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-25
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-25
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-25
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-25
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-25
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-25
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-25
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-25
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-25
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-25
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-25
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-25
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-25
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-25
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-25
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-25
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-25
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-25
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-25
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-25
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-25
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-25
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-25
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-25
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-25
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-25
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-25
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-25
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-25
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-25
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-22
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-22
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-21
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		6e-21
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-20
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-16
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-15
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-15
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-15
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-15
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-15
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-14
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		7e-14
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		9e-14
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		5e-13
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-10
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		5e-10
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		6e-10
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-09
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		1e-08
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		2e-08
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-08
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-08
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		6e-08
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-08
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		6e-08
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		7e-08
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		7e-08
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		7e-08
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		7e-08
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		7e-08
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		7e-08
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		7e-08
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		7e-08
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		7e-08
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		7e-08
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		7e-08
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		8e-08
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		8e-08
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		8e-08
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		8e-08
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		8e-08
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		8e-08
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		8e-08
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		8e-08
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		8e-08
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		8e-08
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		8e-08
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		8e-08
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		9e-08
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-07
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-07
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-07
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		6e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-07
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		6e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		7e-07
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		7e-07
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		7e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		7e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		7e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		8e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		8e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		8e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		8e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		8e-07
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		8e-07
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		8e-07
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		8e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		8e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		8e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		8e-07
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		8e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		8e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		8e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		8e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		8e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		8e-07
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		8e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		8e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		8e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		9e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		9e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		9e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		9e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		9e-07
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		9e-07
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		9e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		9e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		9e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		9e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		9e-07
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		9e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		9e-07
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		9e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		9e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-06
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-06
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-06
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-06
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-06
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-06
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		4e-06
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		5e-06
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-06
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-06
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		5e-06
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		5e-06
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		5e-06
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		6e-06
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		6e-06
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		6e-06
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		6e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		7e-06
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		9e-06
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		9e-06
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-05
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-05
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		4e-05
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		4e-05
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-05
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		6e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		7e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-05
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		7e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		7e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		8e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		8e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-05
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		8e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		8e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		9e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-04
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-04
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		4e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-04
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		7e-04
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		7e-04

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           S+ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
           ++ HS+R LH  L P   LIN      L+D             YT ++  L         
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
           ++ HS+R LH  L P   LIN      L+D             YT ++  L         
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 5   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 65  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 3   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 63  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K+F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 5   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 65  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 9   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 69  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 3   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 63  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 6   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 66  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 6   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 66  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 4   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 64  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 3   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 63  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 5   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 65  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 4   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 64  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 9   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 69  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 3   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 63  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 134/293 (45%), Gaps = 59/293 (20%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           MEKY  +E IG G YG  YK + +  E  A + + L+ +   +G+P + + +IS LKE+ 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELK 58
Query: 60  YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAK-----ILRVL 107
           +  I +        K +  +FE+     L + +K  LD+        TAK     +L  +
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
           +Y H  R LH  L P   LIN                   +  YT +I  L         
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT    
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
           +   +   EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 4   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 64  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 4   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L   +K+F+D          +      ++L+ L
Sbjct: 64  PNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 5   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L   +K+F+D          +      ++L+ L
Sbjct: 65  PNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 59/293 (20%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           MEKY  +E IG G YG  YK + +  E  A + + L+ +   +G+P + + +IS LKE+ 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELK 58
Query: 60  YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAK-----ILRVL 107
           +  I +        K +  +FE+     L + +K  LD+        TAK     +L  +
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
           +Y H  R LH  L P   LIN                   +  YT ++  L         
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT    
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
           +   +   EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 59/293 (20%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           MEKY  +E IG G YG  YK + +  E  A + + L+ +   +G+P + + +IS LKE+ 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELK 58
Query: 60  YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAK-----ILRVL 107
           +  I +        K +  +FE+     L + +K  LD+        TAK     +L  +
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
           +Y H  R LH  L P   LIN                   +  YT ++  L         
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT    
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
           +   +   EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     + + +K F+D          +      ++L+ L
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEH-----VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
           ++ HS+R LH  L P   LIN      L+D             YT ++  L         
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 49/291 (16%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 3   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVI-KNFLDIINNPKTA----KILRVLSYYH 111
           P I +       +  +Y +FE+  + +L+K +  + L  I  P       ++L+ L++ H
Sbjct: 63  PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 112 SNRCLHGRLNPYQALIN------LSDYTVKIA---------------------------- 137
           S+R LH  L P   LIN      L+D+ +  A                            
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 138 -----RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                 + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   +   
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 49/291 (16%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 5   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVI-KNFLDIINNPKTA----KILRVLSYYH 111
           P I +       +  +Y +FE+  + +L+K +  + L  I  P       ++L+ L++ H
Sbjct: 65  PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 112 SNRCLHGRLNPYQALIN------LSDYTVKIA---------------------------- 137
           S+R LH  L P   LIN      L+D+ +  A                            
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 138 -----RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                 + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   +   
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 57/293 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 2   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     L + +K F+D          +      ++L+ L
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 57/294 (19%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++P
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 62  LIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVLS 108
            I +       +  +Y +FE+     L + +K F+D          +      ++L+ L+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 109 YYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------- 137
           + HS+R LH  L P   LIN      L+D+ +  A                         
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 138 --------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF 189
                    + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
              + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  110 bits (275), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 5   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61  PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
           P I +       +  +Y +FE+     + + +K F+D          +      ++L+ L
Sbjct: 65  PNIVKLLDVIHTENKLYLVFEH-----VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
           ++ HS+R LH  L P   LIN      L+D+ +  A                        
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                     + S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           +   + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV 
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 56/293 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           MEKY+K+E +G G YG  YK ++      A + + L A+   +G+P + + +IS LKE+ 
Sbjct: 20  MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELH 77
Query: 60  YP----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYH 111
           +P    LI    +++ +  +FE+    +L+KV+      + + +      ++LR +++ H
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
            +R LH  L P   LIN SD  +K+A                                  
Sbjct: 137 QHRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI- 190
                  + S+GCIFAEM+  +PL    ++  +   IF ++G P+    P V    P   
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL-PLWK 254
Query: 191 -YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
              ++  E K  + ++P     G+DLL  ML  +P +RI+  DA+NH Y++D+
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 56/293 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           MEKY+K+E +G G YG  YK ++      A + + L A+   +G+P + + +IS LKE+ 
Sbjct: 20  MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELH 77
Query: 60  YP----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYH 111
           +P    LI    +++ +  +FE+    +L+KV+      + + +      ++LR +++ H
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
            +R LH  L P   LIN SD  +K+A                                  
Sbjct: 137 QHRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI- 190
                  + S+GCIFAEM+  +PL    ++  +   IF ++G P+    P V    P   
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL-PLWK 254
Query: 191 -YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
              ++  E K  + ++P     G+DLL  ML  +P +RI+  DA+NH Y++D+
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 127/295 (43%), Gaps = 61/295 (20%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M+KY K+E IG G YG+ +K +            ++ D   +GVP S L +I  LKE+ +
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIIN---NPKTAK-----ILRVLS 108
             I R  +    DK +  +FE+       + +K + D  N   +P+  K     +L+ L 
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 109 YYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------- 137
           + HS   LH  L P   LIN      L+D+ +  A                         
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 138 --------RLISVGCIFAEMV-IQEPL--SEDASESRERISIFRLMGEPSEETLPGVTTF 186
                    + S GCIFAE+     PL    D  +  +R  IFRL+G P+EE  P +T  
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKR--IFRLLGTPTEEQWPSMTKL 233
Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
             +           L  ++P L   G DLLQ +L+ NP +RI+  +AL H Y+ D
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 62/293 (21%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
           ME Y K++ +G G Y + YK +  + +N  A + + L+ +   +G P + + ++S LK++
Sbjct: 1   METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDL 57
Query: 59  DYPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLD----IINNPKTA----KILRV 106
            +  I    +    +K +  +FEY     L K +K +LD    IIN         ++LR 
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRG 112
Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
           L+Y H  + LH  L P   LIN      L+D+ +  A+ I                    
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF 187
                         VGCIF EM    PL   ++   +   IFR++G P+EET PG+ +  
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 188 PF-IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            F  Y Y +   + L    P L+  G DLL K+L+   + RI+  DA+ H ++
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 123/293 (41%), Gaps = 57/293 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M+KY K+E IG G YG+ +K +            ++ D   +GVP S L +I  LKE+ +
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 61  PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIIN---NPKTAK-----ILRVLS 108
             I R  +    DK +  +FE+       + +K + D  N   +P+  K     +L+ L 
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 109 YYHSNRCLHGRLNPYQALINLSD-------------------YTVKIARL---------- 139
           + HS   LH  L P   LIN +                    Y+ ++  L          
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 140 ----------ISVGCIFAEMV-IQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                      S GCIFAE+     PL        +   IFRL+G P+EE  P +T    
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
           +           L  ++P L   G DLLQ +L+ NP +RI+  +AL H Y+ D
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 65/297 (21%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           +++YR++  +G G YG  YK  + V         ++ +   +GVP + + ++S LKE+ +
Sbjct: 33  IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 61  PLIFRKE----NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA---------KILRVL 107
             I   +    ++  ++ IFEY         +K ++D   NP  +         +++  +
Sbjct: 93  RNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMD--KNPDVSMRVIKSFLYQLINGV 145
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYT---------VKIAR-------------------- 138
           ++ HS RCLH  L P   L+++SD +           +AR                    
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 139 ---------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
                          + S+ CI+AEM+++ PL    SE  +   IF ++G P + T PGV
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265
Query: 184 TTFFPFIYCYEESEPKDLA-ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           T    +   + +   K L  +L   L+  G+DLL  ML ++P +RI+  +AL H Y+
Sbjct: 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 70/302 (23%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
           ++Y  V  IG G YG  +K  +   +N  + V LK        +G+P+S + +++ L+ +
Sbjct: 11  QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 59  ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
                       D   + R + +  +  +FE+     + + +  +LD +  P        
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 123
Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIA-------- 137
               ++LR L + HS+R +H  L P   L      I L+D      Y+ ++A        
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 138 -----------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             L SVGCIFAEM  ++PL   +S+  +   I  ++G P EE  
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
           P         +  + ++P  +   + D++  G DLL K L  NP +RI+   AL+H Y++
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 241 DV 242
           D+
Sbjct: 302 DL 303

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 70/302 (23%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
           ++Y  V  IG G YG  +K  +   +N  + V LK        +G+P+S + +++ L+ +
Sbjct: 11  QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 59  ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
                       D   + R + +  +  +FE+     + + +  +LD +  P        
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 123
Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIA-------- 137
               ++LR L + HS+R +H  L P   L      I L+D      Y+ ++A        
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 138 -----------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             L SVGCIFAEM  ++PL   +S+  +   I  ++G P EE  
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
           P         +  + ++P  +   + D++  G DLL K L  NP +RI+   AL+H Y++
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 241 DV 242
           D+
Sbjct: 302 DL 303

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)
Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKE-- 57
           +Y  V  IG G YG+ YK  +    ++   V LK+  +P   +G+PIS + +++ L+   
Sbjct: 5   RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 58  ----------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
                     MD     R + +  V  +FE+     + + ++ +LD    P         
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKD 116
Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
              + LR L + H+N  +H  L P   L+  S  TVK+A                     
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             + SVGCIFAEM  ++PL    SE+ +   IF L+G P E+  
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 181 PGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           P   +     FP         P+ +  ++P++E +G  LL +ML  NP +RI+   AL H
Sbjct: 236 PRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 237 HY 238
            Y
Sbjct: 290 SY 291

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)
Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKE-- 57
           +Y  V  IG G YG+ YK  +    ++   V LK+  +P   +G+PIS + +++ L+   
Sbjct: 5   RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 58  ----------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
                     MD     R + +  V  +FE+     + + ++ +LD    P         
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKD 116
Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
              + LR L + H+N  +H  L P   L+  S  TVK+A                     
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             + SVGCIFAEM  ++PL    SE+ +   IF L+G P E+  
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 181 PGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           P   +     FP         P+ +  ++P++E +G  LL +ML  NP +RI+   AL H
Sbjct: 236 PRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 237 HY 238
            Y
Sbjct: 290 SY 291

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)
Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKE-- 57
           +Y  V  IG G YG+ YK  +    ++   V LK+  +P   +G+PIS + +++ L+   
Sbjct: 5   RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 58  ----------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
                     MD     R + +  V  +FE+     + + ++ +LD    P         
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKD 116
Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
              + LR L + H+N  +H  L P   L+  S  TVK+A                     
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             + SVGCIFAEM  ++PL    SE+ +   IF L+G P E+  
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 181 PGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           P   +     FP         P+ +  ++P++E +G  LL +ML  NP +RI+   AL H
Sbjct: 236 PRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 237 HY 238
            Y
Sbjct: 290 SY 291

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 70/300 (23%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
           ++Y  V  IG G YG  +K  +   +N  + V LK        +G+P+S + +++ L+ +
Sbjct: 11  QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 59  ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
                       D   + R + +  +  +FE+     + + +  +LD +  P        
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 123
Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIA-------- 137
               ++LR L + HS+R +H  L P   L      I L+D      Y+ ++A        
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 138 -----------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
                             L SVGCIFAEM  ++PL   +S+  +   I  ++G P EE  
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
           P         +  + ++P  +   + D++  G DLL K L  NP +RI+   AL+H Y++
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 73/303 (24%)
Query: 3   KYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           +++++E +G G Y + YK          A + V L ++   +G P + + +IS +KE+ +
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKH 62
Query: 61  PLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLD---IINNPK----------TAK 102
             I R        +KL   +FE+     +   +K ++D   + N P+            +
Sbjct: 63  ENIVRLYDVIHTENKLTL-VFEF-----MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 103 ILRVLSYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------- 137
           +L+ L++ H N+ LH  L P   LIN      L D+ +  A                   
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 138 --------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
                          + S GCI AEM+  +PL    ++  +   IF +MG P+E   P V
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 184 TTFFPFIYCYEESEPKDL-AILLPD----LEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
           T    +    ++  P+DL  +L P     L+   +D L  +L++NP  R++   AL+H +
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 239 YRD 241
           + +
Sbjct: 297 FAE 299

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 76/301 (25%)
Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG------VPISILTKISPLK 56
           +Y  V  IG G YG+ YK  +    ++   V LK+  +P+G      +PIS + +++ L+
Sbjct: 10  RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 57  E------------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA--- 101
                        MD     R + +  V  +FE+     + + ++ +LD    P      
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAET 121
Query: 102 ------KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------- 138
                 + LR L + H+N  +H  L P   L+  S  TVK+A                  
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVV 180
Query: 139 ---------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE 177
                                + SVGCIFAEM  ++PL    SE+ +   IF L+G P E
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           +  P   +       +    P+ +  ++P++E +G  LL +ML  NP +RI+   AL H 
Sbjct: 241 DDWPRDVSL--PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298
Query: 238 Y 238
           Y
Sbjct: 299 Y 299

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 58/298 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI---SILTKISPLKE 57
           MEKY K+  IG G YG  +KC      +  Q V +K  +  +  P+     L +I  LK+
Sbjct: 2   MEKYEKIGKIGEGSYGVVFKCRN---RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ 58
Query: 58  MDYP-------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYY 110
           + +P       +  RK    LV++  ++T L  L +  +   + +    T + L+ +++ 
Sbjct: 59  LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 111 HSNRCLHGRLNP------YQALINLSDYTVKIARLIS----------------------- 141
           H + C+H  + P        ++I L D+    ARL++                       
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFG--FARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 142 ------------VGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPGVTTFF 187
                       +GC+FAE++   PL    S+  +   I + +G+  P  + +     +F
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV 245
             +   +  + + L +  P++    + LL+  L ++P ER+T    L+H Y+ ++  +
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI 294

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 123/307 (40%), Gaps = 86/307 (28%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA------DIIPDGVPISILTKISPL 55
           ++Y K++ +G G++ + YK  +   +N  Q V +K           DG+  + L +I  L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARD---KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 66
Query: 56  KEMDYPLIF-------RKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----I 103
           +E+ +P I         K N  LV+   E     +L  +IK+   ++  P   K      
Sbjct: 67  QELSHPNIIGLLDAFGHKSNISLVFDFMET----DLEVIIKDN-SLVLTPSHIKAYMLMT 121
Query: 104 LRVLSYYHSNRCLHGRLNPYQALIN------LSDYTVK--------------IAR----- 138
           L+ L Y H +  LH  L P   L++      L+D+ +               + R     
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE------ 178
                         + +VGCI AE++++ P     S+  +   IF  +G P+EE      
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241
Query: 179 TLPGVTTF--FPFIYCYE--ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL 234
           +LP   TF  FP I  +    +   DL           +DL+Q +   NP  RIT   AL
Sbjct: 242 SLPDYVTFKSFPGIPLHHIFSAAGDDL-----------LDLIQGLFLFNPCARITATQAL 290
Query: 235 NHHYYRD 241
              Y+ +
Sbjct: 291 KMKYFSN 297

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 112/299 (37%), Gaps = 73/299 (24%)
Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKIS-PLKEMDYP 61
           +Y +++ IG G YG        +  +AY  V      I    P    T     L+E+   
Sbjct: 44  RYTQLQYIGEGAYG--------MVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQIL 95
Query: 62  LIFRKENDKLVYQIFEYTGLLNLRKV--IKNFLDI----------INNPKTA----KILR 105
           L FR EN   +  I   + L  +R V  +++ ++           ++N        +ILR
Sbjct: 96  LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR 155
Query: 106 VLSYYHSNRCLHGRLNPYQALINLS------------------DYT-------------- 133
            L Y HS   LH  L P   LIN +                  D+T              
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 134 ----------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
                      K   + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 184 TTFFPFIYCYEESEPKD----LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y   +S P       A L P  +   +DLL +ML  NP +RITV +AL H Y
Sbjct: 276 INMKARNYL--QSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPY 332

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 30/147 (20%)
Query: 126 LINLSDYTVKIARLISVGCIFAEM--VIQE------------------PLSEDASE---- 161
           LI L +   K   + S GCIFAE+  ++Q                   PLS D +     
Sbjct: 222 LILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVH 281
Query: 162 ---SRERISI-FRLMGEPSEETLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDL 215
              +R++++I F ++G P+E+ L  +       +I  +   +P +L    P +   G++L
Sbjct: 282 EKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341
Query: 216 LQKMLRVNPKERITVNDALNHHYYRDV 242
           L+ ML+ NP +RIT++ AL+H Y +DV
Sbjct: 342 LESMLKFNPNKRITIDQALDHPYLKDV 368

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT +   + SVGCI AEM+  + L + +    +   I ++ G P  E +  +
Sbjct: 195 EVILNWMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253
Query: 184 TT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            +     ++    E E KD A +L +  P  V+LL+KML ++ ++R+T  +AL H Y+
Sbjct: 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++  ++YT  I  L S+GC+F E+++ +PL    +   + + I ++MG P++E +  +
Sbjct: 211 ELMLGATEYTPSID-LWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRM 269
Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEPA-GVDLLQKMLRVNPKERITVNDALNHHYY 239
              +  +  +   + KD   +LP+  P+  +DLL+++LR  P  RI   +A+ H ++
Sbjct: 270 NPHYTEVR-FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 31/142 (21%)
Query: 131 DYTVKIARLISVGCIFAEMVIQE--------------------PLSEDASE-------SR 163
           +YT  I  + S GCIFAE++                       PLS D +        +R
Sbjct: 233 NYTNSID-IWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNR 291
Query: 164 ERISI-FRLMGEPSEETLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKML 220
           ++++I F ++G P EE L  +T      +I  +   +  DL+     +   G+DLL+ ML
Sbjct: 292 DQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESML 351
Query: 221 RVNPKERITVNDALNHHYYRDV 242
           R N ++RIT++ AL+H Y +DV
Sbjct: 352 RFNAQKRITIDKALSHPYLKDV 373

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------- 140
           ++LR L Y HS   LH  L P    IN  D  +KI     AR++                
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 141 ----------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                                 + GCIFAEM+  + L   A E  +   I   +    EE
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE 247
Query: 179 TLPGVTTFFPFIYCYEESEP-KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
               + +  P     + +EP K L  LLP +    VD L+++L  +P +R+T  +AL+H 
Sbjct: 248 DRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP 307
Query: 238 Y 238
           Y
Sbjct: 308 Y 308

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 42/186 (22%)
Query: 92  LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQA--LINLSDYTVKIARLISVGCIFAEM 149
           ++++  P T  + R L+ +   R        Y+A  LI L +   +   + S+GCIFAE+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRW-------YRAPELILLQENYTEAIDVWSIGCIFAEL 277
Query: 150 --VIQE------------------PLSEDASE----------SRERIS-IFRLMGEPSEE 178
             +I+E                  PLS D             +R++++ IF ++G PSEE
Sbjct: 278 LNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE 337
Query: 179 TLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
            +  +       +I  + + E  DLA   P      + LL++ML  NP +RIT+N+ L H
Sbjct: 338 DIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 237 HYYRDV 242
            ++++V
Sbjct: 398 PFFKEV 403

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
           Y
Sbjct: 312 Y 312

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
           Y
Sbjct: 312 Y 312

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
           + KY K+  IG+G +G  +K          Q V LK  ++    +G PI+ L +I  L+ 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 73
Query: 58  MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
           + +  +                    +Y +F++    +L  ++ N L      +  ++++
Sbjct: 74  LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
           +L     Y H N+ LH  +     LI       L+D+ +  A                  
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                               L   GCI AEM  + P+ +  +E  +   I +L G  + E
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
             P V  +        +   +      L   + D  P  +DL+ K+L ++P +RI  +DA
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 234 LNHHYY 239
           LNH ++
Sbjct: 311 LNHDFF 316

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 238 Y 238
           Y
Sbjct: 316 Y 316

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
           + KY K+  IG+G +G  +K          Q V LK  ++    +G PI+ L +I  L+ 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 73
Query: 58  MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
           + +  +                    +Y +F++    +L  ++ N L      +  ++++
Sbjct: 74  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
           +L     Y H N+ LH  +     LI       L+D+ +  A                  
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                               L   GCI AEM  + P+ +  +E  +   I +L G  + E
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
             P V  +        +   +      L   + D  P  +DL+ K+L ++P +RI  +DA
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 234 LNHHYY 239
           LNH ++
Sbjct: 311 LNHDFF 316

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
           + KY K+  IG+G +G  +K          Q V LK  ++    +G PI+ L +I  L+ 
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 72
Query: 58  MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
           + +  +                    +Y +F++    +L  ++ N L      +  ++++
Sbjct: 73  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
           +L     Y H N+ LH  +     LI       L+D+ +  A                  
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                               L   GCI AEM  + P+ +  +E  +   I +L G  + E
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
             P V  +        +   +      L   + D  P  +DL+ K+L ++P +RI  +DA
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 309
Query: 234 LNHHYY 239
           LNH ++
Sbjct: 310 LNHDFF 315

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
           Y
Sbjct: 312 Y 312

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 217 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEESEP- 198
           S GCI AE+ ++ P+        + + IF ++G P S+  L  + +  P    Y +S P 
Sbjct: 208 SCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPM 265
Query: 199 ---KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                L  + P + P G+DLLQ+ML  +P +RIT  +AL H Y
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 217 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 197 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 238 Y 238
           Y
Sbjct: 314 Y 314

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEESEP- 198
           S GCI AE+ ++ P+        + + IF ++G P S+  L  + +  P    Y +S P 
Sbjct: 208 SCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPM 265
Query: 199 ---KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                L  + P + P G+DLLQ+ML  +P +RIT  +AL H Y
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 202 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 203 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 318

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 194 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 309

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 202 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 195 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G PS+E L  +
Sbjct: 199 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEESEP- 198
           S GCI AE+ ++ P+        + + IF ++G P S+  L  + +  P    Y +S P 
Sbjct: 208 SCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPM 265
Query: 199 ---KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                L  + P + P G+DLLQ+ML  +P +RIT  +AL H Y
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 259
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 260 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 319
Query: 238 Y 238
           Y
Sbjct: 320 Y 320

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L  +       Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
           Y
Sbjct: 312 Y 312

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
           + KY K+  IG+G +G  +K          Q V LK  ++    +G PI+ L +I  L+ 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 73
Query: 58  MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
           + +  +                    +Y +F++    +L  ++ N L      +  ++++
Sbjct: 74  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
           +L     Y H N+ LH  +     LI       L+D+ +  A                  
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                               L   GCI AEM  + P+ +  +E  +   I +L G  + E
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
             P V  +        +   +      L   + D  P  +DL+ K+L ++P +RI  +DA
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 234 LNHHYY 239
           LNH ++
Sbjct: 311 LNHDFF 316

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + ++N   YT  I  + SVGCI AEM+   P+        +   I  ++G P +E L  +
Sbjct: 195 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                  Y         +    L P+ +   +DLL KML  NP +RI V  AL H Y
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 65/181 (35%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
           +ILR L Y HS   LH  L P   L+N +                  D+T          
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                          K   + SVGCI AEM+   P+        +   I  ++G PS+E 
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
           L          Y         +    L P+ +   +DLL KML  NP +RI V  AL H 
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 238 Y 238
           Y
Sbjct: 314 Y 314

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT--TFFPFIYCYEES 196
           + SVGCI AEM+  + L +      +   I ++ G P  E +  +       +I    ++
Sbjct: 207 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 266
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             KD   L P   P   DLL+KML ++  +R+T   AL H ++
Sbjct: 267 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT--TFFPFIYCYEES 196
           + SVGCI AEM+  + L +      +   I ++ G P  E +  +       +I    ++
Sbjct: 225 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 284
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             KD   L P   P   DLL+KML ++  +R+T   AL H ++
Sbjct: 285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 71  LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
           L+YQI      ++   +I   L      +N     KIL      H++  + G +    Y+
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYR 191
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
           A   ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L 
Sbjct: 192 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 250
Query: 182 GVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            +++     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 251 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 71  LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
           L+YQI      ++   +I   L      +N     KIL      H++  + G +    Y+
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYR 195
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
           A   ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L 
Sbjct: 196 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 254
Query: 182 GVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            +++     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 255 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 104 LRVLSYY---HSNRCLHGRLNP--YQA---LINLSDYTVKIARLISVGCIFAEMVIQEPL 155
           L++L +Y   H++  + G +    Y+A   ++N   Y  +   + SVGCI AE++    L
Sbjct: 164 LKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTL 222
Query: 156 SEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGV 213
                   +   I RL+G P  E L  +++     Y    ++ PK + A +     P  V
Sbjct: 223 FPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
Query: 214 DLLQKMLRVNPKERITVNDALNHHYY 239
           DLL+KML ++  +RIT   AL H Y+
Sbjct: 283 DLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN-----------LSDYTV---------------- 134
           +ILR L Y HS   +H  L P    +N           L+ +T                 
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                    +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 71  LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
           L+YQI      ++   +I   L      +N     KIL      H++  + G +    Y+
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYR 189
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
           A   ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L 
Sbjct: 190 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 248
Query: 182 GVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            +++     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN------LSDYTV--------------------- 134
           +ILR L Y HS   +H  L P    +N      + DY +                     
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPE 192
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                    +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN-----------LSDYTV---------------- 134
           +ILR L Y HS   +H  L P    +N           L+ +T                 
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                    +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN-----------LSDYTV---------------- 134
           +ILR L Y HS   +H  L P    +N           L+ +T                 
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                    +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGXVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 189
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILGFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDGGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMXGYVATRWYRAP 214
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 190
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 71  LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
           L+YQI      ++   +I   L      +N     KIL      H++  + G +    Y+
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYR 209
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
           A   ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L 
Sbjct: 210 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 268
Query: 182 GVTTFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
            +++     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 269 KISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 198
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDRGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDAGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 214
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
           +ILR L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 201
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                         + SVGCI AE++    L        +   I RL+G P  E L  ++
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
           +     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 259 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++    L        +   I RL+G P  E L  +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y    ++ PK + A +     P  VDLL+KML ++  +RIT   AL H Y+
Sbjct: 259 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI-DVWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 153 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 210
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 211 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 270
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 271 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 310

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 164 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 221
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 222 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 281
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 282 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 165 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID-VWSA 222
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 223 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 282
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 283 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 322

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 180 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 237
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 238 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 297
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 298 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 337

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 160 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 217
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 218 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 277
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 278 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 317

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 156 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 213
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 214 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 273
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 274 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 313

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 164 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI-DVWSA 221
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 222 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 281
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 282 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 171 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 228
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 229 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 288
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 289 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 328

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 188 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 245
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 246 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 305
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +  P   P  + L  ++L   P  R+T  +A  H ++
Sbjct: 306 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 186 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 243
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 303
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +  P   P  + L  ++L   P  R+T  +A  H ++
Sbjct: 304 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 231 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 288
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 289 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 348
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 349 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 388

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 157 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 214
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 215 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 274
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 275 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 314

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 190 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 247
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 248 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 307
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +  P   P  + L  ++L   P  R+T  +A  H ++
Sbjct: 308 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
           +++ +P TA +L++  +  + + + G  N        Y+A   +   +DYT  I  + S 
Sbjct: 186 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI-DVWSA 243
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
           GC+ AE+++ +P+    S   + + I +++G P+ E +    P  T F FP I  +  ++
Sbjct: 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 303
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 304 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           +   ++YT  I  + S GC+ AE++  +PL    S   + + I +++G PS E +  +  
Sbjct: 213 IFGATNYTTNID-IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271
Query: 186 FFPFIYCYEESEPKDLA-ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            +   + + +  P   + +  P   P  +DL+ ++L   P  R+T  +AL H ++ ++
Sbjct: 272 NY-MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 257
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 207 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 263
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 264 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 319

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 202 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 258
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 259 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 202 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 258
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 259 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 209 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 265
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 266 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 257
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 302
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 209 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 265
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 266 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++  + L   +    +   I  ++G PS E L  +++
Sbjct: 192 MLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 250
Query: 186 FFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y   +S P    KDL+ +     P  +DLL +ML ++  +R++  +AL H Y+
Sbjct: 251 EHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++  + L   +    +   I  ++G PS E L  +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 186 FFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y   +S P    KDL+ +     P  +DLL +ML ++  +R++  +AL H Y+
Sbjct: 259 EHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y  +   + SVGCI AE++  + L   +    +   I  ++G PS E L  +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 186 FFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                Y   +S P    KDL+ +     P  +DLL +ML ++  +R++  +AL H Y+
Sbjct: 259 EHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 302
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   +  P L P  +                DLL KML ++P +RI+V+DAL H Y
Sbjct: 303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
           ++N   Y + +  + SVGCI AE++    L        +   I RL G P    +  + +
Sbjct: 223 MLNWMHYNMTV-DIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPS 281
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
                +I    +   ++ A +     P  VDLL+KML ++  +RIT ++AL H Y+
Sbjct: 282 HEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP--GV 183
           +++L +YT  I  L SVGCIF EM+ +  L    +   +   I  ++G PS   +   G 
Sbjct: 234 MLSLHEYTQAI-DLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292
Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                +I      +P     + P  +   + LL +MLR  P  RI+   AL H +
Sbjct: 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP--GV 183
           +++L +YT  I  L SVGCIF EM+ +  L    +   +   I  ++G PS   +   G 
Sbjct: 235 MLSLHEYTQAI-DLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 293
Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                +I      +P     + P  +   + LL +MLR  P  RI+   AL H +
Sbjct: 294 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 348

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 94  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 94  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 94  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 94  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 115 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 174
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 175 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 234
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 235 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRK 294
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 295 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 342

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 94  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 95  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 154
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 155 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 214
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 215 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 274
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 275 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 95  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 154
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 155 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 214
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 215 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 274
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 275 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 96  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 155
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 156 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 215
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 216 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 275
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 276 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 323

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63  IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
           I R ++ K    IFEY    + + +     D        ++L+ L Y HS   +H  + P
Sbjct: 94  IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
           +  +I+                     +Y V++A                     + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
           C+FA M+  +EP         + + I +++G               +P  E L G  +  
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           P++  +  ++ + L      + P  +D L K+LR + +ER+T  +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/292 (21%), Positives = 116/292 (39%), Gaps = 56/292 (19%)
Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKE 57
           MEKY  + L+G G YG   KC     ++  + V +K  +  D    V    + +I  LK+
Sbjct: 24  MEKYENLGLVGEGSYGMVMKCRN---KDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 58  MDYPLIF-------RKENDKLVYQIFEYTGLLNLRKVIKNFLDI-INNPKTAKILRVLSY 109
           + +  +        +K+   LV++  ++T L +L ++  N LD  +      +I+  + +
Sbjct: 81  LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 110 YHSNRCLHGRLNPYQALIN------LSDYTV----------------------------- 134
            HS+  +H  + P   L++      L D+                               
Sbjct: 140 CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 135 ----KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPGVTTFFP 188
               K   + ++GC+  EM + EPL    S+  +   I   +G   P  + L      F 
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
            +   E  E + L    P L    +DL +K L ++P +R    + L+H +++
Sbjct: 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 134 VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
            K+  + S GC+ AEM  ++ L   ++   +   I  ++G P  E +   ++  P    Y
Sbjct: 212 TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS--PSARDY 269
Query: 194 EESE-----PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             +       +    ++P  +P  +DL+ KML  NP+ RI+   AL H Y+
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 134 VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
            K+  + S GC+ AEM  ++ L   ++   +   I  ++G P  E +   ++  P    Y
Sbjct: 212 TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS--PSARDY 269
Query: 194 EESE-----PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
             +       +    ++P  +P  +DL+ KML  NP+ RI+   AL H Y+
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 132 YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF- 186
           YT  +  + SVGCIFAEM++ EP+    + + +   I R++G PS E L    P  T   
Sbjct: 209 YTTAVD-IWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD 267
Query: 187 ------FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
                  P+   + +   KD             DLL  +L+  P+ER+   +AL H Y+ 
Sbjct: 268 LYNSKGIPWSNVFSDHSLKDAK--------EAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 241 DV 242
           ++
Sbjct: 320 EL 321

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  E+V    + +      +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
           K   I   +L P  +                DLL KML ++P +RI+V++AL H Y
Sbjct: 265 KYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 320

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  E+V    + +      +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 206 IWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ---PTVRNYVENRP 262
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
               I   +L P  +                DLL KML ++P +RI+V++AL H Y
Sbjct: 263 AYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL K  +   GV   +  ++     + +P I R   
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S+  +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 139 KPENLLLG-SNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 196
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G+  F    Y         +    PD    G  DL+ ++L+ N  +R+T+ 
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 232 DALNHHYYRDVVSVP 246
           + L H + +   S P
Sbjct: 257 EVLEHPWIKANSSKP 271

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL K  +   GV   +  ++     + +P I R   
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMVIQ----EPLSEDASESR---ERISIFRLM 172
            P   L+  S+  +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 139 KPENLLLG-SNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 196
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G+  F    Y         +    PD    G  DL+ ++L+ N  +R+T+ 
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 232 DALNHHYYRDVVSVP 246
           + L H + +   S P
Sbjct: 257 EVLEHPWIKANSSKP 271

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
           + L+  + YT  I  + S+GCI  E++  +P+   +S   +   I  ++  PS E +  +
Sbjct: 200 EILLGSTKYTKGID-MWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESI 258
Query: 184 TTFFPFIYCYEESEPKDLAI--------------LLPDLEPAG------VDLLQKMLRVN 223
            +  PF     ES  + + I              LL  + P        +DLL K+L+ N
Sbjct: 259 QS--PFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316
Query: 224 PKERITVNDALNH 236
           P +RI+ NDAL H
Sbjct: 317 PNKRISANDALKH 329

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 52/274 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           ++Y++V+ +G G YG    C++ +  AE A + ++ K+ +       ++L +++ LK++D
Sbjct: 21  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 60  YPLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS 112
           +P I +       K N  LV +++    L +   + + F ++       ++L   +Y H 
Sbjct: 80  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 113 NRCLHGRLNP---------YQALINLSDYTV--------KIARLISVGCIFAEMVIQEPL 155
           +  +H  L P           ALI + D+ +        K+   +      A  V+++  
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 199
Query: 156 SEDASESRERISIFRLM-------GEPSEETL----PGVTTFFPFIYCYEESEPKDLAIL 204
            E        + ++ L+       G+  +E L     G  +F P  +     E K L  L
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 259
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                         ML   P +RI+  +ALNH +
Sbjct: 260 --------------MLTYEPSKRISAEEALNHPW 279

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 52/274 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           ++Y++V+ +G G YG    C++ +  AE A + ++ K+ +       ++L +++ LK++D
Sbjct: 4   DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 60  YPLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS 112
           +P I +       K N  LV +++    L +   + + F ++       ++L   +Y H 
Sbjct: 63  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 113 NRCLHGRLNP---------YQALINLSDYTV--------KIARLISVGCIFAEMVIQEPL 155
           +  +H  L P           ALI + D+ +        K+   +      A  V+++  
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 182
Query: 156 SEDASESRERISIFRLM-------GEPSEETL----PGVTTFFPFIYCYEESEPKDLAIL 204
            E        + ++ L+       G+  +E L     G  +F P  +     E K L  L
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 242
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                         ML   P +RI+  +ALNH +
Sbjct: 243 --------------MLTYEPSKRISAEEALNHPW 262

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 114/280 (40%), Gaps = 53/280 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E Y++V+ +G G YG    C + V        +++   +       +L +++ LK +D+P
Sbjct: 37  EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 62  LIFRKENDKLVYQIFE----YTGLLNLRKVIKNFLDIINNPK---------TAKILRVLS 108
            I +      +Y  FE    Y  ++   K  + F +II+  K           ++L  ++
Sbjct: 97  NIMK------LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVT 150
Query: 109 YYHSNRCLHGRLNP---------YQALINLSDYTV--------KIARLISVGCIFAEMVI 151
           Y H +  +H  L P           ALI + D+ +        K+   +      A  V+
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 152 QEPLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAIL 204
           ++   E        + +F L+       G+  +E L  V       Y ++  E K+++  
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE---KGKYTFDSPEWKNVS-- 265
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS 244
                    DL+++ML+ + + RI+   AL H + +++ S
Sbjct: 266 -----EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           L SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 202 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 258
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 259 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 314

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS-------------ESR---E 164
            P   L+  S   +KIA             +  P S  A+             E R   E
Sbjct: 138 KPENLLLG-SAGELKIADF--------GWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVN 223
           ++ ++ L G    E L G   F    Y         +    PD    G  DL+ ++L+ N
Sbjct: 189 KVDLWSL-GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 224 PKERITVNDALNHHYYRDVVSVP 246
           P +R  + + L H +     S P
Sbjct: 248 PSQRPMLREVLEHPWITANSSKP 270

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 40/268 (14%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++Y+   ++G+G +G    C++ +  +     V+ K  +       S+L ++  LK++D+
Sbjct: 32  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 61  PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
           P I +      +Y+ FE           YTG     ++I  K F ++       ++L  +
Sbjct: 92  PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 145
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           +Y H N+ +H  L P   L+        I R+I  G   +         +D   +   I+
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFG--LSTHFEASKKMKDKIGTAYYIA 202
Query: 168 IFRLMG---EPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPDLEP--- 210
              L G   E  +    GV  +     C            ++ E       LP  +    
Sbjct: 203 PEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE 262
Query: 211 AGVDLLQKMLRVNPKERITVNDALNHHY 238
           +  DL++KML   P  RI+  DAL+H +
Sbjct: 263 SAKDLIRKMLTYVPSMRISARDALDHEW 290

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           L SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 213 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 269
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 270 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 325

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G PS E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS-------------ESR---E 164
            P   L+  S   +KIA             +  P S  A+             E R   E
Sbjct: 135 KPENLLLG-SAGELKIADF--------GWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVN 223
           ++ ++ L G    E L G   F    Y         +    PD    G  DL+ ++L+ N
Sbjct: 186 KVDLWSL-GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 224 PKERITVNDALNHHYYRDVVSVP 246
           P +R  + + L H +     S P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           L SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 45/275 (16%)
Query: 4   YRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DY 60
           Y   E+IG+G +    +C   E   + A + V +       G+    L + + +  M  +
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61  P----LIFRKENDKLVYQIFEYTGLLNL-----RKVIKNFL--DIINNPKTAKILRVLSY 109
           P    L+    +D ++Y +FE+    +L     ++    F+  + + +    +IL  L Y
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 110 YHSNRCLHGRLNPYQAL---------INLSDYTVKI----ARLISVGCIFA------EMV 150
            H N  +H  + P   L         + L D+ V I    + L++ G +        E+V
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 151 IQEPLSEDASESRERISIFRLMGEPSEETLPGVTT----FFPFIYCYEESEPKDLAILLP 206
            +EP  +        + +F L+       LP   T    F   I    +  P+  +    
Sbjct: 206 KREPYGKPVDVWGCGVILFILL----SGCLPFYGTKERLFEGIIKGKYKMNPRQWS---- 257
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
            +  +  DL+++ML ++P ERITV +ALNH + ++
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++Y+   ++G+G +G    C++ +  +     V+ K  +       S+L ++  LK++D+
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61  PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
           P I +      +Y+ FE           YTG     ++I  K F ++       ++L  +
Sbjct: 86  PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           +Y H N+ +H  L P   L+        I R+I  G             E + + +++I 
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKMKDKIG 190
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
                    +     E  +    GV  +     C            ++ E       LP 
Sbjct: 191 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
            +    +  DL++KML   P  RI+  DAL+H +
Sbjct: 251 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++Y+   ++G+G +G    C++ +  +     V+ K  +       S+L ++  LK++D+
Sbjct: 50  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 61  PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
           P I +      +Y+ FE           YTG     ++I  K F ++       ++L  +
Sbjct: 110 PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 163
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           +Y H N+ +H  L P   L+        I R+I  G             E + + +++I 
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKMKDKIG 214
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
                    +     E  +    GV  +     C            ++ E       LP 
Sbjct: 215 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 274
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
            +    +  DL++KML   P  RI+  DAL+H +
Sbjct: 275 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++Y+   ++G+G +G    C++ +  +     V+ K  +       S+L ++  LK++D+
Sbjct: 49  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 61  PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
           P I +      +Y+ FE           YTG     ++I  K F ++       ++L  +
Sbjct: 109 PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 162
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           +Y H N+ +H  L P   L+        I R+I  G             E + + +++I 
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKMKDKIG 213
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
                    +     E  +    GV  +     C            ++ E       LP 
Sbjct: 214 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 273
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
            +    +  DL++KML   P  RI+  DAL+H +
Sbjct: 274 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 195
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 196 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 254
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 255 REVLEHPWITANSSKP 270

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 140 KPENLLLG-SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSL- 197
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLR 257
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 258 EVLEHPWITANSSKP 272

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 15  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 75  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 133
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 134 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 191
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 192 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 250
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 251 REVLEHPWITANSSKP 266

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMVIQ----EPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 138 KPENLLLG-SAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 195
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 256 EVLEHPWITANSSKP 270

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E+Y  V ++G+G +G   KC++ + +  Y   ++      +    +IL ++  LK++D+P
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62  LIFR----KENDKLVYQIFE-YTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYYHS 112
            I +     E+    Y + E YTG     ++IK      +    A+I++     ++Y H 
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK 139
Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
           +  +H  L P   L+   +    I ++I  G   +    Q    +D   +   I+   L 
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDI-KIIDFG--LSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 173 G---EPSEETLPGVTTFF-----PFIYCYEE------SEPKDLAILLPD---LEPAGVDL 215
           G   E  +    GV  +      P  Y   E       E    A  LP    +     DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 216 LQKMLRVNPKERITVNDALNHHY 238
           ++KML  +P  RIT    L H +
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPW 279

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 20  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 139 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 196
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 197 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 255
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 256 REVLEHPWITANSSKP 271

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E+Y  V ++G+G +G   KC++ + +  Y   ++      +    +IL ++  LK++D+P
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62  LIFR----KENDKLVYQIFE-YTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYYHS 112
            I +     E+    Y + E YTG     ++IK      +    A+I++     ++Y H 
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK 139
Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
           +  +H  L P   L+   +    I ++I  G   +    Q    +D   +   I+   L 
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDI-KIIDFG--LSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 173 G---EPSEETLPGVTTFF-----PFIYCYEE------SEPKDLAILLPD---LEPAGVDL 215
           G   E  +    GV  +      P  Y   E       E    A  LP    +     DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 216 LQKMLRVNPKERITVNDALNHHY 238
           ++KML  +P  RIT    L H +
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPW 279

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 23/248 (9%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 195
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 196 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 254
Query: 231 NDALNHHY 238
            + L H +
Sbjct: 255 REVLEHPW 262

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 192
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 193 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 251
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 252 REVLEHPWITANSSKP 267

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL--DYLPPEMIEGRMHDEKVDLWSL 192
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 193 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 251
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 252 REVLEHPWITANSSKP 267

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 197
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 198 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 256
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 257 REVLEHPWITANSSKP 272

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 78  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMVIQ----EPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 137 KPENLLLG-SAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 194
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 254
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 255 EVLEHPWITANSSKP 269

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 253 EVLEHPWITANSSKP 267

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 253 EVLEHPWITANSSKP 267

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 81  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 140 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 197
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 258 EVLEHPWITANSSKP 272

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 21/247 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 138 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL- 195
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 232 DALNHHY 238
           + L H +
Sbjct: 256 EVLEHPW 262

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 218
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 219 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 277
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 278 REVLEHPWITANSSKP 293

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 79  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 138 KPENLLLG-SAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 195
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 256 EVLEHPWITANSSKP 270

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 253 EVLEHPWITANSSKP 267

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 93  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 151
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 152 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 209
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 210 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 268
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 269 REVLEHPWITANSSKP 284

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 76  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 253 EVLEHPWITANSSKP 267

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 4   YRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DY 60
           Y   E+IG+G +    +C   E   + A + V +       G+    L + + +  M  +
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 61  P----LIFRKENDKLVYQIFEYTGLLNL-----RKVIKNFL--DIINNPKTAKILRVLSY 109
           P    L+    +D ++Y +FE+    +L     ++    F+  + + +    +IL  L Y
Sbjct: 88  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIF 169
            H N  +H  + P+  L+   + +  + +L   G     + IQ  L E    +  R+   
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPV-KLGGFG-----VAIQ--LGESGLVAGGRVGTP 199
Query: 170 RLM----------GEPSEETLPGVTTFFPFIYC---YEESEPKDLAIL----------LP 206
             M          G+P +    GV  F     C   Y   E     I+            
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 259
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
            +  +  DL+++ML ++P ERITV +ALNH + ++
Sbjct: 260 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 294

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 4   YRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DY 60
           Y   E+IG+G +    +C   E   + A + V +       G+    L + + +  M  +
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61  P----LIFRKENDKLVYQIFEYTGLLNL-----RKVIKNFL--DIINNPKTAKILRVLSY 109
           P    L+    +D ++Y +FE+    +L     ++    F+  + + +    +IL  L Y
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIF 169
            H N  +H  + P+  L+   + +  + +L   G     + IQ  L E    +  R+   
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPV-KLGGFG-----VAIQ--LGESGLVAGGRVGTP 197
Query: 170 RLM----------GEPSEETLPGVTTFFPFIYC---YEESEPKDLAIL----------LP 206
             M          G+P +    GV  F     C   Y   E     I+            
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
            +  +  DL+++ML ++P ERITV +ALNH + ++
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 78  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 137 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL- 194
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 254
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 255 EVLEHPWITANSSKP 269

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 121 NPYQALINLSDYTVKIARLISVGC---------IFAEMVIQEPLSEDASESRERISIFRL 171
            P   L+  S   +KIA      C         +   +    P   +     E++ ++ L
Sbjct: 136 KPENLLLG-SAGELKIADF-GWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 194 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 252
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 253 REVLEHPWITANSSKP 268

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
            P   L+  S   +KIA    SV    +         + L  +  E R   E++ ++ L 
Sbjct: 136 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 193
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 254 EVLEHPWITANSSKP 268

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 77  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 136 KPENLLLG-SAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 193
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 254 EVLEHPWITANSSKP 268

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 16  LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS + +H  +
Sbjct: 76  YFHDSTRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKKVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS-------------ESR---E 164
            P   L+  S   +KIA             +  P S  A+             E R   E
Sbjct: 135 KPENLLLG-SAGELKIADF--------GWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVN 223
           ++ ++ L G    E L G   F    Y         +    PD    G  DL+ ++L+ N
Sbjct: 186 KVDLWSL-GVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 224 PKERITVNDALNHHYYRDVVSVP 246
           P +R  + + L H +     S P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 209 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 265
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 266 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 23/248 (9%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E   +      VL KA +   GV   +  ++     + +P I R   
Sbjct: 13  LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 73  YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 131
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 132 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 189
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 190 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 248
Query: 231 NDALNHHY 238
            + L H +
Sbjct: 249 REVLEHPW 256

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPY 320

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
           + SVGCI  EM+    L        +   +   +G P  E +  +    P +  Y E+ P
Sbjct: 210 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 266
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
           K        L PD L PA             DLL KML ++  +RI+V++AL H Y
Sbjct: 267 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 322

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 120/319 (37%), Gaps = 99/319 (31%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP------LI 63
           +GRG YG  YK +    ++     L +  I   G+ +S   +I+ L+E+ +P       +
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQ--IEGTGISMSACREIALLRELKHPNVISLQKV 86
Query: 64  FRKENDKLVYQIFEYT-----GLLNLRKVIKNFLDIINNPKTA------KILRVLSYYHS 112
           F    D+ V+ +F+Y       ++   +  K     +  P+        +IL  + Y H+
Sbjct: 87  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 113 NRCLHGRLNP--------------------------------------------YQA--- 125
           N  LH  L P                                            Y+A   
Sbjct: 147 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 206
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPL----SEDASESR-----ERISIFRLMGEPS 176
           L+    YT K   + ++GCIFAE++  EP+     ED   S      +   IF +MG P+
Sbjct: 207 LLGARHYT-KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPA 265
Query: 177 E------ETLPGVTTFF------PFIYC----YEESEPKDLAILLPDLEPAGVDLLQKML 220
           +      + +P  +T         +  C    Y E        + PD +     LLQK+L
Sbjct: 266 DKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK-----VKPDSK--AFHLLQKLL 318
Query: 221 RVNPKERITVNDALNHHYY 239
            ++P +RIT   A+   Y+
Sbjct: 319 TMDPIKRITSEQAMQDPYF 337

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E+Y  V ++G+G +G   KC++ + +  Y   ++      +    +IL ++  LK++D+P
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62  LIFR----KENDKLVYQIFE-YTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYYHS 112
            I +     E+    Y + E YTG     ++IK      +    A+I++     ++Y H 
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK 139
Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
           +  +H  L P   L+   +    I ++I  G   +    Q    +D   +   I+   L 
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDI-KIIDFG--LSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 173 G---EPSEETLPGVTTFF-----PFIYCYEE------SEPKDLAILLPD---LEPAGVDL 215
           G   E  +    GV  +      P  Y   E       E    A  LP    +     DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 216 LQKMLRVNPKERITVNDALNHHY 238
           ++KML  +P  RIT    L H +
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPW 279

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 23/256 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY     + K ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
            P   L+       ++D+   +    S        +  + L  +  E R   E++ ++ L
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 197
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
            G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  +
Sbjct: 198 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 256
Query: 231 NDALNHHYYRDVVSVP 246
            + L H +     S P
Sbjct: 257 REVLEHPWITANSSKP 272

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY  L  + + ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 161 KPENLLLG-SAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 218
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 278
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 279 EVLEHPWITANSSKP 293

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 106/274 (38%), Gaps = 52/274 (18%)
Query: 2   EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++Y+   ++G+G +G    C++ +  +     V+ K  +       S+L ++  LK++D+
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61  PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
           P I +      +Y+ FE           YTG     ++I  K F ++       ++L  +
Sbjct: 86  PNIXK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           +Y H N+ +H  L P   L+        I R+I  G             E + + +++I 
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKXKDKIG 190
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
                    +     E  +    GV  +     C            ++ E       LP 
Sbjct: 191 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
            +    +  DL++K L   P  RI+  DAL+H +
Sbjct: 251 WKKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 21/255 (8%)
Query: 10  IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
           +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + +P I R   
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67  --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
              +   VY I EY     + K ++  L   +  +TA    ++   LSY HS R +H  +
Sbjct: 81  YFHDATRVYLILEYAPRGEVYKELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
            P   L+  S   +KIA    SV         +   +    P   +     E++ ++ L 
Sbjct: 140 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSL- 197
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
           G    E L G   F    Y         +    PD    G  DL+ ++L+ NP +R  + 
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 232 DALNHHYYRDVVSVP 246
           + L H +     S P
Sbjct: 258 EVLEHPWITANSSKP 272

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 68/227 (29%)
Query: 75  IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN------ 128
           +FEY    + +++ +   D        ++L+ L Y HS   +H  + P+  +I+      
Sbjct: 118 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKL 177
Query: 129 -------------LSDYTVKIAR--------------------LISVGCIFAEMVIQ-EP 154
                          +Y V++A                     + S+GC+ A M+ + EP
Sbjct: 178 RLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREP 237
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
                    + + I +++G               +P    + G  +   +  FI+    S
Sbjct: 238 FFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIH----S 293
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           E + L      + P  +DLL K+LR + ++R+T  +A+ H Y+  VV
Sbjct: 294 ENRHL------VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVV 334

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 68/227 (29%)
Query: 75  IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN------ 128
           +FEY    + +++ +   D        ++L+ L Y HS   +H  + P+  +I+      
Sbjct: 113 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKL 172
Query: 129 -------------LSDYTVKIAR--------------------LISVGCIFAEMVIQ-EP 154
                          +Y V++A                     + S+GC+ A M+ + EP
Sbjct: 173 RLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREP 232
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
                    + + I +++G               +P    + G  +   +  FI+    S
Sbjct: 233 FFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIH----S 288
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
           E + L      + P  +DLL K+LR + ++R+T  +A+ H Y+  VV
Sbjct: 289 ENRHL------VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVV 329

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	246
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-42
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-41
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-41
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	6e-40
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-39
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-39
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-38
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-38
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-38
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-37
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-37
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-36
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-31
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-31
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-27
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-26
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-26
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-24
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-23
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-23
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-22
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-22
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-21
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-21
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-21
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-20
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-19
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-18
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-18
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	6e-17
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-08
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-07
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	6e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	7e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	6e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	9e-04

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  144 bits (366), Expect = 4e-42
 Identities = 59/296 (19%), Positives = 115/296 (38%), Gaps = 60/296 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
           MEKY K+  IG G YG  +KC  +      Q V +K          +    L +I  LK+
Sbjct: 2   MEKYEKIGKIGEGSYGVVFKCR-NRDTG--QIVAIKKFLESEDDPVIKKIALREIRMLKQ 58

Query: 58  MDYPLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLS 108
           + +P +       +   +L + +FEY     +   +  +   +            L+ ++
Sbjct: 59  LKHPNLVNLLEVFRRKRRL-HLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVN 116

Query: 109 YYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------------------- 140
           + H + C+H  + P   LI      +K+     ARL+                       
Sbjct: 117 FCHKHNCIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV 175

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT--F 186
                       ++GC+FAE++   PL    S+  +   I + +G+         +T  +
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235

Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           F  +   +  + + L +  P++    + LL+  L ++P ER+T    L+H Y+ ++
Sbjct: 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  142 bits (360), Expect = 2e-41
 Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 59/294 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
           MEKY  +E IG G YG  YK + +  E    T  LK    +   +G+P + + +IS LKE
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGE----TFALKKIRLEKEDEGIPSTTIREISILKE 56

Query: 58  MDYPLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLS 108
           + +  I +  +     K +  +FE+    +L+K++      +    TAK     +L  ++
Sbjct: 57  LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLE-SVTAKSFLLQLLNGIA 114

Query: 109 YYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------------------- 140
           Y H  R LH  L P   LIN  +  +KI     AR                         
Sbjct: 115 YCHDRRVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT    
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233

Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           +   +   EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++ 
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  139 bits (352), Expect = 6e-40
 Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 64/300 (21%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
            ++Y  V  IG G YG  +K  +       + V LK        +G+P+S + +++ L+ 
Sbjct: 10  DQQYECVAEIGEGAYGKVFKARDLKNGG--RFVALKRVRVQTGEEGMPLSTIREVAVLRH 67

Query: 58  MDYPL------------IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK--- 102
           ++               + R + +  +  +FE+    +L   +    +     +T K   
Sbjct: 68  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126

Query: 103 --ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------- 140
             +LR L + HS+R +H  L P   L+  S   +K+     AR+                
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALTSVVVTLWY 185

Query: 141 ------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG 182
                             SVGCIFAEM  ++PL   +S+  +   I  ++G P EE  P 
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245

Query: 183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                P    +     + +   + D++  G DLL K L  NP +RI+   AL+H Y++D+
Sbjct: 246 DVAL-PR-QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  137 bits (347), Expect = 2e-39
 Identities = 82/301 (27%), Positives = 132/301 (43%), Gaps = 72/301 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
           MEKY+K+E +G G YG  YK ++         V LK    D   +G+P + + +IS LKE
Sbjct: 20  MEKYQKLEKVGEGTYGVVYKAKDSQGR----IVALKRIRLDAEDEGIPSTAIREISLLKE 75

Query: 58  MDYPLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLS 108
           + +P I    +   +++ +  +FE+    +L+KV+      +      K     +LR ++
Sbjct: 76  LHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ-DSQIKIYLYQLLRGVA 133

Query: 109 YYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------------------- 140
           + H +R LH  L P   LIN SD  +K+     AR                         
Sbjct: 134 HCHQHRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-- 186
                       S+GCIFAEM+  +PL    ++  +   IF ++G P+    P V     
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252

Query: 187 -----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
                F         E K  + ++P     G+DLL  ML  +P +RI+  DA+NH Y++D
Sbjct: 253 WKQRTFQ------VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

Query: 242 V 242
           +
Sbjct: 307 L 307

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  137 bits (347), Expect = 4e-39
 Identities = 58/301 (19%), Positives = 107/301 (35%), Gaps = 72/301 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
           MEKY  + L+G G YG   KC  +      + V +K          V    + +I  LK+
Sbjct: 24  MEKYENLGLVGEGSYGMVMKCR-NKDTG--RIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80

Query: 58  MDYP----L--IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVL 107
           + +     L  + +K+     Y +FE+     +   ++ F + ++     K    I+  +
Sbjct: 81  LRHENLVNLLEVCKKKKR--WYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGI 137

Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------------- 140
            + HS+  +H  + P   L++     VK+     AR +                      
Sbjct: 138 GFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELL 196

Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF- 186
                        ++GC+  EM + EPL    S+  +   I   +G              
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256

Query: 187 ------FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
                  P     E  E + L    P L    +DL +K L ++P +R    + L+H +++
Sbjct: 257 VFAGVRLP-----EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

Query: 241 D 241
            
Sbjct: 312 M 312

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  136 bits (344), Expect = 1e-38
 Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 58/294 (19%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
           ME Y K++ +G G Y + YK +  + +N  A + + L+ +   +G P + + ++S LK++
Sbjct: 1   METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDL 57

Query: 59  DYPLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSY 109
            +  I    +    +K +  +FEY    +L++ + +  +IIN     K     +LR L+Y
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIIN-MHNVKLFLFQLLRGLAY 115

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------------ 140
            H  + LH  L P   LIN     +K+     AR                          
Sbjct: 116 CHRQKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174

Query: 141 -----------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF 189
                       VGCIF EM    PL   ++   +   IFR++G P+EET PG+ +   F
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234

Query: 190 -IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
             Y Y +   + L    P L+  G DLL K+L+   + RI+  DA+ H ++  +
Sbjct: 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  135 bits (342), Expect = 1e-38
 Identities = 80/311 (25%), Positives = 121/311 (38%), Gaps = 76/311 (24%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK------ADIIPDGVPISILTKISP 54
             +Y  V  IG G YG+ YK   D        V LK            G+PIS + +++ 
Sbjct: 8   TSRYEPVAEIGVGAYGTVYKAR-DPHSG--HFVALKSVRVPNGGGGGGGLPISTVREVAL 64

Query: 55  LKEMDYPL---------IF---RKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK 102
           L+ ++            +    R + +  V  +FE+    +LR  +          +T K
Sbjct: 65  LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK 123

Query: 103 -----ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------ 140
                 LR L + H+N  +H  L P   L+  S  TVK+     AR+             
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVT 182

Query: 141 ---------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
                                SVGCIFAEM  ++PL    SE+ +   IF L+G P E+ 
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242

Query: 180 LPGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN 235
            P   +     FP         P+ +  ++P++E +G  LL +ML  NP +RI+   AL 
Sbjct: 243 WPRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296

Query: 236 HHYYRDVVSVP 246
           H Y       P
Sbjct: 297 HSYLHKDEGNP 307

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  133 bits (337), Expect = 5e-38
 Identities = 86/300 (28%), Positives = 129/300 (43%), Gaps = 69/300 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
           M+KY K+E IG G YG+ +K + +   +  + V LK    D   +GVP S L +I  LKE
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAK-NRETH--EIVALKRVRLDDDDEGVPSSALREICLLKE 57

Query: 58  MDYPLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLS 108
           + +  I R  +   +DK +  +FE+    +L+K   +    ++ P+  K     +L+ L 
Sbjct: 58  LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLD-PEIVKSFLFQLLKGLG 115

Query: 109 YYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------------------- 140
           + HS   LH  L P   LIN  +  +K+     AR                         
Sbjct: 116 FCHSRNVLHRDLKPQNLLIN-RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174

Query: 141 ------------SVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTF- 186
                       S GCIFAE+     PL        +   IFRL+G P+EE  P +T   
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234

Query: 187 ----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
               +P            L  ++P L   G DLLQ +L+ NP +RI+  +AL H Y+ D 
Sbjct: 235 DYKPYPMYP-----ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  133 bits (337), Expect = 1e-37
 Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 63/299 (21%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKE 57
           +++YR++  +G G YG  YK   D   N  +TV +K    +   +GVP + + ++S LKE
Sbjct: 33  IDRYRRITKLGEGTYGEVYKAI-DTVTN--ETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89

Query: 58  MDYPLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLS 108
           + +  I   K    ++  ++ IFEY    +L+K +    D+  + +  K     ++  ++
Sbjct: 90  LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDV--SMRVIKSFLYQLINGVN 146

Query: 109 YYHSNRCLHGRLNPYQALINLSDYT----VKI-----ARLI------------------- 140
           + HS RCLH  L P   L+++SD +    +KI     AR                     
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP 206

Query: 141 ----------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                           S+ CI+AEM+++ PL    SE  +   IF ++G P + T PGVT
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266

Query: 185 TFFPFIYCYEESEPKDLAILLPD-LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
               +   + +   K L  +L   L+  G+DLL  ML ++P +RI+  +AL H Y+   
Sbjct: 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  133 bits (337), Expect = 1e-37
 Identities = 64/296 (21%), Positives = 117/296 (39%), Gaps = 62/296 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK------ADIIPDGVPISILTKISP 54
            ++Y K++ +G G++ + YK   D   N  Q V +K           DG+  + L +I  
Sbjct: 9   AKRYEKLDFLGEGQFATVYKAR-DKNTN--QIVAIKKIKLGHRSEAKDGINRTALREIKL 65

Query: 55  LKEMDYPLIFR-KE---NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILR 105
           L+E+ +P I    +   +   +  +F++    +L  +IK+   ++  P   K      L+
Sbjct: 66  LQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKD-NSLVLTPSHIKAYMLMTLQ 123

Query: 106 VLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI-------------------- 140
            L Y H +  LH  L P   L++  +  +K+     A+                      
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPE 182

Query: 141 ---------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
                          +VGCI AE++++ P     S+  +   IF  +G P+EE  P + +
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242

Query: 186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
             P    ++      L  +        +DL+Q +   NP  RIT   AL   Y+ +
Sbjct: 243 L-PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  128 bits (323), Expect = 9e-36
 Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 73/306 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK-----ADIIPDGVPISILTKISPL 55
             +++++E +G G Y + YK            V LK     ++   +G P + + +IS +
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTG---VYVALKEVKLDSE---EGTPSTAIREISLM 57

Query: 56  KEMDYPLIFR-KE---NDKLVYQIFEY-----TGLLNLRKVIKNFLDIINNPKTAK---- 102
           KE+ +  I R  +    +  +  +FE+        ++ R V      +       K    
Sbjct: 58  KELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL--ELNLVKYFQW 115

Query: 103 -ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------- 140
            +L+ L++ H N+ LH  L P   LIN     +K+     AR                  
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY 174

Query: 141 -------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
                              S GCI AEM+  +PL    ++  +   IF +MG P+E   P
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234

Query: 182 GVTTFFPFIYCYEESEPKDLAILL-----PDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
            VT    +    ++  P+DL  +L       L+   +D L  +L++NP  R++   AL+H
Sbjct: 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294

Query: 237 HYYRDV 242
            ++ + 
Sbjct: 295 PWFAEY 300

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  117 bits (295), Expect = 2e-31
 Identities = 68/320 (21%), Positives = 114/320 (35%), Gaps = 97/320 (30%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAY--QTVLLK---ADIIPDGVPISILTKISPL 55
           + KY K+  IG+G +G  +K     A +    Q V LK    +   +G PI+ L +I  L
Sbjct: 16  VSKYEKLAKIGQGTFGEVFK-----ARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 70

Query: 56  KEMDYPLIFR------------KENDKLVYQIFEY-----TGLLNLRKV------IKNFL 92
           + + +  +                    +Y +F++      GLL+   V      IK  +
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 130

Query: 93  DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------- 140
                     +L  L Y H N+ LH  +     LI   D  +K+     AR         
Sbjct: 131 --------QMLLNGLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQ 181

Query: 141 --------------------------------SVGCIFAEMVIQEPLSEDASESRERISI 168
                                             GCI AEM  + P+ +  +E  +   I
Sbjct: 182 PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241

Query: 169 FRLMGEPSEETLPGVTTF-----FPFIYCYEESEPKDLAILLPDL--EPAGVDLLQKMLR 221
            +L G  + E  P V  +        +        + +   L     +P  +DL+ K+L 
Sbjct: 242 SQLCGSITPEVWPNVDNYELYEKLELVKGQ----KRKVKDRLKAYVRDPYALDLIDKLLV 297

Query: 222 VNPKERITVNDALNHHYYRD 241
           ++P +RI  +DALNH ++  
Sbjct: 298 LDPAQRIDSDDALNHDFFWS 317

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  117 bits (296), Expect = 3e-31
 Identities = 73/323 (22%), Positives = 117/323 (36%), Gaps = 86/323 (26%)

Query: 2   EKYRKVEL-IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           + +      +GRG YG  YK +    ++  +   LK  I   G+ +S   +I+ L+E+ +
Sbjct: 20  DLFEYEGCKVGRGTYGHVYKAKRKDGKDD-KDYALKQ-IEGTGISMSACREIALLRELKH 77

Query: 61  P----L--IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK------------ 102
           P    L  +F    D+ V+ +F+Y    +L  +IK       N K  +            
Sbjct: 78  PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136

Query: 103 ILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKI-----ARLI-------------- 140
           IL  + Y H+N  LH  L P   L+         VKI     ARL               
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196

Query: 141 ------------------------SVGCIFAEMVIQEPL----SEDASESRERIS----- 167
                                   ++GCIFAE++  EP+     ED   S          
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256

Query: 168 IFRLMGEPSEETLPGVT------TFFPFIYCY---EESEPKDLAILLPDLEPAGVDLLQK 218
           IF +MG P+++    +       T             S  K +       +     LLQK
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQK 316

Query: 219 MLRVNPKERITVNDALNHHYYRD 241
           +L ++P +RIT   A+   Y+ +
Sbjct: 317 LLTMDPIKRITSEQAMQDPYFLE 339

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  107 bits (269), Expect = 2e-27
 Identities = 56/299 (18%), Positives = 109/299 (36%), Gaps = 68/299 (22%)

Query: 1   MEKYRKVELIGRGKYGSFYKC-EEDVAENAYQTVLLKADIIPDGVPISILTK-----ISP 54
              Y   ++IG G +G  ++    +  E A + VL           + I+       +  
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--NRELQIMRIVKHPNVVD 96

Query: 55  LKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINN--PKTAK-----ILRVL 107
           LK   Y     K+++  +  + EY     + +  +++  +         K     +LR L
Sbjct: 97  LKAFFYSNG-DKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154

Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------------- 140
           +Y HS    H  + P   L++     +K+     A+++                      
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIF 214

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-- 186
                       S GC+ AE++  +PL    S   + + I +++G PS E +  +     
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274

Query: 187 ---FPFIYCYEESEPKDLA-ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
              FP I       P   + +  P   P  +DL+ ++L   P  R+T  +AL H ++ +
Sbjct: 275 EHKFPQI------RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  103 bits (258), Expect = 3e-26
 Identities = 53/301 (17%), Positives = 105/301 (34%), Gaps = 66/301 (21%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-- 58
            + Y+ V  +GRGKY   ++   ++  N  + V++K  I+       I  +I  L+ +  
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAI-NITNN--EKVVVK--ILKPVKKKKIKREIKILENLRG 89

Query: 59  --------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYY 110
                   D   I +    +    +FE+    + +++ +   D        +IL+ L Y 
Sbjct: 90  GPNIITLAD---IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYC 146

Query: 111 HSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------------- 140
           HS   +H  + P+  +I+     +++     A                            
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206

Query: 141 ---------SVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP-- 188
                    S+GC+ A M+ + EP         + + I +++G                 
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266

Query: 189 -FIYCYEESEPKDLAILLPD-----LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            F         K     +       + P  +D L K+LR + + R+T  +A+ H Y+  V
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326

Query: 243 V 243
           V
Sbjct: 327 V 327

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  104 bits (261), Expect = 3e-26
 Identities = 52/305 (17%), Positives = 106/305 (34%), Gaps = 78/305 (25%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTK-----I 52
             Y   ++IG G +G  Y+ +        + V +K  ++ D       + I+ K     I
Sbjct: 54  VSYTDTKVIGNGSFGVVYQAK-LCDSG--ELVAIK-KVLQDKRFKNRELQIMRKLDHCNI 109

Query: 53  SPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK--------IL 104
             L+   Y     K+++  +  + +Y     + +V +++                   + 
Sbjct: 110 VRLRYFFYS-SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRA-KQTLPVIYVKLYMYQLF 166

Query: 105 RVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------- 140
           R L+Y HS    H  + P   L++     +K+     A+ +                   
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 226

Query: 141 ---------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT- 184
                          S GC+ AE+++ +P+    S   + + I +++G P+ E +  +  
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 286

Query: 185 ----TFFPFIYCYEESEPKDLA-ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY- 238
                 FP I      +      +  P   P  + L  ++L   P  R+T  +A  H + 
Sbjct: 287 NYTEFKFPQI------KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

Query: 239 --YRD 241
              RD
Sbjct: 341 DELRD 345

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 97.0 bits (242), Expect = 5e-24
 Identities = 57/251 (22%), Positives = 87/251 (34%), Gaps = 62/251 (24%)

Query: 46  ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK--- 102
           + +   + P        +        VY + EY    +L  V++        P   +   
Sbjct: 71  VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ------GPLLEEHAR 123

Query: 103 -----ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------ 140
                +LR L Y HS   LH  L P    IN  D  +KI     AR++            
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183

Query: 141 --------------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGE 174
                                     + GCIFAEM+  + L   A E  +   I   +  
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243

Query: 175 PSEETLPGVTTFFP-FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
             EE    + +  P +I        K L  LLP +    VD L+++L  +P +R+T  +A
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303

Query: 234 LNHHY---YRD 241
           L+H Y   Y  
Sbjct: 304 LSHPYMSIYSF 314

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 96.2 bits (240), Expect = 2e-23
 Identities = 71/303 (23%), Positives = 103/303 (33%), Gaps = 74/303 (24%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS---ILTKISPLKEM 58
           E+Y+ +  +G G YGS     +         V +K    P    I       ++  LK M
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTG---LRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85

Query: 59  DYPLI----------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK------ 102
            +  +             E    VY +    G  +L  ++K          T        
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKC------QKLTDDHVQFLI 138

Query: 103 --ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------- 140
             ILR L Y HS   +H  L P    +N  D  +KI     AR                 
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTADEMTGYVATRWYRA 197

Query: 141 -----------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
                            SVGCI AE++    L        +   I RL+G P  E L  +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257

Query: 184 TTFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY--- 238
           ++     +I    +    + A +     P  VDLL+KML ++  +RIT   AL H Y   
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

Query: 239 YRD 241
           Y D
Sbjct: 318 YHD 320

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 64/302 (21%), Positives = 104/302 (34%), Gaps = 73/302 (24%)

Query: 2   EKYRKVELIGRGKYGSFYKC-----EEDVA----ENAYQTVLLKADIIPDGVPISILTKI 52
           + Y     +G G YGS          E VA       +Q+ +                ++
Sbjct: 24  KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK---------RAYREL 74

Query: 53  SPLKEMDYPLI----------FRKENDKLVYQIFEYTGLLNLRKVIK-NFLDIINNPKTA 101
             LK M +  +              N    Y +  +    +L+K++   F +        
Sbjct: 75  LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVY 133

Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------- 140
           ++L+ L Y HS   +H  L P    +N  D  +KI     AR                  
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDFGLARHADAEMTGYVVTRWYRAP 192

Query: 141 ----------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                           SVGCI AEM+  + L +      +   I ++ G P  E +  + 
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252

Query: 185 TFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY---Y 239
                 +I    ++  KD   L P   P   DLL+KML ++  +R+T   AL H +   +
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312

Query: 240 RD 241
           RD
Sbjct: 313 RD 314

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 92.5 bits (230), Expect = 4e-22
 Identities = 60/338 (17%), Positives = 112/338 (33%), Gaps = 100/338 (29%)

Query: 1   MEKYRKVELIGRGKYGSFYK-----CEEDVA-----------------------EN---- 28
            +KY   + +G G +G   +       +  A                        N    
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKL 65

Query: 29  ----AYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNL 84
                           P      +  K + +      +I     +K +  I EY     L
Sbjct: 66  VDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TL 124

Query: 85  RKVIKNFLDIINNPKTAK--------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI 136
            KV+K+F+                  + R + + HS    H  + P   L+N  D T+K+
Sbjct: 125 HKVLKSFIRS-GRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKL 183

Query: 137 -----ARLI----------------------------------SVGCIFAEMVIQEPLSE 157
                A+ +                                  S+GC+F E+++ +PL  
Sbjct: 184 CDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243

Query: 158 DASESRERISIFRLMGEPSEETLPGVT-----TFFPFIYCYEESEPKDLAILLPDLEPA- 211
             +   + + I ++MG P++E +  +        FP +      + KD   +LP+  P+ 
Sbjct: 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTL------KAKDWRKILPEGTPSL 297

Query: 212 GVDLLQKMLRVNPKERITVNDALNHHY---YRDVVSVP 246
            +DLL+++LR  P  RI   +A+ H +    R+     
Sbjct: 298 AIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESE 335

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 92.0 bits (229), Expect = 6e-22
 Identities = 60/310 (19%), Positives = 104/310 (33%), Gaps = 77/310 (24%)

Query: 1   MEKYRKVELIGRGKYGSFYK-----CEEDVA-ENAYQTVLLKADIIPDGVPISILTK--- 51
           M++++   + G+G +G+            VA +   Q    +   +       I+     
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL------QIMQDLAV 75

Query: 52  -----ISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK---- 102
                I  L+   Y L  R   D  +  + EY     L +  +N+               
Sbjct: 76  LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRR-QVAPPPILIKV 133

Query: 103 ----ILRVLSYYH--SNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------- 140
               ++R +   H  S    H  + P+  L+N +D T+K+     A+ +           
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193

Query: 141 -----------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE 177
                                  SVGCIFAEM++ EP+    + + +   I R++G PS 
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253

Query: 178 ETLPGVT---TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL 234
           E L  +    T                +           DLL  +L+  P+ER+   +AL
Sbjct: 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313

Query: 235 NHHY---YRD 241
            H Y     D
Sbjct: 314 CHPYFDELHD 323

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 73/321 (22%), Positives = 100/321 (31%), Gaps = 106/321 (33%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISP------- 54
            +Y  +  IG G YG       D        V +K              KISP       
Sbjct: 27  PRYTNLSYIGEGAYGMVCSAY-DNLNK--VRVAIK--------------KISPFEHQTYC 69

Query: 55  ---------LKEMDYPLIFR---------KENDKLVYQIFEYTGLLNLRKVIKNFLDIIN 96
                    L    +  I            E  K VY + +     +L K++K       
Sbjct: 70  QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT------ 122

Query: 97  NPKTAK--------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--- 140
              +          ILR L Y HS   LH  L P   L+N +   +KI     AR+    
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPD 181

Query: 141 -----------------------------------SVGCIFAEMVIQEPLSEDASESRER 165
                                              SVGCI AEM+   P+        + 
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241

Query: 166 ISIFRLMGEPSEETLPGVTTFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVN 223
             I  ++G PS+E L  +       ++             L P+ +   +DLL KML  N
Sbjct: 242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 301

Query: 224 PKERITVNDALNHHY---YRD 241
           P +RI V  AL H Y   Y D
Sbjct: 302 PHKRIEVEQALAHPYLEQYYD 322

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 60/311 (19%), Positives = 100/311 (32%), Gaps = 68/311 (21%)

Query: 2   EKYRKVELIGRGKYG----SFYKCEEDVA-ENAYQTVLLKADIIPDGVPIS---ILTKIS 53
             Y     I  G YG            VA +  + TV     +           +L +I 
Sbjct: 22  SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81

Query: 54  PLKEMDYPLI---------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA--- 101
            L    +P I         F +     +Y + E     +L +VI +   +I+        
Sbjct: 82  LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFM 140

Query: 102 -KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------- 140
             IL  L   H    +H  L+P   L+   +  + I     AR                 
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHRWY 199

Query: 141 -------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
                              S GC+ AEM  ++ L   ++   +   I  ++G P  E + 
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259

Query: 182 GVTTFFPFIY---CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
             ++     Y          +    ++P  +P  +DL+ KML  NP+ RI+   AL H Y
Sbjct: 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319

Query: 239 ---YRDVVSVP 246
                D + + 
Sbjct: 320 FESLFDPLDLT 330

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 89.3 bits (222), Expect = 6e-21
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 50/216 (23%)

Query: 72  VYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRLNPYQALI 127
            Y +  + G  +L K++K+  + +   +      ++L+ L Y H+   +H  L P    +
Sbjct: 105 FYLVMPFMGT-DLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV 161

Query: 128 NLSDYTVKI-----ARLI--------------------------------SVGCIFAEMV 150
           N  D  +KI     AR                                  SVGCI AEM+
Sbjct: 162 N-EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220

Query: 151 IQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--PFIYCYEESEPKDLAILLPDL 208
             + L + +    +   I ++ G P  E +  + +     ++    E E KD A +L + 
Sbjct: 221 TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA 280

Query: 209 EPAGVDLLQKMLRVNPKERITVNDALNHHY---YRD 241
            P  V+LL+KML ++ ++R+T  +AL H Y     D
Sbjct: 281 SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 87.6 bits (217), Expect = 5e-20
 Identities = 69/319 (21%), Positives = 110/319 (34%), Gaps = 95/319 (29%)

Query: 2   EKYRKVELIGRGKYGSFYKC-----EEDVA----ENAYQTV-----------LLKA---- 37
           ++Y+ ++ IG G  G          + +VA       +Q             L+K     
Sbjct: 62  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121

Query: 38  DIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFL-DIIN 96
           +II      S+L   +P K +        E  + VY + E     NL +VI+  L     
Sbjct: 122 NII------SLLNVFTPQKTL--------EEFQDVYLVMELMDA-NLCQVIQMELDHERM 166

Query: 97  NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI----------- 140
           +    ++L  + + HS   +H  L P   ++  SD T+KI     AR             
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTSFMMTPYVV 225

Query: 141 ----------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
                                 SVGCI  EMV  + L        +   +   +G P  E
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285

Query: 179 TLPGVTTFF-PFIYCYEESEPKDLAILLPD------------LEPAGVDLLQKMLRVNPK 225
            +  +      ++    +        L PD                  DLL KML ++P 
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345

Query: 226 ERITVNDALNHHY---YRD 241
           +RI+V+DAL H Y   + D
Sbjct: 346 KRISVDDALQHPYINVWYD 364

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 85.1 bits (211), Expect = 2e-19
 Identities = 62/314 (19%), Positives = 109/314 (34%), Gaps = 73/314 (23%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS---ILTKISPLKE 57
           +++Y+ ++ IG G  G      + + E   + V +K    P            ++  +K 
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILE---RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80

Query: 58  MDYPLI------FRKEND----KLVYQIFEYTGLLNLRKVIKNFL-DIINNPKTAKILRV 106
           +++  I      F  +      + VY + E     NL +VI+  L     +    ++L  
Sbjct: 81  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCG 139

Query: 107 LSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------------- 140
           + + HS   +H  L P   ++  SD T+KI     AR                       
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVT 184
                       SVGCI  EM+    L        +   +   +G P  E +    P V 
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258

Query: 185 TF---------FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN 235
           T+         + F   + +      +           DLL KML ++  +RI+V++AL 
Sbjct: 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318

Query: 236 HHY---YRDVVSVP 246
           H Y   + D     
Sbjct: 319 HPYINVWYDPSEAE 332

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 83.3 bits (206), Expect = 1e-18
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 33/135 (24%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERI-------------------------------SIF 169
           S+GCIFAE++     +      R  +                                IF
Sbjct: 269 SIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIF 328

Query: 170 RLMGEPSEETLPGVTTFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKER 227
            ++G PSEE +  +       +I  + + E  DLA   P      + LL++ML  NP +R
Sbjct: 329 NILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKR 388

Query: 228 ITVNDALNHHYYRDV 242
           IT+N+ L H ++++V
Sbjct: 389 ITINECLAHPFFKEV 403

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 30/156 (19%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK--ADIIPD-GVPISILTKISPLKEM 58
           ++Y    LIG G YG   +   D  E   + V +K    +  D      IL +I+ L  +
Sbjct: 53  DRYEIRHLIGTGSYGHVCEA-YDKLEK--RVVAIKKILRVFEDLIDCKRILREIAILNRL 109

Query: 59  DYPLIFR---------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK------- 102
           ++  + +          E    +Y + E     + +K+ +          T         
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRT-----PVYLTELHIKTLLY 163

Query: 103 -ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA 137
            +L  + Y HS   LH  L P   L+N  D +VK+ 
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVN-QDCSVKVC 198

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 72/332 (21%), Positives = 107/332 (32%), Gaps = 118/332 (35%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISP------- 54
             ++   L+G G YG              + V +K              KI P       
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTG---EIVAIK--------------KIEPFDKPLFA 53

Query: 55  ---------LKEMDYPLIFR---------KENDKLVYQIFEYTGLLNLRKVIKNFLDIIN 96
                    LK   +  I            EN   VY I E     +L +VI        
Sbjct: 54  LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIST------ 106

Query: 97  NPKTAK--------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI--- 140
              +           LR +   H +  +H  L P   LIN S+  +K+     AR+I   
Sbjct: 107 QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDES 165

Query: 141 ------------------------------------------SVGCIFAEMVIQEPLSED 158
                                                     S GCI AE+ ++ P+   
Sbjct: 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225

Query: 159 ASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEES----EPKDLAILLPDLEPAGV 213
                + + IF ++G P S+  L  + +  P    Y +S        L  + P + P G+
Sbjct: 226 RDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPMYPAAPLEKMFPRVNPKGI 283

Query: 214 DLLQKMLRVNPKERITVNDALNHHY---YRDV 242
           DLLQ+ML  +P +RIT  +AL H Y   Y D 
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTYHDP 315

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 78.3 bits (193), Expect = 6e-17
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 34/149 (22%)

Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERI------------------- 166
           ++   +YT  I  + S GCIFAE++       +   +R  +                   
Sbjct: 223 ILLQENYTKSI-DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVH 281

Query: 167 ---------SIFRLMGEPSEETLPGVTTFF--PFIYCYEESEPKDLAILLPDLEPAGVDL 215
                     IF ++G P+E+ L  +       +I  +   +P +L    P +   G++L
Sbjct: 282 EKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341

Query: 216 LQKMLRVNPKERITVNDALNHHY---YRD 241
           L+ ML+ NP +RIT++ AL+H Y    R 
Sbjct: 342 LESMLKFNPNKRITIDQALDHPYLKDVRK 370

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 68.6 bits (168), Expect = 1e-13
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----- 180
           L+  + YT  I  + S+GCI  E++  +P+   +S   +   I  ++  PS E +     
Sbjct: 202 LLGSTKYTKGI-DMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQS 260

Query: 181 -------------PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKER 227
                          +          +            D     +DLL K+L+ NP +R
Sbjct: 261 PFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320

Query: 228 ITVNDALNHHY---YRDVVSVP 246
           I+ NDAL H +   + +    P
Sbjct: 321 ISANDALKHPFVSIFHNPNEEP 342

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 58.5 bits (141), Expect = 3e-10
 Identities = 33/318 (10%), Positives = 71/318 (22%), Gaps = 99/318 (31%)

Query: 3   KYRKVELIGRGKYGSFYKCE-----EDVA--------------------ENAYQTVLLKA 37
           K + VE +  G     +        ED A                           LL  
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 38  DIIPDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLL-----NLRKVIKNFL 92
                     +L     +     P   +    +  Y +  Y  L+     +L  +     
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 93  DIINNPK----------TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----A 137
            +               TA+++R+ +   S   +HG   P    I   D  + +      
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM-PDGRLMLGDVSAL 241

Query: 138 RLI---------------------------------SVGCIFAEMVIQEPLSEDASESRE 164
             +                                  +G     +          +   +
Sbjct: 242 WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIK 301

Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNP 224
                  +  P  ++L        F  C    +                 L+ + L  + 
Sbjct: 302 GSWKRPSLRVPGTDSLA-------FGSCTPLPDF-------------VKTLIGRFLNFDR 341

Query: 225 KERITVNDALNHHYYRDV 242
           + R+   +A+    +  +
Sbjct: 342 RRRLLPLEAMETPEFLQL 359

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 51/289 (17%), Positives = 95/289 (32%), Gaps = 75/289 (25%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKE 57
              Y  ++ IG G     ++   +      Q   +K    +   +    S   +I+ L +
Sbjct: 27  GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 82

Query: 58  MDYP------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRV 106
           +         L   +  D+ +Y + E   + +L   +K    I  +P   K     +L  
Sbjct: 83  LQQHSDKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSI--DPWERKSYWKNMLEA 139

Query: 107 LSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFA-------------- 147
           +   H +  +H  L P  A   + D  +K+     A  +                     
Sbjct: 140 VHTIHQHGIVHSDLKP--ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197

Query: 148 EMVIQEPLSEDASESRERIS----------IFRLM--GEPSEETLPGVTTFFPFIYCYEE 195
           E +     S +  +S+ +IS          I   M  G+             PF      
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT------------PF-QQIIN 244

Query: 196 SEPKDLAILLPD--------LEPAGVDLLQKMLRVNPKERITVNDALNH 236
              K  AI+ P+         E    D+L+  L+ +PK+RI++ + L H
Sbjct: 245 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 19/115 (16%)

Query: 141 SVGCIFAEMVIQEPL-----SEDASESRERIS-IFRLMGEPSEETL---PGVTTFFP--- 188
           S  C+  E++  + L         ++  + I+ I  L+GE     L       TFF    
Sbjct: 220 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279

Query: 189 FIYCYEESEPKDLAILLPDLEPAG-------VDLLQKMLRVNPKERITVNDALNH 236
            +    + +   L  +L +             D L  ML+++P++R      +NH
Sbjct: 280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 49/288 (17%), Positives = 94/288 (32%), Gaps = 75/288 (26%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEM 58
             Y  ++ IG G     ++   +      Q   +K    +   +    S   +I+ L ++
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 64

Query: 59  DYP------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVL 107
                    L   +  D+ +Y + E   + +L   +K    I  +P   K     +L  +
Sbjct: 65  QQHSDKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSI--DPWERKSYWKNMLEAV 121

Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFA--------------E 148
              H +  +H  L P  A   + D  +K+     A  +                     E
Sbjct: 122 HTIHQHGIVHSDLKP--ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179

Query: 149 MVIQEPLSEDASESRERIS------------IFRLMGEPSEETLPGVTTFFPFIYCYEES 196
            +     S +  +S+ +IS             +   G+             PF       
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT------------PF-QQIINQ 226

Query: 197 EPKDLAILLPD--------LEPAGVDLLQKMLRVNPKERITVNDALNH 236
             K  AI+ P+         E    D+L+  L+ +PK+RI++ + L H
Sbjct: 227 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 30/136 (22%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL---PGVTTFF---PFIYCYE 194
           S+GCI AE++   PL     E  +   +  L+G PS++ L        F     +     
Sbjct: 284 SLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCT 343

Query: 195 ESEPKDLAILLP----------------DLEPAG--------VDLLQKMLRVNPKERITV 230
            +   D +++L                 +   A         +D L++ L  +P  R+T 
Sbjct: 344 VTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP 403

Query: 231 NDALNHHYYRDVVSVP 246
             AL H + R  +  P
Sbjct: 404 GQALRHPWLRRRLPKP 419

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 50/287 (17%), Positives = 93/287 (32%), Gaps = 71/287 (24%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKE 57
              Y  ++ IG G     ++   +      Q   +K    +   +    S   +I+ L +
Sbjct: 55  GRIYSILKQIGSGGSSKVFQVLNE----KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110

Query: 58  MDYP------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRV 106
           +         L   +  D+ +Y + E   + +L   +K    I  +P   K     +L  
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSI--DPWERKSYWKNMLEA 167

Query: 107 LSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFA-------------- 147
           +   H +  +H  L P  A   + D  +K+     A  +                     
Sbjct: 168 VHTIHQHGIVHSDLKP--ANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225

Query: 148 EMVIQEPLSEDASESRERIS----------IFRLMGEPSEETLPGVTTFFPFIYCYEESE 197
           E +     S +  +S+ +IS          I   M               PF        
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM----------TYGKTPF-QQIINQI 274

Query: 198 PKDLAILLPD--------LEPAGVDLLQKMLRVNPKERITVNDALNH 236
            K  AI+ P+         E    D+L+  L+ +PK+RI++ + L H
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 15/111 (13%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT---FFPFIYCYEESE 197
           S+GCI  E  +   +            + R++G   +  +        F      ++E  
Sbjct: 219 SIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHS 278

Query: 198 P---------KDLAILLPDLEP---AGVDLLQKMLRVNPKERITVNDALNH 236
                     K L   +   +       DL+QKML  +P +RIT+ +AL H
Sbjct: 279 SAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 15/117 (12%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT---FFPFIYCYEESE 197
           S+GCI  E      L +        + + +++G      +        F+     ++E+ 
Sbjct: 224 SIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENS 283

Query: 198 P---------KDLAILLPDLEP---AGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                     K L   +           DL+++ML  +P +RIT+ +AL H ++  +
Sbjct: 284 SDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 31/131 (23%), Positives = 43/131 (32%), Gaps = 35/131 (26%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL---PGVTTFF-------PFI 190
           S+GCI  EM   EPL   A+E  +   I  ++G P    L   P    FF         +
Sbjct: 243 SLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNL 302

Query: 191 YCYEESE---------------------PKDLAILLPDLEPAG----VDLLQKMLRVNPK 225
              ++ +                     P            A      DL+ +ML  +PK
Sbjct: 303 KKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPK 362

Query: 226 ERITVNDALNH 236
            RI    AL H
Sbjct: 363 TRIQPYYALQH 373

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 27/118 (22%)

Query: 141 SVGCIFAEMVIQEPLSEDASESRERIS-IFRLMGEPSEE--------------------- 178
           S GC+ AE+     L        E ++ +  ++    +                      
Sbjct: 244 SFGCVLAELYTGSLLFRTHEH-MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKL 302

Query: 179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
             P   +    I   ++  P    I          D L  +L+++P  R +  + L H
Sbjct: 303 AWPENASSINSIKHVKKCLPLYKIIKHELF----CDFLYSILQIDPTLRPSPAELLKH 356

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 49/304 (16%), Positives = 87/304 (28%), Gaps = 104/304 (34%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTK--------- 51
            E Y  +  IG G YG   K     ++   + ++ K       +    +T+         
Sbjct: 5   AEDYEVLYTIGTGSYGRCQKI-RRKSDG--KILVWKE------LDYGSMTEAEKQMLVSE 55

Query: 52  ISPLKEMDYPLI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
           ++ L+E+ +P I           +  +Y + EY    +L  VI              +LR
Sbjct: 56  VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR 115

Query: 106 V-------LSYYHSNRC-----LHGRLNPYQALINLSDYTVK-----IARLI-------- 140
           V       L   H         LH  L P    ++     VK     +AR++        
Sbjct: 116 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD-GKQNVKLGDFGLARILNHDTSFAK 174

Query: 141 --------------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGE 174
                                     S+GC+  E+    P     S+      I      
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE---- 230

Query: 175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL 234
                  G     P+ Y        +L            +++ +ML +    R +V + L
Sbjct: 231 -------GKFRRIPYRY------SDEL-----------NEIITRMLNLKDYHRPSVEEIL 266

Query: 235 NHHY 238
            +  
Sbjct: 267 ENPL 270

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 38/303 (12%), Positives = 84/303 (27%), Gaps = 69/303 (22%)

Query: 2   EKYRKV---ELIGRGKYGSFYKCE-----EDVA-------------------ENAYQTVL 34
           E+ R +    ++G+    ++ +       E                      E   +  L
Sbjct: 75  ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRL 134

Query: 35  LKADIIPDGVPI--SILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLL-----NLRKV 87
           L+         +    +     +K+     + R   D+    +     L      NL+  
Sbjct: 135 LRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTF 194

Query: 88  IKNFLDIINNPK----------TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA 137
            +  L   +  K          T +++R+L+  H    +H  L P   +++     V + 
Sbjct: 195 GEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-QRGGVFLT 253

Query: 138 RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP---------GVTTF-- 186
                  +  +               E  +   L       TL          G+  +  
Sbjct: 254 GF---EHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310

Query: 187 ----FPFIYCYEESEPKDLAILLPDLE--PAGV-DLLQKMLRVNPKERITVNDALNHHYY 239
                P     +++       +    +  P  V  LL+  LR   ++R+    A+    Y
Sbjct: 311 WCADLPN---TDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 367

Query: 240 RDV 242
             +
Sbjct: 368 EQL 370

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 53/287 (18%), Positives = 97/287 (33%), Gaps = 73/287 (25%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAY------QTVLLKADIIPDGVPISILTKISPL 55
           ++Y   + +G G  G      E             +              +++ T+I  L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194

Query: 56  KEMDYPLIFR-KE--NDKLVYQIFEY-TG--LLNLRKVIKNFLDIINNPKTAK-----IL 104
           K++++P I + K   + +  Y + E   G  L + + V    L       T K     +L
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFD-KVVGNKRL----KEATCKLYFYQML 249

Query: 105 RVLSYYHSNRCLHGRLNPYQALI--NLSDYTVKI-----ARLISVGCIFAEM-------- 149
             + Y H N  +H  L P   L+     D  +KI     ++++    +   +        
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309

Query: 150 --VIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF------PFIYCYEESEPKDL 201
             V+    +   + + +  S+             GV  F       PF    E      L
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSL-------------GVILFICLSGYPPF---SEHRTQVSL 353

Query: 202 --AILL----------PDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
              I             ++    +DL++K+L V+PK R T  +AL H
Sbjct: 354 KDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 50/290 (17%), Positives = 94/290 (32%), Gaps = 86/290 (29%)

Query: 3   KYRKVELIGRGKYGSFYKCE----EDVAENAYQTV--LLKADIIPDGVPISILTK-ISPL 55
            +   +++G G  G+          DVA      V  +L           S   + +  L
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVA------VKRILPECF-------SFADREVQLL 71

Query: 56  KEMDY-PLIFR----KENDKLVYQIFEY-TGLLNLRKVIKNFLDIINNPKTA--KILRVL 107
           +E D  P + R    +++ +  Y   E     L      K+F  +   P T   +    L
Sbjct: 72  RESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGL 131

Query: 108 SYYHSNRCLHGRLNPYQALI----NLSDYTVKIA------RLISVGCIFAEM-------- 149
           ++ HS   +H  L P+  LI            I+      +L      F+          
Sbjct: 132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191

Query: 150 -----VIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF-------PFIYCYEESE 197
                ++ E   E+ + +   + IF            G   ++       PF     +S 
Sbjct: 192 WIAPEMLSEDCKENPTYT---VDIFSA----------GCVFYYVISEGSHPF----GKSL 234

Query: 198 PKDLAILL-----------PDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
            +   ILL              +    +L++KM+ ++P++R +    L H
Sbjct: 235 QRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 35/300 (11%), Positives = 85/300 (28%), Gaps = 67/300 (22%)

Query: 3   KYRKVELIGRGKYGSFYKC------------------------EEDVAENAYQTVLLKAD 38
              +  ++G+    ++ +                          + + E   +  LL+  
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 39  IIPDGVPI--SILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLL-----NLRKVIKNF 91
                  +    +     +K+     + R   D+    +     L      NL+   +  
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 92  LDIINNPK----------TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA---R 138
           L   +  K          T +++R+L+  H    +H  L P   +++     V +     
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-QRGGVFLTGFEH 252

Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP-------GVTTF----- 186
           L+  G   A +V       +  E   R +      +              G+  +     
Sbjct: 253 LVRDG---ARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309

Query: 187 -FPFIYCYEESEPKDLAILL---PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
             P     +++       +     ++      LL+  LR   ++R+    A+    Y  +
Sbjct: 310 DLPI---TKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 20/133 (15%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK----ADIIPDGVPISILTKISPLK 56
           +  +R  + IGRG++   Y+    + +     V LK     D++        + +I  LK
Sbjct: 31  LANFRIEKKIGRGQFSEVYRA-ACLLDG--VPVALKKVQIFDLMDAKARADCIKEIDLLK 87

Query: 57  EMDYPLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRV----- 106
           ++++P + +      E+++L   + E     +L ++IK+F           + +      
Sbjct: 88  QLNHPNVIKYYASFIEDNEL-NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146

Query: 107 --LSYYHSNRCLH 117
             L + HS R +H
Sbjct: 147 SALEHMHSRRVMH 159

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 10/23 (43%), Positives = 11/23 (47%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DLL  +L  N  ER     AL H
Sbjct: 309 DLLSNLLNRNVDERFDAMRALQH 331

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 14/23 (60%), Positives = 20/23 (86%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+++ML ++P ERITV +ALNH
Sbjct: 265 DLVRRMLMLDPAERITVYEALNH 287

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 15/63 (23%)

Query: 186 FFPFIYCYEESEPKDL--AILL----------PDLEPAGVDLLQKMLRVNPKERITVNDA 233
           + PF    E      L   I             ++    +DL++K+L V+PK R T  +A
Sbjct: 216 YPPF---SEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272

Query: 234 LNH 236
           L H
Sbjct: 273 LRH 275

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            L+  ML VNPK+RIT + AL  
Sbjct: 263 SLIDSMLTVNPKKRITADQALKV 285

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 11/97 (11%), Positives = 29/97 (29%), Gaps = 2/97 (2%)

Query: 141 SVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPK 199
           S+G  F        P        R +  +++++       + GV         +    P 
Sbjct: 208 SIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV 267

Query: 200 DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
             ++    L+     +L  +L  + ++    +     
Sbjct: 268 SCSLS-RGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            L+  ML VNPK+RIT + AL  
Sbjct: 240 SLIDSMLTVNPKKRITADQALKV 262

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+ KML +NP +RIT  +AL H
Sbjct: 246 DLINKMLTINPSKRITAAEALKH 268

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 187 FPF--IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           +P    +       K        L    +D L+  LR NP ERIT  DAL H
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 206 PDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           PD+     DL+ +ML  NP+ RI V +   H
Sbjct: 263 PDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 7/23 (30%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            L++ +L+  P +R+T+ + +NH
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNH 257

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 51/296 (17%), Positives = 89/296 (30%), Gaps = 93/296 (31%)

Query: 4   YRKVELIGRGKYGSFYKCE-----EDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM 58
            +    IGRG + + YK        +VA    Q   L               +   LK +
Sbjct: 28  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR-----FKEEAEMLKGL 82

Query: 59  DYPLIFR--------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILR 105
            +P I R         +  K +  + E      L+  +K F  +    K  +     IL+
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVM--KIKVLRSWCRQILK 140

Query: 106 VLSYYHSNRC--LHGRLNPYQALINLSDYTVKIARL------------------------ 139
            L + H+     +H  L      I     +VKI  L                        
Sbjct: 141 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPE 200

Query: 140 -----------I-SVGCIFAEMVIQE-PLSEDASESRERISIFRLMGEPSEETLPGVTTF 186
                      + + G    EM   E P SE  + +     I+R +   +    P     
Sbjct: 201 MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYRRV---TSGVKP----- 248

Query: 187 FPFIYCYEESEPKDLAILLPDLE-PAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
                                +  P   ++++  +R N  ER ++ D LNH ++++
Sbjct: 249 ----------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 18/127 (14%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-DGVPISILTKISPLKEMDY 60
           E +  +E +G G YGS YK          Q V +K   +P +     I+ +IS +++ D 
Sbjct: 29  EVFDVLEKLGEGSYGSVYKA-IHKETG--QIVAIK--QVPVESDLQEIIKEISIMQQCDS 83

Query: 61  PLI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYY 110
           P +      + K  D  +  + EY G  ++  +I+     +   + A IL+     L Y 
Sbjct: 84  PHVVKYYGSYFKNTDLWI--VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141

Query: 111 HSNRCLH 117
           H  R +H
Sbjct: 142 HFMRKIH 148

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+ KML V+P +R+T    L H
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRH 278

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 12/23 (52%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL++KML   P  RI+  DAL+H
Sbjct: 260 DLIRKMLTYVPSMRISARDALDH 282

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+++ML+ + + RI+   AL H
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEH 292

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+Q +L V+P +R+ ++    +
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYN 271

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+ + L V P++R T  +AL H
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAH 284

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL++KML  +P  RIT    L H
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEH 277

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL++KML  +P  RIT    L H
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEH 277

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           +L++ ML  +  +R T  +ALN 
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNS 302

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 206 PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
             L     DL+ +M+  +P +R T    L H  +  
Sbjct: 266 RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+ ++L+V+P+ R+T   AL H
Sbjct: 338 DLISRLLQVDPEARLTAEQALQH 360

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DLL++ML  +P+ R +    L+H
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHH 279

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 18/23 (78%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL++K++ ++PK+R+T   AL H
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQH 306

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            L++++L  +PK+RIT   AL H
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEH 262

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D +  +L  +P ER T   AL+H
Sbjct: 240 DFICHLLEKDPNERYTCEKALSH 262

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D +Q +L  NP++R T    L+H
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSH 288

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           DL+ K+L  + K+R++    L H
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQH 296

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 39/141 (27%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTK--------- 51
           MEKY +++ IG G +G      +   +   +  ++K       + IS ++          
Sbjct: 23  MEKYVRLQKIGEGSFGKAILV-KSTEDG--RQYVIKE------INISRMSSKEREESRRE 73

Query: 52  ISPLKEMDYPLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNF----------LDIIN 96
           ++ L  M +P I +     +EN  L Y + +Y    +L K I             LD   
Sbjct: 74  VAVLANMKHPNIVQYRESFEENGSL-YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF- 131

Query: 97  NPKTAKILRVLSYYHSNRCLH 117
                +I   L + H  + LH
Sbjct: 132 ----VQICLALKHVHDRKILH 148

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 7/23 (30%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            L++ +L+  P +R+T+ + +NH
Sbjct: 300 MLIRNLLKTEPTQRMTITEFMNH 322

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 9/23 (39%), Positives = 18/23 (78%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D ++++L  +PK+R+T+ D+L H
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQH 272

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            L++ +L+ +P ER+T+   +NH
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNH 288

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D ++K+L    ++R+T+ +AL H
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRH 273

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D ++++L  +PK R+T+  +L H
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEH 266

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D ++K+L    ++R+T+ +AL H
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRH 273

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.5 bits (92), Expect = 6e-04
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 19/115 (16%)

Query: 141 SVGCIFAEMVIQEPL-----SEDASESRERIS-IFRLMGEPSEETLPGVTT---FF---- 187
           S  C+  E+   + L      E+ +   + I+ I  L+G+   + +        FF    
Sbjct: 278 STACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKG 337

Query: 188 PFIYCYEESEPKDLAILLPDLEPAG------VDLLQKMLRVNPKERITVNDALNH 236
              +  +        +L+   E +        D L  ML + P++R T  + L H
Sbjct: 338 DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 38.9 bits (91), Expect = 9e-04
 Identities = 10/23 (43%), Positives = 18/23 (78%)

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
           D ++ +L+  P++R+TV+DAL H
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEH 305

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	246
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.87
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.84
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.83
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.78
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.28
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.18
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.85
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.43
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.28
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.22
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.12
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.09
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.02
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.66
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.61
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.59
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.45
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.43
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.35
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.04
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.91
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.75
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.75
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.53
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.26
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.79
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.73
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.08
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	88.07
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	83.01
3mes_A	424	Choline kinase; malaria, structural genomics, stru	80.51

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.9e-55  Score=355.35  Aligned_cols=209  Identities=19%  Similarity=0.270  Sum_probs=169.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|++++.||+|+||+||+|++.. +  ++.||+|+...   .......+.+|+.+++.++||||+++    .+.+.+|
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTE-D--GRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY   99 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETT-T--CCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECC-C--CCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEE
Confidence            6899999999999999999999987 6  88999998322   22234678999999999999999998    6678999


Q ss_pred             EEEeccCcccHHHHHhhhcccc-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDII-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      +|||||+||+|.+++.......     ...++.||+.||.|||++||+||||||+|||++.++ ..|++|          
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNST  178 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC-CEEECSTTEESCCCHH
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC-CEEEcccccceeecCC
Confidence            9999999999999996543222     333455999999999999999999999999999777 556666          


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+||++|+|++|+.||.+.+..+.+..+...  ..+             
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~-------------  243 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG--SFP-------------  243 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCC-------------
T ss_pred             cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC--CCC-------------
Confidence                                         999999999999999999988877776666652  110             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                   ..+..+|+++++||.+||+.||++|||++|+|+||||++
T Consensus       244 -------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          244 -------------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             -------------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence                         012468999999999999999999999999999999975

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=5.3e-55  Score=352.27  Aligned_cols=212  Identities=17%  Similarity=0.209  Sum_probs=177.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +.|+++++||+|+||+||+|+++. +  ++.||+|+ ........+.+.+|+.+|+.++||||+++    .+.+.+|+||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~-t--g~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRS-S--GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECC-C--CCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            469999999999999999999988 6  88999998 33344556788999999999999999998    5678999999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      |||+||+|.+++.+..  +.....++.||+.||.|||++||+||||||+|||++.++ ..|++|                
T Consensus       151 Ey~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-~vKl~DFGla~~~~~~~~~~~~  229 (346)
T 4fih_A          151 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKS  229 (346)
T ss_dssp             CCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-CEEECCCTTCEECCSSSCCBCC
T ss_pred             eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC-CEEEecCcCceecCCCCCcccc
Confidence            9999999999997532  334444555999999999999999999999999999777 556666                


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                             +||+||++|||++|++||.+.+....+..+..... +..                  
T Consensus       230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~------------------  290 (346)
T 4fih_A          230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRL------------------  290 (346)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCC------------------
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCC------------------
Confidence                                   99999999999999999998887777666655211 000                  


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                             ..+..+|+++++||.+||+.||++|||++|+|+||||++..
T Consensus       291 -------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          291 -------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             -------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             -------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence                   01146799999999999999999999999999999998753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.1e-55  Score=360.56  Aligned_cols=237  Identities=26%  Similarity=0.361  Sum_probs=195.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----------cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----------EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----------~~   68 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+....   ......+.+|+.+|+.++||||+++          .+
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~-t--~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRL-T--GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred             CCeEEEEEEecccCeEEEEEEECC-C--CCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence            479999999999999999999987 6  889999983222   2234567899999999999999998          13


Q ss_pred             CceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------  136 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------  136 (246)
                      .+.+|+||||++ |+|.+++.+..   +..+..++.||+.||.|||++||+||||||+|||++.++ ..++         
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~-~~Ki~DFGla~~~  208 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC-ELKIGDFGMARGL  208 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC-CEEECCCTTCBCC
T ss_pred             CCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC-CEEEeecceeeec
Confidence            468999999998 78999996532   333444555999999999999999999999999999776 3333         


Q ss_pred             -----------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          137 -----------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       137 -----------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                         +|+||+||++++|++|++||.+.+..+++..+....|.|....+.
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~  288 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ  288 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence                                               349999999999999999999999999999999999999888776


Q ss_pred             CCCCcc--ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          182 GVTTFF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       182 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ......  .+....+......+....+.++++++|||.+||..||.+||||.|+|+||||++..
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            654432  23344555566667777889999999999999999999999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.5e-55  Score=348.47  Aligned_cols=209  Identities=22%  Similarity=0.358  Sum_probs=177.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+.    .........+.+|+++++.++||||+++    .+.+.+|
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~-~--~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y  108 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELA-T--SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY  108 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECC-C--CCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            579999999999999999999988 6  889999982    1234556789999999999999999998    6788999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      +||||++||+|.+++.+..   +.....++.||+.||.|||++||+||||||+|||++.++ ..+++|            
T Consensus       109 ivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g-~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          109 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-CEEECCCTTCEECCTTTT
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC-CEEEEEcCCceecCCCCC
Confidence            9999999999999997642   334444555999999999999999999999999999776 455555            


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+||++|+|++|++||.+.+....+..+...  .+.             
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~--~~~-------------  252 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--EYD-------------  252 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCC-------------
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCC-------------
Confidence                                         999999999999999999988877777666652  110             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHH------HhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVND------ALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e------~l~h~~~~~~~  243 (246)
                                    .+..+|+++++||.+||+.||++|||++|      +++||||++++
T Consensus       253 --------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          253 --------------FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             --------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             --------------CCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence                          12467899999999999999999999998      58999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.8e-54  Score=353.81  Aligned_cols=211  Identities=17%  Similarity=0.214  Sum_probs=177.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|+++++||+|+||+||+|++.. +  ++.||+|+ ........+.+.+|+.+|+.++||||+++    .+.+.+|+||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~-t--g~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRS-S--GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECC-C--CCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence            469999999999999999999988 6  88999998 33344556788999999999999999998    5678999999


Q ss_pred             eccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           77 EYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      |||+||+|.+++...  .+..+..++.||+.||.|||++||+||||||+|||++.+| ..|++|                
T Consensus       228 Ey~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g-~vKl~DFGla~~~~~~~~~~~~  306 (423)
T 4fie_A          228 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKS  306 (423)
T ss_dssp             ECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC-CEEECCCTTCEECCSSCCCBCC
T ss_pred             eCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-CEEEecCccceECCCCCccccc
Confidence            999999999999653  2334444555999999999999999999999999999777 556666                


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                             ||||||++|||++|++||.+.+....+..+..... +..                  
T Consensus       307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~------------------  367 (423)
T 4fie_A          307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRL------------------  367 (423)
T ss_dssp             CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCC------------------
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCC------------------
Confidence                                   99999999999999999998887777666655211 100                  


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                             ..+..+|+++++||.+||..||++|||+.|+|+||||++.
T Consensus       368 -------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          368 -------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             -------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             -------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence                   0124689999999999999999999999999999999875

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.4e-54  Score=342.67  Aligned_cols=212  Identities=17%  Similarity=0.261  Sum_probs=170.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++++.||+|+||+||+|++..+...++.||+|+..   ........+.+|+.+++.++||||+++    .+.+.+|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999885423337789999821   122234578899999999999999998    66789999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ||||++||||.+++.+..   +..+..++.||+.||.|||++||+||||||+|||++.++ ..+++|             
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-~vKl~DFGla~~~~~~~~~  182 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKK  182 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS-CEEEESSEEEEC-----CC
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC-CEEecccccceeccCCCcc
Confidence            999999999999997642   334444555999999999999999999999999999777 556666             


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                +||+||++|+|++|+.||.+.+..+....+...  .+.                
T Consensus       183 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~----------------  244 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLG----------------  244 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC----------------
T ss_pred             ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC--CCC----------------
Confidence                                      999999999999999999988877777666652  110                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                 .++.+|+++++|+++||+.||++|||     ++|+++||||++++
T Consensus       245 -----------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          245 -----------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             -----------CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence                       12468999999999999999999998     47999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.5e-54  Score=337.58  Aligned_cols=207  Identities=23%  Similarity=0.306  Sum_probs=166.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||+||+|++.. +  ++.||+|+..    ........+.+|+.+++.++||||+++    .+.+..
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTT-T--GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTT-T--CCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECC-C--CCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence            4789999999999999999999987 6  8899999821    223345678999999999999999998    677899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      |+||||++ |+|.+++.+..   +.....++.||+.||+|||++||+||||||+|||++.++ ..++             
T Consensus        89 ~ivmEy~~-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~-~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           89 IMVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL-NVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EEEEECCC-EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC-CEEECCSSCC-------
T ss_pred             EEEEeCCC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC-CEEEeecCCCeecCCCC
Confidence            99999996 89999987542   333344455999999999999999999999999999776 3344             


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+||++++|++|+.||.+.+.......+...  .+.              
T Consensus       167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~--------------  230 (275)
T 3hyh_A          167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYT--------------  230 (275)
T ss_dssp             --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCC--------------
T ss_pred             ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC--------------
Confidence                                      44999999999999999999987766655555441  110              


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                   .++.+|+++++|+.+||+.||++|||++|+++||||+.
T Consensus       231 -------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          231 -------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             -------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             -------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                         12467899999999999999999999999999999974

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.1e-53  Score=348.99  Aligned_cols=241  Identities=17%  Similarity=0.215  Sum_probs=182.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.++||+|+||+||+|+++.....++.||+|... ......++.+|+++++.+ +||||+++    .+.+++|+||
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~-~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLI-PTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEEC-TTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEc-cccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            57999999999999999999876322237789999732 234556789999999998 69999998    6678999999


Q ss_pred             eccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------------  136 (246)
                      ||++|++|.+++...++.....++.||+.||+|||++||+||||||+|||++.+....++                    
T Consensus       100 E~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~  179 (361)
T 4f9c_A          100 PYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFV  179 (361)
T ss_dssp             ECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC
T ss_pred             eCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccc
Confidence            999999999999887777777788899999999999999999999999999865212222                    


Q ss_pred             ------------------------------------------------EEeehhhHHHHHHhhCCCCCC-CCcchHHHHH
Q 036362          137 ------------------------------------------------ARLISVGCIFAEMVIQEPLSE-DASESRERIS  167 (246)
Q Consensus       137 ------------------------------------------------~Di~slG~i~~~l~~g~~~~~-~~~~~~~~~~  167 (246)
                                                                      +|+||+||++++|++|+.||. +.++.+++..
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~  259 (361)
T 4f9c_A          180 QSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQ  259 (361)
T ss_dssp             --------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence                                                            349999999999999999985 5566778888


Q ss_pred             HHHhhCCCCcCcCCCCCC--------cc--c----------cccccCC-----CCcchhhhhCCCCChHHHHHHHHhhhc
Q 036362          168 IFRLMGEPSEETLPGVTT--------FF--P----------FIYCYEE-----SEPKDLAILLPDLEPAGVDLLQKMLRV  222 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~--------~~--~----------~~~~~~~-----~~~~~~~~~~~~~~~~~~~ll~~~l~~  222 (246)
                      +....|.+....+.....        .+  .          .....+.     .......+.+..+|++++|||++||+.
T Consensus       260 I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~  339 (361)
T 4f9c_A          260 IMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDL  339 (361)
T ss_dssp             HHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCS
T ss_pred             HHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcC
Confidence            888877643221110000        00  0          0000000     000111223467899999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCcCCC
Q 036362          223 NPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       223 dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ||++||||+|+|+||||++++
T Consensus       340 dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          340 NPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             CTTTSCCHHHHHTSGGGTTC-
T ss_pred             ChhHCcCHHHHhcCcccCCCC
Confidence            999999999999999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.4e-52  Score=337.21  Aligned_cols=209  Identities=16%  Similarity=0.179  Sum_probs=172.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.++||+|+||+||+|+++. +  ++.||+|+...    .....+|+.+++.++||||+++    .+.+.+|+|||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~-~--g~~vAiK~i~~----~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQ-T--GFQCAVKKVRL----EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEET----TTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hheEeCcEeccCCCeEEEEEEECC-C--CCEEEEEEECH----HHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            468899999999999999999988 6  88999998322    1234689999999999999998    56788999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      |++||+|.+++.+..   +.....++.||+.||.|||++||+||||||+|||++.++...|++|                
T Consensus       131 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~  210 (336)
T 4g3f_A          131 LLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL  210 (336)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred             ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence            999999999997642   3333445559999999999999999999999999998775567766                


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  +||+||++|+|++|++||.+.+.......+...  .                
T Consensus       211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~----------------  272 (336)
T 4g3f_A          211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE--P----------------  272 (336)
T ss_dssp             ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS--C----------------
T ss_pred             ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC--C----------------
Confidence                                        999999999999999999877665555555441  1                


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHH-------------hcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA-------------LNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~-------------l~h~~~~~~~  243 (246)
                              ......++.+++++.+||.+||+.||.+|||+.|+             |+|||+++..
T Consensus       273 --------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          273 --------PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             --------CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             --------CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence                    11122346789999999999999999999999997             6899998863

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.3e-52  Score=331.91  Aligned_cols=210  Identities=20%  Similarity=0.246  Sum_probs=164.9

Q ss_pred             Cc-cceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe--------cCCc
Q 036362            3 KY-RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK--------ENDK   70 (246)
Q Consensus         3 ~y-~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~   70 (246)
                      +| ++.++||+|+||+||+|.+.. +  +..||+|...   ........+.+|+.+++.++||||+++        ...+
T Consensus        26 r~~~~~~~iG~G~fg~Vy~a~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~  102 (290)
T 3fpq_A           26 RFLKFDIEIGRGSFKTVYKGLDTE-T--TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEE
T ss_pred             ceEEeeeEEecCcCcEEEEEEECC-C--CeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCc
Confidence            44 677889999999999999987 6  7788988722   222234578999999999999999998        1246


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCCeeeEEE-------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDYTVKIAR-------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~~~~~~D-------  138 (246)
                      .+|+||||++||+|.+++.+..   +.....++.||+.||.|||++|  |+||||||+|||++......|++|       
T Consensus       103 ~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            7899999999999999997643   2233334559999999999998  999999999999985433566666       


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +|||||++++|++|+.||.+............. +.++.            
T Consensus       183 ~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-~~~~~------------  249 (290)
T 3fpq_A          183 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKPA------------  249 (290)
T ss_dssp             CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCG------------
T ss_pred             CCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-CCCCC------------
Confidence                                         999999999999999999876554443332221 11000            


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                   ......++++++|+.+||+.||++|||++|+|+||||++
T Consensus       250 -------------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          250 -------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -------------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                         012457889999999999999999999999999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.2e-50  Score=321.62  Aligned_cols=208  Identities=18%  Similarity=0.278  Sum_probs=156.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----c--------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----E--------   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~--------   67 (246)
                      ++|++++.||+|+||+||+|+++. +  ++.||+|+..  ......+.+.+|+.+++.++||||+++    .        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~   81 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKV-D--DCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL   81 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETT-T--CCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred             hhCEEeeEEecCCCeEEEEEEECC-C--CCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence            579999999999999999999987 6  7889999832  222234578899999999999999998    1        


Q ss_pred             ----CCceEEEEEeccCcccHHHHHhhhccc-c-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE
Q 036362           68 ----NDKLVYQIFEYTGLLNLRKVIKNFLDI-I-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA  137 (246)
Q Consensus        68 ----~~~~~~lv~e~~~~~~L~~~~~~~~~~-~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~  137 (246)
                          ...++|+|||||+||+|.+++...... .     ...++.||+.||+|||++||+||||||+|||++.++ ..|++
T Consensus        82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~-~vKl~  160 (299)
T 4g31_A           82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVG  160 (299)
T ss_dssp             -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEEC
T ss_pred             cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCC-cEEEc
Confidence                123579999999999999999764311 1     223455999999999999999999999999999776 33333


Q ss_pred             ---------------------------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHH
Q 036362          138 ---------------------------------------------------RLISVGCIFAEMVIQEPLSEDASESRERI  166 (246)
Q Consensus       138 ---------------------------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~  166 (246)
                                                                         |+||+||+++||++   ||....+  ...
T Consensus       161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~--~~~  235 (299)
T 4g31_A          161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME--RVR  235 (299)
T ss_dssp             CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH--HHH
T ss_pred             cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH--HHH
Confidence                                                               49999999999995   6754322  222


Q ss_pred             HHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          167 SIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+........+                         ..+...++.+.+|+++||+.||++|||+.|+++||||++++
T Consensus       236 ~~~~~~~~~~p-------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          236 TLTDVRNLKFP-------------------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHHHHTTCCC-------------------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHHHhcCCCC-------------------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            22222111100                         01123467889999999999999999999999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.8e-49  Score=341.82  Aligned_cols=215  Identities=16%  Similarity=0.219  Sum_probs=177.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      |++|++++.||+|+||.||+|+++. +  ++.||+|+. .........+.+|+.+|+.++||||+++    .+.+.+|+|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~-t--g~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv  232 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERA-T--GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI  232 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECC-C--CCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            4789999999999999999999988 6  888999973 2223335678899999999999999998    678899999


Q ss_pred             EeccCcccHHHHHhhh----cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEEE------------
Q 036362           76 FEYTGLLNLRKVIKNF----LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIAR------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~----~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~D------------  138 (246)
                      |||++||+|.+++...    ++.....++.||+.||.|||++||+||||||+|||++.+. ...+++|            
T Consensus       233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~  312 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  312 (573)
T ss_dssp             EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred             EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence            9999999999998542    2334455566999999999999999999999999998652 2445554            


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                +||+||++|+|++|.+||.+.+....+..+.........               
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~---------------  377 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD---------------  377 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCS---------------
T ss_pred             eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCc---------------
Confidence                                      899999999999999999988887777766653211111               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                ..+..+|+++++||.+||..||.+|||+.|+|+||||+..+
T Consensus       378 ----------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          378 ----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             ----------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             ----------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence                      11257899999999999999999999999999999999754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.3e-49  Score=339.31  Aligned_cols=213  Identities=16%  Similarity=0.218  Sum_probs=168.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhh---hcccccCCCCceEEe----cCC
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTK---ISPLKEMDYPLIFRK----END   69 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E---~~~l~~l~~~~i~~~----~~~   69 (246)
                      |++|+++++||+|+||+||+|+++. +  ++.||+|+..    ..........+|   +.+++.++||||+++    .+.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~-t--g~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~  264 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKAD-T--GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP  264 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred             hHHeEEEEEEecccCeEEEEEEECC-C--CCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC
Confidence            5799999999999999999999988 6  8899999821    122333344444   566777899999998    678


Q ss_pred             ceEEEEEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------  138 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------  138 (246)
                      +.+|+||||++||+|.+++.+.   ++..+..+++||+.||.|||++||+||||||+|||++.+| ..+++|        
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G-~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS  343 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS-CEEECCCTTCEECS
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC-CEEecccceeeecC
Confidence            8999999999999999999764   2344455566999999999999999999999999999877 455555        


Q ss_pred             ------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          139 ------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       139 ------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                    +||+||++|+|++|.+||.+.+..............+.            
T Consensus       344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~------------  411 (689)
T 3v5w_A          344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV------------  411 (689)
T ss_dssp             SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC------------
T ss_pred             CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC------------
Confidence                                          99999999999999999986543322211111111100            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                    ..+..+|+++++||.+||+.||.+|++     ++|+++||||++++
T Consensus       412 --------------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          412 --------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             --------------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             --------------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence                          012568999999999999999999998     79999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=3.4e-47  Score=302.96  Aligned_cols=237  Identities=35%  Similarity=0.573  Sum_probs=194.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|++++.||+|+||.||+|++..    ++.||+|...   ........+.+|+.+++.++||||+++    ...+..+
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   76 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQNNY----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLV   76 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEETT----SCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEE
T ss_pred             CccchhhhhcccCCCEEEEEEEcCC----CCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEE
Confidence            6899999999999999999999843    6788888722   223345678899999999999999998    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||++ ++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus        77 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           77 LVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPV  154 (288)
T ss_dssp             EEEECCS-EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-CEEECCTTHHHHHCC--
T ss_pred             EEEEecC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-CEEEeECccccccCccc
Confidence            9999999 69999886532    122233444999999999999999999999999998765 2333             


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                 +|+||+||++++|++|..||.+.........+.+..+.+....++.....+.+
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY  234 (288)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence                                       45999999999999999999998888888899999999888877766655555


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...........+....+.+++++.+|+.+||+.||++|||+.|+++||||++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~n  288 (288)
T 1ob3_A          235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN  288 (288)
T ss_dssp             CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC--
T ss_pred             ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcC
Confidence            444444444555666678999999999999999999999999999999999753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-47  Score=305.31  Aligned_cols=208  Identities=17%  Similarity=0.144  Sum_probs=160.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      +++++.++||+|+||+||+|++..      .||||+..   ......+.+.+|+.++++++||||+++   ...+.+++|
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iV  109 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIV  109 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEE
Confidence            578899999999999999998755      26777622   222234678999999999999999998   455678999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE--------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA--------------  137 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~--------------  137 (246)
                      |||++||||.+++.....    .....++.||+.||.|||++||+||||||+|||++.++ .+|++              
T Consensus       110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~-~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTE-EEEECCCSSCBC-------
T ss_pred             EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCC-cEEEeeccCceecccCCcc
Confidence            999999999999965321    12223444999999999999999999999999999665 33443              


Q ss_pred             ------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          138 ------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       138 ------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                    |+|||||++|||++|+.||.+.+........... +...           
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~-~~~~-----------  256 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-GYAS-----------  256 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT-TCCC-----------
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhc-CCCC-----------
Confidence                                          4999999999999999999887665555444432 1110           


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHH------hcCCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA------LNHHYY  239 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~------l~h~~~  239 (246)
                                 ......++.+++++.+|+.+||+.||++|||+.|+      |+|++-
T Consensus       257 -----------p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          257 -----------PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             -----------CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             -----------CCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence                       01112235789999999999999999999999986      466653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.3e-48  Score=308.69  Aligned_cols=209  Identities=16%  Similarity=0.136  Sum_probs=164.0

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|.+.+.||+|+||+||+|++...  ...+..||+|.. .......+.+.+|+.++++++||||+++    .+.+..++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            4788999999999999999987531  112668999983 2223335678999999999999999998    56778999


Q ss_pred             EEeccCcccHHHHHhhhc-----------ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE
Q 036362           75 IFEYTGLLNLRKVIKNFL-----------DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~-----------~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      ||||+++|||.+++.+..           ...++     .++.||+.||.|||+++|+||||||+|||++.++ .+|++|
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~-~~Ki~D  171 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL-LVKIGD  171 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CEEECC
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC-cEEECC
Confidence            999999999999996532           12233     2344999999999999999999999999999765 566666


Q ss_pred             -----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCC
Q 036362          139 -----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPS  176 (246)
Q Consensus       139 -----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~  176 (246)
                                                               +|||||++|||++ |+.||.+.+..+....+...  ...
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~--~~~  249 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG--RVL  249 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT--CCC
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--CCC
Confidence                                                     9999999999998 89999988776666655542  110


Q ss_pred             cCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                                ..++.+++++.+|+.+||+.||++|||++|+  |+|+++
T Consensus       250 --------------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~  286 (299)
T 4asz_A          250 --------------------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN  286 (299)
T ss_dssp             --------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred             --------------------------CCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence                                      0125688999999999999999999999998  445554

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.8e-47  Score=306.69  Aligned_cols=238  Identities=32%  Similarity=0.557  Sum_probs=193.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++++.||+|+||+||+|++..    ++.||+|...   ........+.+|+.+++.++||||+++    .+.+..+
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   95 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQ----GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT   95 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETT----SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECC----CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence            4789999999999999999999855    6789999832   222234678899999999999999998    6678899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||++ ++|.+++....    +.....+..|++.||.|||++||+||||||+|||++.++ ..++             
T Consensus        96 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~-~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           96 LVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPV  173 (311)
T ss_dssp             EEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEETTSCC
T ss_pred             EEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC-CEEEccCcCceecCCCc
Confidence            9999999 68888886532    222233444999999999999999999999999998766 2333             


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                 +|+||+||++++|++|+.||.+....+....+....+.+.+..++.....+.+
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence                                       34999999999999999999999888899999999999988887766555433


Q ss_pred             cc-ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IY-CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      .. .........+....+.+++++.+|+.+||+.||.+|||++|+|+||||+++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence            22 22223334455566789999999999999999999999999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=8.2e-47  Score=301.32  Aligned_cols=239  Identities=33%  Similarity=0.517  Sum_probs=188.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|++++.||+|+||+||+|++.. +  ++.||+|+..   ........+.+|+.+++.++||||+++    .+.+..+
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   77 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRE-T--HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECC-C--CceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEE
Confidence            6899999999999999999999987 5  7889999832   222334678899999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||++ +++.+.+....    +.....+..|++.||.|||++||+||||||+|||++.++ ..++             
T Consensus        78 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           78 LVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLANFGLARAFGIPV  155 (292)
T ss_dssp             EEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECCSCC
T ss_pred             EEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEeecccceecCCcc
Confidence            9999999 67766665422    222333444999999999999999999999999998765 2333             


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCC-CCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPL-SEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 +|+||+||++++|++|..| |.+.+.......+.+..+.+....|+.....+.
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  235 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD  235 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred             ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence                                       4599999999999987665 677777788899999999999888877665544


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      +................+.+++++++|+++||+.||++|||++|+++||||+++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~p  291 (292)
T 3o0g_A          236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC--
T ss_pred             ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCCC
Confidence            43222222222334445678999999999999999999999999999999998753

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.3e-47  Score=309.04  Aligned_cols=206  Identities=15%  Similarity=0.148  Sum_probs=164.2

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|.+.++||+|+||+||+|++...  ...+..||||+. .......+.+.+|+.++++++||||+++    .+.+..++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            4678889999999999999987531  122678999983 2233335679999999999999999998    56778999


Q ss_pred             EEeccCcccHHHHHhhhcc-------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE
Q 036362           75 IFEYTGLLNLRKVIKNFLD-------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~-------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~  136 (246)
                      ||||+++|+|.+++.+...             ..+.     .++.||+.||.|||+++|+||||||+|||++.++ .+|+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~-~~Ki  199 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL-VVKI  199 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT-EEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCC-cEEE
Confidence            9999999999999975321             1122     3444999999999999999999999999999655 5666


Q ss_pred             EE-----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCC
Q 036362          137 AR-----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       137 ~D-----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                      +|                                         +|||||++|||++ |+.||.+.+..+....+......
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~  279 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL  279 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCC
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            66                                         9999999999998 89999988776666655542110


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      +                            .++.+++++.+|+.+||+.||++|||+.|++++
T Consensus       280 ~----------------------------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          280 E----------------------------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             C----------------------------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             C----------------------------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            0                            125688999999999999999999999999764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2e-47  Score=305.31  Aligned_cols=206  Identities=17%  Similarity=0.113  Sum_probs=162.9

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++++.++||+|+||+||+|++...  ...++.||||...  ......+.+.+|+.++++++||||+++    ...+..+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            4678899999999999999987431  1125689999832  233345689999999999999999998    5667899


Q ss_pred             EEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee
Q 036362           74 QIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV  134 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~  134 (246)
                      +||||+++|||.+++.....              ..+.     .++.||+.||.|||+++|+||||||+|||++.++ .+
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~-~~  184 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL-NV  184 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CE
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCC-CE
Confidence            99999999999999964321              1122     3444999999999999999999999999999665 56


Q ss_pred             eEEE-----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhh
Q 036362          135 KIAR-----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       135 ~~~D-----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~  172 (246)
                      |++|                                         +|||||+++||++ |..||.+.+..+....+....
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~  264 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ  264 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTC
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            6666                                         9999999999998 899999887766555554311


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ..|                            .++.+++++.+|+.+||+.||++|||+.|++++
T Consensus       265 ~~~----------------------------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          265 VLP----------------------------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             CCC----------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC----------------------------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            111                            125688999999999999999999999999876

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.9e-46  Score=304.11  Aligned_cols=242  Identities=31%  Similarity=0.546  Sum_probs=192.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++.+.||+|+||.||+|.+.. +  ++.||+|+..   ........+.+|+.+++.++||||+++    ...+..+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTV-T--NETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT-T--TEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECC-C--CceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            4789999999999999999999887 5  7889999832   223335578899999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----CeeeEE---------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----YTVKIA---------  137 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----~~~~~~---------  137 (246)
                      +||||++ ++|.+++.....   .....+..||+.||.|||++||+||||||+|||++.++    ...+++         
T Consensus       110 lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             EEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             EEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            9999999 699999976432   22233444999999999999999999999999996332    123333         


Q ss_pred             -------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          138 -------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       138 -------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                     |+||+||++++|++|..||.+.........+....+.|....+++....
T Consensus       189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (329)
T 3gbz_A          189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL  268 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence                                           4999999999999999999999998999999999999998888877666


Q ss_pred             cccccccCCCCcchhhhh-CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCCC
Q 036362          187 FPFIYCYEESEPKDLAIL-LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP  246 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  246 (246)
                      +.+....+......+... ...+++++.+|+.+||+.||.+|||+.|+|+||||++.+-.|
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~P  329 (329)
T 3gbz_A          269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFDP  329 (329)
T ss_dssp             TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCSCC
T ss_pred             hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCCCC
Confidence            665544444443333322 234789999999999999999999999999999999987654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.3e-46  Score=303.00  Aligned_cols=238  Identities=30%  Similarity=0.518  Sum_probs=193.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      |++|++++.||+|+||.||+|++.. +  ++.||+|...  ........+.+|+.+++.++||||+++    ...+..++
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKL-T--DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   77 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECC-C--CcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEE
Confidence            6899999999999999999999987 5  7789999822  223334467789999999999999998    56788999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ||||++ ++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++ ..++              
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-~~kl~Dfg~a~~~~~~~~  155 (324)
T 3mtl_A           78 VFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-ELKLADFGLARAKSIPTK  155 (324)
T ss_dssp             EEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC-CEEECSSSEEECC-----
T ss_pred             Eecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC-CEEEccCcccccccCCcc
Confidence            999999 799998876432    22233444999999999999999999999999998766 2233              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+||++++|++|..||.+.+..++...+.+..+.|....|++......+.
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (324)
T 3mtl_A          156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK  235 (324)
T ss_dssp             -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred             ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence                                      359999999999999999999999999999999999999998888765443322


Q ss_pred             -cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          191 -YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       191 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                       ...+...........+.+++++.+|+.+||+.||.+|||++|+|+||||.++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence             22333333444555678999999999999999999999999999999999864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.3e-46  Score=303.59  Aligned_cols=238  Identities=27%  Similarity=0.444  Sum_probs=177.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .++|++++.||+|+||.||+|.+.. +  ++.||+|..  .........+.+|+.+++.++||||+++    ...+..++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   80 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKT-T--GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL   80 (317)
T ss_dssp             ---------------CEEEEEECSS-S--CCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECC-C--CcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence            3689999999999999999999877 5  788999982  2234455788999999999999999998    56789999


Q ss_pred             EEeccCcccHHHHHhhhcc----cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------  136 (246)
                      ||||++ ++|.+++.....    ..+..     +..||+.||.|||++||+||||||+|||++.++ ..++         
T Consensus        81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG-QLKLGDFGLARAF  158 (317)
T ss_dssp             EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCSSCEET
T ss_pred             EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCC-CEEECcCccceec
Confidence            999999 799999865321    12222     333999999999999999999999999998766 2333         


Q ss_pred             -------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 -------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 -------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                     +|+||+||++++|++|..||.+.+.......+.+..+.+....|+....
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred             CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence                                           4599999999999999999999988889999999999988877776555


Q ss_pred             ccccccccCCCCcchhh-----hhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          186 FFPFIYCYEESEPKDLA-----ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+.+.............     .....+++++.+|+.+||+.||++|||+.|+|+||||++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence            44443222222222211     12346889999999999999999999999999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.3e-45  Score=292.94  Aligned_cols=237  Identities=30%  Similarity=0.472  Sum_probs=187.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc------CCCCCcchhhhhhcccccCC---CCceEEe-----c
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI------IPDGVPISILTKISPLKEMD---YPLIFRK-----E   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~------~~~~~~~~~~~E~~~l~~l~---~~~i~~~-----~   67 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+..      ..........+|+.+++.++   ||||+++     .
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPH-S--GHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTT-T--CCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECC-C--CcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            689999999999999999999877 5  7889999822      22333457788888888775   9999987     1


Q ss_pred             C----CceEEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--
Q 036362           68 N----DKLVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--  136 (246)
Q Consensus        68 ~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--  136 (246)
                      .    ....+++|||++ ++|.+++.......+.     .+..||+.||.|||++||+||||||+|||++.++ ..++  
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~-~~kl~D  163 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLAD  163 (308)
T ss_dssp             CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS-CEEECS
T ss_pred             cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-CEEEee
Confidence            1    126899999999 7999999775433233     3344999999999999999999999999998665 3334  


Q ss_pred             ------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          137 ------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       137 ------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                          +|+||+||++++|++|.+||.+.........+....+.+....|
T Consensus       164 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (308)
T 3g33_A          164 FGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW  243 (308)
T ss_dssp             CSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             CccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence                                                44999999999999999999999999999999999999988887


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                      +.....+..  .+............+.+++++.+|+.+||+.||++|||+.|+|+||||++....
T Consensus       244 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~~~  306 (308)
T 3g33_A          244 PRDVSLPRG--AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN  306 (308)
T ss_dssp             CSSCSSCGG--GSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC------
T ss_pred             cchhhcccc--ccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCCCC
Confidence            765554422  233444455566678899999999999999999999999999999999986543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.4e-46  Score=302.52  Aligned_cols=207  Identities=14%  Similarity=0.178  Sum_probs=161.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccCCC-CceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEMDY-PLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~-~~i~~~-----~~~~~   71 (246)
                      ++|++.+.||+|+||+||+|++..+.  ...+.||+|.....  ......+.+|+.++.+++| |||+++     ..++.
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~  143 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  143 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence            57999999999999999999986522  12457888883222  2234578899999999965 899988     33467


Q ss_pred             EEEEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~  132 (246)
                      +++|||||++|+|.+++.+...              ..+.     .++.||+.||.|||+++|+||||||+|||++.++ 
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~-  222 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-  222 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCC-
Confidence            8999999999999999975321              1122     2344999999999999999999999999999766 


Q ss_pred             eeeEEE-----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHH
Q 036362          133 TVKIAR-----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFR  170 (246)
Q Consensus       133 ~~~~~D-----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~  170 (246)
                      .+|++|                                         +|||||++|||++ |..||.+......+.....
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~  302 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  302 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            566666                                         9999999999998 8999988665554444333


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ....+                           ..++.+++++.+|+.+||+.||++|||+.|+++|
T Consensus       303 ~g~~~---------------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          303 EGTRM---------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCC---------------------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            21110                           0124678999999999999999999999999987

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.9e-46  Score=315.49  Aligned_cols=236  Identities=24%  Similarity=0.302  Sum_probs=183.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----------cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----------EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~   68 (246)
                      ++|++++.||+|+||+||+|.+.. +  ++.||+|+...   .......+.+|+.+++.++||||+++          ..
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAV-L--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT-T--TEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             CCeEEEEEeecCCCeEEEEEEECC-C--CCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            689999999999999999999987 6  78899998322   23335678899999999999999998          12


Q ss_pred             CceEEEEEeccCcccHHHHHhh-hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE----------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKN-FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA----------  137 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~----------  137 (246)
                      ....|+||||++ ++|.+.+.. ........++.||+.||.|||++||+||||||+|||++.++ ..+++          
T Consensus       139 ~~~~~lv~E~~~-~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          139 FQDVYLVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGT  216 (464)
T ss_dssp             CCEEEEEEECCS-EEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEECCCCCC-----
T ss_pred             CCeEEEEEeCCC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCC-CEEEEEEEeeeecCC
Confidence            257899999999 667776653 22333444556999999999999999999999999999766 34444          


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-cc
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-FP  188 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  188 (246)
                                                  |+||+||++++|++|++||.+.+..+++..+.+.+|.|.++.+...... ..
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~  296 (464)
T 3ttj_A          217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  296 (464)
T ss_dssp             CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred             CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence                                        4999999999999999999999999999999999999988776554321 11


Q ss_pred             cccccCCCCcchhhhhCCC------------CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPD------------LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      +....+......+....+.            .++++++||++||..||++|||++|+|+||||+..
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            1111222222222222211            15789999999999999999999999999999853

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-46  Score=304.56  Aligned_cols=237  Identities=25%  Similarity=0.383  Sum_probs=185.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----cC------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----EN------   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~~------   68 (246)
                      ++|++++.||+|+||.||+|.+.. +  ++.||+|.....   ......+.+|+.+++.++||||+++    ..      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGR-T--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETT-T--CCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             ceEEEeEEeeecCCeEEEEEEECC-C--CCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence            579999999999999999999977 5  788999983221   2224567899999999999999987    11      


Q ss_pred             CceEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE---------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA---------  137 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~---------  137 (246)
                      ....|+||||++ ++|.+++....  ......++.||+.||.|||++||+||||||+|||++.++ ..+++         
T Consensus       102 ~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          102 FTDFYLVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC-ELKILDFGLARQAD  179 (367)
T ss_dssp             CCCCEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEECC
T ss_pred             CceEEEEEecCC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC-CEEEEeeecccccc
Confidence            245799999994 99999987532  223333445999999999999999999999999999766 34444         


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--  187 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  187 (246)
                                                  |+||+||++++|++|+.||.+.+..+++..+....|.|+.+.+..+....  
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~  259 (367)
T 1cm8_A          180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  259 (367)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence                                        49999999999999999999999999999999999998877655544321  


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+....+......+...++..++++.+|+++||..||.+|||+.|+|+||||+++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            22233444445556666778999999999999999999999999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-44  Score=294.80  Aligned_cols=236  Identities=25%  Similarity=0.451  Sum_probs=191.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC------CCCCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII------PDGVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|....      .......+.+|+.+++.++||||+++    .....
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKN-T--NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSS-C--CSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             cccEEEeEEeecCCEEEEEEEECC-C--CcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            689999999999999999999977 5  77899998321      12224578899999999999999988    56778


Q ss_pred             EEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------  136 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------  136 (246)
                      .++||||++ ++|.+++....    ......+..|++.||.|||++||+||||||+|||++.++ ..++           
T Consensus        87 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A           87 ISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG-VLKLADFGLAKSFGS  164 (346)
T ss_dssp             CEEEEECCS-EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEECCCGGGSTTTS
T ss_pred             eEEEEEcCC-CCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC-CEEEEecccceeccC
Confidence            999999999 69998886532    333344555999999999999999999999999998766 2333           


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+||+||++++|++|.+||.+......+..+....+.+....|+.....+
T Consensus       165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence                                         359999999999999999999999888999999999999999888877665


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+.. ................++++.+|+++||..||.+|||+.|+|+||||++.+
T Consensus       245 ~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          245 DYVT-FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             TCCC-CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             cccc-ccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence            5532 222233344556678899999999999999999999999999999998753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-44  Score=296.72  Aligned_cols=214  Identities=19%  Similarity=0.206  Sum_probs=173.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC-------CcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-------VPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..||+|.......       ....+.+|+.+++.++||||+++    ....
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~-~--~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKS-T--GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             hceEEeeEEeeCcCEEEEEEEECC-C--CCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence            479999999999999999999987 6  78899998221111       23578899999999999999998    6678


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---eeeEEE------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKIAR------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---~~~~~D------  138 (246)
                      ..++||||++|++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.++.   ..+++|      
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            9999999999999999996532   2233344459999999999999999999999999986552   355555      


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||++++|++|..||.+.+.......+........          
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~----------  238 (361)
T 2yab_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD----------  238 (361)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC----------
T ss_pred             cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC----------
Confidence                                            99999999999999999998877666655554211100          


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                     ...+..+++++++||.+||..||.+|||+.|+++||||+++.
T Consensus       239 ---------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          239 ---------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             ---------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             ---------------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence                           112357899999999999999999999999999999999753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=7.7e-45  Score=294.25  Aligned_cols=209  Identities=18%  Similarity=0.248  Sum_probs=171.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|+...   .......+.+|+.+++.++||||+++    ...+..+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHIL-T--GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY   90 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence            3689999999999999999999977 5  78899998322   22234568899999999999999998    5678999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---------------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---------------  135 (246)
                      +||||+++++|.+++....   +.....+..|++.||.|||++||+||||||+|||++.++ ..+               
T Consensus        91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-CEEECSTTCCGGGSSSCG
T ss_pred             EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC-CEEEeeccCceecCCCCc
Confidence            9999999999999996542   223333444999999999999999999999999998766 222               


Q ss_pred             ------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          136 ------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       136 ------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                              .+|+||+||++++|++|..||.+.+.......+...  ..                
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~----------------  231 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--KY----------------  231 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC----------------
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC----------------
Confidence                                    356999999999999999999987766655555441  10                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                 ..+..+++++.+|+++||..||.+|||++|+++||||+..
T Consensus       232 -----------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          232 -----------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             -----------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence                       0113578999999999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.5e-44  Score=288.97  Aligned_cols=213  Identities=21%  Similarity=0.304  Sum_probs=172.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||+||+|.+.. +  ++.||+|. ..........+.+|+.+++.++||||+++    ...+..++||
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   96 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVA-T--GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTT-T--CCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hceeeeeeeccCCCeEEEEEEECC-C--CcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence            589999999999999999999877 5  78899998 33344456678999999999999999998    5567899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------------  136 (246)
                      ||+++++|.+++....  +.....+..|++.||.|||++||+||||||+|||++.++ ..++                  
T Consensus        97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~  175 (297)
T 3fxz_A           97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRST  175 (297)
T ss_dssp             ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-CEEECCCTTCEECCSTTCCBCC
T ss_pred             ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC-CEEEeeCCCceecCCcccccCC
Confidence            9999999999997632  223334445999999999999999999999999998766 3333                  


Q ss_pred             ---------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          137 ---------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       137 ---------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                           +|+||+||++++|++|..||...........+... +.+..                  
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-~~~~~------------------  236 (297)
T 3fxz_A          176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL------------------  236 (297)
T ss_dssp             CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH-CSCCC------------------
T ss_pred             ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCC------------------
Confidence                                 35999999999999999999887766655554442 11110                  


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                             ..+..+++.+.+|+.+||+.||.+|||+.|+++||||+...+
T Consensus       237 -------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          237 -------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             -------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             -------CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence                   001357899999999999999999999999999999997643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.7e-45  Score=308.25  Aligned_cols=238  Identities=27%  Similarity=0.449  Sum_probs=177.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe---------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK---------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~   69 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+...   .......+.+|+.+++.++||||+++         ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  129 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKL-E--KRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF  129 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC-----CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECC-C--CcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence            579999999999999999999987 6  78899997322   12234578899999999999999998         122


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      ...|+||||++ ++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.++               
T Consensus       130 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          130 DELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             CCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             ceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            67999999998 89999987532   223344455999999999999999999999999998764               


Q ss_pred             -----------------------------------------Ceee----------EEEeehhhHHHHHHhh---------
Q 036362          132 -----------------------------------------YTVK----------IARLISVGCIFAEMVI---------  151 (246)
Q Consensus       132 -----------------------------------------~~~~----------~~Di~slG~i~~~l~~---------  151 (246)
                                                               .+|+          .+|+||+||+++||++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence                                                     0011          1359999999999998         


Q ss_pred             --CCCCCCCCc--------------------chHHHHHHHHhhCCCCcCcCCCCCCc--cccccccCCCCcchhhhhCCC
Q 036362          152 --QEPLSEDAS--------------------ESRERISIFRLMGEPSEETLPGVTTF--FPFIYCYEESEPKDLAILLPD  207 (246)
Q Consensus       152 --g~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  207 (246)
                        |.++|.+..                    ..+++..+...+|.|..+.+......  ..+....+......+...++.
T Consensus       289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (458)
T 3rp9_A          289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA  368 (458)
T ss_dssp             GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred             ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence              667776543                    25678889999999987765544332  122333444455556667788


Q ss_pred             CChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       208 ~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .++++.+||++||..||.+|||++|+|+||||+++.
T Consensus       369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          369 SSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence            999999999999999999999999999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.2e-44  Score=303.58  Aligned_cols=238  Identities=28%  Similarity=0.440  Sum_probs=186.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCC-----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----END-----   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~-----   69 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+...   .......+.+|+.+++.++||||+++    ...     
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKN-T--EKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-T--TEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             CCEEEEEEEeecCCEEEEEEEECC-C--CcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            689999999999999999999987 6  78899998322   12234678899999999999999988    112     


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------------  132 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------------  132 (246)
                      ...|+||||++ ++|.+++....   ......++.||+.||.|||++||+||||||+|||++.++.              
T Consensus       103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            67999999999 79999997632   2233344559999999999999999999999999987650              


Q ss_pred             -------------------------------------ee----------eEEEeehhhHHHHHHhh-----------CCC
Q 036362          133 -------------------------------------TV----------KIARLISVGCIFAEMVI-----------QEP  154 (246)
Q Consensus       133 -------------------------------------~~----------~~~Di~slG~i~~~l~~-----------g~~  154 (246)
                                                           +|          ..+|+||+||++++|++           |.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p  261 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP  261 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence                                                 01          11359999999999997           445


Q ss_pred             CCCCCc-----------------chHHHHHHHHhhCCCCcCcCCCCCCcc--ccccccCCCCcchhhhhCCCCChHHHHH
Q 036362          155 LSEDAS-----------------ESRERISIFRLMGEPSEETLPGVTTFF--PFIYCYEESEPKDLAILLPDLEPAGVDL  215 (246)
Q Consensus       155 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l  215 (246)
                      +|.+.+                 ..+++..+.+.+|.|..+.+.......  .+....+......+....+.+++++.+|
T Consensus       262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  341 (432)
T 3n9x_A          262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL  341 (432)
T ss_dssp             SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence            555443                 356888899999999887665544332  2233344444555666678899999999


Q ss_pred             HHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          216 LQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       216 l~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      |++||..||.+|||++|+|+||||+++.
T Consensus       342 l~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          342 LESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             HHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence            9999999999999999999999999874

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.2e-45  Score=293.42  Aligned_cols=214  Identities=19%  Similarity=0.240  Sum_probs=173.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      .++|++.+.||+|+||.||+|.+.. +  ++.+|+|...........+.+|+.+++.++||||+++    .+.+..++||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETS-S--KKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECC-C--CcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence            3689999999999999999999987 6  7889999844444455678899999999999999998    5678999999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC-CCeeeE---------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS-DYTVKI---------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~-~~~~~~---------------  136 (246)
                      ||++|++|.+++....    +.....+..|++.||.|||++||+||||||+|||++.+ +...++               
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            9999999999996532    22233344499999999999999999999999999863 223333               


Q ss_pred             -----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                             +|+||+||++++|++|..||.+.........+........                 
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----------------  223 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD-----------------  223 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC-----------------
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC-----------------
Confidence                                   3499999999999999999998777666665555211100                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                              ...++.+++++.+|+.+||..||.+|||+.|+|+||||++.
T Consensus       224 --------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          224 --------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             --------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             --------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence                    11235789999999999999999999999999999999874

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=3.2e-45  Score=300.81  Aligned_cols=237  Identities=27%  Similarity=0.363  Sum_probs=184.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----c------C
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----E------N   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~------~   68 (246)
                      ++|++++.||+|+||.||+|.+.. +  ++.||+|+....   ......+.+|+.+++.++||||+++    .      .
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTK-T--GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETT-T--TEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CceEEeeEEeecCCeEEEEEEECC-C--CCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            589999999999999999999877 6  788999983221   2234577899999999999999987    1      1


Q ss_pred             CceEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------  136 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------  136 (246)
                      ....++++++++ ++|.+++....  ......++.||+.||.|||++||+||||||+|||++.++ ..++          
T Consensus       106 ~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-~~kL~DFG~a~~~~  183 (367)
T 2fst_X          106 FNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-ELKILDFGLARHTA  183 (367)
T ss_dssp             CCCCEEEEECCC-EECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEECC--------
T ss_pred             CCeEEEEecccC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC-CEEEeecccccccc
Confidence            266899999996 99999886521  222333445999999999999999999999999999766 3333          


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--  187 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  187 (246)
                                                 +|+||+||++++|++|+.||.+.+...++..+.+..|.|..+.+..+....  
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~  263 (367)
T 2fst_X          184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR  263 (367)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred             ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence                                       349999999999999999999999999999999999999887766554332  


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+...........+....+..++.+.+|+++||..||.+|||+.|+|+||||++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence            22233344445556666778999999999999999999999999999999999863

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.3e-44  Score=290.70  Aligned_cols=210  Identities=18%  Similarity=0.256  Sum_probs=172.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++++.||+|+||+||+|++.. +  ++.||+|+..    ........+.+|+.+++.++||||+++    ...+..
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~   80 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKA-T--GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEE
Confidence            4789999999999999999999987 5  7889999822    134456678899999999999999988    667899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      ++||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++            
T Consensus        81 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-~vkL~DFG~a~~~~~~~  159 (337)
T 1o6l_A           81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCSCCTT
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC-CEEEeeccchhhcccCC
Confidence            99999999999999987642   223334455999999999999999999999999998776 33333            


Q ss_pred             ---------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          138 ---------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 |+||+||++++|++|..||.+.+.......+...  ..               
T Consensus       160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~---------------  222 (337)
T 1o6l_A          160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EI---------------  222 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC---------------
T ss_pred             CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC--CC---------------
Confidence                                       4999999999999999999887766555555441  10               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                  ..+..+++++++|+.+||+.||.+||     +++|+++||||++++
T Consensus       223 ------------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          223 ------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             ------------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence                        01246789999999999999999999     999999999998863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=294.39  Aligned_cols=210  Identities=16%  Similarity=0.244  Sum_probs=173.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      +++|++++.||+|+||+||+|++.. +  ++.||+|+..    ........+.+|..+++.+ +||||+++    ...+.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKE-T--GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcC-C--CCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            4789999999999999999999987 6  7889999822    1234456788899999988 69999998    66789


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      .|+||||++|++|.+++.+..   +.....++.||+.||.|||++||+||||||+|||++.++ ..+++|          
T Consensus        99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g-~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG-HCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC-CEEEccccceeecccC
Confidence            999999999999999997642   233344455999999999999999999999999999776 344444          


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+||++++|++|..||.+.+.......+...  ..              
T Consensus       178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~--------------  241 (353)
T 3txo_A          178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EV--------------  241 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC--------------
T ss_pred             CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CC--------------
Confidence                                         999999999999999999988877776666652  10              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH------HHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV------NDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~------~e~l~h~~~~~~~  243 (246)
                                   ..+..+++++.+|+++||+.||.+||++      +|+++||||++++
T Consensus       242 -------------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          242 -------------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             -------------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence                         0013578999999999999999999999      8999999999863

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.4e-44  Score=295.55  Aligned_cols=236  Identities=28%  Similarity=0.389  Sum_probs=189.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---------cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---------ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~   70 (246)
                      ++|++++.||+|+||.||+|.+.. +  +..||+|.....  ......+.+|+.+++.++||||+++         ....
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNL-N--KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECC-C--CeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            489999999999999999999977 5  788999983321  2223678899999999999999987         1225


Q ss_pred             eEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      ..++|||+++ ++|.+++....  ......+..||+.||.|||++||+||||||+|||++.++ ..++            
T Consensus       104 ~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          104 DVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPD  181 (364)
T ss_dssp             CEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEECCGG
T ss_pred             eEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCC-CEEEEeCcceEecCCC
Confidence            7899999999 79999987632  223333445999999999999999999999999998765 2233            


Q ss_pred             -------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 -------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 -------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                     +|+||+||++++|++|+.||.+....+....+....+.|..+.+.....
T Consensus       182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  261 (364)
T 3qyz_A          182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  261 (364)
T ss_dssp             GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence                                           3599999999999999999999999999999999999988776554433


Q ss_pred             cc--ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          186 FF--PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ..  .+....+......+....+.+++++.+|+.+||..||.+|||+.|+|+||||++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            22  1122233333444556667899999999999999999999999999999999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.4e-44  Score=289.34  Aligned_cols=240  Identities=24%  Similarity=0.416  Sum_probs=180.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC---cchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV---PISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++++.||+|+||.||+|++.. +  ++.||+|........   ...+.+|+.+++.++||||+++    ...+..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRD-T--GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLH   78 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCC-C--CcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEE
Confidence            5899999999999999999999987 5  778999973322222   3567789999999999999988    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      +||||+++++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++ ..++              
T Consensus        79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~  157 (311)
T 4agu_A           79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS-VIKLCDFGFARLLTGPSD  157 (311)
T ss_dssp             EEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECC----
T ss_pred             EEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC-CEEEeeCCCchhccCccc
Confidence            9999999999988876532   222233444999999999999999999999999998665 2233              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+|+++++|++|..||.+....+....+....+...+...........+.
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS  237 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence                                      359999999999999999999988888887777777665433211000000000


Q ss_pred             c--ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          191 Y--CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       191 ~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      .  ..............+.+++++.+|+.+||..||.+|||++|+++||||+++..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence            0  00001111223334678999999999999999999999999999999999753

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-44  Score=297.17  Aligned_cols=233  Identities=24%  Similarity=0.415  Sum_probs=178.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----c---------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----E---------   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~---------   67 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....   ......+|+.+++.++||||+++     .         
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~-~--~~~vAiK~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIE-S--GKRFALKKVLQ---DPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETT-T--CCEEEEEEEEC---CTTSCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             ceEEEEEEEEeccCEEEEEEEECC-C--CCEEEEEEEec---CcchHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            689999999999999999999987 6  88999998322   23445689999999999999987     1         


Q ss_pred             ----------------------------CCceEEEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhh
Q 036362           68 ----------------------------NDKLVYQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHS  112 (246)
Q Consensus        68 ----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~  112 (246)
                                                  .....++||||++ ++|.+.+....  ...+     ..++.||+.||.|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  159 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS  159 (383)
T ss_dssp             -----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                        1234889999999 78888775421  1222     3344499999999999


Q ss_pred             CceeeccCCCCCeEEecCCCeeeEEE---------------------------------------eehhhHHHHHHhhCC
Q 036362          113 NRCLHGRLNPYQALINLSDYTVKIAR---------------------------------------LISVGCIFAEMVIQE  153 (246)
Q Consensus       113 ~~i~H~Dikp~Nil~~~~~~~~~~~D---------------------------------------i~slG~i~~~l~~g~  153 (246)
                      +||+||||||+|||++..+...+++|                                       +||+||++++|++|.
T Consensus       160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  239 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK  239 (383)
T ss_dssp             TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence            99999999999999985443444444                                       999999999999999


Q ss_pred             CCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhh-hCCCCChHHHHHHHHhhhcCCCCCCCHHH
Q 036362          154 PLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAI-LLPDLEPAGVDLLQKMLRVNPKERITVND  232 (246)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~l~~dp~~R~s~~e  232 (246)
                      .||.+.+..++...+....|.|..+.+........ ...++......+.. .....++++.+|+.+||..||.+|||+.|
T Consensus       240 ~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  318 (383)
T 3eb0_A          240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYT-EVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE  318 (383)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC---CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccc-cccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            99999999999999999999987664332211100 01112222222222 34568999999999999999999999999


Q ss_pred             HhcCCCCcCC
Q 036362          233 ALNHHYYRDV  242 (246)
Q Consensus       233 ~l~h~~~~~~  242 (246)
                      +++||||+++
T Consensus       319 ~l~hp~f~~~  328 (383)
T 3eb0_A          319 AMAHPFFDHL  328 (383)
T ss_dssp             HHTSGGGHHH
T ss_pred             HhcCHHHHHH
Confidence            9999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9e-45  Score=300.48  Aligned_cols=238  Identities=26%  Similarity=0.406  Sum_probs=175.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCC-CCceEEe------cCCc
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMD-YPLIFRK------ENDK   70 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~-~~~i~~~------~~~~   70 (246)
                      +++|++++.||+|+||.||+|.+.. +  ++.||+|...   ..........+|+.+++.+. ||||+++      .+..
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRR-T--GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETT-T--CCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECC-C--CCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            3689999999999999999999987 6  7889999732   12233456788999999997 9999988      2345


Q ss_pred             eEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC----------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY----------------  132 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~----------------  132 (246)
                      ..|+||||++ ++|.+++....  ......++.||+.||+|||++||+||||||+|||++.++.                
T Consensus        85 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           85 DVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             CEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            7999999999 79999987632  2222334449999999999999999999999999986650                


Q ss_pred             --------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHH
Q 036362          133 --------------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISI  168 (246)
Q Consensus       133 --------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~  168 (246)
                                                                  ....+|+||+||++++|++|++||.+.+...++..+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  243 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI  243 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                                                        011245999999999999999999999999999999


Q ss_pred             HHhhCCCCcCcCCCCCCcccc--cccc-------CCCCc---ch------hhhhCCCCChHHHHHHHHhhhcCCCCCCCH
Q 036362          169 FRLMGEPSEETLPGVTTFFPF--IYCY-------EESEP---KD------LAILLPDLEPAGVDLLQKMLRVNPKERITV  230 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~---~~------~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~  230 (246)
                      ...++.|..+.+.........  ....       .....   ..      .......+++++.+|+++||+.||.+|||+
T Consensus       244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~  323 (388)
T 3oz6_A          244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA  323 (388)
T ss_dssp             HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence            999999887655443322100  0000       00000   00      001123689999999999999999999999


Q ss_pred             HHHhcCCCCcCC
Q 036362          231 NDALNHHYYRDV  242 (246)
Q Consensus       231 ~e~l~h~~~~~~  242 (246)
                      +|+|+||||+.+
T Consensus       324 ~e~l~Hp~~~~~  335 (388)
T 3oz6_A          324 NDALKHPFVSIF  335 (388)
T ss_dssp             HHHTTSTTTTTT
T ss_pred             HHHhCCHHHHHh
Confidence            999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=8.2e-44  Score=287.04  Aligned_cols=210  Identities=18%  Similarity=0.268  Sum_probs=173.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|+... +  ++.||+|+..    ........+.+|+.+++.++||||+++    .+....
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~   81 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRH-N--GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   81 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence            4789999999999999999999987 5  7889999821    123455678889999999999999998    667899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      ++||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++            
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-~~kL~Dfg~a~~~~~~~  160 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG-HIKITDFGFAKYVPDVT  160 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS-CEEECCCSSCEECSSCB
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC-CEEEeecCcceecCCcc
Confidence            99999999999999997642   222333445999999999999999999999999998766 33443            


Q ss_pred             ------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          138 ------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       138 ------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                              |+||+||++++|++|..||.+.+.......+...  ..                  
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~------------------  220 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--EL------------------  220 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CC------------------
T ss_pred             ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC------------------
Confidence                                    4999999999999999999887776666655541  00                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                               ..++.+++++.+|+++||..||++||     +++|+++||||+++.
T Consensus       221 ---------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          221 ---------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             ---------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence                     01146789999999999999999999     999999999999863

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.6e-44  Score=297.84  Aligned_cols=214  Identities=18%  Similarity=0.245  Sum_probs=174.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|+++++||+|+||+||+|++.. +  ++.||+|+.    .........+.+|+.+++.++||||+++    .+.+..|
T Consensus        69 ~~y~~~~~LG~G~fG~V~~~~~~~-~--~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           69 EDYEVVKVIGRGAFGEVQLVRHKS-T--RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cccEEEEEEEcCCCEEEEEEEECC-C--CcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            689999999999999999999987 6  778899972    2234456678899999999999999998    6778999


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------------  131 (246)
                      +||||++|++|.+++.+..  +.....+..||+.||.|||++||+||||||+|||++.++                    
T Consensus       146 lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  225 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR  225 (410)
T ss_dssp             EEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred             EEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence            9999999999999987632  223334455999999999999999999999999998776                    


Q ss_pred             ----------C-------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          132 ----------Y-------------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       132 ----------~-------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                .             ....+|+||+||++++|++|..||.+.+.......+........            
T Consensus       226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~------------  293 (410)
T 3v8s_A          226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT------------  293 (410)
T ss_dssp             CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC------------
T ss_pred             ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccccc------------
Confidence                      0             12345799999999999999999998887777666655211000            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~~  243 (246)
                          ++         ....+++++++||++||+.+|.+  ||+++|+++||||++++
T Consensus       294 ----~p---------~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          294 ----FP---------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             ----CC---------TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             ----CC---------CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence                00         01468999999999999999998  99999999999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=5.1e-44  Score=299.32  Aligned_cols=239  Identities=24%  Similarity=0.332  Sum_probs=180.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC------CCCceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM------DYPLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l------~~~~i~~~----~~~~~   71 (246)
                      ++|++++.||+|+||+||+|.+.. +  ++.||+|+..........+.+|+.+++.+      +|+||+++    ...+.
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~-~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHK-V--HQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETT-T--TEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             CcEEEEEEcccCccEEEEEEEECC-C--CcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            479999999999999999999987 6  78899998443333345677788877776      57799887    55789


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-eeeEEE-------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-TVKIAR-------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-~~~~~D-------  138 (246)
                      .++||||++ ++|.+++.......+.     .++.||+.||.|||++||+||||||+|||++.++. ..+++|       
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            999999998 7999998765433333     34449999999999999999999999999997762 256666       


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +|||||++++|++|.+||.+.+..+++..+.+..+.|...++........+
T Consensus       253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~  332 (429)
T 3kvw_A          253 HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF  332 (429)
T ss_dssp             TCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHH
T ss_pred             CCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhc
Confidence                                         999999999999999999999999999999999998876643322111111


Q ss_pred             ccc-----------------------------cCCCCcchh-hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          190 IYC-----------------------------YEESEPKDL-AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       190 ~~~-----------------------------~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ...                             ........+ .......++.+.+||++||+.||++|||+.|+|+||||
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~  412 (429)
T 3kvw_A          333 VSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL  412 (429)
T ss_dssp             BCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTT
T ss_pred             cCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhh
Confidence            000                             000000111 11223458899999999999999999999999999999


Q ss_pred             cCCCC
Q 036362          240 RDVVS  244 (246)
Q Consensus       240 ~~~~~  244 (246)
                      ++..+
T Consensus       413 ~~~~~  417 (429)
T 3kvw_A          413 RRRLP  417 (429)
T ss_dssp             C----
T ss_pred             ccCCC
Confidence            98643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.1e-43  Score=291.08  Aligned_cols=213  Identities=20%  Similarity=0.224  Sum_probs=167.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+..........+.+|+.+++.++||||+++    ...+..++|||
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           20 DRYDFVKDIGSGNFGVARLMRDKL-T--KELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             TTEEEEEEESSSTTSSEEEEEETT-T--CCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CcEEEEEEeccCCCEEEEEEEECC-C--CcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            689999999999999999999987 5  7889999855555566789999999999999999998    56788999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC-eeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY-TVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~-~~~~-----------------  136 (246)
                      |+++++|.+++....   ......+..|++.||.|||++||+||||||+|||++.++. ..++                 
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~  176 (361)
T 3uc3_A           97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS  176 (361)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCC
Confidence            999999999986532   2233344459999999999999999999999999986541 1333                 


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh-hCCCCcCcCCCCCCcccccccc
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRL-MGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                            +|+||+||++++|++|+.||.+............. ......               .
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------~  241 (361)
T 3uc3_A          177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS---------------I  241 (361)
T ss_dssp             ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCC---------------C
T ss_pred             CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCC---------------C
Confidence                                  45999999999999999999875543322222221 111000               0


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      +         ....+++++.+|+.+||..||.+|||+.|+++||||..
T Consensus       242 ~---------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          242 P---------DDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             C---------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred             C---------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence            0         01357899999999999999999999999999999955

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1e-42  Score=281.60  Aligned_cols=238  Identities=28%  Similarity=0.481  Sum_probs=189.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccC---CCCceEEe----c----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEM---DYPLIFRK----E----   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l---~~~~i~~~----~----   67 (246)
                      ++|++.+.||+|+||.||+|++..++  ++.||+|..   .........+.+|+.+++.+   +||||+++    .    
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTT--TEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             hceeeeeeecccccEEEEEEEecCCC--CEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            57999999999999999999985325  778899982   22333455777888888777   89999987    1    


Q ss_pred             -CCceEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----
Q 036362           68 -NDKLVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----  136 (246)
Q Consensus        68 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----  136 (246)
                       .....++||||++ ++|.+++.......+..     +..|++.||.|||++||+||||||+||+++.++ ..++     
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~-~~kl~Dfg~  166 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGL  166 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEECSCCS
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC-CEEEecCcc
Confidence             4578999999999 79999997654333333     334999999999999999999999999998766 3333     


Q ss_pred             ---------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          137 ---------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       137 ---------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                       +|+||+||++++|++|..||.+.........+....+.+....|+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (326)
T 1blx_A          167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  246 (326)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccc
Confidence                                             45999999999999999999999888888899998898887777654


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                      ...+..  .+............+.+++.+++|+.+||..||.+|||+.|+++||||+++..+
T Consensus       247 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          247 VALPRQ--AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             CSSCGG--GSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cccchh--hhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence            433322  122222333445567899999999999999999999999999999999987543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=6.9e-44  Score=295.26  Aligned_cols=239  Identities=14%  Similarity=0.144  Sum_probs=166.5

Q ss_pred             CCccceeeeCCc--cceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRG--KYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G--~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      ++|++++.||+|  +||.||+|++.. +  ++.||+|+..   ........+.+|+.+++.++||||+++    ...+..
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  101 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKP-T--GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL  101 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETT-T--CCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcC-C--CCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence            589999999999  999999999987 5  7889999832   122334677889999999999999998    567789


Q ss_pred             EEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ++||||+++++|.+++.......+.     .++.||+.||.|||++||+||||||+|||++.++                
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~  181 (389)
T 3gni_B          102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH  181 (389)
T ss_dssp             EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred             EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence            9999999999999999764323333     3344999999999999999999999999998655                


Q ss_pred             --------------------C-----------eeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh--------
Q 036362          132 --------------------Y-----------TVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM--------  172 (246)
Q Consensus       132 --------------------~-----------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~--------  172 (246)
                                          .           ....+|+||+||++++|++|+.||.+.+.......+....        
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  261 (389)
T 3gni_B          182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS  261 (389)
T ss_dssp             TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred             cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence                                0           1123469999999999999999998766655443322210        


Q ss_pred             CCCCcCcCCCCCCc---------cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          173 GEPSEETLPGVTTF---------FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       173 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ..+...........         .......+.............+++++.+|+++||+.||++|||+.|+|+||||+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            00000000000000         000000000011111223456899999999999999999999999999999999864

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=5.1e-44  Score=289.75  Aligned_cols=238  Identities=20%  Similarity=0.313  Sum_probs=177.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CCceEEe----c--CCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YPLIFRK----E--NDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~--~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..  ......+.+|+.+++.++ ||||+++    .  .....++
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~--~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l  110 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINIT-N--NEKVVVKILK--PVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  110 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEC--SCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECC-C--CcEEEEEEec--ccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence            579999999999999999999877 5  7889999832  345678999999999997 9999988    2  3678999


Q ss_pred             EEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      ||||+++++|.+++...+......++.||+.||.|||++||+||||||+|||++.++...+++|                
T Consensus       111 v~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  190 (330)
T 3nsz_A          111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR  190 (330)
T ss_dssp             EEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSC
T ss_pred             EEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccc
Confidence            9999999999999987666666666779999999999999999999999999997764555555                


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCC-CcchHHHHHHHHhhCCCCcCcCC---CCCCcccccc
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSED-ASESRERISIFRLMGEPSEETLP---GVTTFFPFIY  191 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  191 (246)
                                             +||+||++++|++|..||.. .....+...+....+.+....+.   .....+.+..
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (330)
T 3nsz_A          191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND  270 (330)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHH
T ss_pred             cccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhh
Confidence                                   99999999999999999854 44445555555544432211000   0000000000


Q ss_pred             ccCCCCcchhh-----hhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          192 CYEESEPKDLA-----ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       192 ~~~~~~~~~~~-----~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      .........+.     .....+++++.+|+.+||+.||.+|||++|+|+||||+++..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          271 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             HHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             hhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            00000001111     112347899999999999999999999999999999998753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.8e-43  Score=288.57  Aligned_cols=209  Identities=17%  Similarity=0.281  Sum_probs=173.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++++.||+|+||.||+|++.. +  ++.||+|+.    .........+.+|+.+++.++||||+++    .+....
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  116 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKE-S--GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL  116 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECC-C--CCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            4689999999999999999999987 5  788999982    1233455678899999999999999988    567899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      |+||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++            
T Consensus       117 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-~~kL~DFg~a~~~~~~~  195 (350)
T 1rdq_E          117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-YIQVTDFGFAKRVKGRT  195 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECSSCB
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC-CEEEcccccceeccCCc
Confidence            99999999999999997642   223333455999999999999999999999999998766 34444            


Q ss_pred             ------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          138 ------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       138 ------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                              |+||+||++++|++|..||.+.+.......+...  ...                 
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~-----------------  256 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVR-----------------  256 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC-----------------
T ss_pred             ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC--CCC-----------------
Confidence                                    4999999999999999999987776666655541  100                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDV  242 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~  242 (246)
                                .+..+++++.+|+.+||+.||.+||+     ++|+++||||+++
T Consensus       257 ----------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          257 ----------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             ----------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             ----------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence                      12467899999999999999999998     9999999999975

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=7.4e-44  Score=298.93  Aligned_cols=212  Identities=22%  Similarity=0.239  Sum_probs=168.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.+|+|.....   ......+.+|+.+++.++||||+++    .+.+..++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~-~--~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVL-A--GQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETT-T--TEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECC-C--CcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            579999999999999999999987 5  778888873222   1234568899999999999999998    67789999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC--CCeeeEE------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIA------------  137 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~--~~~~~~~------------  137 (246)
                      ||||++|++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.+  +...+++            
T Consensus        88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            999999999999986532   22333445599999999999999999999999999853  2233343            


Q ss_pred             ---------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          138 ---------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 |+||+||++++|++|.+||.+.+.......+.......+.             
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------  234 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS-------------  234 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT-------------
T ss_pred             ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCc-------------
Confidence                                       4999999999999999999988777666665552111110             


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                  ..++.+++++.+|+.+||+.||.+|||+.|+|+||||++
T Consensus       235 ------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          235 ------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             ------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             ------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence                        112568999999999999999999999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.1e-43  Score=296.52  Aligned_cols=231  Identities=19%  Similarity=0.391  Sum_probs=178.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----------cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----------ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~~~~~   72 (246)
                      +|++.+.||+|+||.||+|++.. +  ++.||+|....   ......+|+.+++.++||||+++          .+....
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~-~--~~~vaiK~~~~---~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCD-S--GELVAIKKVLQ---DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEC---CTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECC-C--CcEEEEEEecc---cchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            69999999999999999999987 5  78899998322   22345689999999999999987          122357


Q ss_pred             EEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------  138 (246)
                      ++||||++ ++|.+.+....  ...+     ..++.||+.||.|||++||+||||||+|||++.++...+++|       
T Consensus       129 ~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          129 NLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             Eeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            79999999 67777765321  1222     234449999999999999999999999999997664555655       


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC-
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT-  185 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  185 (246)
                                                      +||+||++++|++|+.||.+.+..+++..+...+|.|..+.+..... 
T Consensus       208 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             CTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             ccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence                                            99999999999999999999998899999999999887654332111 


Q ss_pred             ccccccccCCCCcchhhh-hCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          186 FFPFIYCYEESEPKDLAI-LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      +..+  .++......+.. ..+..++++.+||++||..||.+|||+.|+++||||+++
T Consensus       288 ~~~~--~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          288 YTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             CCCC--CCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhhh--ccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence            0000  112222222222 235689999999999999999999999999999999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=4.2e-43  Score=286.80  Aligned_cols=238  Identities=26%  Similarity=0.421  Sum_probs=183.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cC-----
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----EN-----   68 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~-----   68 (246)
                      +++|++++.||+|+||.||+|++.. +  ++.||+|+.   .........+.+|+.+++.++||||+++    ..     
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRK-T--GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETT-T--CCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             ccceeEEEEEecCCCcEEEEEEECC-C--CCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            3689999999999999999999977 5  788999972   2233345578899999999999999987    11     


Q ss_pred             ---CceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----
Q 036362           69 ---DKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----  136 (246)
Q Consensus        69 ---~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----  136 (246)
                         .+..++||||++ ++|.+.+....    ......++.||+.||.|||++||+||||||+|||++.++ ..++     
T Consensus        93 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~  170 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGL  170 (351)
T ss_dssp             ----CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTT
T ss_pred             ccCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC-CEEEccchh
Confidence               467899999999 68887775532    222333444999999999999999999999999998665 2222     


Q ss_pred             ---------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          137 ---------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       137 ---------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                             +|+||+||++++|++|.+||.+.........+....+.+.+
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  250 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  250 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence                                                   45999999999999999999999998999999999999888


Q ss_pred             CcCCCCCCcccccccc-CCCCcchhhhhC--CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          178 ETLPGVTTFFPFIYCY-EESEPKDLAILL--PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ..++.......+.... ............  ...++.+.+|+.+||+.||++|||++|+|+||||++.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence            8777655443221110 000000010000  12478899999999999999999999999999998754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3.6e-43  Score=290.41  Aligned_cols=210  Identities=17%  Similarity=0.245  Sum_probs=165.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      +++|+++++||+|+||+||+|++.. +  ++.||+|+.    .........+.+|..++..+ +||||+++    ...+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~-~--~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKK-T--DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            4689999999999999999999987 6  778899882    22334456788999999887 89999998    66789


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      .++||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++|          
T Consensus       128 ~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCCCCT
T ss_pred             EEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCC-CEEEeecceeeecccC
Confidence            999999999999999987642   233344455999999999999999999999999999776 344444          


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcch---------HHHHHHHHhhCCCCcCcC
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASES---------RERISIFRLMGEPSEETL  180 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~  180 (246)
                                                   +||+||++++|++|..||......         .....+..  +.      
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~------  278 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQ------  278 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CC------
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cc------
Confidence                                         999999999999999999643211         11112221  00      


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH------HHHhcCCCCcCCC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV------NDALNHHYYRDVV  243 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~------~e~l~h~~~~~~~  243 (246)
                                           ...++.+++++++||++||+.||.+||++      +|+++||||++++
T Consensus       279 ---------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~  326 (396)
T 4dc2_A          279 ---------------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  326 (396)
T ss_dssp             ---------------------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred             ---------------------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence                                 01124688999999999999999999995      7999999999873

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=9.4e-44  Score=289.51  Aligned_cols=210  Identities=22%  Similarity=0.261  Sum_probs=172.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      +++|++.+.||+|+||.||+|+++. +  ++.||+|+..    ........+.+|..++..+ +||||+++    .+.+.
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKK-T--NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETT-T--TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            4789999999999999999999987 6  7889999822    1234556788899999877 89999988    66789


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      .|+||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-~vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-HIKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCCCCT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC-CEEEeEChhhhhcccC
Confidence            999999999999999997632   223334455999999999999999999999999999776 33444           


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  |+||+||++++|++|..||.+.+.......+...  .+.             
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~-------------  236 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPF-------------  236 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC-------------
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCC-------------
Confidence                                        4999999999999999999987776665555441  110             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHH-HHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVN-DALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~-e~l~h~~~~~~~  243 (246)
                                    .+..+++++++|+.+||..||++|||+. ++++||||++++
T Consensus       237 --------------~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          237 --------------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             --------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             --------------CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence                          1135789999999999999999999998 999999999874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.3e-43  Score=284.31  Aligned_cols=212  Identities=21%  Similarity=0.266  Sum_probs=165.4

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +++|++.+.||+|+||+||+|.+.. +  ++.||+|+.  .........+.+|+.+++.++||||+++    ...+..++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   82 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRV-T--EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECC-C--CcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            4799999999999999999999987 5  778999983  2223345678999999999999999998    66788999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      ||||+++++|.+++....   ......+..||+.||.|||++||+||||||+|||++.++ ..+                
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCCTTCEECEETTEE
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC-CEEEEEeeccceeccCCcc
Confidence            999999999999986542   223334445999999999999999999999999998765 222                


Q ss_pred             --------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          136 --------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       136 --------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                .+|+||+||++++|++|..||...................              
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--------------  227 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------------  227 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------------
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------------
Confidence                                      2459999999999999999998765543222221110000              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  ...+..+++++.+|+.+||..||.+|||+.|+++||||++.
T Consensus       228 ------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          228 ------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             ------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ------------CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence                        00014578999999999999999999999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.7e-43  Score=285.23  Aligned_cols=214  Identities=20%  Similarity=0.210  Sum_probs=170.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-------CCcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-------GVPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..||+|......       .....+.+|+.+++.++||||+++    ....
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKS-T--GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETT-T--CCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cceEeceEEeeCCCeEEEEEEECC-C--CcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            469999999999999999999987 5  7789999822111       124568899999999999999988    6678


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---eeeEEE------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKIAR------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---~~~~~D------  138 (246)
                      ..++||||+++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++.   ..+++|      
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           88 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            8999999999999999997532   2233334449999999999999999999999999986541   344444      


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||++++|++|..||.+.........+.......           
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-----------  236 (326)
T 2y0a_A          168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-----------  236 (326)
T ss_dssp             CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC-----------
T ss_pred             CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc-----------
Confidence                                            9999999999999999998877666555554421100           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                    ....+..+++.+.+|+.+||..||.+|||+.|+|+||||++..
T Consensus       237 --------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          237 --------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             --------------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             --------------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence                          0112356789999999999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=4.4e-43  Score=286.39  Aligned_cols=210  Identities=17%  Similarity=0.206  Sum_probs=172.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      +++|++++.||+|+||+||+|++.. +  ++.||+|+..    ........+.+|..++..+ +||+|+++    ...+.
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   95 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKG-T--DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR   95 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT-E--EEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence            4789999999999999999999987 6  7889999822    1234556788999999988 79999988    56789


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      .|+||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        96 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCCCCT
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC-cEEEEeCCcccccccC
Confidence            999999999999999997642   223334455999999999999999999999999999776 34444           


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  |+|||||++++|++|..||.+.+.......+...  .+              
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~--------------  238 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NV--------------  238 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC--------------
T ss_pred             CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--CC--------------
Confidence                                        4999999999999999999988776666666551  10              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                   ..+..+++++++|+.+||..||.+||+     ++++++||||++++
T Consensus       239 -------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          239 -------------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred             -------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence                         011467899999999999999999994     69999999999763

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=4.3e-43  Score=289.69  Aligned_cols=214  Identities=18%  Similarity=0.225  Sum_probs=171.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-CCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.+|+|..... ......+.+|+.+++.++||||+++    ......++||
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKA-T--GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECC-C--CCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence            579999999999999999999987 5  778899983221 2234578899999999999999998    6678999999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEEE-------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIAR-------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~D-------------  138 (246)
                      ||+++++|.+++....    +.....++.||+.||.|||++||+||||||+|||++.++ ...+++|             
T Consensus       128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence            9999999999986532    222333444999999999999999999999999997532 2344444             


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               +||+||++++|++|..||.+.+.......+........                 
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~-----------------  270 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-----------------  270 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC-----------------
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-----------------
Confidence                                     99999999999999999998777666655554211100                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                              ...+..+++++.+|+.+||..||.+|||+.|+++||||++..
T Consensus       271 --------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          271 --------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             --------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             --------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence                    011246889999999999999999999999999999998753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.1e-43  Score=292.38  Aligned_cols=237  Identities=24%  Similarity=0.356  Sum_probs=189.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----cCCc----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----ENDK----   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~----   70 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|.....   ......+.+|+.+++.++||||+++    ....    
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKR-S--GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             ccEEEEeEEecCCCeEEEEEEECC-C--CCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            579999999999999999999987 6  788999983322   2224678899999999999999987    2222    


Q ss_pred             --eEEEEEeccCcccHHHHHhhh-cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------
Q 036362           71 --LVYQIFEYTGLLNLRKVIKNF-LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------  136 (246)
Q Consensus        71 --~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------  136 (246)
                        ..++||||++ ++|.+++... +......+..|++.||.|||++||+||||||+|||++.++ ..++           
T Consensus       119 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-~~kL~Dfg~a~~~~~  196 (371)
T 4exu_A          119 FYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-ELKILDFGLARHADA  196 (371)
T ss_dssp             CCCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECSTTCC-----
T ss_pred             ceeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCC-CEEEEecCccccccc
Confidence              3499999999 8998887542 2333344455999999999999999999999999999765 2333           


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc--cc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF--FP  188 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  188 (246)
                                                +|+||+||++++|++|..||.+.+..+....+....+.+..+.+......  ..
T Consensus       197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  276 (371)
T 4exu_A          197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS  276 (371)
T ss_dssp             ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred             CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence                                      45999999999999999999999988999999999998877765554332  11


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +...........+...++..++++.+|+.+||+.||.+|||+.|+|+||||+++.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence            2223333444455566678899999999999999999999999999999999764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.5e-43  Score=289.50  Aligned_cols=212  Identities=23%  Similarity=0.313  Sum_probs=165.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc------cCCCCCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD------IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~------~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+.      .........+.+|+.+++.++||||+++    ...+.
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRE-T--GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECC-C--CCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            469999999999999999999987 5  788999972      1122245678999999999999999998    56788


Q ss_pred             EEEEEeccCcccHHHHHhhhc-------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eeeEE-----
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL-------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVKIA-----  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~~~-----  137 (246)
                      .++||||++|++|.+++....       +.....++.||+.||.|||++||+||||||+|||++.++.  ..+++     
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            999999999999988875432       1222334449999999999999999999999999976541  13443     


Q ss_pred             ----------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          138 ----------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       138 ----------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                        |+||+||++++|++|..||.+... .....+.......        
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~--------  251 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKM--------  251 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCC--------
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCC--------
Confidence                                              499999999999999999987542 2333333210000        


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                       ....+..+++++++|+.+||..||++|||+.|+++||||++.
T Consensus       252 -----------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          252 -----------------NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             -----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             -----------------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence                             011225688999999999999999999999999999999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.1e-43  Score=291.02  Aligned_cols=235  Identities=17%  Similarity=0.191  Sum_probs=175.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~----~~~~~~   72 (246)
                      ++|++.++||+|+||.||+|++.. +  ++.||+|+.............|+.+++.+.     ||||+++    ...+..
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~  111 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHID-N--KKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM  111 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECC-C--CeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence            589999999999999999999977 5  788999985433444566778999998886     9999998    556789


Q ss_pred             EEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEec------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINL------------------  129 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~------------------  129 (246)
                      ++||||+ +++|.+++.......+.     .+..||+.||.|||++||+||||||+|||++.                  
T Consensus       112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~  190 (360)
T 3llt_A          112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK  190 (360)
T ss_dssp             EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccc
Confidence            9999999 69999999765433333     33449999999999999999999999999974                  


Q ss_pred             ------CCCeeeEE------------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHH
Q 036362          130 ------SDYTVKIA------------------------------------RLISVGCIFAEMVIQEPLSEDASESRERIS  167 (246)
Q Consensus       130 ------~~~~~~~~------------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~  167 (246)
                            .....+++                                    |+||+||++++|++|+.||...........
T Consensus       191 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~  270 (360)
T 3llt_A          191 IQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAM  270 (360)
T ss_dssp             EEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHH
Confidence                  12234444                                    499999999999999999999888888888


Q ss_pred             HHHhhCCCCcCcCCCCCCcc--cc------ccccCCCCcc--h-------hhhhCCCCChHHHHHHHHhhhcCCCCCCCH
Q 036362          168 IFRLMGEPSEETLPGVTTFF--PF------IYCYEESEPK--D-------LAILLPDLEPAGVDLLQKMLRVNPKERITV  230 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~--~-------~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~  230 (246)
                      +....+.++...........  .+      ....+.....  .       ........++.+.+|+.+||+.||++|||+
T Consensus       271 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta  350 (360)
T 3llt_A          271 MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSP  350 (360)
T ss_dssp             HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCH
Confidence            88877766543221111000  00      0000000000  0       000111245788999999999999999999


Q ss_pred             HHHhcCCCCc
Q 036362          231 NDALNHHYYR  240 (246)
Q Consensus       231 ~e~l~h~~~~  240 (246)
                      .|+|+||||+
T Consensus       351 ~elL~hp~f~  360 (360)
T 3llt_A          351 AELLKHKFLE  360 (360)
T ss_dssp             HHHTTSGGGC
T ss_pred             HHHhcCcccC
Confidence            9999999996

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=7.2e-43  Score=293.94  Aligned_cols=209  Identities=18%  Similarity=0.261  Sum_probs=162.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||.||+|++.. +  ++.||+|+..    ........+.+|+.+++.++||||+++    ...+..+
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKA-T--GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcC-C--CCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            679999999999999999999987 6  7889999821    234455678899999999999999988    5667899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      +||||+++++|.+++....   ......+..||+.||.|||+ +||+||||||+|||++.++ ..+++|           
T Consensus       225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS-CEEECCCCCCCTTCC--
T ss_pred             EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC-CEEEccCCCceeccCCC
Confidence            9999999999999987643   22333344599999999998 9999999999999999766 344444           


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  +||+||++++|++|..||.+.+.......+...  ..               
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~---------------  366 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EI---------------  366 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC---------------
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--CC---------------
Confidence                                        999999999999999999887766655555441  00               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                  ..++.+++++.+||.+||..||.+||     |++|+++||||++++
T Consensus       367 ------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~  412 (446)
T 4ejn_A          367 ------------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV  412 (446)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             ------------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCC
Confidence                        01246789999999999999999999     999999999999863

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.8e-43  Score=292.27  Aligned_cols=238  Identities=25%  Similarity=0.385  Sum_probs=173.2

Q ss_pred             Cccc-eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe------cCCceEEEE
Q 036362            3 KYRK-VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i-~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~lv   75 (246)
                      .|++ .++||+|+||.||+|++.. ...++.||+|... .......+.+|+.+++.++||||+++      ......++|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~-~~~~~~vaiK~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKD-GKDDKDYALKQIE-GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESS-SSCCCCEEEEECS-SSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEcc-CCCCeEEEEEEEC-CCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            4666 4589999999999999764 2237789999843 23445678999999999999999987      346789999


Q ss_pred             EeccCcccHHHHHhhhc------------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC---CCeeeE----
Q 036362           76 FEYTGLLNLRKVIKNFL------------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS---DYTVKI----  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~------------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~---~~~~~~----  136 (246)
                      |||++ ++|.+++....            ...+..++.||+.||.|||++||+||||||+|||+..+   ....++    
T Consensus        99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A           99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence            99999 79988885321            11223344499999999999999999999999999322   112333    


Q ss_pred             ---------------------------------------EEeehhhHHHHHHhhCCCCCCCCcc---------hHHHHHH
Q 036362          137 ---------------------------------------ARLISVGCIFAEMVIQEPLSEDASE---------SRERISI  168 (246)
Q Consensus       137 ---------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~  168 (246)
                                                             +|+||+||++++|++|.+||.+...         ..++..+
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i  257 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI  257 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence                                                   4499999999999999999976544         4688889


Q ss_pred             HHhhCCCCcCcCCCCCCcccccccc--------CCCCcc-hhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          169 FRLMGEPSEETLPGVTTFFPFIYCY--------EESEPK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ...+|.|....|......+......        ...... .........++.+.+||++||..||.+|||++|+|+||||
T Consensus       258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f  337 (405)
T 3rgf_A          258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  337 (405)
T ss_dssp             HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence            9999999988877655443221110        000000 0111223458899999999999999999999999999999


Q ss_pred             cCCC
Q 036362          240 RDVV  243 (246)
Q Consensus       240 ~~~~  243 (246)
                      ++.+
T Consensus       338 ~~~~  341 (405)
T 3rgf_A          338 LEDP  341 (405)
T ss_dssp             TSSS
T ss_pred             ccCC
Confidence            8753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=5.9e-43  Score=278.11  Aligned_cols=211  Identities=22%  Similarity=0.277  Sum_probs=165.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..+|+|..  .........+.+|+.+++.++||||+++    ......++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   98 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERS-S--GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV   98 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEcc-C--CceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence            479999999999999999999977 5  778888882  2233345788999999999999999998    567889999


Q ss_pred             EeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeE----------
Q 036362           76 FEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKI----------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~----------  136 (246)
                      |||+++++|.+++....  ...+     ..+..|++.||.|||++||+||||||+||+++.++  ...++          
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            99999999999885431  1222     33444999999999999999999999999995432  12333          


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                 +|+||+||++++|++|..||.+.............  .+..            
T Consensus       179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~--~~~~------------  244 (285)
T 3is5_A          179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK--EPNY------------  244 (285)
T ss_dssp             --------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCC------------
T ss_pred             CcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC--Cccc------------
Confidence                                       35999999999999999999877655443333321  1100            


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                  .......++++.+|+.+||+.||++|||+.|+++||||++
T Consensus       245 ------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          245 ------------AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             ------------CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ------------ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                        0001347899999999999999999999999999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.1e-43  Score=289.93  Aligned_cols=233  Identities=20%  Similarity=0.397  Sum_probs=173.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~~~~   71 (246)
                      .+|++.+.||+|+||+||+|++.. +  +. +|+|....   ......+|+.+++.++||||+++          .....
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~-~--~~-~aikk~~~---~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVE-S--DE-VAIKKVLQ---DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT-T--EE-EEEEEEEC---CTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECC-C--Ce-EEEEEEec---CcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence            369999999999999999999977 3  33 67776322   22344579999999999999987          12335


Q ss_pred             EEEEEeccCcccHHHHHhhh--ccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------
Q 036362           72 VYQIFEYTGLLNLRKVIKNF--LDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~--~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------  138 (246)
                      .++||||++ +++.+.+...  ....+     ..++.||+.||.|||++||+||||||+|||++......+++|      
T Consensus       113 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          113 LNLVLEYVP-ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEeeccC-ccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            889999999 5555444321  11222     334449999999999999999999999999994332444444      


Q ss_pred             ---------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          139 ---------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       139 ---------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                       +||+||++++|++|+.||.+.+..+++..+...+|.|..+.+.....
T Consensus       192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~  271 (394)
T 4e7w_A          192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP  271 (394)
T ss_dssp             CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred             ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence                                             99999999999999999999999999999999999887654332111


Q ss_pred             ccccccccCCCCcchhhhh-CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          186 FFPFIYCYEESEPKDLAIL-LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .. ....++......+... .+..++++.+|+.+||+.||.+|||+.|+++||||+++.
T Consensus       272 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          272 NY-MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             GG-SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             hh-hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence            00 0011222222223332 345899999999999999999999999999999999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=9.2e-43  Score=284.83  Aligned_cols=237  Identities=26%  Similarity=0.378  Sum_probs=185.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----c-----CCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----E-----NDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~-----~~~   70 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....  .......+.+|+.+++.++||||+++    .     ...
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKP-T--GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             cceEEeeEEcCCCCeEEEEEEECC-C--CcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            589999999999999999999987 5  77899998322  12224467799999999999999987    1     236


Q ss_pred             eEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------  135 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------  135 (246)
                      ..++||||++ ++|.+++....  ......+..|++.||.|||++||+||||||+|||++.++ ..+             
T Consensus        88 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~-~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           88 EVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDES  165 (353)
T ss_dssp             CEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-CEEECCCTTCEECC--
T ss_pred             eEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCC-cEEEEecccccccccc
Confidence            7999999999 79999987632  223333445999999999999999999999999998765 111             


Q ss_pred             -------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          136 -------------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       136 -------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                           .+|+||+||++++|++|..||.+.+...+...+....+.+...
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  245 (353)
T 2b9h_A          166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD  245 (353)
T ss_dssp             --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred             cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence                                                 2459999999999999999999998888888888888887654


Q ss_pred             cCCCCCCcc---ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          179 TLPGVTTFF---PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       179 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .........   .+....+..........++.+++++.+|+.+||..||++|||+.|+++||||++..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            332221111   11122233334445556678999999999999999999999999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.2e-43  Score=289.44  Aligned_cols=212  Identities=21%  Similarity=0.264  Sum_probs=169.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..||+|+.....   .....+.+|+.+++.++||||+++    ...+..++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKT-T--GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECC-C--CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            469999999999999999999987 5  7889999832222   223568899999999999999998    66788999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEE------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIA------------  137 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~------------  137 (246)
                      ||||++|++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.++  ...+++            
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            999999999999986532   223334455999999999999999999999999998643  124444            


Q ss_pred             --------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          138 --------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       138 --------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                |+||+||++++|++|..||.+.+.......+.......+               
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~---------------  250 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP---------------  250 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---------------
T ss_pred             ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC---------------
Confidence                                      499999999999999999988776665555544211100               


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                ...+..+++++.+|+.+||..||.+|||+.|+|+||||.+
T Consensus       251 ----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          251 ----------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             ----------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             ----------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence                      0012467899999999999999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=8.2e-43  Score=297.06  Aligned_cols=213  Identities=20%  Similarity=0.326  Sum_probs=168.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++++.||+|+||+||+|++.. +  +..||+|+.   .........+.+|+.+++.++||||+++    ......++
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  113 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKV-T--HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL  113 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETT-T--CCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECC-C--CcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            369999999999999999999987 5  778899882   2223446788999999999999999998    66788999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEE------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIA------------  137 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~------------  137 (246)
                      ||||+++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++..+  ...+++            
T Consensus       114 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          114 VMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence            999999999999886542   223333455999999999999999999999999997543  123343            


Q ss_pred             -------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          138 -------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       138 -------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               |+||+||++++|++|.+||.+.........+.........               
T Consensus       194 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------  258 (494)
T 3lij_A          194 KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS---------------  258 (494)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS---------------
T ss_pred             cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---------------
Confidence                                     4999999999999999999988877666666552111110               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                ..++.+++++++|+++||+.||.+|||+.|+|+||||++.
T Consensus       259 ----------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          259 ----------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             ----------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             ----------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence                      1125789999999999999999999999999999999763

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.7e-43  Score=293.81  Aligned_cols=214  Identities=15%  Similarity=0.232  Sum_probs=173.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|+++++||+|+||+||+|+... +  ++.||+|+.    .........+.+|..++..++||||+++    .+.+..|
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~~-~--~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLKN-A--DKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             hheEEEEEEEeCCCEEEEEEEEcC-C--CcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            589999999999999999999987 6  778999982    1233445668899999999999999998    6778999


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------------  135 (246)
                      +||||++|++|.+++.+..    +.....++.||+.||.|||++||+||||||+|||++.++ ..+              
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g-~vkL~DFGla~~~~~~~  229 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG-HIRLADFGSCLKLMEDG  229 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECCTTS
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCC-CEEEcchhhhhhcccCC
Confidence            9999999999999997632    223333455999999999999999999999999998766 222              


Q ss_pred             -------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          136 -------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       136 -------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                     .+|+||+||++++|++|+.||.+.+..+.+..+........        
T Consensus       230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------  301 (437)
T 4aw2_A          230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ--------  301 (437)
T ss_dssp             CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC--------
T ss_pred             CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccccc--------
Confidence                                           24699999999999999999998887777666654211100        


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCC--CCCHHHHhcCCCCcCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKE--RITVNDALNHHYYRDVV  243 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~--R~s~~e~l~h~~~~~~~  243 (246)
                              ++        .....+++++++||++||..+|.+  |++++|+++||||++++
T Consensus       302 --------~p--------~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          302 --------FP--------TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             --------CC--------SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             --------CC--------cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence                    00        012468999999999999998888  99999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=8.7e-43  Score=284.08  Aligned_cols=210  Identities=17%  Similarity=0.237  Sum_probs=164.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      +++|++++.||+|+||.||+|+++. +  ++.||+|+....    ......+.+|..+++.+ +||||+++    ...+.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   84 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKK-T--DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR   84 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECC-C--CCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE
Confidence            4689999999999999999999987 6  788999983221    12234578899999887 89999998    56789


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      .|+||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        85 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-~~kL~DFG~a~~~~~~  163 (345)
T 3a8x_A           85 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRP  163 (345)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCGGGCBCSCCT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-CEEEEeccccccccCC
Confidence            999999999999999997642   223334445999999999999999999999999998766 33443           


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcc---------hHHHHHHHHhhCCCCcCcC
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASE---------SRERISIFRLMGEPSEETL  180 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~  180 (246)
                                                  |+||+||++++|++|..||.....         ......+..  +.      
T Consensus       164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~--~~------  235 (345)
T 3a8x_A          164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQ------  235 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--CC------
T ss_pred             CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--CC------
Confidence                                        499999999999999999965211         111112221  00      


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH------HHHhcCCCCcCCC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV------NDALNHHYYRDVV  243 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~------~e~l~h~~~~~~~  243 (246)
                                           ...+..+++++++|+.+||+.||.+|||+      .|+++||||++++
T Consensus       236 ---------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          236 ---------------------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             ---------------------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             ---------------------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence                                 00124678999999999999999999996      8999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.1e-42  Score=285.91  Aligned_cols=209  Identities=17%  Similarity=0.259  Sum_probs=162.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcc-cccCCCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISP-LKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~-l~~l~~~~i~~~----~~~~~~   72 (246)
                      ++|++++.||+|+||+||+|+++. +  ++.||+|+.    .........+.+|..+ ++.++||||+++    ...+..
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~-~--~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKA-E--EVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETT-T--CCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcC-C--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            689999999999999999999987 6  778899982    1223345566777776 577899999988    667899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      |+||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++            
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-HIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEECCCCBCGGGBCCC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-CEEEeeCccccccccCC
Confidence            99999999999999987642   223334455999999999999999999999999999776 33443            


Q ss_pred             ---------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          138 ---------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 |+|||||++++|++|..||.+.+.......+...  ..               
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~---------------  256 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PL---------------  256 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS--CC---------------
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--cc---------------
Confidence                                       4999999999999999999988776666666551  00               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH----HHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV----NDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~----~e~l~h~~~~~~~  243 (246)
                                  ...+.+++++++|+++||+.||.+||++    .++++||||++++
T Consensus       257 ------------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          257 ------------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             ------------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             ------------CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence                        0124678999999999999999999997    6999999999863

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=5.9e-43  Score=288.21  Aligned_cols=213  Identities=15%  Similarity=0.266  Sum_probs=168.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++++.||+|+||.||+|.+.. +  ++.||+|+.    .........+.+|+.+++.++||||+++    ...+..
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~-~--~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   90 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKND-T--KKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM   90 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            4689999999999999999999987 6  788999972    1233455678899999999999999988    667899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------------  135 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------------  135 (246)
                      ++||||+.|++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.++ ..+              
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-~vkL~DFG~a~~~~~~~  169 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG-HVHITDFNIAAMLPRET  169 (384)
T ss_dssp             EEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECCTTC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC-CEEEeccceeeeccCCC
Confidence            99999999999999997642   223334455999999999999999999999999998776 222              


Q ss_pred             ---------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          136 ---------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       136 ---------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 .+|+||+||++++|++|..||...................             
T Consensus       170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-------------  236 (384)
T 4fr4_A          170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-------------  236 (384)
T ss_dssp             CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-------------
T ss_pred             ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-------------
Confidence                                       2469999999999999999997543322111111110000             


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-HHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-VNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-~~e~l~h~~~~~~~  243 (246)
                                   ...+..+++++.+|+.+||+.||.+||+ ++++++||||++++
T Consensus       237 -------------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          237 -------------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             -------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             -------------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence                         0012467899999999999999999998 99999999999864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=8.3e-44  Score=293.03  Aligned_cols=236  Identities=22%  Similarity=0.269  Sum_probs=178.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cC------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----EN------   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~------   68 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....   .......+.+|+.+++.++||||+++    ..      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAI-L--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred             hheeEeeeeEecCCEEEEEEEECC-C--CceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence            689999999999999999999977 5  77899998322   12224567899999999999999987    11      


Q ss_pred             CceEEEEEeccCcccHHHHHhhh-cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNF-LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------  136 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------  136 (246)
                      ....++||||++ ++|.+++... +......++.||+.||.|||++||+||||||+|||++.++ ..++           
T Consensus       102 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~a~~~~~  179 (371)
T 2xrw_A          102 FQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGT  179 (371)
T ss_dssp             CCEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-CEEECCCCC------
T ss_pred             ccceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-CEEEEEeeccccccc
Confidence            247899999999 7888888632 2233344555999999999999999999999999999765 3333           


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc-c
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF-P  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  188 (246)
                                                 +|+||+||++++|++|..||.+.+...+...+.+..+.|.++.+....... .
T Consensus       180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  259 (371)
T 2xrw_A          180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT  259 (371)
T ss_dssp             ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred             ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence                                       349999999999999999999999888889999888888776554432110 0


Q ss_pred             cccccCCCCcchhhhhCC------------CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLP------------DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      +....+......+....+            ..++++++|+++||..||++|||++|+|+||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            001111111111111111            125789999999999999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.8e-42  Score=280.47  Aligned_cols=212  Identities=20%  Similarity=0.274  Sum_probs=165.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-----CCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|+.......++.||+|+...     .......+.+|+.+++.++||||+++    ...+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            689999999999999999999852112278899998322     22345667889999999999999987    567889


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      ++||||+++++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++ ..+++            
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG-HVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS-CEEECCCSCC-------
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC-cEEEEeCCcccccccCC
Confidence            99999999999999997642   222333445999999999999999999999999998766 33333            


Q ss_pred             ---------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          138 ---------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 |+||+||++++|++|..||.+.+.......+.....                 
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----------------  238 (327)
T 3a62_A          176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-----------------  238 (327)
T ss_dssp             ---CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----------------
T ss_pred             ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-----------------
Confidence                                       499999999999999999998777666655554210                 


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                  ..++.+++++.+|+.+||..||.+||     ++.|+++||||++++
T Consensus       239 ------------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          239 ------------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             ------------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence                        01145789999999999999999999     899999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.9e-43  Score=280.84  Aligned_cols=211  Identities=19%  Similarity=0.252  Sum_probs=161.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---------------------------CCcchhhhhhc
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---------------------------GVPISILTKIS   53 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---------------------------~~~~~~~~E~~   53 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|+.....                           .....+.+|+.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   88 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNEN-D--NTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA   88 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETT-T--TEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECC-C--CcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence            4789999999999999999999877 5  7889999822111                           12467889999


Q ss_pred             ccccCCCCceEEe----c--CCceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCe
Q 036362           54 PLKEMDYPLIFRK----E--NDKLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQA  125 (246)
Q Consensus        54 ~l~~l~~~~i~~~----~--~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Ni  125 (246)
                      +++.++||||+++    .  .....++||||+++++|.++....  +......+..||+.||.|||++||+||||||+||
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL  168 (298)
T ss_dssp             HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence            9999999999988    2  367899999999999998765432  1222333444999999999999999999999999


Q ss_pred             EEecCC-----------------------------Ce------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHH
Q 036362          126 LINLSD-----------------------------YT------------VKIARLISVGCIFAEMVIQEPLSEDASESRE  164 (246)
Q Consensus       126 l~~~~~-----------------------------~~------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~  164 (246)
                      |++.++                             .+            ...+|+||+||++++|++|..||........
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  248 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL  248 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHH
Confidence            998766                             00            1224799999999999999999987665444


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ...+...  ...                .+         ..+.+++++.+|+.+||..||.+|||+.|+++||||+.
T Consensus       249 ~~~~~~~--~~~----------------~~---------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          249 HSKIKSQ--ALE----------------FP---------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             HHHHHHC--CCC----------------CC---------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             HHHHhcc--cCC----------------CC---------CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence            4333331  000                00         01467899999999999999999999999999999963

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.4e-43  Score=285.26  Aligned_cols=208  Identities=21%  Similarity=0.283  Sum_probs=164.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|.+.. +  ++.||+|+.    .........+.+|+.+++.++||||+++    ...+..
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~   84 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYK-T--QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI   84 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            3789999999999999999999977 5  788999972    1223445688999999999999999998    667889


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      ++||||++ ++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++ ..++             
T Consensus        85 ~lv~E~~~-g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~-~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           85 VMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL-NVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EEEECCCC-EEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC-CEEECCSSCTBTTTTSB
T ss_pred             EEEEECCC-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC-CEEEEEeccceeccCCc
Confidence            99999995 89999886542   223333444999999999999999999999999999765 2333             


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+||++++|++|..||.+......               ....       
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~~i-------  220 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FKKV-------  220 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BCCC-------
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HHHH-------
Confidence                                      4599999999999999999975432110               0000       


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                             .......+..+++++.+|+++||..||.+|||++|+++||||+.-
T Consensus       221 -------~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          221 -------NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             -------CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             -------HcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence                   000011224678999999999999999999999999999999863

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=5.3e-43  Score=297.72  Aligned_cols=215  Identities=22%  Similarity=0.292  Sum_probs=173.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+.   .........+.+|+.+++.++||||+++    ......++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRI-T--QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETT-T--CCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECC-C--CCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            579999999999999999999987 5  788999982   2234456788999999999999999998    66789999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeE-------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKI-------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~-------------  136 (246)
                      ||||+.+++|.+.+....   +.....++.||+.||.|||++||+||||||+|||++..+  ...++             
T Consensus        99 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence            999999999999886542   223333445999999999999999999999999996432  12333             


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              +|+||+||++++|++|.+||.+.+.......+........                
T Consensus       179 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------------  242 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------------  242 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC----------------
T ss_pred             ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------------
Confidence                                    3599999999999999999998877766666555211100                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                               ...++.+++++++|+.+||..||.+|||+.|+|+||||++...
T Consensus       243 ---------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          243 ---------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             ---------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             ---------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence                     0012467899999999999999999999999999999987643

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4e-43  Score=278.18  Aligned_cols=211  Identities=23%  Similarity=0.362  Sum_probs=171.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..||+|+.    .........+.+|+.+++.++||||+++    ...+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   84 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQ-S--KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   84 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEcc-C--CcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence            4789999999999999999999987 5  778899972    1223345678899999999999999988    567889


Q ss_pred             EEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      ++||||+++++|.+++.....   .....+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~-~~~l~Dfg~~~~~~~~~  163 (279)
T 3fdn_A           85 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSR  163 (279)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS-CEEECSCCEESCC----
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC-CEEEEeccccccCCccc
Confidence            999999999999999876432   22233444999999999999999999999999998766 2333             


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              +|+||+|+++++|++|..||...........+......                  
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------  225 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------------------  225 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC------------------
T ss_pred             ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCC------------------
Confidence                                    45999999999999999999887766555555442100                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                 .+..+++++.+|+.+||..||.+|||+.|+++||||++...
T Consensus       226 -----------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          226 -----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             -----------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             -----------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence                       11457899999999999999999999999999999987544

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.8e-43  Score=285.08  Aligned_cols=238  Identities=26%  Similarity=0.360  Sum_probs=175.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe--------------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK--------------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~--------------   66 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|... ........+.+|+.+++.++||||+++              
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDND-C--DKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETT-T--TEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCeEEEEEEECC-C--CeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence            589999999999999999999987 5  7889999732 222334678899999999999999987              


Q ss_pred             ----cCCceEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE---
Q 036362           67 ----ENDKLVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA---  137 (246)
Q Consensus        67 ----~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~---  137 (246)
                          ......++||||++ ++|.+++.+..  ......+..|++.||.|||++||+||||||+||+++.++...+++   
T Consensus        88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg  166 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFG  166 (320)
T ss_dssp             ---CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred             cccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence                12468899999999 79999987532  222233444999999999999999999999999998554333443   


Q ss_pred             ----------------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          138 ----------------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       138 ----------------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                              |+|||||++++|++|+.||.+.........+......+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  246 (320)
T 2i6l_A          167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE  246 (320)
T ss_dssp             TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCH
T ss_pred             cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCch
Confidence                                                    4999999999999999999988887777777765544333


Q ss_pred             CcCCCCCC-ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          178 ETLPGVTT-FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       178 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ..+..... .+.+................+.+++++.+|+.+||+.||.+|||+.|+++||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            22211100 0111111111222334445578999999999999999999999999999999999764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.2e-42  Score=296.82  Aligned_cols=214  Identities=22%  Similarity=0.266  Sum_probs=170.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC--------------CCcchhhhhhcccccCCCCceEEe-
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--------------GVPISILTKISPLKEMDYPLIFRK-   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~i~~~-   66 (246)
                      ++|+++++||+|+||+||+|++.. +  +..||+|+.....              .....+.+|+.+++.++||||+++ 
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKN-G--HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETT-T--CCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cceEEEeEecccCCeEEEEEEECC-C--CcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            579999999999999999999987 5  7788999822211              335678899999999999999998 


Q ss_pred             ---cCCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eeeEE-
Q 036362           67 ---ENDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVKIA-  137 (246)
Q Consensus        67 ---~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~~~-  137 (246)
                         ......++||||++|++|.+++....   +.....+..||+.||.|||++||+||||||+|||++.++.  ..+++ 
T Consensus       113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          113 DVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence               67789999999999999999886542   2233334459999999999999999999999999986651  23444 


Q ss_pred             ------------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          138 ------------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       138 ------------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                          |+||+||++++|++|.+||.+.+.......+....-...     
T Consensus       193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-----  267 (504)
T 3q5i_A          193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD-----  267 (504)
T ss_dssp             CTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----
T ss_pred             CCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----
Confidence                                                499999999999999999998877766666655211000     


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                          ...++.+++++++|+++||+.||.+|||+.|+|+||||++..
T Consensus       268 --------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          268 --------------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             --------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             --------------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence                                111257899999999999999999999999999999998653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.6e-42  Score=284.42  Aligned_cols=236  Identities=22%  Similarity=0.320  Sum_probs=182.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC------------cchhhhhhcccccCCCCceEEe---
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV------------PISILTKISPLKEMDYPLIFRK---   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~E~~~l~~l~~~~i~~~---   66 (246)
                      ++|++.+.||+|+||.||+|.+..    +..||+|........            ...+.+|+.+++.++||||+++   
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   97 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSE----GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI   97 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTT----SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred             cceEEeEEeccCCCEEEEEEECCC----CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence            689999999999999999998865    778999972211111            1678899999999999999987   


Q ss_pred             ------cCCceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE
Q 036362           67 ------ENDKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI  136 (246)
Q Consensus        67 ------~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~  136 (246)
                            ......++||||++ ++|.+++....    ......+..||+.||.|||++||+||||||+||+++.++ ..++
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~-~~kl  175 (362)
T 3pg1_A           98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN-DITI  175 (362)
T ss_dssp             EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEE
T ss_pred             EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCC-CEEE
Confidence                  22347899999999 78988886532    122233444999999999999999999999999998665 3333


Q ss_pred             ---------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          137 ---------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       137 ---------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                             +|+||+||++++|++|..||.+.........+....+.+..
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  255 (362)
T 3pg1_A          176 CDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI  255 (362)
T ss_dssp             CCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             EecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence                                                   34999999999999999999999988899999988888765


Q ss_pred             CcCCCCCCc--ccc-ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          178 ETLPGVTTF--FPF-IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       178 ~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ..+......  ..+ ...........+....+..++.+.+|+.+||+.||.+|||+.|+++||||+++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            532211111  000 111222333344555678899999999999999999999999999999999873

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=6.5e-43  Score=299.44  Aligned_cols=213  Identities=17%  Similarity=0.269  Sum_probs=168.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+.    .........+.+|+.+++.++||||+++    .+.+..|
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~~-t--g~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVRA-T--GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            579999999999999999999987 5  788999982    1233455678899999999999999998    6678999


Q ss_pred             EEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      +||||++|++|.+++.......+.+     ++.||+.||.|||++||+||||||+|||++.++ ..+++|          
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g-~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG-HIRISDLGLAVHVPEG  339 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-CEEECCCTTCEECCTT
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCC-CeEEEecccceecccC
Confidence            9999999999999987643322333     344999999999999999999999999999766 344444          


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  +||+||++++|++|..||...........+.........             
T Consensus       340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-------------  406 (576)
T 2acx_A          340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-------------  406 (576)
T ss_dssp             CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-------------
T ss_pred             ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc-------------
Confidence                                        999999999999999999875432111111111100000             


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                  ..+..+++++++|+.+||+.||.+||     |++|+++||||++++
T Consensus       407 ------------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          407 ------------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             ------------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence                        01246789999999999999999999     899999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.3e-43  Score=285.44  Aligned_cols=215  Identities=20%  Similarity=0.235  Sum_probs=170.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc------CCCCCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI------IPDGVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~------~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+..      ........+.+|+.+++.++||||+++    ...+.
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQ-T--RAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hheeecceeeecCCeEEEEEEECC-C--CceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            479999999999999999999877 5  7788999721      234455788999999999999999998    66788


Q ss_pred             EEEEEeccCcccHHHHHhhhc-------------------------------------------ccccchHHHHHHHHHH
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL-------------------------------------------DIINNPKTAKILRVLS  108 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~-------------------------------------------~~~~~~~~~qil~~L~  108 (246)
                      .++||||+++++|.+++....                                           +..+..++.||+.||.
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            999999999999999985211                                           1112224459999999


Q ss_pred             HHhhCceeeccCCCCCeEEecCCC-eee---------------------------------------------EEEeehh
Q 036362          109 YYHSNRCLHGRLNPYQALINLSDY-TVK---------------------------------------------IARLISV  142 (246)
Q Consensus       109 ~lH~~~i~H~Dikp~Nil~~~~~~-~~~---------------------------------------------~~Di~sl  142 (246)
                      |||++||+||||||+||+++.++. ..+                                             .+|+|||
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            999999999999999999975541 222                                             2459999


Q ss_pred             hHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhc
Q 036362          143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRV  222 (246)
Q Consensus       143 G~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~  222 (246)
                      ||++++|++|..||.+....+....+........                         ......+++++.+|+.+||+.
T Consensus       263 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~  317 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE-------------------------NPNYNVLSPLARDLLSNLLNR  317 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT-------------------------SGGGGGSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC-------------------------CcccccCCHHHHHHHHHHcCC
Confidence            9999999999999998877766665555211100                         001135789999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCcCCCC
Q 036362          223 NPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       223 dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ||.+|||+.|+++||||+++..
T Consensus       318 ~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          318 NVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             CTTTSCCHHHHHHSHHHHTTSS
T ss_pred             ChhHCCCHHHHhcChhhccChH
Confidence            9999999999999999998753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.9e-42  Score=279.60  Aligned_cols=214  Identities=18%  Similarity=0.183  Sum_probs=171.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC-------CcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-------VPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|.......       ....+.+|+.+++.++||||+++    ...+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKS-T--GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccEEEeeEeeecCCEEEEEEEECC-C--CeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            469999999999999999999987 5  77899998221111       24568899999999999999988    6678


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---eeeEEE------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKIAR------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---~~~~~D------  138 (246)
                      ..++||||+++++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++.   ..+++|      
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            8999999999999999997532   2233334449999999999999999999999999986652   344444      


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||++++|++|..||.+.........+.......           
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-----------  237 (321)
T 2a2a_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF-----------  237 (321)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC-----------
T ss_pred             cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccccc-----------
Confidence                                            9999999999999999998877665555544421100           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                    ....+...++.+.+|+.+||..||.+|||+.|+++||||+++.
T Consensus       238 --------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          238 --------------DEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             --------------CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             --------------ChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence                          0112256789999999999999999999999999999998764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-42  Score=293.79  Aligned_cols=209  Identities=21%  Similarity=0.241  Sum_probs=171.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|+..    ........+.+|+.+++.++||||+++    ...+..
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~-~--g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~   91 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHEL-T--GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI   91 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETT-T--CCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3689999999999999999999987 5  7889999821    123345678999999999999999998    567889


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK--------------  135 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~--------------  135 (246)
                      ++||||++|++|.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++ ..+              
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~-~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC-CEEECCCSSCEECCTTC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC-CeEEEeccchhhccccc
Confidence            99999999999999997532   222333444999999999999999999999999998766 223              


Q ss_pred             -------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          136 -------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       136 -------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                               .+|+||+||++++|++|..||.+.........+......                
T Consensus       171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------  234 (476)
T 2y94_A          171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY----------------  234 (476)
T ss_dssp             CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCC----------------
T ss_pred             cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcC----------------
Confidence                                     345999999999999999999987766655555441100                


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                   .+..+++++.+|+++||..||.+|||+.|+++||||++.
T Consensus       235 -------------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          235 -------------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             -------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             -------------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                         013578999999999999999999999999999999863

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=4.3e-43  Score=286.97  Aligned_cols=237  Identities=24%  Similarity=0.344  Sum_probs=185.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCC-----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----END-----   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~-----   69 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|......   .....+.+|+.+++.++||||+++    ...     
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKR-S--GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             ceEEEeeeEecCCCeEEEEEEECC-C--CCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence            579999999999999999999977 5  7889999832221   224567889999999999999987    222     


Q ss_pred             -ceEEEEEeccCcccHHHHHhhh-cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------
Q 036362           70 -KLVYQIFEYTGLLNLRKVIKNF-LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------  136 (246)
Q Consensus        70 -~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------  136 (246)
                       ...++||||++ ++|.+++... +......+..||+.||.|||++||+||||||+||+++.++ ..++           
T Consensus       101 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~-~~kl~Dfg~~~~~~~  178 (353)
T 3coi_A          101 FYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC-ELKILDFGLARHADA  178 (353)
T ss_dssp             CCCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC-CEEECSTTCTTC---
T ss_pred             ceeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC-cEEEeecccccCCCC
Confidence             24599999999 7998877532 2233334455999999999999999999999999999765 2333           


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--c
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--P  188 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  188 (246)
                                                +|+||+||++++|++|..||.+.+..+....+....|.+..+++.......  .
T Consensus       179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  258 (353)
T 3coi_A          179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS  258 (353)
T ss_dssp             -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred             CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence                                      459999999999999999999988888888899988888776655543321  1


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +....+......+....+..++++.+|+.+||..||.+|||+.|+++||||+.+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence            1122222333334445567899999999999999999999999999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.7e-43  Score=287.00  Aligned_cols=238  Identities=23%  Similarity=0.343  Sum_probs=179.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---CcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|.......   ....+.+|+.+++.++||||+++    ...+..+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  100 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKD-T--GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWY  100 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETT-T--CCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECC-C--CceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEE
Confidence            4789999999999999999999987 5  78899998322222   23456789999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      +||||+++++|.++.....   ......+..|++.||.|||++||+||||||+||+++.++ ..++              
T Consensus       101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG-VVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEECCCTTC--------
T ss_pred             EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC-cEEEEeCCCceeecCCcc
Confidence            9999999888888765432   222333444999999999999999999999999998766 2233              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+||++++|++|..||...........+....+...+.........+.+.
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA  259 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence                                      459999999999999999999988888887777776665433211000000000


Q ss_pred             c-ccC-CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          191 Y-CYE-ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       191 ~-~~~-~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      . ..+ ...........+.+++.+.+|+.+||+.||.+|||+.|+|+||||+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            0 000 011122334456789999999999999999999999999999999863

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.5e-42  Score=294.90  Aligned_cols=214  Identities=22%  Similarity=0.309  Sum_probs=172.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..    ........+.+|+.+++.++||||+++    ...+..+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  102 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKI-T--GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY  102 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECC-C--CCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            479999999999999999999987 5  7889999822    223445678999999999999999998    6678999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC--CCeeeEE-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIA-----------  137 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~--~~~~~~~-----------  137 (246)
                      +||||+.+++|.+++....   +.....+..||+.||.|||++||+||||||+|||++..  ....+++           
T Consensus       103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence            9999999999999986532   22233344499999999999999999999999999532  2234444           


Q ss_pred             --------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          138 --------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       138 --------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                |+||+||++++|++|.+||.+.+.......+........               
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---------------  247 (484)
T 3nyv_A          183 KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE---------------  247 (484)
T ss_dssp             CSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---------------
T ss_pred             cccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---------------
Confidence                                      499999999999999999998887776666655211100               


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                ...+..+++++++|+++||+.||.+|||+.|+|+||||+...
T Consensus       248 ----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          248 ----------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             ----------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             ----------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence                      001246789999999999999999999999999999998643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.9e-42  Score=273.96  Aligned_cols=212  Identities=19%  Similarity=0.219  Sum_probs=169.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..+|+|. ..........+.+|+.+++.++||||+++    ...+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKG-T--RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCC-C--CcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            479999999999999999999987 5  66778887 33334456789999999999999999998    6678899999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEE---ecCCCeeeE--------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALI---NLSDYTVKI--------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~---~~~~~~~~~--------------  136 (246)
                      ||+++++|.+++....   ......+..|++.||.|||++||+||||||+||++   +.++ ..++              
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~-~~~l~Dfg~~~~~~~~~~  164 (277)
T 3f3z_A           86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDS-PLKLIDFGLAARFKPGKM  164 (277)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTC-CEEECCCTTCEECCTTSC
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCC-cEEEEecccceeccCccc
Confidence            9999999999886643   22233344499999999999999999999999999   4333 2333              


Q ss_pred             -----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                             +|+||+|+++++|++|..||...........+.......+                 
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------  227 (277)
T 3f3z_A          165 MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP-----------------  227 (277)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----------------
T ss_pred             hhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC-----------------
Confidence                                   4599999999999999999998777666555554211110                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                              ...+..+++++.+|+.+||+.||.+|||+.++++||||++.
T Consensus       228 --------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          228 --------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             --------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             --------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence                    01124678999999999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.3e-42  Score=273.48  Aligned_cols=214  Identities=21%  Similarity=0.251  Sum_probs=170.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..||+|+...   .......+.+|+.+++.++||||+++    ......++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKT-T--GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   82 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcC-C--CceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence            689999999999999999999987 5  77899998322   22234567889999999999999998    66778999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eeeE-------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVKI-------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~~-------------  136 (246)
                      ||||+++++|.+.+....   ......+..|++.||.|||++||+||||||+||+++.++.  ..++             
T Consensus        83 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (284)
T 3kk8_A           83 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  162 (284)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence            999999999998886542   2223334449999999999999999999999999975541  1333             


Q ss_pred             -------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          137 -------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       137 -------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                               +|+||+|+++++|++|..||.+.........+.......+.              
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------  228 (284)
T 3kk8_A          163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS--------------  228 (284)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT--------------
T ss_pred             cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCc--------------
Confidence                                     44999999999999999999887766655555442111100              


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                 ..+..+++++.+|+.+||+.||++|||+.|+++||||++..
T Consensus       229 -----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          229 -----------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             -----------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             -----------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence                       01246789999999999999999999999999999998854

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=5e-42  Score=280.14  Aligned_cols=213  Identities=21%  Similarity=0.216  Sum_probs=161.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+... ......+.+|+.+++.++||||+++    ...+..++|||
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~vavK~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKG-T--QKPYALKVLKK-TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECC-C--CcEEEEEEecc-chhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            469999999999999999999987 5  77899998332 2245678899999999999999998    56788999999


Q ss_pred             ccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC--CCeeeE----------------
Q 036362           78 YTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKI----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~--~~~~~~----------------  136 (246)
                      |+++++|.+++....   ......+..|++.||.|||++||+||||||+|||++..  +...++                
T Consensus       129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~  208 (349)
T 2w4o_A          129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK  208 (349)
T ss_dssp             CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence            999999999987532   22233344499999999999999999999999999741  223333                


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDASESR-ERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                            +|+|||||++++|++|..||....... ....+.......                  
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~------------------  270 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF------------------  270 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC------------------
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc------------------
Confidence                                  349999999999999999997665543 333333210000                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                             ....++.+++++.+|+++||..||++|||+.|+++||||++..
T Consensus       271 -------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          271 -------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             -------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             -------CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                   0011256889999999999999999999999999999998764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1e-42  Score=289.33  Aligned_cols=214  Identities=16%  Similarity=0.189  Sum_probs=170.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||+||+|+.+. +  ++.||+|+..    ........+.+|..++..++||||+++    .+.+..|
T Consensus        61 ~~f~~~~~lG~G~fG~V~~~~~~~-~--~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           61 DDFEILKVIGRGAFSEVAVVKMKQ-T--GQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             hhEEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            689999999999999999999987 5  7889999821    122345668899999999999999988    6678999


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +||||++|++|.+++.+..    +.....++.||+.||.|||++||+||||||+|||++.++                  
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~  217 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT  217 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence            9999999999999997642    222333455999999999999999999999999999766                  


Q ss_pred             ------------Ce----------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          132 ------------YT----------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       132 ------------~~----------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                  .+                ...+|+||+||++++|++|+.||.+.+....+..+........       
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~-------  290 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS-------  290 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC-------
T ss_pred             cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC-------
Confidence                        01                1235699999999999999999998877766666554210000       


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCC---CCHHHHhcCCCCcCCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKER---ITVNDALNHHYYRDVV  243 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R---~s~~e~l~h~~~~~~~  243 (246)
                               .        ......+++++++||++||. +|.+|   |+++|+++||||++++
T Consensus       291 ---------~--------p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          291 ---------L--------PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD  335 (412)
T ss_dssp             ---------C--------C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred             ---------C--------CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence                     0        00114689999999999999 99998   5999999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3.2e-42  Score=280.37  Aligned_cols=209  Identities=21%  Similarity=0.232  Sum_probs=162.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+....   .....+|+.++..+ +||||+++    .+.+..|+||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~~avK~~~~~---~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKA-T--NMEFAVKIIDKS---KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEETT---TCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECC-C--CCEEEEEEEEcc---cCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            479999999999999999999987 6  788999983322   23456788988888 79999998    6778999999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---CeeeEEE------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---YTVKIAR------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---~~~~~~D------------  138 (246)
                      ||++|++|.+++....   +.....++.||+.||.|||++||+||||||+|||+..++   ...+++|            
T Consensus        96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A           96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            9999999999986532   223334455999999999999999999999999985432   1244444            


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcc---hHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASE---SRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 +||+||++++|++|..||.....   ......+..  +...            
T Consensus       176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~--~~~~------------  241 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS--GKFS------------  241 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH--CCCC------------
T ss_pred             ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc--CCcc------------
Confidence                                       99999999999999999986422   222333322  1100            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                 .....++.+++++++|+++||..||++|||+.|+++||||.+
T Consensus       242 -----------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          242 -----------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             -----------CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             -----------cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence                       000113568999999999999999999999999999999975

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.7e-42  Score=282.77  Aligned_cols=238  Identities=24%  Similarity=0.364  Sum_probs=169.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----------cCC
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----------END   69 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----------~~~   69 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|.............+|+..+..++||||+++           ...
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKS-T--GMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HTTEEEC----------CEEEEETT-T--CCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            4789999999999999999999987 5  7889999855555556677888888899999999987           112


Q ss_pred             ceEEEEEeccCcccHHHHHhhh--ccccc-----chHHHHHHHHHHHHh--hCceeeccCCCCCeEEecCCCeeeEEE--
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNF--LDIIN-----NPKTAKILRVLSYYH--SNRCLHGRLNPYQALINLSDYTVKIAR--  138 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~-----~~~~~qil~~L~~lH--~~~i~H~Dikp~Nil~~~~~~~~~~~D--  138 (246)
                      ...++||||++ ++|.+.+...  ....+     ..+..|++.||.|||  ++||+||||||+|||++..+..++++|  
T Consensus        99 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A           99 IYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             eeEEEEeeccc-ccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence            34889999999 5665554331  11122     233449999999999  999999999999999996333444444  


Q ss_pred             -------------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          139 -------------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       139 -------------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                           +||+||++++|++|..||.+.+.......+.+..+.+..+.+.
T Consensus       178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  257 (360)
T 3e3p_A          178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR  257 (360)
T ss_dssp             TCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred             CceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHH
Confidence                                                 9999999999999999999999888999999988888765433


Q ss_pred             CCCCccccccccCCCCcchhhh----hCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAI----LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ......... .........+..    .....++++.+|+.+||+.||.+|||+.|+|+||||+++.
T Consensus       258 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          258 KLNPSHTDV-DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHCTTCCCG-GGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             hcccchhhc-cccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence            221110000 001111111111    2234678999999999999999999999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7.3e-42  Score=273.72  Aligned_cols=219  Identities=16%  Similarity=0.192  Sum_probs=151.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....  .......+.+|+.+++.++||||+++    ...+..++|
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAP-K--KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC-------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             hhhhhhheeccccceEEEEEEECC-C--CcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            689999999999999999999876 5  77899998322  23345678899999999999999987    556789999


Q ss_pred             EeccCcccHHHHHhhh-----------cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee---------
Q 036362           76 FEYTGLLNLRKVIKNF-----------LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK---------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~-----------~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~---------  135 (246)
                      |||+++++|.+++...           +......+..||+.||.|||++|++||||||+||+++.++ ..+         
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~kl~dfg~~~~  170 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVSAF  170 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC-CEEECCCHHHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCC-CEEEEeccchhe
Confidence            9999999999998642           1112223344999999999999999999999999998765 222         


Q ss_pred             ------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          136 ------------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       136 ------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                          .+|+||+||++++|++|..||...............  .+... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~-  247 (303)
T 2vwi_A          171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN--DPPSL-  247 (303)
T ss_dssp             CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS--SCCCT-
T ss_pred             eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc--CCCcc-
Confidence                                                245999999999999999999877665544333321  11100 


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...                .........+++++.+|+.+||..||.+|||+.|+++||||++..
T Consensus       248 ~~~----------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          248 ETG----------------VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             TC---------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             ccc----------------cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            000                001112356889999999999999999999999999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.5e-42  Score=277.36  Aligned_cols=220  Identities=11%  Similarity=0.061  Sum_probs=146.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----c---CCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----E---NDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~---~~~~~~   73 (246)
                      .+|.+.++||+|+||+||+|++.     ++.||||+.............|+..+..++||||+++     .   ....++
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-----g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~   77 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-----GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-----TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-----CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence            47899999999999999999873     5579999843332223334457778888999999998     1   123689


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhC--------ceeeccCCCCCeEEecCC------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSN--------RCLHGRLNPYQALINLSD------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~--------~i~H~Dikp~Nil~~~~~------------  131 (246)
                      +||||+++|||.+++.+..  ......+..|++.||.|||++        +|+||||||+|||++.++            
T Consensus        78 lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            9999999999999997643  112223444999999999987        999999999999999776            


Q ss_pred             ---------------------Ceee---------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCC
Q 036362          132 ---------------------YTVK---------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       132 ---------------------~~~~---------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                                           ++|+               .+|+|||||+++||++|.+||.......          .|
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~----------~p  227 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ----------LP  227 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC----------CT
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccc----------cc
Confidence                                 1222               2469999999999999988775432210          00


Q ss_pred             CcCcCCCCCCccccccccC-CCCcchhhhh--CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          176 SEETLPGVTTFFPFIYCYE-ESEPKDLAIL--LPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .....+............. ..........  ....++.+.+|+.+||+.||++|||+.|+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             chhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            0000000000000000000 0000000000  01234578899999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.1e-41  Score=275.12  Aligned_cols=209  Identities=18%  Similarity=0.247  Sum_probs=167.2

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEec
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEY   78 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~   78 (246)
                      |+..+.||+|+||.||+|+... +  ++.||+|+. .........+.+|+.+++.++||||+++    ...+..++||||
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~-~--g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKH-S--GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhccEEeccCCCeEEEEEEECC-C--CcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence            6778899999999999999976 5  788999983 3334445678899999999999999987    456789999999


Q ss_pred             cCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------------
Q 036362           79 TGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------------  136 (246)
Q Consensus        79 ~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------------  136 (246)
                      +++++|.+++.+..  ......+..|++.||.|||++||+||||||+||+++.++ ..++                    
T Consensus       124 ~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~  202 (321)
T 2c30_A          124 LQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDVPKRKSLV  202 (321)
T ss_dssp             CCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-CEEECCCTTCEECCSSSCCBCCCC
T ss_pred             CCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-cEEEeeeeeeeecccCcccccccc
Confidence            99999999987532  223333444999999999999999999999999999665 2333                    


Q ss_pred             -------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCC
Q 036362          137 -------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE  197 (246)
Q Consensus       137 -------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (246)
                                         +|+||+|+++++|++|+.||...........+...  .+.. .                  
T Consensus       203 gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~--~~~~-~------------------  261 (321)
T 2c30_A          203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--PPPK-L------------------  261 (321)
T ss_dssp             SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--SCCC-C------------------
T ss_pred             CCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCC-c------------------
Confidence                               45999999999999999999877665554444331  1000 0                  


Q ss_pred             cchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       198 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                           .....+++.+.+|+.+||..||++|||+.|+++||||.+.
T Consensus       262 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          262 -----KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             -----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             -----CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence                 0013578899999999999999999999999999999865

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=3e-42  Score=283.67  Aligned_cols=208  Identities=19%  Similarity=0.195  Sum_probs=161.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEeccCc
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFEYTGL   81 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e~~~~   81 (246)
                      .+.||+|+||.||+|.+.. +  +..||+|+... .......+.+|+.+++.++||||+++    ...+..++||||+++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~-~--g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~  170 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETA-T--GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG  170 (373)
T ss_dssp             EEECC-----CEEEEEETT-T--CCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             ceEEecCcCEEEEEEEEcC-C--CcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence            6789999999999999977 5  78899998322 22345678999999999999999988    567889999999999


Q ss_pred             ccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC-CCeeeEE-------------------
Q 036362           82 LNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS-DYTVKIA-------------------  137 (246)
Q Consensus        82 ~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~-~~~~~~~-------------------  137 (246)
                      ++|.+++....    +.....++.||+.||.|||++||+||||||+|||+..+ ....+++                   
T Consensus       171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~g  250 (373)
T 2x4f_A          171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG  250 (373)
T ss_dssp             CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCS
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccC
Confidence            99999886432    12222334499999999999999999999999998532 2234444                   


Q ss_pred             -------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCc
Q 036362          138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP  198 (246)
Q Consensus       138 -------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (246)
                                         |+|||||++++|++|..||.+.+.......+........                      
T Consensus       251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----------------------  308 (373)
T 2x4f_A          251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE----------------------  308 (373)
T ss_dssp             SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC----------------------
T ss_pred             CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC----------------------
Confidence                               499999999999999999998887776666665311110                      


Q ss_pred             chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          199 KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       199 ~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                         ...++.+++++++|+.+||..||.+|||+.|+++||||++.
T Consensus       309 ---~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          309 ---DEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             ---SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             ---hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence               01125688999999999999999999999999999999874

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=9.9e-42  Score=274.70  Aligned_cols=215  Identities=19%  Similarity=0.232  Sum_probs=162.5

Q ss_pred             CCccce-eeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEE
Q 036362            2 EKYRKV-ELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~-~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++. +.||+|+||.||+|.+.. +  ++.||+|+. .........+.+|+.++.++ +||||+++    ...+..++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l   88 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLI-T--SQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL   88 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSS-S--CCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcC-C--CcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            478885 789999999999999876 5  788999983 23334466889999999885 79999988    56779999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eee--------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVK--------------  135 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~--------------  135 (246)
                      ||||+++++|.+++....   ......+..||+.||.|||++||+||||||+|||++.++.  ..+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           89 VFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             EEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence            999999999999997642   2222334449999999999999999999999999976541  011              


Q ss_pred             -------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchH---------------
Q 036362          136 -------------------------------------IARLISVGCIFAEMVIQEPLSEDASESR---------------  163 (246)
Q Consensus       136 -------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~---------------  163 (246)
                                                           .+|+||+||++++|++|..||.+.....               
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  248 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM  248 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence                                                 2479999999999999999997654211               


Q ss_pred             HHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          164 ERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ....+..  +.                   ...    ....+..+++++++|+++||..||.+|||+.|+++||||++..
T Consensus       249 ~~~~i~~--~~-------------------~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          249 LFESIQE--GK-------------------YEF----PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHH--CC-------------------CCC----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             HHHHHhc--cC-------------------ccc----CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence            1111111  00                   000    0111246789999999999999999999999999999999864


Q ss_pred             C
Q 036362          244 S  244 (246)
Q Consensus       244 ~  244 (246)
                      +
T Consensus       304 ~  304 (316)
T 2ac3_A          304 P  304 (316)
T ss_dssp             -
T ss_pred             C
Confidence            3

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.3e-41  Score=298.45  Aligned_cols=210  Identities=17%  Similarity=0.212  Sum_probs=174.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      +++|++++.||+|+||.||+|++.. +  ++.||+|+.    .........+.+|..++..+ +||+|+.+    .+.+.
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~-~--~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~  416 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKG-T--DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR  416 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESS-S--CCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECC-C--CcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence            4689999999999999999999987 6  788999982    22344567788899999988 69999987    66788


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      +|+||||++|++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.++ ..+++|          
T Consensus       417 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g-~ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENIWD  495 (674)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSS-CEEECCCTTCEECCCT
T ss_pred             EEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCC-cEEEeecceeeccccC
Confidence            999999999999999997642   233344455999999999999999999999999999776 445544          


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +|||||+++||++|..||.+.+....+..+....  .              
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~--------------  559 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN--V--------------  559 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC--C--------------
T ss_pred             CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC--C--------------
Confidence                                         9999999999999999999888777766665510  0              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH-----HHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV-----NDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~-----~e~l~h~~~~~~~  243 (246)
                                   ..+..+++++++||++||+.||++||++     +|+++||||++++
T Consensus       560 -------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          560 -------------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             -------------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence                         0124689999999999999999999998     9999999999863

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.1e-42  Score=276.70  Aligned_cols=215  Identities=16%  Similarity=0.166  Sum_probs=161.0

Q ss_pred             CCCccce-eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccc-ccCCCCceEEe----c----CCc
Q 036362            1 MEKYRKV-ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPL-KEMDYPLIFRK----E----NDK   70 (246)
Q Consensus         1 l~~y~i~-~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l-~~l~~~~i~~~----~----~~~   70 (246)
                      +++|.+. +.||+|+||.||+|.+.. +  ++.||+|...    ......+|+.++ +..+||||+++    .    ...
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~----~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~   88 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKR-T--QEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRK   88 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEE----CSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcC-C--CcEEEEEEec----ccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence            3678887 789999999999999977 5  7899999832    345788899988 55689999987    2    267


Q ss_pred             eEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecC--CCeeeEEE-----
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR-----  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~--~~~~~~~D-----  138 (246)
                      ..++||||+++++|.+++.......+..     +..|++.||.|||++||+||||||+||+++.+  +...+++|     
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~  168 (299)
T 3m2w_A           89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  168 (299)
T ss_dssp             EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence            8999999999999999997654333333     34499999999999999999999999999973  23455554     


Q ss_pred             ------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCC
Q 036362          139 ------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP  206 (246)
Q Consensus       139 ------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (246)
                                  +||+||++++|++|..||..............           .          ............+.
T Consensus       169 ~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~-----------~----------~~~~~~~~~~~~~~  227 (299)
T 3m2w_A          169 ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT-----------R----------IRMGQYEFPNPEWS  227 (299)
T ss_dssp             ECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC-----------S----------SCTTCCSSCHHHHT
T ss_pred             ccccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH-----------H----------HhhccccCCchhcc
Confidence                        99999999999999999976443211000000           0          00000000111125


Q ss_pred             CCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       207 ~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+++++.+|+.+||+.||.+|||+.|+++||||++..
T Consensus       228 ~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             cCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            6899999999999999999999999999999998754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.4e-42  Score=287.57  Aligned_cols=214  Identities=20%  Similarity=0.274  Sum_probs=162.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---------CCCCcchhhhhhcccccCCCCceEEe---cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---------PDGVPISILTKISPLKEMDYPLIFRK---END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~   69 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+...         .......+.+|+.+++.++||||+++   ...
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERK-T--CKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECC-C--CcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            579999999999999999999987 5  78899998211         12233468899999999999999998   445


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeE--------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKI--------  136 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~--------  136 (246)
                      +..++||||+++++|.+++....   +.....++.|++.||.|||++||+||||||+|||++..+  ...++        
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~  291 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  291 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence            66899999999999998886532   222333444999999999999999999999999997543  11222        


Q ss_pred             ---------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          137 ---------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       137 ---------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                       +|+||+||++++|++|..||............... +.         
T Consensus       292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~-~~---------  361 (419)
T 3i6u_A          292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS-GK---------  361 (419)
T ss_dssp             CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT-TC---------
T ss_pred             cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc-CC---------
Confidence                                             45999999999999999999765433222222111 00         


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                    .......+..+++.+.+|+.+||+.||.+|||++|+|+||||++.
T Consensus       362 --------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          362 --------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             --------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             --------------CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence                          000112235689999999999999999999999999999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=3.2e-42  Score=278.76  Aligned_cols=212  Identities=19%  Similarity=0.220  Sum_probs=160.4

Q ss_pred             CCccce---eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CCceEEe----cCCceEE
Q 036362            2 EKYRKV---ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~---~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~   73 (246)
                      ++|++.   +.||+|+||.||+|.+.. +  ++.||+|+..  ........+|+.+++.+. ||||+++    .+....+
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~--~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~   82 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKK-S--NQAFAVKIIS--KRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF   82 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETT-T--CCEEEEEEEE--GGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hccccccCCCccccCCCeEEEEEEECC-C--CCEEEEEEEC--hhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE
Confidence            356664   789999999999999987 5  7889999832  234567889999999997 9999998    6678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eeeEE-----------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVKIA-----------  137 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~~~-----------  137 (246)
                      +||||+++++|.+++....   +.....+..|++.||.|||++||+||||||+|||++.++.  ..+++           
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           83 LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             EEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             EEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            9999999999999997642   2233334449999999999999999999999999975541  23333           


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcch-------HHHHHHHHhhCCCCcCcCCC
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASES-------RERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                  |+||+||++++|++|..||......       .....+...  ..       
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~--~~-------  233 (325)
T 3kn6_A          163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG--DF-------  233 (325)
T ss_dssp             ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT--CC-------
T ss_pred             CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC--CC-------
Confidence                                        4999999999999999999864431       111111110  00       


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                      ......++.+++++++|+.+||..||.+|||+.|+++||||++..
T Consensus       234 ----------------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          234 ----------------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             ----------------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             ----------------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence                            000111246899999999999999999999999999999998753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.3e-41  Score=270.86  Aligned_cols=211  Identities=20%  Similarity=0.226  Sum_probs=162.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe--------cCCce
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK--------ENDKL   71 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~~   71 (246)
                      .|++.+.||+|+||.||+|.+.. +  +..|++|...   ........+.+|+.+++.++||||+++        .....
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~-~--~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  103 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTE-T--TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecC-C--ceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence            47899999999999999999977 5  7778888722   222334578899999999999999987        23577


Q ss_pred             EEEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCCeeeEE---------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDYTVKIA---------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~~~~~~---------  137 (246)
                      .++||||+++++|.+++.....   .....+..|++.||.|||++|  |+||||||+||+++......+++         
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            9999999999999999976432   222333449999999999999  99999999999998333234443         


Q ss_pred             ---------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          138 ---------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 |+||+||++++|++|..||..................+               
T Consensus       184 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------  248 (290)
T 1t4h_A          184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP---------------  248 (290)
T ss_dssp             TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC---------------
T ss_pred             ccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc---------------
Confidence                                       59999999999999999998765544433322210000               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                 .......++++.+|+.+||+.||.+|||+.|+++||||++-
T Consensus       249 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          249 -----------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             -----------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             -----------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence                       01113567899999999999999999999999999999874

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.5e-41  Score=270.61  Aligned_cols=213  Identities=20%  Similarity=0.299  Sum_probs=168.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.+|+|. ..........+.+|+.+++.++||||+++    ...+..++||
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~-~--~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKE-T--GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETT-T--CCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEcC-C--CcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            579999999999999999999987 5  77889998 33334456788899999999999999988    5667899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-----------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-----------------  135 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-----------------  135 (246)
                      ||+++++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++ ..+                 
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~  174 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKR  174 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS-CEEECCCHHHHHHHHHHHC-
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC-CEEEEECCCCcccccccccc
Confidence            9999999999886532    222233344999999999999999999999999998665 122                 


Q ss_pred             ---------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          136 ---------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       136 ---------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 .+|+||+|+++++|++|..||...+.......+...  .+...          
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~----------  242 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--DPPTL----------  242 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCC----------
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc--CCccc----------
Confidence                                       356999999999999999999887665554444431  11000          


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                    .....+++++.+|+.+||..||.+|||+.++++||||+++..
T Consensus       243 --------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          243 --------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             --------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCC
T ss_pred             --------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhcc
Confidence                          001356889999999999999999999999999999998764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.1e-41  Score=275.88  Aligned_cols=213  Identities=21%  Similarity=0.241  Sum_probs=169.1

Q ss_pred             Cccce-eeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCC-CCceEEe----cCCceEE
Q 036362            3 KYRKV-ELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMD-YPLIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~-~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~-~~~i~~~----~~~~~~~   73 (246)
                      +|.+. +.||+|+||.||+|.+.. +  ++.||+|+..   ........+.+|+.+++.+. ||||+++    ...+..+
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~  105 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKS-T--GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII  105 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECC-C--CCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence            57777 889999999999999987 5  7889999822   22233567889999999994 6999988    6678899


Q ss_pred             EEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEec---CCCeeeE---------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINL---SDYTVKI---------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~---~~~~~~~---------  136 (246)
                      +||||+++++|.+++.......+     ..+..|++.||.|||++||+||||||+||+++.   ++ ..++         
T Consensus       106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~-~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLG-DIKIVDFGMSRKI  184 (327)
T ss_dssp             EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBC-CEEECCGGGCEEC
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCC-cEEEeeCcccccc
Confidence            99999999999999854322233     334449999999999999999999999999986   23 2333         


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+||+||++++|++|..||...+.......+.........          
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~----------  254 (327)
T 3lm5_A          185 GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE----------  254 (327)
T ss_dssp             ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------
T ss_pred             CCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc----------
Confidence                                         44999999999999999999988776666555553221111          


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                     ..+..+++.+.+|+.+||..||.+|||++++|+||||++.+.
T Consensus       255 ---------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          255 ---------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             ---------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             ---------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence                           112467899999999999999999999999999999998743

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.9e-41  Score=271.71  Aligned_cols=213  Identities=19%  Similarity=0.220  Sum_probs=167.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|... ........+.+|+.+++.++||||+++    ...+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRL-T--GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECC-C--CCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            479999999999999999999987 5  7789999832 223345678899999999999999988    5678899999


Q ss_pred             eccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEE---ecCCCeee---------------
Q 036362           77 EYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALI---NLSDYTVK---------------  135 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~---~~~~~~~~---------------  135 (246)
                      ||+++++|.+++....   ......+..|++.||.|||++||+||||||+||++   +.++ ..+               
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~-~~kl~Dfg~~~~~~~~~~  164 (304)
T 2jam_A           86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS-KIMITDFGLSKMEQNGIM  164 (304)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTC-CEEBCSCSTTCCCCCBTT
T ss_pred             EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCC-CEEEccCCcceecCCCcc
Confidence            9999999999986542   22223344499999999999999999999999999   3333 222               


Q ss_pred             ----------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          136 ----------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       136 ----------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                            .+|+||+||++++|++|..||...........+........                 
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------------  227 (304)
T 2jam_A          165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE-----------------  227 (304)
T ss_dssp             HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC-----------------
T ss_pred             ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-----------------
Confidence                                  35699999999999999999988776665555554211100                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                              ...+..+++++.+|+.+||..||.+|||+.|+++||||++..
T Consensus       228 --------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          228 --------SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             --------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             --------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence                    011246789999999999999999999999999999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.1e-41  Score=281.50  Aligned_cols=240  Identities=23%  Similarity=0.303  Sum_probs=174.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CC-----ceEEe----cCCc
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YP-----LIFRK----ENDK   70 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~-----~i~~~----~~~~   70 (246)
                      +++|++.+.||+|+||+||+|.+.. +  ++.||+|+..........+.+|+.+++.++ |+     +|+++    ...+
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRV-E--QEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT-T--TEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcC-C--CcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            3689999999999999999999987 5  788999984433333456777888888774 54     46665    4568


Q ss_pred             eEEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHh--hCceeeccCCCCCeEEecC-CCeeeEEE----
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYH--SNRCLHGRLNPYQALINLS-DYTVKIAR----  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH--~~~i~H~Dikp~Nil~~~~-~~~~~~~D----  138 (246)
                      ..++||||++ ++|.+++.......+.     .+..|++.||.|||  ++||+||||||+|||++.+ ....+++|    
T Consensus       130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            9999999998 6999999765322233     33449999999999  5799999999999999642 22344444    


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||++++|++|+.||.+.+.......+....+.++...+......
T Consensus       209 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  288 (382)
T 2vx3_A          209 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA  288 (382)
T ss_dssp             EETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTH
T ss_pred             eecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHH
Confidence                                            999999999999999999999988899999998888876554432221


Q ss_pred             cccccccCC-----------------CCcchhhhhC-----------C---C----CChHHHHHHHHhhhcCCCCCCCHH
Q 036362          187 FPFIYCYEE-----------------SEPKDLAILL-----------P---D----LEPAGVDLLQKMLRVNPKERITVN  231 (246)
Q Consensus       187 ~~~~~~~~~-----------------~~~~~~~~~~-----------~---~----~~~~~~~ll~~~l~~dp~~R~s~~  231 (246)
                      ..+....+.                 .....+....           .   .    .++++++||++||+.||++|||++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~  368 (382)
T 2vx3_A          289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPY  368 (382)
T ss_dssp             HHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             HHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHH
Confidence            111100000                 0000000000           0   0    014789999999999999999999


Q ss_pred             HHhcCCCCcCCCC
Q 036362          232 DALNHHYYRDVVS  244 (246)
Q Consensus       232 e~l~h~~~~~~~~  244 (246)
                      |+|+||||++...
T Consensus       369 e~L~hp~f~~~~~  381 (382)
T 2vx3_A          369 YALQHSFFKKTAD  381 (382)
T ss_dssp             HHTTSGGGCC---
T ss_pred             HHhcCcccccCCC
Confidence            9999999998643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.4e-41  Score=269.90  Aligned_cols=209  Identities=21%  Similarity=0.367  Sum_probs=169.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|++.. +  +..||+|...    ........+.+|+.+++.++||||+++    ...+..
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   89 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQ-N--KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI   89 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcC-C--CcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence            4689999999999999999999977 5  7788999821    223445678999999999999999987    567889


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      ++||||+++++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~kl~Dfg~~~~~~~~~  168 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGWSVHAPSLR  168 (284)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC-CEEECCCTTCEECSSSC
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC-CEEEecccccccCcccc
Confidence            99999999999999997643   222233444999999999999999999999999998666 2333             


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              +|+||+|+++++|++|..||...........+....  .                 
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~-----------------  229 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD--L-----------------  229 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC--C-----------------
T ss_pred             cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccc--c-----------------
Confidence                                    459999999999999999998776655444443310  0                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                ..++.+++++.+|+.+||..||.+|||+.++++||||++.
T Consensus       230 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          230 ----------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             ----------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             ----------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence                      0114578999999999999999999999999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=269.07  Aligned_cols=210  Identities=20%  Similarity=0.334  Sum_probs=163.3

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|++.. +  ++.||+|...    ........+.+|+.+++.++||||+++    ...+..
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIH-T--GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV   86 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEE
T ss_pred             cccceeeeeecCCCceEEEEEEEcc-C--CceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeE
Confidence            4689999999999999999999876 5  7789999821    123345678999999999999999988    667889


Q ss_pred             EEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------  135 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------  135 (246)
                      ++||||+++++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++ ..+             
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~~  165 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMP  165 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC-CEEECCCTTCEECC--
T ss_pred             EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-CEEEEeecceeeccCC
Confidence            99999999999999987642    222233444999999999999999999999999998765 122             


Q ss_pred             --------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          136 --------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       136 --------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                .+|+||+|+++++|++|..||...........+..                   
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------------  226 (278)
T 3cok_A          166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-------------------  226 (278)
T ss_dssp             --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS-------------------
T ss_pred             CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh-------------------
Confidence                                      34699999999999999999976543222111000                   


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                          ..      ...+..+++++.+|+.+||..||++|||+.++++||||.+..
T Consensus       227 ----~~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          227 ----AD------YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             ----SC------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             ----cc------cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence                00      011245789999999999999999999999999999998754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.2e-41  Score=269.00  Aligned_cols=212  Identities=20%  Similarity=0.252  Sum_probs=166.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|..  .........+.+|+.+++.++||||+++    ...+..++|
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRV-T--EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECC-C--CcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence            579999999999999999999976 5  778999983  2223345678899999999999999988    556789999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee------------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV------------------  134 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~------------------  134 (246)
                      |||+++++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++ ..                  
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCCTTCEECEETTEEC
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC-CEEEeeCCCccccCCCcchh
Confidence            99999999999986532   222233444999999999999999999999999998765 11                  


Q ss_pred             ------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHH-HHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          135 ------------------------KIARLISVGCIFAEMVIQEPLSEDASESRE-RISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       135 ------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                              ..+|+||+|+++++|++|..||........ ....... ..               
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~---------------  226 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-KT---------------  226 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT-CT---------------
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc-cc---------------
Confidence                                    235699999999999999999987654322 2211110 00               


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                 ....+..+++.+.+|+.+||..||.+|||+.|+++||||++...
T Consensus       227 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          227 -----------YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             -----------TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             -----------ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence                       00001357899999999999999999999999999999998643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=4.4e-42  Score=278.93  Aligned_cols=239  Identities=21%  Similarity=0.279  Sum_probs=175.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCc------eEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL------IFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|.+...+  +..||+|+..........+.+|+.+++.++|++      ++++    ...+.
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAG--GRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTT--TEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCC--CcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            68999999999999999999984435  778999985443344567888999999887654      6665    55679


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      .++||||+ +++|.+++.......+.     .+..||+.||.|||++||+||||||+|||++..+               
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~  170 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT  170 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred             EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence            99999999 59999999765422332     3444999999999999999999999999997531               


Q ss_pred             ---CeeeEEE------------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh
Q 036362          132 ---YTVKIAR------------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       132 ---~~~~~~D------------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~  172 (246)
                         ...+++|                                    +||+||++++|++|..||...+.......+....
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  250 (339)
T 1z57_A          171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL  250 (339)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred             ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence               1234444                                    9999999999999999999888877777777777


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCc---------------chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEP---------------KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH  237 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~  237 (246)
                      +..+...+........+......+..               ..........++++.+|+.+||..||.+|||+.|+++||
T Consensus       251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  330 (339)
T 1z57_A          251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHP  330 (339)
T ss_dssp             CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred             CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCH
Confidence            76554432221111110000000000               000001122457899999999999999999999999999


Q ss_pred             CCcCCC
Q 036362          238 YYRDVV  243 (246)
Q Consensus       238 ~~~~~~  243 (246)
                      ||+++.
T Consensus       331 ~f~~~~  336 (339)
T 1z57_A          331 FFDLLK  336 (339)
T ss_dssp             GGGGGG
T ss_pred             HHHHHh
Confidence            999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=9.9e-42  Score=291.24  Aligned_cols=209  Identities=17%  Similarity=0.244  Sum_probs=166.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+.    .........+.+|+.+++.++||||+++    ......|
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~-t--g~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  261 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKA-T--GKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC  261 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECC-C--CcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence            689999999999999999999987 5  788999982    1223445678899999999999999988    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------  138 (246)
                      +||||++|++|.+++....  ...+.     .+..||+.||.|||++||+||||||+|||++.++ ..+++|        
T Consensus       262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g-~vkL~DFGla~~~~  340 (543)
T 3c4z_A          262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELK  340 (543)
T ss_dssp             EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-CEEECCCTTCEECC
T ss_pred             EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCC-CEEEeecceeeecc
Confidence            9999999999999986532  12233     3344999999999999999999999999999776 344444        


Q ss_pred             -------------------------------eehhhHHHHHHhhCCCCCCCCcc----hHHHHHHHHhhCCCCcCcCCCC
Q 036362          139 -------------------------------LISVGCIFAEMVIQEPLSEDASE----SRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       139 -------------------------------i~slG~i~~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                                     +||+||++++|++|..||.....    ......+...  ..        
T Consensus       341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~--------  410 (543)
T 3c4z_A          341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AV--------  410 (543)
T ss_dssp             TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CC--------
T ss_pred             CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--cc--------
Confidence                                           99999999999999999987543    1222222220  00        


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                         ..+..+++++++|+++||+.||.+||+     ++++++||||++++
T Consensus       411 -------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          411 -------------------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             -------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             -------------------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence                               012467899999999999999999996     58999999999863

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.5e-42  Score=286.29  Aligned_cols=236  Identities=21%  Similarity=0.288  Sum_probs=169.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC--------CCceEEe----c--
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD--------YPLIFRK----E--   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~--------~~~i~~~----~--   67 (246)
                      ++|++.++||+|+||+||+|++.. +  ++.||+|+..........+.+|+.+++.++        |+||+++    .  
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQ-G--KKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEecC-C--CeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            589999999999999999999877 6  788999985444444567889999999885        7789887    1  


Q ss_pred             --CCceEEEEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCC--------
Q 036362           68 --NDKLVYQIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSD--------  131 (246)
Q Consensus        68 --~~~~~~lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~--------  131 (246)
                        .....++||||++ ++|.+.+.......+     ..++.||+.||.|||++ ||+||||||+|||++.++        
T Consensus       114 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~  192 (397)
T 1wak_A          114 GVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA  192 (397)
T ss_dssp             ETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred             CCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence              5678999999997 777666654322223     33444999999999998 999999999999998542        


Q ss_pred             ----------------------------------------CeeeEE----------------------------------
Q 036362          132 ----------------------------------------YTVKIA----------------------------------  137 (246)
Q Consensus       132 ----------------------------------------~~~~~~----------------------------------  137 (246)
                                                              ...+++                                  
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  272 (397)
T 1wak_A          193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT  272 (397)
T ss_dssp             HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred             hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence                                                    134444                                  


Q ss_pred             --EeehhhHHHHHHhhCCCCCCCCc------chHHHHHHHHhhCCCCcCcCCCCCCcccccc------ccCCCCcch---
Q 036362          138 --RLISVGCIFAEMVIQEPLSEDAS------ESRERISIFRLMGEPSEETLPGVTTFFPFIY------CYEESEPKD---  200 (246)
Q Consensus       138 --Di~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---  200 (246)
                        |+|||||++++|++|+.||.+..      .......+.+..|.++...+........+..      .........   
T Consensus       273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (397)
T 1wak_A          273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE  352 (397)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence              49999999999999999997644      3456677777777765432211000000000      000000000   


Q ss_pred             -hh---hhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          201 -LA---ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       201 -~~---~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                       ..   ......++.+.+||.+||+.||++|||+.|+|+||||++
T Consensus       353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence             00   011224567899999999999999999999999999974

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.8e-41  Score=281.49  Aligned_cols=209  Identities=17%  Similarity=0.192  Sum_probs=159.2

Q ss_pred             CCccce-eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccccc-CCCCceEEe--------cCCce
Q 036362            2 EKYRKV-ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKE-MDYPLIFRK--------ENDKL   71 (246)
Q Consensus         2 ~~y~i~-~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~--------~~~~~   71 (246)
                      ++|.+. +.||+|+||+||+|.+.. +  ++.||+|+..    ....+.+|+.++.. .+||||+++        .....
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~-~--~~~vAiK~~~----~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKR-T--QEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEE----CSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECC-C--CCEEEEEEeC----cchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            577777 689999999999999987 6  7889999832    33567889888754 589999987        12567


Q ss_pred             EEEEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecC--CCeeeEE-------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIA-------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~--~~~~~~~-------  137 (246)
                      .|+||||++|++|.+++.......+     ..++.||+.||.|||++||+||||||+|||++..  +...+++       
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            8999999999999999976432223     3344499999999999999999999999999863  2234444       


Q ss_pred             -------------------------------EeehhhHHHHHHhhCCCCCCCCcchH----HHHHHHHhhCCCCcCcCCC
Q 036362          138 -------------------------------RLISVGCIFAEMVIQEPLSEDASESR----ERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       138 -------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  182 (246)
                                                     |+|||||++++|++|..||.+.....    ....+..  +...      
T Consensus       214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~--~~~~------  285 (400)
T 1nxk_A          214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM--GQYE------  285 (400)
T ss_dssp             CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH--TCCC------
T ss_pred             cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc--Cccc------
Confidence                                           49999999999999999997654321    1122211  1000      


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                .+       ...+..+++++.+||++||..||.+|||+.|+++||||.+.
T Consensus       286 ----------~~-------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          286 ----------FP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             ----------CC-------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ----------CC-------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence                      00       01124689999999999999999999999999999999764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1e-41  Score=276.13  Aligned_cols=207  Identities=18%  Similarity=0.295  Sum_probs=157.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe-----cC------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK-----EN------   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~------   68 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..  ........+.+|+.+++.++||||+++     ..      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   82 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKV-D--DCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ   82 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETT-T--CCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcC-C--CcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence            689999999999999999999986 5  7889999832  333445688999999999999999987     11      


Q ss_pred             --------------------------------------------------CceEEEEEeccCcccHHHHHhhhccc-c--
Q 036362           69 --------------------------------------------------DKLVYQIFEYTGLLNLRKVIKNFLDI-I--   95 (246)
Q Consensus        69 --------------------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~-~--   95 (246)
                                                                        ....++||||+++++|.+++...... .  
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  162 (332)
T 3qd2_B           83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE  162 (332)
T ss_dssp             HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred             hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence                                                              12489999999999999999764321 1  


Q ss_pred             ---cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------------------------------
Q 036362           96 ---NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------------------------------  135 (246)
Q Consensus        96 ---~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------------------------------  135 (246)
                         ...++.||+.||.|||++||+||||||+|||++.++ ..+                                     
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCC-CEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence               223455999999999999999999999999998665 112                                     


Q ss_pred             --------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchh
Q 036362          136 --------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDL  201 (246)
Q Consensus       136 --------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (246)
                                    .+|+||+||++++|++|..|+..     .............                         
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~~-------------------------  291 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLKF-------------------------  291 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTCC-------------------------
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccCC-------------------------
Confidence                          24599999999999998665421     1111111111000                         


Q ss_pred             hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          202 AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       202 ~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      .......++++.+|+.+||+.||.+|||+.|+++||||+++
T Consensus       292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence            00012356788999999999999999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.8e-41  Score=268.06  Aligned_cols=215  Identities=19%  Similarity=0.259  Sum_probs=170.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC----------CCcchhhhhhcccccCC-CCceEEe---
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----------GVPISILTKISPLKEMD-YPLIFRK---   66 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~-~~~i~~~---   66 (246)
                      .++|++.+.||+|+||.||+|.+.. +  ++.||+|+.....          .....+.+|+.+++++. ||||+++   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKP-T--CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhccceeeeecCCCceEEEEEEEcC-c--CceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            4789999999999999999999987 5  7889999832221          12346778999999995 9999988   


Q ss_pred             -cCCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-----------
Q 036362           67 -ENDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-----------  131 (246)
Q Consensus        67 -~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-----------  131 (246)
                       ...+..++||||+++++|.+++....   ......+..||+.||.|||++|++||||||+||+++.++           
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A           93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence             66788999999999999999997642   222333444999999999999999999999999998776           


Q ss_pred             -----------------Cee---------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          132 -----------------YTV---------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       132 -----------------~~~---------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                       .+|               ..+|+||+|+++++|++|..||...........+........   
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---  249 (298)
T 1phk_A          173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG---  249 (298)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---
T ss_pred             hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccC---
Confidence                             011               135799999999999999999987766555554444211000   


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                            ...++.+++.+.+|+.+||..||.+|||+.|+++||||++..
T Consensus       250 ----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          250 ----------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             ----------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             ----------------------cccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence                                  001135789999999999999999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.3e-41  Score=278.81  Aligned_cols=237  Identities=17%  Similarity=0.214  Sum_probs=166.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..||+|+...  .......+.+|+.+++.++||||+++    ...+..++|
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKP-S--GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceeeeeecCCCCeEEEEEEECC-C--CcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence            579999999999999999999987 5  78899998322  22234578899999999999999998    557789999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCCCeeeEE--------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSDYTVKIA--------------  137 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~~~~~~~--------------  137 (246)
                      |||+++++|.+++....   ......+..|++.||.|||++ ||+||||||+||+++.++ ..+++              
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~  188 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN  188 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-CEEECCCCCCHHHHHHC--
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCC-CEEEEECCCCccccccccc
Confidence            99999999999997642   222233444999999999996 999999999999999766 34444              


Q ss_pred             -----------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCC-CCcCcCCCCCCccccc-cc
Q 036362          138 -----------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE-PSEETLPGVTTFFPFI-YC  192 (246)
Q Consensus       138 -----------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~  192 (246)
                                             |+||+||++++|++|..||...+.......+...... +.............+. ..
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3eqc_A          189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG  268 (360)
T ss_dssp             --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred             CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence                                   4999999999999999999876654432222111111 1100000000000000 00


Q ss_pred             cCCCCcc-------------hhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPK-------------DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~-------------~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      .......             ........+++++.+|+.+||+.||++|||+.|+++||||++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence            0000000             0000113478899999999999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.2e-41  Score=268.34  Aligned_cols=216  Identities=22%  Similarity=0.288  Sum_probs=171.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+.   .........+.+|+.+++.++||||+++    ...+..++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~-~--~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRI-T--QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcC-C--CcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            579999999999999999999976 5  778899982   2233456688899999999999999988    56788999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeE-------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKI-------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~-------------  136 (246)
                      ||||+++++|.+++....   ......+..||+.||.|||++|++||||||+||+++.++  ...++             
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            999999999999886542   222233444999999999999999999999999997543  12333             


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              +|+||+|+++++|++|..||.+.........+........                
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------  242 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------------  242 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------------
T ss_pred             ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----------------
Confidence                                    3599999999999999999988776655554444110000                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                               ...+..+++++.+|+.+||..||.+|||+.|+++||||++..+.
T Consensus       243 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~  286 (287)
T 2wei_A          243 ---------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE  286 (287)
T ss_dssp             ---------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCCC
T ss_pred             ---------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccccC
Confidence                     00124678999999999999999999999999999999886553

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.8e-41  Score=270.96  Aligned_cols=212  Identities=23%  Similarity=0.252  Sum_probs=170.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe-----c-----CCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK-----E-----NDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~-----~-----~~~   70 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..........+.+|+.+++.+ +||||+++     .     ..+
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           24 GIFELVELVGNGTYGQVYKGRHVK-T--GQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             CcEEEEEEeccCCCEEEEEEEECC-C--CCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            589999999999999999999976 5  77899998555555677899999999999 79999987     1     156


Q ss_pred             eEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------  135 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------  135 (246)
                      ..++||||+++++|.+++.......+..     +..||+.||.|||++||+||||||+||+++.++ ..+          
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA-EVKLVDFGVSAQL  179 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC-CEEECCCTTTC--
T ss_pred             eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC-CEEEeeCcCceec
Confidence            8999999999999999997643333333     344999999999999999999999999998665 111          


Q ss_pred             ----------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          136 ----------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       136 ----------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                        .+|+|||||++++|++|..||...........+...  ....    
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~----  253 (326)
T 2x7f_A          180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--PAPR----  253 (326)
T ss_dssp             -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCC----
T ss_pred             CcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--cccc----
Confidence                                              146999999999999999999877665544433331  0000    


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                           .....+++.+.+|+.+||..||.+|||+.++++||||++.+.
T Consensus       254 ---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          254 ---------------------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             ---------------------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             ---------------------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence                                 001467899999999999999999999999999999998653

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.1e-41  Score=268.75  Aligned_cols=213  Identities=19%  Similarity=0.226  Sum_probs=168.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-------CCCcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-------DGVPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|.....       ......+.+|+.+++.++||||+++    ....
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKG-T--GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhHHhhcccCceEEEEEEEcC-C--CCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            479999999999999999999987 5  778888872111       1134678899999999999999988    5678


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---eeeE--------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKI--------  136 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---~~~~--------  136 (246)
                      ..++||||+++++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++.   ..++        
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            8999999999999999997532   2223334449999999999999999999999999986541   2333        


Q ss_pred             ------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          137 ------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       137 ------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                    +|+||+|+++++|++|..||...........+.......           
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----------  230 (283)
T 3bhy_A          162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF-----------  230 (283)
T ss_dssp             CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC-----------
T ss_pred             ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCC-----------
Confidence                                          349999999999999999998877655544443311000           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                    ....+...++.+.+|+.+||..||.+|||+.|+++||||+++
T Consensus       231 --------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          231 --------------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             --------------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             --------------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence                          011225678999999999999999999999999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.6e-41  Score=267.20  Aligned_cols=208  Identities=20%  Similarity=0.221  Sum_probs=168.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|...    ........+.+|+.+++.++||||+++    ...+..+
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQL-T--GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF   87 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECC-C--CceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE
Confidence            689999999999999999999986 5  7789999821    223445678899999999999999988    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee----------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV----------------  134 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~----------------  134 (246)
                      +||||+++++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++ ..                
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS-CEEECCCCGGGCCCC---
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC-CEEEeecccccccCCCcc
Confidence            9999999999999997642   222233344999999999999999999999999998765 12                


Q ss_pred             -----------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          135 -----------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       135 -----------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                             ..+|+||+|+++++|++|..||...........+...  ..                
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~----------------  228 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VF----------------  228 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC----------------
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--cc----------------
Confidence                                   2356999999999999999999876655444444331  00                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                 ..+..+++++.+++.+||+.||.+|||+.|+++||||++.
T Consensus       229 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          229 -----------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             -----------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence                       0113568899999999999999999999999999999875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=3.2e-41  Score=272.54  Aligned_cols=213  Identities=21%  Similarity=0.260  Sum_probs=161.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---------CCCCcchhhhhhcccccCCCCceEEe---cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---------PDGVPISILTKISPLKEMDYPLIFRK---END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~   69 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....         .......+.+|+.+++.++||||+++   ...
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERK-T--CKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hceeEeeEEecCCCEEEEEEEEcC-C--CcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            479999999999999999999987 5  78899998221         11234468899999999999999998   333


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eeeE--------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVKI--------  136 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~~--------  136 (246)
                      +..++||||+++++|.+++....   ......+..||+.||.|||++||+||||||+||+++.++.  ..++        
T Consensus        87 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  166 (322)
T 2ycf_A           87 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  166 (322)
T ss_dssp             SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred             CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence            45899999999999999986542   1222333449999999999999999999999999986441  1333        


Q ss_pred             ---------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHH-HHHHHhhCCCCcCcCCC
Q 036362          137 ---------------------------------ARLISVGCIFAEMVIQEPLSEDASESRER-ISIFRLMGEPSEETLPG  182 (246)
Q Consensus       137 ---------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  182 (246)
                                                       +|+|||||++++|++|..||......... ..+...  ..       
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~-------  237 (322)
T 2ycf_A          167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG--KY-------  237 (322)
T ss_dssp             CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHT--CC-------
T ss_pred             cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhC--cc-------
Confidence                                             45999999999999999999765433222 222221  00       


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                      ......+..+++++.+|+.+||..||.+|||+.++++||||++.
T Consensus       238 ----------------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          238 ----------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             ----------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             ----------------ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence                            00112235688999999999999999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.4e-41  Score=268.68  Aligned_cols=208  Identities=19%  Similarity=0.242  Sum_probs=159.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|...   ........+.+|+..+..+ +||||+++    ...+..+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRL-D--GCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcC-C--CceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            479999999999999999999986 5  7789999832   2233456788899999999 89999998    5577999


Q ss_pred             EEEeccCcccHHHHHhhhc-------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL-------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      +||||+++++|.+++....       ......++.||+.||.|||++||+||||||+||+++.++               
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            9999999999999997642       223333444999999999999999999999999998432               


Q ss_pred             ---Ceee------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh
Q 036362          132 ---YTVK------------------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       132 ---~~~~------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~  172 (246)
                         ...+                                    .+|+||+||++++|++|.+++......   ..+..  
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---~~~~~--  242 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQ--  242 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH---HHHHT--
T ss_pred             CCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH---HHHHc--
Confidence               1122                                    345999999999999998776544322   11211  


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +.                          ....+..+++++.+|+.+||..||.+|||+.|+++||||++..
T Consensus       243 ~~--------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          243 GR--------------------------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             TC--------------------------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             CC--------------------------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence            00                          0011246789999999999999999999999999999999754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-41  Score=276.83  Aligned_cols=215  Identities=14%  Similarity=0.218  Sum_probs=165.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-----CCCCcchhhhhhcccccC-CCCceEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-----PDGVPISILTKISPLKEM-DYPLIFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|+.......++.||+|+...     .......+.+|+.+++.+ +||||+++    ...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            689999999999999999999853122278899998221     234556788999999999 69999987    55678


Q ss_pred             EEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-------------  135 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-------------  135 (246)
                      .++||||+++++|.+++....   ......+..||+.||.|||++||+||||||+|||++.++ ..+             
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~  212 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG-HVVLTDFGLSKEFVAD  212 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEESCSSEEEECCGG
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-cEEEeeCCCCeecccC
Confidence            999999999999999997642   222333444999999999999999999999999998765 222             


Q ss_pred             -----------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHh-hCCCCcCcCCCCCC
Q 036362          136 -----------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRL-MGEPSEETLPGVTT  185 (246)
Q Consensus       136 -----------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  185 (246)
                                                   .+|+|||||++++|++|..||...........+... ....          
T Consensus       213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----------  282 (355)
T 1vzo_A          213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE----------  282 (355)
T ss_dssp             GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC----------
T ss_pred             CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC----------
Confidence                                         246999999999999999999754332111111111 0000          


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                      ...+..+++.+.+|+.+||..||.+||     |++|+++||||++++
T Consensus       283 ----------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          283 ----------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             ----------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             ----------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence                            001246789999999999999999999     999999999999863

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=7.2e-41  Score=268.35  Aligned_cols=209  Identities=18%  Similarity=0.226  Sum_probs=164.8

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-----CCCCCcchhhhhhcccccCCCCceEEe------cCC
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----IPDGVPISILTKISPLKEMDYPLIFRK------END   69 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~   69 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..+|+|+..     ........+.+|+.+++.++||||+++      ...
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~-~--~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSE-T--LCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEK   80 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTT-T--CCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC--
T ss_pred             ccceeEeeEEecCCCeEEEEEEECC-C--CcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCC
Confidence            4789999999999999999999877 5  7788998822     123445788999999999999999987      235


Q ss_pred             ceEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe-----------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT-----------  133 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~-----------  133 (246)
                      ...++||||++ ++|.+++.......+..     +..||+.||.|||++||+||||||+||+++.++ .           
T Consensus        81 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~-~~kl~dfg~~~~  158 (305)
T 2wtk_C           81 QKMYMVMEYCV-CGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG-TLKISALGVAEA  158 (305)
T ss_dssp             -CEEEEEECCS-EEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCCTTCEE
T ss_pred             CeEEEEehhcc-CCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCC-cEEeeccccccc
Confidence            68899999999 45877776543333333     334999999999999999999999999998665 1           


Q ss_pred             --------------------------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          134 --------------------------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       134 --------------------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                      ...+|+||+|+++++|++|..||.+.........+...  ..      
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~------  230 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SY------  230 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CC------
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--CC------
Confidence                                            12357999999999999999999887665554444331  00      


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                           .....+++.+.+|+.+||..||.+|||+.|+++||||++..
T Consensus       231 ---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          231 ---------------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             ---------------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             ---------------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence                                 01246789999999999999999999999999999998753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=6.6e-41  Score=275.09  Aligned_cols=212  Identities=19%  Similarity=0.274  Sum_probs=167.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---------CcchhhhhhcccccC-CCCceEEe----c
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---------VPISILTKISPLKEM-DYPLIFRK----E   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l-~~~~i~~~----~   67 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+......         ....+.+|+.+++.+ +||||+++    .
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~-~--g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRA-T--GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECC-C--CcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            368999999999999999999976 5  78899998322211         134678899999999 79999987    5


Q ss_pred             CCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------  131 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------  131 (246)
                      .....++||||++|++|.+++....   ......+..||+.||.|||++||+||||||+||+++.++             
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            6788999999999999999997542   222333444999999999999999999999999999776             


Q ss_pred             ---------------Cee---------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          132 ---------------YTV---------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       132 ---------------~~~---------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                     .+|               ..+|+|||||++++|++|..||...........+.......      
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~------  324 (365)
T 2y7j_A          251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF------  324 (365)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC------
T ss_pred             CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC------
Confidence                           011               13579999999999999999998776655555444411000      


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                         ....+...++.+.+|+.+||..||.+|||+.|+++||||+.
T Consensus       325 -------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          325 -------------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             -------------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             -------------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence                               00112467899999999999999999999999999999974

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=6.9e-41  Score=271.96  Aligned_cols=202  Identities=16%  Similarity=0.209  Sum_probs=161.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---------CCCcchhhhhhcccccCCCCceEEe----cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---------DGVPISILTKISPLKEMDYPLIFRK----EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~~~~i~~~----~~   68 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+....         ......+.+|+.+++.++||||+++    ..
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKE-K--NKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETT-T--TEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             cceEEEeEEEecCCEEEEEEEECC-C--CcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            479999999999999999999877 6  788999982222         1245578889999999999999998    66


Q ss_pred             CceEEEEEeccCcc-cHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------
Q 036362           69 DKLVYQIFEYTGLL-NLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------  136 (246)
Q Consensus        69 ~~~~~lv~e~~~~~-~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------  136 (246)
                      .+..++||||+.++ +|.+++....   ......+..||+.||.|||++||+||||||+|||++.++ ..++        
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~a~~  179 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF-TIKLIDFGSAAY  179 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-CEEECCCTTCEE
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC-cEEEeecccceE
Confidence            78899999998655 9999997643   222233444999999999999999999999999998765 2222        


Q ss_pred             -------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 -------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 -------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                     +|+||+||++++|++|..||.......         ..           
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------~~-----------  239 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------EA-----------  239 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------TT-----------
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------hh-----------
Confidence                                           459999999999999999997532210         00           


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                     ....+..+++++.+|+.+||..||.+|||+.|+++||||++.
T Consensus       240 ---------------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          240 ---------------AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             ---------------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             ---------------ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence                           000113578999999999999999999999999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.7e-41  Score=276.06  Aligned_cols=239  Identities=19%  Similarity=0.225  Sum_probs=172.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCc------eEEe----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL------IFRK----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~------i~~~----~~~~~   71 (246)
                      ++|++.+.||+|+||+||+|.+..+.  +..||+|+..........+.+|+.+++.++|++      ++.+    ...+.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARG--KSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTT--TEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCC--ceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            68999999999999999999997634  468999985443344567888999999887654      5554    45678


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEec-----------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINL-----------------  129 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~-----------------  129 (246)
                      .++||||++ ++|.+++.......+.     .+..||+.||.|||++||+||||||+|||++.                 
T Consensus        97 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~  175 (355)
T 2eu9_A           97 MCIAFELLG-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS  175 (355)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred             EEEEEeccC-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccc
Confidence            999999996 7777777654322232     33449999999999999999999999999932                 


Q ss_pred             -CCCeeeE------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhh
Q 036362          130 -SDYTVKI------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM  172 (246)
Q Consensus       130 -~~~~~~~------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~  172 (246)
                       .....++                                    +|+||+||++++|++|..||...........+....
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  255 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL  255 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence             1223333                                    349999999999999999999888888888888877


Q ss_pred             CCCCcCcCCCCCCccccccccCCCCc---------------chhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCC
Q 036362          173 GEPSEETLPGVTTFFPFIYCYEESEP---------------KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH  237 (246)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~  237 (246)
                      +.++..++........+......+..               ..........++++.+|+.+||+.||++|||+.|+++||
T Consensus       256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp  335 (355)
T 2eu9_A          256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHP  335 (355)
T ss_dssp             CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred             CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            77655432221111110000000000               000000112346899999999999999999999999999


Q ss_pred             CCcCCC
Q 036362          238 YYRDVV  243 (246)
Q Consensus       238 ~~~~~~  243 (246)
                      ||+++.
T Consensus       336 ~f~~~~  341 (355)
T 2eu9_A          336 FFAGLT  341 (355)
T ss_dssp             GGGGCC
T ss_pred             hhcCCC
Confidence            999874

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.2e-41  Score=272.23  Aligned_cols=212  Identities=18%  Similarity=0.221  Sum_probs=167.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC----CcchhhhhhcccccCCCCceEEe--------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG----VPISILTKISPLKEMDYPLIFRK--------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~--------~~~   69 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+......    ....+.+|+.+++.++||||+++        ..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLR-D--HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECC-C--CceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence            689999999999999999999977 5  78899998332221    12467899999999999999988        112


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------  136 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------  136 (246)
                      ...++||||++|++|.+++....   ......+..|++.||.|||++||+||||||+|||++.++ ..++          
T Consensus        89 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN-AVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS-CEEECCCSCC----
T ss_pred             cccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC-CEEEeeccCccccc
Confidence            34599999999999999997642   222233444999999999999999999999999998766 2333          


Q ss_pred             --------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          137 --------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       137 --------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                      +|+||+||++++|++|..||.+................          
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~----------  237 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI----------  237 (311)
T ss_dssp             --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC----------
T ss_pred             ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC----------
Confidence                                            34999999999999999999887765554444431110          


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                     ........+++++.+|+.+||+.||.+||++.+++.|+|++..
T Consensus       238 ---------------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          238 ---------------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             ---------------CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ---------------CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence                           1112235689999999999999999999999999999998753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=9.3e-41  Score=271.29  Aligned_cols=208  Identities=20%  Similarity=0.303  Sum_probs=167.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.+|+|+...    .......+.+|+.+++.++||||+++    ...+..+
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDAD-T--KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            579999999999999999999987 5  77888888221    12234678889999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      +||||+++++|.+++....   ......+..||+.||.|||++||+||||||+||+++.++ ..++              
T Consensus       118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~-~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-CEEECCCTTCEECCSTTC
T ss_pred             EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC-CEEEeeccCceecccCcc
Confidence            9999999999999987642   222333444999999999999999999999999998765 2333              


Q ss_pred             -------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          137 -------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       137 -------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                               +|+||||+++++|++|..||...........+...  ..                
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~----------------  258 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY----------------  258 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CC----------------
T ss_pred             cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CC----------------
Confidence                                     45999999999999999999877655544443331  00                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                 .....+++.+.+|+.+||..||.+|||+.|+++||||.+.
T Consensus       259 -----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          259 -----------SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             -----------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence                       0114578899999999999999999999999999999874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=9.6e-41  Score=266.39  Aligned_cols=208  Identities=20%  Similarity=0.303  Sum_probs=167.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.+|+|+...    .......+.+|+.+++.++||||+++    ...+..+
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDAD-T--KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECC-C--CceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            579999999999999999999987 5  77888887221    12234577889999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      +||||+++++|.+++....   ......+..|++.||.|||++|++||||||+||+++.++ ..++              
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEECCSTTC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC-CEEEEeccCceecccCcc
Confidence            9999999999999987642   222333444999999999999999999999999999765 2233              


Q ss_pred             -------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          137 -------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       137 -------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                               +|+||+|+++++|++|..||...........+...  ..                
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~----------------  232 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY----------------  232 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CC----------------
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc--cC----------------
Confidence                                     45999999999999999999877655444333321  00                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                 ..+..+++.+.+|+.+||..||++|||+.|+++||||++.
T Consensus       233 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          233 -----------SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             -----------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             -----------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence                       0124578899999999999999999999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.9e-41  Score=271.55  Aligned_cols=205  Identities=19%  Similarity=0.251  Sum_probs=155.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---CcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.++||+|+||+||+|++.. +  ++.||+|+......   .......|+..+..+ +||||+++    ..++..+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKE-D--GRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETT-T--SCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECC-C--CeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            469999999999999999999986 5  78899997322222   223445555555555 89999988    5678899


Q ss_pred             EEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||++ ++|.+++.....    .....++.||+.||.|||++||+||||||+|||++.++ .+++             
T Consensus       134 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~-~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          134 LQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG-RCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             EEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG-CEEECCCTTCEECC---
T ss_pred             EEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC-CEEEccceeeeecccCC
Confidence            9999996 899998876431    22223444999999999999999999999999998665 3333             


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              +|+||+||++++|++|..++........   +..  +..                 
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~--~~~-----------------  269 (311)
T 3p1a_A          212 AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ---LRQ--GYL-----------------  269 (311)
T ss_dssp             ---CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH---HTT--TCC-----------------
T ss_pred             CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---Hhc--cCC-----------------
Confidence                                    3599999999999999776654332211   111  000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                              .......+++++.+|+.+||+.||++|||+.|+++||||++
T Consensus       270 --------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          270 --------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             --------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             --------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                    01122568999999999999999999999999999999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.4e-40  Score=266.37  Aligned_cols=212  Identities=23%  Similarity=0.285  Sum_probs=164.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|.... ......+.+|+.+++.++||||+++    ...+..++|||
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAIHKE-T--GQIVAIKQVPV-ESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             -CEEEEEECC----CEEEEEEETT-T--CCEEEEEEEET-TSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhhhheeeccCCCeEEEEEEECC-C--CCEEEEEecCc-hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            579999999999999999999977 5  77899998432 3346788999999999999999988    45678999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |+++++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++ ..++                 
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~kl~dfg~~~~~~~~~~~~~  183 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG-HAKLADFGVAGQLTDTMAKRN  183 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-CEEECCCTTCEECBTTBSCBC
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCC-CEEEeecccchhhhhhccccC
Confidence            999999999986422    222233344999999999999999999999999998766 2233                 


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                            +|+||+|+++++|++|..||...........+...  .+.. .               
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~-~---------------  245 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPT-F---------------  245 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCC-C---------------
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCcc-c---------------
Confidence                                  45999999999999999999876655443333221  1000 0               


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                              .....+++.+.+|+.+||..||.+|||+.++++||||++...
T Consensus       246 --------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          246 --------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             --------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred             --------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence                    001346889999999999999999999999999999998653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=7.8e-41  Score=264.90  Aligned_cols=211  Identities=19%  Similarity=0.251  Sum_probs=167.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe------cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK------ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~   71 (246)
                      +++|++.+.||+|+||.||+|.+.. +  ++.||+|.....   ......+.+|+.+++.++||||+++      .....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKS-D--GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECC-C--CcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCce
Confidence            3689999999999999999999987 5  778899983222   2234568899999999999999987      23568


Q ss_pred             EEEEEeccCcccHHHHHhhhc-------ccccchHHHHHHHHHHHHhhCc-----eeeccCCCCCeEEecCCCeeeE---
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL-------DIINNPKTAKILRVLSYYHSNR-----CLHGRLNPYQALINLSDYTVKI---  136 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~qil~~L~~lH~~~-----i~H~Dikp~Nil~~~~~~~~~~---  136 (246)
                      .++||||+++++|.+++....       ......+..|++.||.|||++|     |+||||||+||+++.++ ..++   
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~-~~kl~df  160 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDF  160 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS-CEEECCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC-CEEEecC
Confidence            999999999999999997532       1122333449999999999999     99999999999999666 3333   


Q ss_pred             ------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcC
Q 036362          137 ------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       137 ------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                          +|+||+|+++++|++|..||...........+...  ...    
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~~----  234 (279)
T 2w5a_A          161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFR----  234 (279)
T ss_dssp             CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCC----
T ss_pred             chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc--ccc----
Confidence                                                45999999999999999999887655444444331  100    


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                            .....+++++.+++.+||..||.+|||+.|+++|+|+.+-.
T Consensus       235 ----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          235 ----------------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             ----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             ----------------------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence                                  01246789999999999999999999999999999998753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=9.2e-41  Score=272.47  Aligned_cols=209  Identities=16%  Similarity=0.218  Sum_probs=165.2

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC----CcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG----VPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|++.+.||+|+||.||+|++.. +  +..||+|.......    ....+.+|+.+++.++||||+++    ...+..++
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVR-N--SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEcc-C--CeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            48899999999999999999876 5  78899998322211    23467899999999999999998    55678999


Q ss_pred             EEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ||||++ |+|.+++....    ......+..|++.||.|||++||+||||||+|||++.++ ..++              
T Consensus       132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kL~DfG~a~~~~~~~~  209 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-LVKLGDFGSASIMAPANS  209 (348)
T ss_dssp             EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-EEEECCCTTCBSSSSBCC
T ss_pred             EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-CEEEeeccCceecCCCCc
Confidence            999999 78888875432    122233444999999999999999999999999999765 2222              


Q ss_pred             ------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              +|+|||||++++|++|..||...+.......+.... .+.                
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~-~~~----------------  272 (348)
T 1u5q_A          210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPA----------------  272 (348)
T ss_dssp             CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCC----------------
T ss_pred             ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCC----------------
Confidence                                    469999999999999999998877665555444411 000                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                .....+++.+.+|+.+||..||.+|||+.++++||||....
T Consensus       273 ----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          273 ----------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             ----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             ----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence                      00135789999999999999999999999999999997653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=7.4e-41  Score=275.46  Aligned_cols=215  Identities=10%  Similarity=0.061  Sum_probs=149.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhhcccccC--CCCceEEe----c-----
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKISPLKEM--DYPLIFRK----E-----   67 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l--~~~~i~~~----~-----   67 (246)
                      +|++.+.||+|+||.||+|++.. +  ++.||+|+.....    .....+.+|+.+++.+  +||||+++    .     
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVE-R--LEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECC-C--CceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence            48999999999999999999987 5  7889999833322    2344566774444444  69998874    1     


Q ss_pred             ----C---------------CceEEEEEeccCcccHHHHHhhhc---ccccc------hHH-HHHHHHHHHHhhCceeec
Q 036362           68 ----N---------------DKLVYQIFEYTGLLNLRKVIKNFL---DIINN------PKT-AKILRVLSYYHSNRCLHG  118 (246)
Q Consensus        68 ----~---------------~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~------~~~-~qil~~L~~lH~~~i~H~  118 (246)
                          .               ....++||||++ ++|.+++....   .....      ..+ .||+.||.|||++||+||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr  218 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG  218 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence                0               045899999999 99999997632   22222      233 599999999999999999


Q ss_pred             cCCCCCeEEecCCCeeeEE--------------------------------------EeehhhHHHHHHhhCCCCCCCCc
Q 036362          119 RLNPYQALINLSDYTVKIA--------------------------------------RLISVGCIFAEMVIQEPLSEDAS  160 (246)
Q Consensus       119 Dikp~Nil~~~~~~~~~~~--------------------------------------Di~slG~i~~~l~~g~~~~~~~~  160 (246)
                      ||||+|||++.++ ..+++                                      |+||+||++++|++|+.||....
T Consensus       219 Dikp~NIll~~~~-~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  297 (371)
T 3q60_A          219 HFTPDNLFIMPDG-RLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT  297 (371)
T ss_dssp             TCSGGGEEECTTS-CEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred             cCCHHHEEECCCC-CEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence            9999999999776 34444                                      49999999999999999998653


Q ss_pred             chHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          161 ESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                      ....             ..+.....       .............+.+++.+.+|+.+||..||++|||+.|+++||||+
T Consensus       298 ~~~~-------------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          298 PGIK-------------GSWKRPSL-------RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             TTCT-------------TCCCBCCT-------TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             cccc-------------cchhhhhh-------hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence            2100             00000000       000000001111257899999999999999999999999999999998


Q ss_pred             CC
Q 036362          241 DV  242 (246)
Q Consensus       241 ~~  242 (246)
                      ++
T Consensus       358 ~~  359 (371)
T 3q60_A          358 QL  359 (371)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.3e-40  Score=261.61  Aligned_cols=212  Identities=17%  Similarity=0.243  Sum_probs=160.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      +|.....||+|+||.||+|.+.. +  +..||+|.. .........+.+|+.+++.++||||+++    ...+..++|||
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   99 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLS-N--QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME   99 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETT-T--CCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECC-C--CeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence            45555699999999999999977 5  778999983 2334446778999999999999999998    55678999999


Q ss_pred             ccCcccHHHHHhhhcc-ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------------
Q 036362           78 YTGLLNLRKVIKNFLD-IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~-~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      |+++++|.+++..... ...     ..+..|++.||.|||++||+||||||+||+++..+...+                
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~  179 (295)
T 2clq_A          100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC  179 (295)
T ss_dssp             CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred             eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence            9999999999976421 122     223449999999999999999999999999986331222                


Q ss_pred             -------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          136 -------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       136 -------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                               .+|+||||+++++|++|..||....................              
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------  245 (295)
T 2clq_A          180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP--------------  245 (295)
T ss_dssp             -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCC--------------
T ss_pred             ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccc--------------
Confidence                                     34599999999999999999976544332211111111100              


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                  ..+..+++++.+|+.+||..||++|||+.++++||||+...
T Consensus       246 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          246 ------------EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             ------------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             ------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence                        11246789999999999999999999999999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=274.18  Aligned_cols=229  Identities=10%  Similarity=0.048  Sum_probs=160.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..  ........+.+|+.+++.++||||+++      ......+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKK-T--GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECC-C--CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            479999999999999999999987 5  7789999832  222345677899999999999999988      2345889


Q ss_pred             EEEeccCcccHHHHHhhhcc------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEE----ecCC------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALI----NLSD------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~----~~~~------------  131 (246)
                      +||||+++++|.+++.....      .....+..||+.||.|||++||+||||||+|||+    +.++            
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            99999999999999976432      2222334499999999999999999999999998    3222            


Q ss_pred             ----------------Cee-----------------eEEEeehhhHHHHHHhhCCCCCCCCcc----hHHHHHHHHhhCC
Q 036362          132 ----------------YTV-----------------KIARLISVGCIFAEMVIQEPLSEDASE----SRERISIFRLMGE  174 (246)
Q Consensus       132 ----------------~~~-----------------~~~Di~slG~i~~~l~~g~~~~~~~~~----~~~~~~~~~~~~~  174 (246)
                                      .+|                 ..+|+||+||++++|++|..||.....    ......+..   .
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---~  242 (319)
T 4euu_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT---G  242 (319)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH---H
T ss_pred             cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc---C
Confidence                            011                 135799999999999999999975333    222333322   2


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCC
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH  237 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~  237 (246)
                      .+...+................. .......+.+++.+.+|+++||+.||++|||++|+|+||
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDM-PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSC-CTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             CCcccchhhhcccCCccccCccC-CcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            22222111111100000000000 000011234567899999999999999999999999987

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=5.2e-41  Score=266.96  Aligned_cols=207  Identities=13%  Similarity=0.067  Sum_probs=160.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCc----chhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVP----ISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+........    ..+.+|+.++..++||||+++    ...+..|
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTA-L--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETT-T--TEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecC-C--CceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            579999999999999999999977 5  7889999843333322    678999999999999999988    5567899


Q ss_pred             EEEeccCcccHHHHHhhhc-ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------EEee
Q 036362           74 QIFEYTGLLNLRKVIKNFL-DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------ARLI  140 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------~Di~  140 (246)
                      +||||++|++|.+++.... ......+..|++.||.|||++||+||||||+|||++.++ ..++            +|+|
T Consensus       108 lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g-~~kl~~~~~~~~~~~~~Di~  186 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG-DVVLAYPATMPDANPQDDIR  186 (286)
T ss_dssp             EEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS-CEEECSCCCCTTCCHHHHHH
T ss_pred             EEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC-CEEEEeccccCCCCchhHHH
Confidence            9999999999999996532 112233444999999999999999999999999999776 3333            5799


Q ss_pred             hhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhh
Q 036362          141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKML  220 (246)
Q Consensus       141 slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l  220 (246)
                      ||||++++|++|+.||.+.+......                      .................+.+++++.+|+.+||
T Consensus       187 slG~il~elltg~~Pf~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          187 GIGASLYALLVNRWPLPEAGVRSGLA----------------------PAERDTAGQPIEPADIDRDIPFQISAVAARSV  244 (286)
T ss_dssp             HHHHHHHHHHHSEECSCCCSBCCCSE----------------------ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCcchhhH----------------------HHHHHhccCCCChhhcccCCCHHHHHHHHHHc
Confidence            99999999999999998654321000                      00000011112223345678999999999999


Q ss_pred             hcCCCCCCCHHHHhc
Q 036362          221 RVNPKERITVNDALN  235 (246)
Q Consensus       221 ~~dp~~R~s~~e~l~  235 (246)
                      +.||.+| |+.|+++
T Consensus       245 ~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          245 QGDGGIR-SASTLLN  258 (286)
T ss_dssp             CTTSSCC-CHHHHHH
T ss_pred             ccCCccC-CHHHHHH
Confidence            9999999 9999885

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.9e-41  Score=277.82  Aligned_cols=238  Identities=22%  Similarity=0.294  Sum_probs=169.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----------CCceEEe----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----------YPLIFRK----   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----------~~~i~~~----   66 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..........+.+|+.+++.++           |+||+++    
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMV-N--NTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecC-C--CcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            589999999999999999999877 5  788999984433334567888999998886           7899887    


Q ss_pred             ----cCCceEEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCC-----
Q 036362           67 ----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSD-----  131 (246)
Q Consensus        67 ----~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~-----  131 (246)
                          ......+++||++ +++|.+++.......+.     .+..||+.||.|||++ ||+||||||+|||++.++     
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCc
Confidence                1234889999999 59999999764333333     3344999999999998 999999999999996432     


Q ss_pred             CeeeEE------------------------------------EeehhhHHHHHHhhCCCCCCCCc------chHHHHHHH
Q 036362          132 YTVKIA------------------------------------RLISVGCIFAEMVIQEPLSEDAS------ESRERISIF  169 (246)
Q Consensus       132 ~~~~~~------------------------------------Di~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~  169 (246)
                      ...+++                                    |+|||||++++|++|..||....      .......+.
T Consensus       175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII  254 (373)
T ss_dssp             EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred             ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence            123343                                    49999999999999999998654      345666777


Q ss_pred             HhhCCCCcCcCCCCCCccccc---------cccCCCCcch-hh---hhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          170 RLMGEPSEETLPGVTTFFPFI---------YCYEESEPKD-LA---ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~---~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ..+|.++...+........+.         .....+.... ..   ......++++.+||.+||+.||.+|||+.|+|+|
T Consensus       255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            777776554321111000000         0000000000 00   1112356789999999999999999999999999


Q ss_pred             CCCcCCC
Q 036362          237 HYYRDVV  243 (246)
Q Consensus       237 ~~~~~~~  243 (246)
                      |||++..
T Consensus       335 p~f~~~~  341 (373)
T 1q8y_A          335 PWLKDTL  341 (373)
T ss_dssp             GGGTTCT
T ss_pred             hhhhccc
Confidence            9999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.4e-40  Score=271.45  Aligned_cols=226  Identities=20%  Similarity=0.210  Sum_probs=165.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCc--------------chhhhhhcccccCCCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVP--------------ISILTKISPLKEMDYPLI   63 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~--------------~~~~~E~~~l~~l~~~~i   63 (246)
                      ++|++.+.||+|+||.||+|.+ .    ++.||+|.....    ....              ..+.+|+.+++.++||||
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-D----NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-T----TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-C----CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            6899999999999999999998 3    778999982111    1111              788999999999999999


Q ss_pred             EEe----cCCceEEEEEeccCcccHHHH------Hhhhcccccch-----HHHHHHHHHHHHhh-CceeeccCCCCCeEE
Q 036362           64 FRK----ENDKLVYQIFEYTGLLNLRKV------IKNFLDIINNP-----KTAKILRVLSYYHS-NRCLHGRLNPYQALI  127 (246)
Q Consensus        64 ~~~----~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~~-----~~~qil~~L~~lH~-~~i~H~Dikp~Nil~  127 (246)
                      +++    ...+..++||||+++++|.++      +.......+..     +..|++.||.|||+ +||+||||||+||++
T Consensus       106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM  185 (348)
T ss_dssp             CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEE
T ss_pred             ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEE
Confidence            998    567899999999999999998      54422223332     33499999999999 999999999999999


Q ss_pred             ecCCCeee---------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcc-hHHHHH
Q 036362          128 NLSDYTVK---------------------------------------IARLISVGCIFAEMVIQEPLSEDASE-SRERIS  167 (246)
Q Consensus       128 ~~~~~~~~---------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~  167 (246)
                      +.++ ..+                                       .+|+||+||++++|++|..||..... ......
T Consensus       186 ~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  264 (348)
T 2pml_X          186 DKNG-RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN  264 (348)
T ss_dssp             CTTS-CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred             cCCC-cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence            8765 111                                       46799999999999999999987766 333333


Q ss_pred             HHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          168 IFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      +... ..+.+.....      +   ...............+++++.+|+.+||+.||.+|||+.|+++||||++.+
T Consensus       265 i~~~-~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          265 IRTK-NIEYPLDRNH------F---LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             HTSC-CCCCCCSSSS------S---TTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             Hhcc-CcCCccchhh------h---hccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            3221 1111110000      0   000011111222357899999999999999999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=4.4e-40  Score=263.66  Aligned_cols=209  Identities=22%  Similarity=0.294  Sum_probs=167.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +.|++.+.||+|+||.||+|.+.. +  ++.||+|+..  ........+.+|+.+++.++||||+++    ......++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   98 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNR-T--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   98 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECC-C--CcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            469999999999999999999876 5  7789999832  223445788999999999999999988    456789999


Q ss_pred             EeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           76 FEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |||+++++|.+++....  ......+..|++.||.|||++||+||||||+||+++.++ ..++                 
T Consensus        99 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~  177 (303)
T 3a7i_A           99 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRN  177 (303)
T ss_dssp             EECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECBTTBCCBC
T ss_pred             EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC-CEEEeecccceecCccccccC
Confidence            99999999999987532  222233444999999999999999999999999998765 2333                 


Q ss_pred             ----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          137 ----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       137 ----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                            +|+||||+++++|++|..||...........+...  .+.                  
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~------------------  237 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN--NPP------------------  237 (303)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCC------------------
T ss_pred             ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC--CCC------------------
Confidence                                  35999999999999999999876655444333321  100                  


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                              .....+++.+.+|+.+||..||.+|||+.|+++||||...
T Consensus       238 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          238 --------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             --------CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             --------CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence                    0124678999999999999999999999999999999653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.6e-40  Score=267.28  Aligned_cols=214  Identities=14%  Similarity=0.161  Sum_probs=154.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe----cCCce---
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK----ENDKL---   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~---   71 (246)
                      ++|++.+.||+|+||.||+|++..+......||+|....   .......+.+|+.+++.++||||+++    .....   
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            579999999999999999999876331123789998322   23345678899999999999999987    22222   


Q ss_pred             ---EEEEEeccCcccHHHHHhhhc---------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE--
Q 036362           72 ---VYQIFEYTGLLNLRKVIKNFL---------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA--  137 (246)
Q Consensus        72 ---~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~--  137 (246)
                         .+++|||+++++|.+++....         ......+..|++.||.|||++||+||||||+|||++.++ ..+++  
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~-~~kl~Df  181 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM-TVCVADF  181 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-CEEECCC
T ss_pred             CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC-CEEEeec
Confidence               389999999999999986532         112223344999999999999999999999999999765 33333  


Q ss_pred             ---------------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCc
Q 036362          138 ---------------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSE  177 (246)
Q Consensus       138 ---------------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~  177 (246)
                                                             |+||+||++++|++ |..||.+.........+......+  
T Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~--  259 (323)
T 3qup_A          182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK--  259 (323)
T ss_dssp             CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC--
T ss_pred             cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCC--
Confidence                                                   49999999999999 999999877766655554421100  


Q ss_pred             CcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-------HHHHhcCCCCcCCCC
Q 036362          178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-------VNDALNHHYYRDVVS  244 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-------~~e~l~h~~~~~~~~  244 (246)
                                                ....+++++.+|+.+||+.||.+|||       .+++++|||+.....
T Consensus       260 --------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~  307 (323)
T 3qup_A          260 --------------------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ  307 (323)
T ss_dssp             --------------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred             --------------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence                                      12467899999999999999999999       778899999987543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.1e-40  Score=265.38  Aligned_cols=210  Identities=18%  Similarity=0.204  Sum_probs=157.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---CcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|.......   ....+.++...++.++||||+++    ...+..++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVP-S--GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecC-C--CeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence            689999999999999999999977 5  78899998322211   12233344455788899999988    56778999


Q ss_pred             EEeccCcccHHHHHhhh--cccccc-----hHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCC---------------
Q 036362           75 IFEYTGLLNLRKVIKNF--LDIINN-----PKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~--~~~~~~-----~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      ||||++ ++|.+++...  ....++     .+..|++.||.|||++ ||+||||||+||+++.++               
T Consensus        84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  162 (290)
T 3fme_A           84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD  162 (290)
T ss_dssp             EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred             EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence            999999 6998887542  112232     3444999999999998 999999999999999765               


Q ss_pred             -------------Ceee-------------EEEeehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 -------------YTVK-------------IARLISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 -------------~~~~-------------~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                   .+|+             .+|+||+||++++|++|..||..... .......... ..+..       
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~-------  234 (290)
T 3fme_A          163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE-PSPQL-------  234 (290)
T ss_dssp             -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHS-CCCCC-------
T ss_pred             cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhcc-CCCCc-------
Confidence                         1111             24699999999999999999986433 2233332221 10000       


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                         ....+++++.+|+.+||+.||.+|||+.|+++||||+..
T Consensus       235 -------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          235 -------------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             -------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -------------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence                               013578999999999999999999999999999999753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.4e-41  Score=280.39  Aligned_cols=203  Identities=11%  Similarity=0.120  Sum_probs=153.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhh---cccccCCCCceEEe--------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKI---SPLKEMDYPLIFRK--------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~---~~l~~l~~~~i~~~--------   66 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+.    .........+.+|+   ..++.++||||+++        
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQE-T--GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-C-C--CCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred             ceEEEcceeecCCCEEEEEEEECC-C--CcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence            468999999999999999999876 5  788999983    22333456788999   66666789999865        


Q ss_pred             ---cCCc-----------------eEEEEEeccCcccHHHHHhhhc---c-------cccchHHHHHHHHHHHHhhCcee
Q 036362           67 ---ENDK-----------------LVYQIFEYTGLLNLRKVIKNFL---D-------IINNPKTAKILRVLSYYHSNRCL  116 (246)
Q Consensus        67 ---~~~~-----------------~~~lv~e~~~~~~L~~~~~~~~---~-------~~~~~~~~qil~~L~~lH~~~i~  116 (246)
                         ...+                 ..+++|||++ |+|.+++....   +       .....++.||+.||.|||++||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  228 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  228 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence               1111                 3889999996 89999997642   1       11122445999999999999999


Q ss_pred             eccCCCCCeEEecCCCee----------------------------------------------eEEEeehhhHHHHHHh
Q 036362          117 HGRLNPYQALINLSDYTV----------------------------------------------KIARLISVGCIFAEMV  150 (246)
Q Consensus       117 H~Dikp~Nil~~~~~~~~----------------------------------------------~~~Di~slG~i~~~l~  150 (246)
                      ||||||+|||++.++ ..                                              ..+|+|||||++++|+
T Consensus       229 HrDikp~NIll~~~~-~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell  307 (377)
T 3byv_A          229 HTYLRPVDIVLDQRG-GVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW  307 (377)
T ss_dssp             CSCCCGGGEEECTTC-CEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCCC-CEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence            999999999999766 11                                              2357999999999999


Q ss_pred             hCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCH
Q 036362          151 IQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITV  230 (246)
Q Consensus       151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~  230 (246)
                      +|+.||..........                                 ......+.+++++.+|+.+||+.||.+|||+
T Consensus       308 tg~~Pf~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~  354 (377)
T 3byv_A          308 CADLPITKDAALGGSE---------------------------------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLP  354 (377)
T ss_dssp             HSSCCC------CCSG---------------------------------GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCH
T ss_pred             HCCCCCcccccccchh---------------------------------hhhhhccCCCHHHHHHHHHHcCCCchhCCCH
Confidence            9999996543211000                                 0001125789999999999999999999999


Q ss_pred             HHHhcCCCCcCC
Q 036362          231 NDALNHHYYRDV  242 (246)
Q Consensus       231 ~e~l~h~~~~~~  242 (246)
                      .|+++||||+++
T Consensus       355 ~e~l~hp~f~~~  366 (377)
T 3byv_A          355 LQAMETPEYEQL  366 (377)
T ss_dssp             HHHHTSHHHHHH
T ss_pred             HHHhhChHHHHH
Confidence            999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.5e-40  Score=257.74  Aligned_cols=202  Identities=13%  Similarity=0.105  Sum_probs=163.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|.+..    +..||+|+..........+.+|+.+++.++||||+++    ...+..++|||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLN----KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT----TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             hhceeeheecCCCccEEEEEEecC----CCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            579999999999999999999876    5568999855555556789999999999999999998    56678999999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++                 
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~  164 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSS  164 (269)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG-CEEECCTTGGGGBCCHHHHST
T ss_pred             eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCC-CEEeccccccccccccccccc
Confidence            9999999999965321    12223344999999999999999999999999998665 3333                 


Q ss_pred             -----------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                             +|+||+|+++++|++ |..||...........+.......                 
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------  227 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-----------------  227 (269)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-----------------
T ss_pred             cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCC-----------------
Confidence                                   359999999999999 999998877665555444321110                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 .+...++.+.+++.+||+.||.+|||+.++++|
T Consensus       228 -----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          228 -----------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                       013568999999999999999999999999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=9.5e-40  Score=264.27  Aligned_cols=205  Identities=16%  Similarity=0.122  Sum_probs=162.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|.+..+...+..||+|....  .......+.+|+.+++.++||||+++    ...+..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            579999999999999999999976332345699998332  22234578899999999999999998    556789999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++++|.+++....    ......+..|++.||.|||++||+||||||+|||++.++ ..++               
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCCSSCEECC----C
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCC-CEEECCCCcccccccCccc
Confidence            99999999999996532    112223344999999999999999999999999998765 2333               


Q ss_pred             ---------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 +|+||+||++++|++ |..||...........+......+             
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~-------------  274 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP-------------  274 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC-------------
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC-------------
Confidence                                       359999999999998 999998877766555554421111             


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     ....+++++.+|+.+||..||.+|||+.++++
T Consensus       275 ---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          275 ---------------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                           11467899999999999999999999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.9e-39  Score=255.58  Aligned_cols=202  Identities=12%  Similarity=0.087  Sum_probs=163.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|.+..    +..||+|...........+.+|+.+++.++||||+++    ...+..++|||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKG----QYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT----TEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             hheeeeeeeccCCCceEEEEEecC----ceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            589999999999999999998875    5568999855555556789999999999999999998    56778999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |+++++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++ ..++                 
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-~~~l~Dfg~~~~~~~~~~~~~  162 (268)
T 3sxs_A           84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL-CVKVSDFGMTRYVLDDQYVSS  162 (268)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTC-CEEECCTTCEEECCTTCEEEC
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCC-CEEEccCccceecchhhhhcc
Confidence            999999999997642    222233344999999999999999999999999998766 2333                 


Q ss_pred             -----------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                             +|+||+|+++++|++ |..||...........+.......                 
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------  225 (268)
T 3sxs_A          163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY-----------------  225 (268)
T ss_dssp             CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC-----------------
T ss_pred             cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCC-----------------
Confidence                                   359999999999998 999998777665544443311100                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 .+...++.+.+++.+||+.||.+|||+.|+++|
T Consensus       226 -----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          226 -----------RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             -----------CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                       013468899999999999999999999999976

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.5e-40  Score=266.77  Aligned_cols=208  Identities=19%  Similarity=0.249  Sum_probs=157.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---CcchhhhhhcccccCCC--CceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKEMDY--PLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~--~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+..    ++.||+|.......   ....+.+|+.+++.++|  +||+++    ......
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~   84 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEK----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI   84 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTT----SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCC----CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence            469999999999999999998854    67899998322222   23567899999999976  999988    567899


Q ss_pred             EEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++|||+. +++|.+++.....   .....+..||+.||.|||++||+||||||+|||++ ++                  
T Consensus        85 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~  162 (343)
T 3dbq_A           85 YMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT  162 (343)
T ss_dssp             EEEECCC-SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred             EEEEeCC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence            9999955 5999999976421   12233444999999999999999999999999997 33                  


Q ss_pred             -------------Ceee--------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          132 -------------YTVK--------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       132 -------------~~~~--------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                   .+|+                    .+|+||+||++++|++|+.||.......  .............
T Consensus       163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~  240 (343)
T 3dbq_A          163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHAIIDPNHEI  240 (343)
T ss_dssp             -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHHHHHHCTTSCC
T ss_pred             cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH--HHHHHHhcCCccc
Confidence                         1111                    2579999999999999999997644321  1122221111100


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                                              ..+...++++.+|+.+||..||.+|||+.|+++||||+.
T Consensus       241 ------------------------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          241 ------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             ------------------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             ------------------------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence                                    011345788999999999999999999999999999975

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=272.30  Aligned_cols=210  Identities=12%  Similarity=0.096  Sum_probs=163.2

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|+....  ...+..||+|....  .......+.+|+.+++.++||||+++    ......+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            5799999999999999999996431  11266899998322  22234468899999999999999998    5667889


Q ss_pred             EEEeccCcccHHHHHhhhcc-----cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEEE---
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-----IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIAR---  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-----~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~D---  138 (246)
                      +||||+++++|.+++.....     ..+.     .+..||+.||.|||++||+||||||+|||++.++  ...+++|   
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~  230 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  230 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence            99999999999999976431     1122     2444999999999999999999999999998544  1244444   


Q ss_pred             --------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          139 --------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       139 --------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                            +|||||++++|++ |..||...........+......+    
T Consensus       231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~----  306 (367)
T 3l9p_A          231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD----  306 (367)
T ss_dssp             HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC----
T ss_pred             ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----
Confidence                                                  9999999999998 999998877665555444421110    


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                              ....+++.+.+|+.+||+.||.+|||+.++++|.++
T Consensus       307 ------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          307 ------------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             ------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------------------------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence                                    114678999999999999999999999999988654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=8.3e-40  Score=261.09  Aligned_cols=210  Identities=20%  Similarity=0.273  Sum_probs=163.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..||+|.....    ......+.+|+.+++.++||||+++    ...+..+
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTI-L--NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-T--CSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECC-C--CCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence            589999999999999999999877 5  778999983221    1223578899999999999999998    6678899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      +||||++|++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++ ..++              
T Consensus        88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK-TLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEECCCSSSTTC-----
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-CEEEEeCCCccccccccc
Confidence            9999999999999997643   222333444999999999999999999999999998666 2333              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                +|+||+|+++++|++|+.||.+.............  .                
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~--~----------------  228 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD--S----------------  228 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSS--C----------------
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhc--c----------------
Confidence                                      45999999999999999999887665443333221  0                


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                            .........+.+++.+.+++.+||+.||.+||+..+.+.++|.
T Consensus       229 ------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          229 ------VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             ------CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             ------CCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence                  0111122335789999999999999999999966665555543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.6e-39  Score=256.68  Aligned_cols=202  Identities=13%  Similarity=0.104  Sum_probs=161.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++++.||+|+||.||+|.+..    +..||+|+..........+.+|+.+++.++||||+++    ...+..++|||
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           24 KDLTFLKELGTGQFGVVKYGKWRG----QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             GGEEEEEECC---CEEEEEEEETT----TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             HHHHhHhhcCCCCCceEEEEEEcC----CCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            589999999999999999998875    5578999855555556789999999999999999988    56778999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |+++++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++ ..++                 
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~-~~kl~Dfg~~~~~~~~~~~~~  178 (283)
T 3gen_A          100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSRYVLDDEYTSS  178 (283)
T ss_dssp             CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS-CEEECSTTGGGGBCCHHHHST
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC-CEEEccccccccccccccccc
Confidence            999999999997632    122233344999999999999999999999999998765 3333                 


Q ss_pred             -----------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                             +|+||+|+++++|++ |..||...........+........                
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~----------------  242 (283)
T 3gen_A          179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------  242 (283)
T ss_dssp             TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC----------------
T ss_pred             cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC----------------
Confidence                                   359999999999998 9999988776655555444211110                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                  +...++.+.+|+.+||..||.+|||+.++++|
T Consensus       243 ------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          243 ------------PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             ------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                        13568899999999999999999999999976

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.8e-40  Score=265.01  Aligned_cols=204  Identities=21%  Similarity=0.285  Sum_probs=161.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-------CCcchhhhhhcccccCC--CCceEEe----cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-------GVPISILTKISPLKEMD--YPLIFRK----EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~--~~~i~~~----~~   68 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|......       .....+.+|+.+++.++  |+||+++    ..
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVS-D--NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETT-T--TEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CceEEEEEEeeCCCeEEEEEEECC-C--CcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            579999999999999999999877 5  7889999822111       23467888999999996  5999987    56


Q ss_pred             CceEEEEEeccCc-ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-------
Q 036362           69 DKLVYQIFEYTGL-LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-------  137 (246)
Q Consensus        69 ~~~~~lv~e~~~~-~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-------  137 (246)
                      .+..++++|++.+ ++|.+++....   ......+..||+.||.|||++||+||||||+|||++.+....+++       
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~  199 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  199 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence            7889999999975 89999987642   222233444999999999999999999999999998433233333       


Q ss_pred             -------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          138 -------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       138 -------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                     |+|||||++++|++|..||.....      +..  +..           
T Consensus       200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~--~~~-----------  260 (320)
T 3a99_A          200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIR--GQV-----------  260 (320)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--CCC-----------
T ss_pred             cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhc--ccc-----------
Confidence                                           599999999999999999975422      111  000           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                      .....+++++.+|+.+||..||.+|||+.|+++||||+++.
T Consensus       261 ----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          261 ----------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             ----------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             ----------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence                            01146789999999999999999999999999999999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=9e-40  Score=265.57  Aligned_cols=213  Identities=16%  Similarity=0.180  Sum_probs=150.5

Q ss_pred             CCcccee-eeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhc-ccccCCCCceEEe--------cCCce
Q 036362            2 EKYRKVE-LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKIS-PLKEMDYPLIFRK--------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~-~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~--------~~~~~   71 (246)
                      ++|++.+ .||+|+||.||+|.+.. +  ++.||+|+...    .....+|+. .++.++||||+++        .....
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRR-T--GQKCALKLLYD----SPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEES----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECC-C--CCEEEEEEecC----cHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            5799865 69999999999999987 5  78899998322    123333433 4566689999887        12556


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEE-------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIA-------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~-------  137 (246)
                      .++||||+++++|.+++.......+..     +..||+.||.|||++||+||||||+||+++.++  ...+++       
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            899999999999999997654333333     334999999999999999999999999997543  113333       


Q ss_pred             ------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          138 ------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       138 ------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                    |+||+||++++|++|..||...................            
T Consensus       181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------  248 (336)
T 3fhr_A          181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG------------  248 (336)
T ss_dssp             C----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------------
T ss_pred             ccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc------------
Confidence                                          59999999999999999997654332111111100000            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                               ........+..+++++.+|+.+||+.||.+|||+.|+++||||++.
T Consensus       249 ---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          249 ---------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             -----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             ---------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence                     0000001124689999999999999999999999999999999874

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=6.9e-40  Score=263.28  Aligned_cols=208  Identities=15%  Similarity=0.169  Sum_probs=161.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC---CcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||+||+|++.     +..||+|+......   ....+.+|+.++++++||||+++    ......++
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEWH-----GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-----TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             hHceeeeEeecCCCeEEEEEEEC-----CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            58999999999999999999874     44688998332222   23467899999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhc------ccccchHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCCeeeE----------
Q 036362           75 IFEYTGLLNLRKVIKNFL------DIINNPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDYTVKI----------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~------~~~~~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~~~~~----------  136 (246)
                      ||||+++++|.+++....      ......+..|++.||.|||++|  |+||||||+||+++.++ ..++          
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~-~~kL~Dfg~a~~~~  190 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSRLKA  190 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC-CEEECCCC------
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC-cEEECCCCCCcccc
Confidence            999999999999997532      1122233449999999999999  99999999999999765 3333          


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+||+||++++|++|..||...+.......+......+            
T Consensus       191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~------------  258 (309)
T 3p86_A          191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL------------  258 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC------------
T ss_pred             ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------
Confidence                                         349999999999999999998876655444433211100            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc--CCCCcCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN--HHYYRDV  242 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~--h~~~~~~  242 (246)
                                     ..+..+++++.+|+.+||+.||.+|||+.++++  +++++..
T Consensus       259 ---------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          259 ---------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             ---------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             ---------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence                           112568899999999999999999999999987  5666654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=3.1e-39  Score=266.26  Aligned_cols=202  Identities=17%  Similarity=0.190  Sum_probs=160.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..||+|.....  ......+.+|+.+++.++||||+++    ...+..++|
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRA-D--NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             HHeEEeeEeccCCCCeEEEEEEec-C--CeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence            578999999999999999999986 5  778999983222  1223578899999999999999998    556789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++++|.+++.....    .....+..|++.||.|||++||+||||||+|||++.++ ..++               
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~-~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN-VLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCGGGCEECTTSEEE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC-cEEECcCCCceecCCCcee
Confidence            999999999999975421    12223344999999999999999999999999998766 3333               


Q ss_pred             --------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 --------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                +|+|||||+++||++ |..||...........+......+              
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------  335 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP--------------  335 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCC--------------
T ss_pred             ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence                                      349999999999998 999998876655444333311100              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                    .+..+++++.+|+.+||+.||.+|||+.++++
T Consensus       336 --------------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          336 --------------CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             --------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                          12457889999999999999999999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.1e-39  Score=257.07  Aligned_cols=206  Identities=19%  Similarity=0.202  Sum_probs=160.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+..+...+..||+|....  .......+.+|+.+++.++||||+++   ...+..++||
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~   94 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM   94 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEE
Confidence            589999999999999999999865332255688888322  22234578899999999999999998   4556789999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------------  136 (246)
                      ||+++++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++ ..++                
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~  173 (281)
T 1mp8_A           95 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYK  173 (281)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-EEEECC--------------
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCC-CEEECccccccccCcccccc
Confidence            9999999999997532    112223344999999999999999999999999999766 2333                


Q ss_pred             ------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                              +|+||+||++++|++ |..||.+.........+......                 
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~-----------------  236 (281)
T 1mp8_A          174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL-----------------  236 (281)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-----------------
T ss_pred             cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC-----------------
Confidence                                    359999999999996 99999887766555544431100                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 ..++.+++++.+++.+||..||.+|||+.|++++
T Consensus       237 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          237 -----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                       0124678999999999999999999999999864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=3.7e-39  Score=271.83  Aligned_cols=201  Identities=16%  Similarity=0.168  Sum_probs=163.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|+||.||+|.+..    +..||+|...........+.+|+.+++.++||||+++   ...+..++||||
T Consensus       188 ~~~~~~~~lG~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~  263 (454)
T 1qcf_A          188 ESLKLEKKLGAGQFGEVWMATYNK----HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF  263 (454)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETT----TEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             HHeEEEEEcccCCceEEEEEEECC----ccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEee
Confidence            578999999999999999999875    5578999854444557789999999999999999998   456789999999


Q ss_pred             cCcccHHHHHhhhcccc-----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE----------------
Q 036362           79 TGLLNLRKVIKNFLDII-----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA----------------  137 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~-----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~----------------  137 (246)
                      +++++|.+++.......     +..+..||+.||.|||++||+||||||+|||++.++ ..+++                
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-~~kl~DFG~a~~~~~~~~~~~  342 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAR  342 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC-CEEECSTTGGGGBCCHHHHTT
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCC-cEEEeeCCCceEcCCCceecc
Confidence            99999999997542212     223444999999999999999999999999999765 34444                


Q ss_pred             ------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          138 ------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       138 ------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              |+|||||++++|++ |+.||.+....+....+......+.                
T Consensus       343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~----------------  406 (454)
T 1qcf_A          343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR----------------  406 (454)
T ss_dssp             CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCC----------------
T ss_pred             CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----------------
Confidence                                    49999999999999 9999998777666555554211111                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  +..+++++.+|+.+||..||.+|||+.++++
T Consensus       407 ------------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          407 ------------PENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                        1467899999999999999999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.5e-39  Score=267.41  Aligned_cols=206  Identities=17%  Similarity=0.163  Sum_probs=160.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccc----ccchhhhhhccccCC--CCCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA----ENAYQTVLLKADIIP--DGVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++...    ...+..||+|.....  ......+.+|+.+++.+ +||||+++    ...+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            5799999999999999999987531    112557899983222  22245688999999999 89999998    5677


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..|+||||+++++|.+++.....              ..+.     .++.||+.||.|||++||+||||||+|||++.++
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  240 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN  240 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCC
Confidence            89999999999999999976431              1122     2344999999999999999999999999998766


Q ss_pred             CeeeEE-----------------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVKIA-----------------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~~~-----------------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       ..+++                                         |+|||||++++|++ |..||.+.........+.
T Consensus       241 -~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~  319 (370)
T 2psq_A          241 -VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK  319 (370)
T ss_dssp             -CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred             -CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence             34444                                         49999999999998 999998776655544433


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .....                            ..+..+++++.+|+.+||..||.+|||+.|++++
T Consensus       320 ~~~~~----------------------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          320 EGHRM----------------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             TTCCC----------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCC----------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            31100                            0124678999999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=3.7e-39  Score=256.39  Aligned_cols=202  Identities=15%  Similarity=0.155  Sum_probs=165.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..||+|...........+.+|+.+++.++||||+++    ...+..++|||
T Consensus        13 ~~~~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           13 TDITMKHKLGGGQYGEVYEGVWKK-Y--SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             GGEEEEEESGGGTTCSEEEEEEGG-G--TEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cceeEEeecCCCCceeEEEeEecC-C--CEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            579999999999999999999987 6  7889999855555566789999999999999999988    56778999999


Q ss_pred             ccCcccHHHHHhhhcccccchH-----HHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNPK-----TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~-----~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------------  136 (246)
                      |+++++|.+++.......+...     ..|++.||.|||++||+||||||+||+++.++ ..++                
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-~~~l~Dfg~~~~~~~~~~~~  168 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTA  168 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG-CEEECCCCGGGTSCSSSSEE
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC-CEEEccCccceeccCCcccc
Confidence            9999999999976443333333     33999999999999999999999999998665 2333                


Q ss_pred             ------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                              +|+||+|+++++|++ |..||...+.......+......+                
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~----------------  232 (288)
T 3kfa_A          169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME----------------  232 (288)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC----------------
T ss_pred             ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC----------------
Confidence                                    359999999999999 999998776655444443321110                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  .+..+++.+.+|+.+||..||.+|||+.++++
T Consensus       233 ------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          233 ------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             ------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                        11467899999999999999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=6.1e-39  Score=273.06  Aligned_cols=202  Identities=16%  Similarity=0.155  Sum_probs=164.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..||+|...........+.+|+.+++.++||||+++    ......++|||
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKK-Y--SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGG-G--TEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHceeeeEecCCCCeEEEEEEEcC-C--CeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            468899999999999999999987 5  7789999955555567789999999999999999998    55678999999


Q ss_pred             ccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE---------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA---------------  137 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~---------------  137 (246)
                      |+++++|.+++.......+..     +..||+.||.|||++||+||||||+|||++.++ ..+++               
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~~~  375 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTA  375 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-CEEECCTTCEECCTTCCEEC
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCC-cEEEeecccceeccCCceee
Confidence            999999999997643333333     334999999999999999999999999998665 33333               


Q ss_pred             -------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          138 -------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       138 -------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                               |+|||||++++|++ |..||.+.+.......+......                 
T Consensus       376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-----------------  438 (495)
T 1opk_A          376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-----------------  438 (495)
T ss_dssp             CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-----------------
T ss_pred             cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-----------------
Confidence                                     49999999999998 99999887665544444331110                 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                 ..+..+++++.+|+.+||+.||.+|||+.++++
T Consensus       439 -----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          439 -----------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                       012467899999999999999999999999975

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.6e-39  Score=259.92  Aligned_cols=210  Identities=17%  Similarity=0.211  Sum_probs=158.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---------------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---------------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---------------   66 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|...........+.+|+.+++.++||||+++               
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNAL-D--SRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcC-C--CeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            579999999999999999999876 5  7889999843333445678899999999999999987               


Q ss_pred             --cCCceEEEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--------
Q 036362           67 --ENDKLVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--------  132 (246)
Q Consensus        67 --~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--------  132 (246)
                        ......++||||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++.        
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence              125788999999999999999975321    122234449999999999999999999999999986650        


Q ss_pred             ---------------------------------------------eeeEEEeehhhHHHHHHhhCCCCCCCCcchH-HHH
Q 036362          133 ---------------------------------------------TVKIARLISVGCIFAEMVIQEPLSEDASESR-ERI  166 (246)
Q Consensus       133 ---------------------------------------------~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~-~~~  166 (246)
                                                                   ....+|+||+||++++|++   ||....... ...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~  239 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK  239 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence                                                         0112469999999999997   444322222 222


Q ss_pred             HHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          167 SIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      .+... ....                 +       .......++.+.+|+.+||..||.+|||+.++++||||+..
T Consensus       240 ~~~~~-~~~~-----------------~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          240 KLRSV-SIEF-----------------P-------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHST-TCCC-----------------C-------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             hcccc-cccc-----------------C-------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            22211 0000                 0       00124567889999999999999999999999999999764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.8e-39  Score=267.51  Aligned_cols=208  Identities=21%  Similarity=0.251  Sum_probs=157.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCC--CCceEEe----cCCceEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMD--YPLIFRK----ENDKLVY   73 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~--~~~i~~~----~~~~~~~   73 (246)
                      +|++.+.||+|+||.||+|.+..    ++.||+|+.....   .....+.+|+.+++.++  ||||+++    ...+..+
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~  132 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEK----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  132 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTT----CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcCC----CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence            59999999999999999998765    6788999832222   23467889999999996  5999988    5667899


Q ss_pred             EEEeccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-------------------  131 (246)
                      +|||+ .+++|.+++......   ....+..||+.||.|||++||+||||||+|||++...                   
T Consensus       133 lv~E~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          133 MVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             EEEEC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC-------
T ss_pred             EEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccc
Confidence            99994 559999999764311   2233444999999999999999999999999996322                   


Q ss_pred             -----------Ceee--------------------EEEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCcCc
Q 036362          132 -----------YTVK--------------------IARLISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSEET  179 (246)
Q Consensus       132 -----------~~~~--------------------~~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~  179 (246)
                                 .+|+                    .+|+|||||++++|++|..||...... .....+..   ..... 
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~---~~~~~-  287 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---PNHEI-  287 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHC---TTSCC-
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhC---ccccC-
Confidence                       1111                    257999999999999999999865432 22222221   11000 


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                             ..+...++++.+|+.+||..||.+|||+.|+++||||+..
T Consensus       288 -----------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          288 -----------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             -----------------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             -----------------------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence                                   0013457899999999999999999999999999999753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1e-38  Score=251.49  Aligned_cols=202  Identities=14%  Similarity=0.169  Sum_probs=160.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cC--Cce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----EN--DKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~--~~~   71 (246)
                      +++|++.+.||+|+||.||+|++.     +..+|+|+.....   .....+.+|+.+++.++||||+++    ..  .+.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-----GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH   83 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-----TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-----CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCC
Confidence            368999999999999999999985     4468888833222   224578899999999999999998    23  378


Q ss_pred             EEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCCeee---------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDYTVK---------  135 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~~~~---------  135 (246)
                      .++||||+++++|.+++.......++.     +..|++.||.|||++|  ++||||||+||+++.++ ..+         
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~-~~~l~~~~~~~~  162 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDM-TARISMADVKFS  162 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTS-CEEEEGGGSCCT
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCc-ceeEEeccceee
Confidence            899999999999999997654322333     3349999999999999  99999999999999775 111         


Q ss_pred             ----------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          136 ----------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       136 ----------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  .+|+||+||++++|++|..||...........+......+            
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------  230 (271)
T 3kmu_A          163 FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP------------  230 (271)
T ss_dssp             TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC------------
T ss_pred             ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC------------
Confidence                                        2679999999999999999998877665544444321110            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     ..+..+++++.+++.+||+.||.+|||+.++++
T Consensus       231 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          231 ---------------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             ---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                           012467899999999999999999999999985

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.2e-39  Score=259.73  Aligned_cols=206  Identities=17%  Similarity=0.152  Sum_probs=160.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+..+.  ..+..||+|.....  ......+.+|+.+++.++||||+++    ...+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  102 (314)
T 2ivs_A           23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL  102 (314)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence            57999999999999999999874311  12578999983322  2223578899999999999999998    5677899


Q ss_pred             EEEeccCcccHHHHHhhhcc---------------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeE
Q 036362           74 QIFEYTGLLNLRKVIKNFLD---------------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQAL  126 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~---------------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil  126 (246)
                      +||||+++++|.+++.....                           .....+..||+.||.|||++||+||||||+||+
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIl  182 (314)
T 2ivs_A          103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL  182 (314)
T ss_dssp             EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEE
Confidence            99999999999999976422                           112223449999999999999999999999999


Q ss_pred             EecCCCeeeE-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHH
Q 036362          127 INLSDYTVKI-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRE  164 (246)
Q Consensus       127 ~~~~~~~~~~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~  164 (246)
                      ++.++ ..++                                         +|+||+||++++|++ |..||.+......
T Consensus       183 i~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  261 (314)
T 2ivs_A          183 VAEGR-KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL  261 (314)
T ss_dssp             EETTT-EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             EcCCC-CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            99665 3333                                         349999999999999 9999987766554


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ...+......                            ..+..+++++.+|+.+||+.||.+|||+.|++++
T Consensus       262 ~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          262 FNLLKTGHRM----------------------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHHHHTTCCC----------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhhcCCcC----------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            4443331100                            0124678999999999999999999999999865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.1e-38  Score=258.01  Aligned_cols=203  Identities=14%  Similarity=0.089  Sum_probs=158.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhh----hhhccc--cCCCCCcchhhhhhcccccCCCCceEEe---cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQT----VLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~----vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+.. +  +..    |++|..  .........+.+|+.+++.++||||+++   ......
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   89 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIP-E--GESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSL   89 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECC-T--TCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSE
T ss_pred             hHceeeeeeeecCCceEEEEEEcC-C--CceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcc
Confidence            589999999999999999999876 3  443    566652  2233445688899999999999999998   456779


Q ss_pred             EEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      ++||||+.+++|.+++....    ......+..||+.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        90 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSS-CEEECSCSGGGGSCCC
T ss_pred             EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCC-eEEECCCCcccccCcc
Confidence            99999999999999986532    223333445999999999999999999999999998665 33333           


Q ss_pred             ------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          138 ------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       138 ------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                    |+||+||++++|++ |..||.+.........+......+           
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------  237 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLA-----------  237 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCC-----------
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC-----------
Confidence                                          49999999999999 999998776554444433311000           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                       .+..+++++.+++.+||..||.+|||+.++++|
T Consensus       238 -----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          238 -----------------QPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             -----------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             -----------------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                             013467789999999999999999999999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-39  Score=261.15  Aligned_cols=204  Identities=18%  Similarity=0.240  Sum_probs=154.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC-------CCcchhhhhhcccccC----CCCceEEe----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-------GVPISILTKISPLKEM----DYPLIFRK----   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l----~~~~i~~~----   66 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|......       .....+.+|+.++..+    +|+||+++    
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLT-D--RLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTT-T--CCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hceEEeeEEEcCCCEEEEEEEEcc-C--CeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            579999999999999999999876 5  7789999832221       2445677899999988    89999998    


Q ss_pred             cCCceEEEEEec-cCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------
Q 036362           67 ENDKLVYQIFEY-TGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------  136 (246)
Q Consensus        67 ~~~~~~~lv~e~-~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------  136 (246)
                      ...+..++|+|+ +.+++|.+++....   ......+..||+.||.|||++||+||||||+||+++..+...++      
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            456788999999 78899999997642   22223344499999999999999999999999999833323333      


Q ss_pred             --------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          137 --------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       137 --------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                      +|+||+||++++|++|+.||.....      +...  ..         
T Consensus       188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~--~~---------  250 (312)
T 2iwi_A          188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEA--EL---------  250 (312)
T ss_dssp             EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHT--CC---------
T ss_pred             hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhhh--cc---------
Confidence                                            4599999999999999999975322      1110  00         


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                        .....+++.+.+|+.+||..||++|||+.|+++||||++..
T Consensus       251 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          251 ------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             ------------------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             ------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence                              01246789999999999999999999999999999999853

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.9e-39  Score=265.80  Aligned_cols=207  Identities=14%  Similarity=0.180  Sum_probs=159.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcc--cccchhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~--~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|++..  ....++.||+|......  .....+.+|+.++..+ +||||+++     ..+..
T Consensus        22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~  101 (359)
T 3vhe_A           22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  101 (359)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence            589999999999999999998543  11226789999843222  2234689999999999 79999998     33456


Q ss_pred             EEEEEeccCcccHHHHHhhhcccc--------------------------------------------------------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLDII--------------------------------------------------------   95 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~~~--------------------------------------------------------   95 (246)
                      .++||||+++++|.+++.......                                                        
T Consensus       102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (359)
T 3vhe_A          102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  181 (359)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred             eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence            899999999999999997642110                                                        


Q ss_pred             --------cc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------------------
Q 036362           96 --------NN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------------------  136 (246)
Q Consensus        96 --------~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------------------  136 (246)
                              +.     .++.||+.||.|||++||+||||||+|||++.++ ..++                          
T Consensus       182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~  260 (359)
T 3vhe_A          182 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLK  260 (359)
T ss_dssp             --CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred             ccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC-cEEEEeccceeeecccccchhccccCCCce
Confidence                    22     2334999999999999999999999999998665 3333                          


Q ss_pred             ---------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcch
Q 036362          137 ---------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKD  200 (246)
Q Consensus       137 ---------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (246)
                                     +|+|||||++++|++ |..||.+................+.                        
T Consensus       261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------  316 (359)
T 3vhe_A          261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR------------------------  316 (359)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC------------------------
T ss_pred             eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC------------------------
Confidence                           349999999999998 9999988765554444333211110                        


Q ss_pred             hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       201 ~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                         .+..+++++.+++.+||..||.+|||+.|+++|
T Consensus       317 ---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          317 ---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence               114578999999999999999999999999976

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.2e-38  Score=252.48  Aligned_cols=201  Identities=17%  Similarity=0.173  Sum_probs=161.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|+||.||+|....    +..||+|...........+.+|+.+++.++||||+++   ...+..++||||
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~   88 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNG----HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY   88 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT----TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             HhhhheeeecCCCCeEEEEEEEcC----CcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEec
Confidence            579999999999999999999765    5578999855445556789999999999999999988   445678999999


Q ss_pred             cCcccHHHHHhhhcc-----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           79 TGLLNLRKVIKNFLD-----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~-----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      +++++|.+++.....     .....+..|++.||.|||++||+||||||+||+++.++ ..++                 
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~  167 (279)
T 1qpc_A           89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAR  167 (279)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-CEEECCCTTCEECSSSCEECC
T ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC-CEEECCCcccccccCcccccc
Confidence            999999999975432     22223344999999999999999999999999998665 2222                 


Q ss_pred             -----------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                             +|+||+|+++++|++ |..||.+.........+......                  
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~------------------  229 (279)
T 1qpc_A          168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM------------------  229 (279)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC------------------
T ss_pred             cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC------------------
Confidence                                   359999999999999 89999877665554444331100                  


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                .....+++++.+|+.+||..||++|||+.++++
T Consensus       230 ----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          230 ----------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                      011467899999999999999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.8e-38  Score=249.76  Aligned_cols=202  Identities=13%  Similarity=0.089  Sum_probs=162.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||.||+|.+..    +..||+|...........+.+|+.+++.++||||+++    ...+..+++||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLN----KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT----TEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             hheeeeeEecCCCceeEEEEEecC----CCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            579999999999999999999875    5578999855444456789999999999999999988    56678999999


Q ss_pred             ccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           78 YTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      |+++++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++ ..++                 
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG-CEEECCTTGGGGBCCHHHHST
T ss_pred             CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC-CEEEccccccccccccccccc
Confidence            999999999997642    112223344999999999999999999999999998665 2233                 


Q ss_pred             -----------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                             +|+||+|+++++|++ |..||...........+.......                 
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~-----------------  225 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-----------------  225 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-----------------
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC-----------------
Confidence                                   459999999999999 899998776655544443311000                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 .+...++.+.+++.+||+.||.+|||+.+++++
T Consensus       226 -----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          226 -----------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                       013568899999999999999999999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.3e-38  Score=268.34  Aligned_cols=208  Identities=17%  Similarity=0.187  Sum_probs=165.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|+||.||+|.+..    ...||+|.........+.+.+|+.+++.++||||+++   ...+..++||||
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~  259 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  259 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT----TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             hHceeeeeecCCCCeEEEEEEECC----CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehh
Confidence            468999999999999999999876    4468999854444456789999999999999999998   444778999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------------  136 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------------  136 (246)
                      +++++|.+++.......+     ..+..|++.||.|||++||+||||||+|||++.++ ..++                 
T Consensus       260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~~~  338 (452)
T 1fmk_A          260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTAR  338 (452)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CEEECCCCTTC----------
T ss_pred             hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCC-CEEECCCccceecCCCceecc
Confidence            999999999975322222     23344999999999999999999999999998665 3333                 


Q ss_pred             -----------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                             +|+||||+++++|++ |..||.+....+....+......+                 
T Consensus       339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-----------------  401 (452)
T 1fmk_A          339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-----------------  401 (452)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-----------------
T ss_pred             cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-----------------
Confidence                                   349999999999999 999998877665555444321111                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC--CCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH--HYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h--~~~~~~  242 (246)
                                 .++.+++.+.+|+.+||..||++|||++++++.  .++...
T Consensus       402 -----------~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          402 -----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             -----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence                       124678999999999999999999999999863  565543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.9e-38  Score=255.00  Aligned_cols=202  Identities=17%  Similarity=0.193  Sum_probs=158.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhh----hhcc--ccCCCCCcchhhhhhcccccCCCCceEEe---cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTV----LLKA--DIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~v----aiK~--~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~   72 (246)
                      ++|++++.||+|+||.||+|.+.. +  +..+    ++|.  ..........+.+|+.+++.++||||+++   ......
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   91 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIP-E--GEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV   91 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC-T--TCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcC-C--CceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCc
Confidence            589999999999999999999876 4  4444    5555  22344456788999999999999999998   334458


Q ss_pred             EEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      +++++++.+++|.+++.....    .....+..|++.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-EEEECCTTC-------
T ss_pred             eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCC-CEEEccCcceeEccCc
Confidence            899999999999999976432    22233444999999999999999999999999998766 33333           


Q ss_pred             ------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          138 ------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       138 ------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                    |+||+||++++|++ |..||.+.........+......+           
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~-----------  239 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP-----------  239 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-----------
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC-----------
Confidence                                          49999999999999 999998876655444443321111           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                       ....+++++.+|+.+||..||.+|||+.|+++
T Consensus       240 -----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          240 -----------------QPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             -----------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                             11457889999999999999999999999985

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.1e-38  Score=253.68  Aligned_cols=205  Identities=13%  Similarity=0.132  Sum_probs=156.5

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc----chhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN----AYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~----~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+..+..    ....||+|.. .........+.+|+.+++.++||||+++    ...+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            689999999999999999999877321    0146888883 3333445678999999999999999988    566788


Q ss_pred             EEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe-------eeEEE---
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT-------VKIAR---  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~-------~~~~D---  138 (246)
                      ++||||+++++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++..       .+++|   
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~  167 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI  167 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCS
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcc
Confidence            999999999999999976432    1122234499999999999999999999999999876621       55555   


Q ss_pred             ---------------------------------eehhhHHHHHHhhCC-CCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          139 ---------------------------------LISVGCIFAEMVIQE-PLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       139 ---------------------------------i~slG~i~~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                       +||+||++++|++|. +|+............... .           
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~-~-----------  235 (289)
T 4fvq_A          168 SITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-H-----------  235 (289)
T ss_dssp             CTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-C-----------
T ss_pred             cccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc-C-----------
Confidence                                             999999999999954 455544433322222110 0           


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                        ..+...++++.+|+.+||+.||.+|||+.|+++|
T Consensus       236 ------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          236 ------------------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             ------------------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                              0113457789999999999999999999999976

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1e-38  Score=258.37  Aligned_cols=203  Identities=17%  Similarity=0.172  Sum_probs=156.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchh--hhhhccc--cCCCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ--TVLLKAD--IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~--~vaiK~~--~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|++.. +  +.  .+++|..  .........+.+|+.+++++ +||||+++    ...+..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKK-D--GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEE-T--TEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             HHccceeeeecCCCceEEEEEEcc-C--CcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            689999999999999999999877 4  44  3477772  23344567789999999999 89999988    567789


Q ss_pred             EEEEeccCcccHHHHHhhhc--------------ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--------------DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT  133 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--------------~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~  133 (246)
                      ++||||+++++|.+++....              ...+.     .+..||+.||.|||++||+||||||+||+++.++ .
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~-~  180 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-V  180 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-C
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC-e
Confidence            99999999999999996532              11222     2344999999999999999999999999998765 3


Q ss_pred             eeE--------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCC
Q 036362          134 VKI--------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       134 ~~~--------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                      .++                                      +|+||+||++++|++ |..||.+.........+......
T Consensus       181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~  260 (327)
T 1fvr_A          181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL  260 (327)
T ss_dssp             EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC
T ss_pred             EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCC
Confidence            333                                      349999999999998 99999877665444433321000


Q ss_pred             CCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          175 PSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                                  ..+..+++++.+|+.+||..||.+|||+.|++++
T Consensus       261 ----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          261 ----------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             ----------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                                        0114678999999999999999999999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.2e-38  Score=256.43  Aligned_cols=203  Identities=17%  Similarity=0.177  Sum_probs=155.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhh----hhhccc--cCCCCCcchhhhhhcccccCCCCceEEe---cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQT----VLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~----vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|++.. +  +..    |++|..  .........+.+|+.+++.++||||+++   ......
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~-~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   91 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIP-E--GEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTV   91 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC-------CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcC-C--CceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe
Confidence            579999999999999999999876 3  333    466662  2233455689999999999999999998   334458


Q ss_pred             EEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      +++++++.+++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~-~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-EEEECCTTHHHHHTTT
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCC-CEEEccCcceeEccCC
Confidence            899999999999999976322    12233444999999999999999999999999999766 34444           


Q ss_pred             ------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          138 ------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       138 ------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                    |+|||||++++|++ |..||.+.........+......+           
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-----------  239 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP-----------  239 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-----------
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC-----------
Confidence                                          49999999999999 999998776655444333311111           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                       .....+.++.+++.+||+.||.+|||+.+++++
T Consensus       240 -----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          240 -----------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             -----------------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             -----------------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                             014578899999999999999999999999865

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.2e-40  Score=285.80  Aligned_cols=234  Identities=18%  Similarity=0.131  Sum_probs=160.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----c------C
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----E------N   68 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~------~   68 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..||+|+...  .......+.+|+.+++.++||||+++    .      .
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~-t--g~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~   89 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQD-T--GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP   89 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTT-T--TCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECC-C--CcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence            3689999999999999999999877 5  88899998322  22234568889999999999999987    1      2


Q ss_pred             CceEEEEEeccCcccHHHHHhhhc------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC--eeeE----
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFL------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY--TVKI----  136 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~--~~~~----  136 (246)
                      .+..++||||++|++|.+++....      ......+..|++.||.|||++||+||||||+||+++.++.  ..++    
T Consensus        90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            677899999999999999997632      2233344559999999999999999999999999986541  1233    


Q ss_pred             ----------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          137 ----------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       137 ----------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                        +|+||+||++++|++|..||.+..............+.........
T Consensus       170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~  249 (676)
T 3qa8_A          170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD  249 (676)
T ss_dssp             CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred             cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence                                              3499999999999999999986543322111000000000000000


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ......+....     .......+.+++.+.+|+.+||..||++|||+.|+++||||+++
T Consensus       250 l~g~~~~~~~l-----p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l  304 (676)
T 3qa8_A          250 LTGAVKFSSVL-----PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL  304 (676)
T ss_dssp             CSSSCCCCSSS-----CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred             hcccccccccc-----CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence            00000000000     00111223467899999999999999999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=5e-38  Score=264.62  Aligned_cols=199  Identities=14%  Similarity=0.163  Sum_probs=160.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+..     ..||+|.... ......+.+|+.++++++||||+++     ......++||
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~~-----~~vavK~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-----EEEEEEEESS-CTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             HHeEEEeeecCcCCeeEEEEEecC-----CeEEEEEeCC-chHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            578999999999999999998753     4789998433 3366789999999999999999987     3344799999


Q ss_pred             eccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ||+++++|.+++.......+.     .+..|++.||.|||++||+||||||+|||++.++ ..+++|             
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-~~kl~DfG~a~~~~~~~~~  345 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDT  345 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS-CEEECCCTTCEECC-----
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC-CEEEeeCCCcccccccccC
Confidence            999999999999865432222     3344999999999999999999999999999765 344444             


Q ss_pred             -----------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          139 -----------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                             +|||||++++|++ |..||......+....+......                    
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~--------------------  405 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM--------------------  405 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC--------------------
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--------------------
Confidence                                   9999999999998 99999877665555444431110                    


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                              ..+..+++++.+|+.+||..||.+|||+.++++
T Consensus       406 --------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          406 --------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                    012468899999999999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-39  Score=264.65  Aligned_cols=206  Identities=16%  Similarity=0.169  Sum_probs=160.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc----cchhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE----NAYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++..+.    ..+..||+|+.....  .....+.+|+.+++.+ +||||+++    ...+
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  148 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG  148 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence            57999999999999999999975411    114578999833222  2235788999999999 89999998    5677


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..++||||+++++|.+++.....              ..+.     .+..||+.||.|||++||+||||||+|||++.++
T Consensus       149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  228 (382)
T 3tt0_A          149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  228 (382)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCC
Confidence            89999999999999999976431              1122     3344999999999999999999999999998666


Q ss_pred             CeeeE-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVKI-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       .+++                                         +|+|||||++++|++ |..||.+.........+.
T Consensus       229 -~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~  307 (382)
T 3tt0_A          229 -VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK  307 (382)
T ss_dssp             -CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             -cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence             3333                                         349999999999999 999998776655444443


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ......                            .+..+++++.+|+.+||+.||++|||+.|++++
T Consensus       308 ~~~~~~----------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          308 EGHRMD----------------------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             TTCCCC----------------------------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCC----------------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            311000                            114678999999999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-38  Score=258.23  Aligned_cols=207  Identities=12%  Similarity=0.104  Sum_probs=159.6

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhcccc--CCCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADI--IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+...  ...+..||+|...  ........+.+|+.+++.+ +||||+++    ...+..
T Consensus        45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  124 (344)
T 1rjb_A           45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  124 (344)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence            5789999999999999999997321  1125678999832  2334567899999999999 89999988    566789


Q ss_pred             EEEEeccCcccHHHHHhhhccc--------------------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeE
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI--------------------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQAL  126 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~--------------------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil  126 (246)
                      ++||||+++++|.+++......                          ....+..||+.||.|||++||+||||||+||+
T Consensus       125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl  204 (344)
T 1rjb_A          125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL  204 (344)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEE
Confidence            9999999999999999764211                          11223449999999999999999999999999


Q ss_pred             EecCCCeeeEE-----------------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHH
Q 036362          127 INLSDYTVKIA-----------------------------------------RLISVGCIFAEMVI-QEPLSEDASESRE  164 (246)
Q Consensus       127 ~~~~~~~~~~~-----------------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~  164 (246)
                      ++.++ .++++                                         |+|||||++++|++ |..||.+......
T Consensus       205 l~~~~-~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  283 (344)
T 1rjb_A          205 VTHGK-VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  283 (344)
T ss_dssp             EETTT-EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             EcCCC-cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence            99766 33443                                         49999999999998 9999987765554


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ..........+                           ..+..+++++.+|+.+||..||.+|||+.++++|
T Consensus       284 ~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          284 FYKLIQNGFKM---------------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             HHHHHHTTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCC---------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            44433311000                           0114578999999999999999999999999876

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.7e-38  Score=251.74  Aligned_cols=206  Identities=14%  Similarity=0.134  Sum_probs=160.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+......+..||+|.....  ......+.+|+.+++.++||||+++   ...+..++||
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~   91 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM   91 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEE
Confidence            5899999999999999999987652322456899983222  2235678899999999999999998   4455679999


Q ss_pred             eccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------------
Q 036362           77 EYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------------  136 (246)
                      ||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++                
T Consensus        92 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~  170 (281)
T 3cc6_A           92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYK  170 (281)
T ss_dssp             ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETT-EEEECCCCGGGCC-------
T ss_pred             ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCC-cEEeCccCCCcccccccccc
Confidence            99999999999976421    12222334999999999999999999999999998766 2333                


Q ss_pred             ------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          137 ------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       137 ------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                              +|+||||+++++|++ |+.||...........+......+                
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~----------------  234 (281)
T 3cc6_A          171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP----------------  234 (281)
T ss_dssp             --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC----------------
T ss_pred             cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC----------------
Confidence                                    459999999999998 999998766655544443321110                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                  .+..+++.+.+++.+||..||.+|||+.|++++
T Consensus       235 ------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          235 ------------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             ------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                        014578999999999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=4.9e-39  Score=256.62  Aligned_cols=221  Identities=18%  Similarity=0.237  Sum_probs=154.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcc-cccchhhhhhccccC-CCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADII-PDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|++++.||+|+||.||+|+... ....++.||+|.... .......+.+|+.+++.++||||+++      ......+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            589999999999999999998521 011277899998322 22234578899999999999999987      2235689


Q ss_pred             EEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~  168 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVLPQDK  168 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-EEEECCCCSCC------
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCC-eEEEccCcccccccCCc
Confidence            99999999999999976432    12223344999999999999999999999999999766 3333             


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+||+|+++++|++|..|+......     .....+........    ..
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~----~~  239 (295)
T 3ugc_A          169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-----FMRMIGNDKQGQMI----VF  239 (295)
T ss_dssp             -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH-----HHHHHCTTCCTHHH----HH
T ss_pred             ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH-----HHhhhcCccccchh----HH
Confidence                                         34999999999999999888653321     01111111000000    00


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ........   ......+..+++++.+|+.+||+.||.+|||+.|+++
T Consensus       240 ~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          240 HLIELLKN---NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHT---TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhc---cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            00000000   0000112568899999999999999999999999975

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.5e-38  Score=261.75  Aligned_cols=205  Identities=17%  Similarity=0.151  Sum_probs=158.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|+...+...+..||+|.....  ......+.+|+.+++.++||||+++    ...+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            4799999999999999999987632222668999983322  2234578899999999999999998    556789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++ ..++               
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~  203 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-VCKVSDFGLGRVLEDDPEA  203 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECCC------------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC-CEEECcCccccccccCCcc
Confidence            999999999999976421    12223344999999999999999999999999998766 3333               


Q ss_pred             ---------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 +|+|||||+++++++ |..||...........+......+             
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~-------------  270 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP-------------  270 (373)
T ss_dssp             ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC-------------
T ss_pred             ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------
Confidence                                       349999999999997 999998776655444443321111             


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     ....+++++.+|+.+||+.||.+|||+.++++
T Consensus       271 ---------------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          271 ---------------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             ---------------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                           01357889999999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=9.9e-39  Score=259.91  Aligned_cols=206  Identities=14%  Similarity=0.143  Sum_probs=161.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++..+.  ..++.||+|.....  ......+.+|+.+++.++||||+++    ...+..+
T Consensus        47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  126 (343)
T 1luf_A           47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC  126 (343)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence            57999999999999999999986411  12578999983322  1224578899999999999999998    5677899


Q ss_pred             EEEeccCcccHHHHHhhhcc----------------------cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeE
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----------------------IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQAL  126 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----------------------~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil  126 (246)
                      +||||+++++|.+++.....                      ..+..     +..||+.||.|||++||+||||||+||+
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl  206 (343)
T 1luf_A          127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL  206 (343)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEE
Confidence            99999999999999976421                      12222     3449999999999999999999999999


Q ss_pred             EecCCCeeeE-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHH
Q 036362          127 INLSDYTVKI-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRE  164 (246)
Q Consensus       127 ~~~~~~~~~~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~  164 (246)
                      ++.++ ..++                                         +|+||||+++++|++ |..||.+......
T Consensus       207 ~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  285 (343)
T 1luf_A          207 VGENM-VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV  285 (343)
T ss_dssp             ECGGG-CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             ECCCC-eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH
Confidence            98665 3333                                         349999999999998 9999987766554


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ...+...  ...                          ..+..+++++.+|+.+||+.||.+|||+.+++++
T Consensus       286 ~~~~~~~--~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          286 IYYVRDG--NIL--------------------------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HHHHHTT--CCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCC--CcC--------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            4444331  100                          0124678999999999999999999999999864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.8e-38  Score=256.29  Aligned_cols=212  Identities=18%  Similarity=0.210  Sum_probs=163.3

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|.+...  ...+..||+|......  .....+.+|+.+++.++||||+++    ...+..+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  104 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL  104 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence            5799999999999999999987630  1126789999833222  123458899999999999999988    5667899


Q ss_pred             EEEeccCcccHHHHHhhhcc-------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----  136 (246)
                      +||||+++++|.+++.....             .....+..|++.||.|||++||+||||||+||+++.++ ..++    
T Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~-~~kl~Dfg  183 (322)
T 1p4o_A          105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFG  183 (322)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC-CEEECCTT
T ss_pred             EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC-eEEECcCc
Confidence            99999999999999975321             11222344999999999999999999999999999765 3333    


Q ss_pred             -------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          137 -------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       137 -------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                           +|+||+||++++|++ |..||...........+...  ..   
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~~---  258 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--GL---  258 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT--CC---
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC--Cc---
Confidence                                                 349999999999999 89999877665544444331  00   


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC------CCCcCC
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH------HYYRDV  242 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h------~~~~~~  242 (246)
                                             ......+++.+.+|+.+||..||.+|||+.|+++|      ++|+++
T Consensus       259 -----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~  305 (322)
T 1p4o_A          259 -----------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV  305 (322)
T ss_dssp             -----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred             -----------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccc
Confidence                                   00124678999999999999999999999999976      665543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.6e-39  Score=262.63  Aligned_cols=220  Identities=15%  Similarity=0.104  Sum_probs=153.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe--------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK--------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~~~~   73 (246)
                      ++|++.+.||+|+||+||+|++.     ++.||+|+............+|+.+++.++||||+++        ......+
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL-----NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET-----TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC-----CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            58999999999999999999874     4579999854444445566779999999999999998        1145689


Q ss_pred             EEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhC----------ceeeccCCCCCeEEecCCCeeeE-----
Q 036362           74 QIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSN----------RCLHGRLNPYQALINLSDYTVKI-----  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~----------~i~H~Dikp~Nil~~~~~~~~~~-----  136 (246)
                      +||||+++++|.+++....  ......+..|++.||.|||++          ||+||||||+|||++.++ ..++     
T Consensus        99 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~-~~kL~DFg~  177 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL-TACIADFGL  177 (322)
T ss_dssp             EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC-CEEECCCTT
T ss_pred             EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC-eEEEccCCc
Confidence            9999999999999997632  222333444999999999999          999999999999998765 2222     


Q ss_pred             -----------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCC
Q 036362          137 -----------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP  175 (246)
Q Consensus       137 -----------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  175 (246)
                                                               +|+|||||++++|++|+.||.+................+
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  257 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP  257 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred             ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence                                                     269999999999999999997654321111111111111


Q ss_pred             CcCcCCCCCCccccccccCCCCcchhhhh--CCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          176 SEETLPGVTTFFPFIYCYEESEPKDLAIL--LPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ....+...        .............  ....++++.+|+.+||+.||++|||+.|+++
T Consensus       258 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          258 SLEDMQEV--------VVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CHHHHHHH--------HTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhhhhh--------hhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            11000000        0000000000000  0123456999999999999999999999985

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=9.7e-39  Score=258.53  Aligned_cols=210  Identities=12%  Similarity=0.090  Sum_probs=158.9

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++...  ...+..||+|....  .......+.+|+.+++.++||||+++    ......+
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  109 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence            5899999999999999999985320  11267899998322  22334578899999999999999998    5567889


Q ss_pred             EEEeccCcccHHHHHhhhcc-----cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEE----
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-----IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIA----  137 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-----~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~----  137 (246)
                      +||||+++++|.+++.....     ..+.     .+..|++.||.|||++||+||||||+||+++.++  ...+++    
T Consensus       110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~  189 (327)
T 2yfx_A          110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  189 (327)
T ss_dssp             EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccc
Confidence            99999999999999976431     1122     2344999999999999999999999999998443  123333    


Q ss_pred             -------------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          138 -------------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       138 -------------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                           |+|||||++++|++ |..||...........+......     
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-----  264 (327)
T 2yfx_A          190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM-----  264 (327)
T ss_dssp             HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-----
T ss_pred             ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC-----
Confidence                                                 49999999999998 99999877655444443331100     


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                             .....+++.+.+|+.+||..||.+|||+.++++|.|+
T Consensus       265 -----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          265 -----------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             -----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -----------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence                                   0114678999999999999999999999999998775

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.6e-37  Score=246.91  Aligned_cols=204  Identities=15%  Similarity=0.139  Sum_probs=155.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC--------cchhhhhhcccccCCCCceEEe--cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV--------PISILTKISPLKEMDYPLIFRK--ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~i~~~--~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|........        ...+.+|+.+++.++||||+++  .....
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVK-D--KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETT-T--CCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             ccceehhccccCCceeEEEEEEcC-C--ceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            589999999999999999999977 5  778999983222211        1678899999999999999998  22223


Q ss_pred             EEEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCC----eeeEE----
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDY----TVKIA----  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~----~~~~~----  137 (246)
                      .++||||+++++|.+++.....    .....+..|++.||.|||++|  |+||||||+||+++.++.    ..+++    
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~  175 (287)
T 4f0f_A           96 PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL  175 (287)
T ss_dssp             TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred             CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence            3799999999999988855321    122233449999999999999  999999999999975441    13333    


Q ss_pred             ----------------------------------EeehhhHHHHHHhhCCCCCCCCcchHH--HHHHHHhhCCCCcCcCC
Q 036362          138 ----------------------------------RLISVGCIFAEMVIQEPLSEDASESRE--RISIFRLMGEPSEETLP  181 (246)
Q Consensus       138 ----------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  181 (246)
                                                        |+||+||++++|++|..||........  ...+.. .+.+.     
T Consensus       176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~-----  249 (287)
T 4f0f_A          176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE-EGLRP-----  249 (287)
T ss_dssp             CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH-SCCCC-----
T ss_pred             cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc-cCCCC-----
Confidence                                              499999999999999999986554332  222222 11100     


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                           ..+..+++++.+|+.+||+.||.+|||+.|+++
T Consensus       250 ---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          250 ---------------------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             ---------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                 012467899999999999999999999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.7e-38  Score=258.13  Aligned_cols=205  Identities=16%  Similarity=0.161  Sum_probs=156.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv   75 (246)
                      .|++.+.||+|+||.||+|+...+......+|+|....  .......+.+|+.+++.++||||+++     ...+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            47788999999999999998765231234678887322  22334678899999999999999988     345678999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE--------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA--------------  137 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~--------------  137 (246)
                      |||+++++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++ ..+++              
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kL~DFG~a~~~~~~~~~  248 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFD  248 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECCC------------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC-CEEEeeccccccccccccc
Confidence            999999999999975322    12223344999999999999999999999999998765 33333              


Q ss_pred             -----------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          138 -----------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       138 -----------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   |+|||||++++|++ |.+||......+....+...  ...           
T Consensus       249 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~--~~~-----------  315 (373)
T 3c1x_A          249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG--RRL-----------  315 (373)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT--CCC-----------
T ss_pred             cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC--CCC-----------
Confidence                                         49999999999999 77888776554444333331  100           


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                     ..+..+++++.+++.+||..||.+|||+.|++++
T Consensus       316 ---------------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          316 ---------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             ---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                           0014578999999999999999999999998853

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=4.8e-38  Score=269.82  Aligned_cols=208  Identities=18%  Similarity=0.187  Sum_probs=166.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|+||.||+|.+..    ...||+|+........+.+.+|+.+++.++|+||+++   ...+..++||||
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~  342 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY  342 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT----TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             hhhhhheecccCCCeEEEEEEECC----CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeeh
Confidence            468999999999999999999876    4468999854444456789999999999999999998   444778999999


Q ss_pred             cCcccHHHHHhhhccc-----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE----------------
Q 036362           79 TGLLNLRKVIKNFLDI-----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA----------------  137 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~-----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~----------------  137 (246)
                      +++++|.+++......     .+..+..||+.||.|||++||+||||||+|||++.++ ..+++                
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~~~~  421 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTAR  421 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CEEECCTTSTTTCCCHHHHTT
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC-cEEEcccccceecCCCceecc
Confidence            9999999999753222     2233444999999999999999999999999998665 34444                


Q ss_pred             ------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          138 ------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       138 ------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                              |+|||||++++|++ |..||.+....+....+......+                 
T Consensus       422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-----------------  484 (535)
T 2h8h_A          422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-----------------  484 (535)
T ss_dssp             CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC-----------------
T ss_pred             cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-----------------
Confidence                                    49999999999999 999998877665555444321110                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC--CCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH--HYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h--~~~~~~  242 (246)
                                 ....+++++.+|+.+||..||++|||+.++++.  .+|...
T Consensus       485 -----------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          485 -----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             -----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             -----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence                       114678999999999999999999999999874  565543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=7.3e-38  Score=247.79  Aligned_cols=199  Identities=13%  Similarity=0.143  Sum_probs=156.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+.     +..||+|.... ......+.+|+.+++.++||||+++     ...+..++||
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-----TEEEEEEECCC-CC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             hhceEEeEEecCCCceEEEEEEc-----CCEEEEEEecc-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            68999999999999999999874     45789998432 3356788999999999999999987     3345789999


Q ss_pred             eccCcccHHHHHhhhccc-----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           77 EYTGLLNLRKVIKNFLDI-----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~-----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      ||+++++|.+++......     ....+..|++.||.|||++|++||||||+||+++.++ ..++               
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~l~Dfg~~~~~~~~~~~  173 (278)
T 1byg_A           95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDT  173 (278)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-CEEECCCCC----------
T ss_pred             ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCC-cEEEeeccccccccccccC
Confidence            999989999999764322     2233444999999999999999999999999998665 3333               


Q ss_pred             ---------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          137 ---------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       137 ---------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                           +|+||+|+++++|++ |..||...........+.....                     
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---------------------  232 (278)
T 1byg_A          174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---------------------  232 (278)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---------------------
T ss_pred             CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---------------------
Confidence                                 459999999999998 9999987665544443332100                     


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                             ......+++.+.+++.+||..||.+|||+.|+++
T Consensus       233 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          233 -------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence                   0012467899999999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.8e-39  Score=266.30  Aligned_cols=226  Identities=11%  Similarity=0.092  Sum_probs=157.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+..  ........+.+|+.+++.++||||+++      ......+
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKK-T--GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECC-C--CcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence            479999999999999999999987 6  7889999832  222345677899999999999999988      2345789


Q ss_pred             EEEeccCcccHHHHHhhhcc------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEE----ecCC------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALI----NLSD------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~----~~~~------------  131 (246)
                      +||||+++++|.+++.....      .....+..||+.||.|||++||+||||||+|||+    +..+            
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            99999999999999976332      2222334499999999999999999999999998    3222            


Q ss_pred             ----------------Ceee-----------------EEEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCc
Q 036362          132 ----------------YTVK-----------------IARLISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSE  177 (246)
Q Consensus       132 ----------------~~~~-----------------~~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~  177 (246)
                                      .+|+                 .+|+||+||++++|++|+.||...... .....+....+..+.
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (396)
T ss_dssp             CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred             ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence                            1111                 246999999999999999999753321 111222222222222


Q ss_pred             CcCCCCCCc----cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          178 ETLPGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       178 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ..+......    ..|....+.     .......+++.+.+++++||..||++|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          246 GAISGVQKAENGPIDWSGDMPV-----SCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             TCCEEEECSTTCCEEEESSCCT-----TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             ccchhheeccCCCcccCccCCc-----ccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            222111111    011101100     00111235678899999999999999999999864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.9e-38  Score=254.04  Aligned_cols=207  Identities=14%  Similarity=0.140  Sum_probs=160.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcc--cccchhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~--~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|++..  ....+..||+|......  .....+.+|+.+++.+ +||||+++    ...+..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~  102 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence            579999999999999999998632  01226789999833222  2346788999999999 89999988    567789


Q ss_pred             EEEEeccCcccHHHHHhhhccc----------------ccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI----------------INN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~----------------~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ++||||+++++|.+++......                .+.     .+..|++.||.|||++||+||||||+||+++.++
T Consensus       103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  182 (313)
T 1t46_A          103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR  182 (313)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCC
Confidence            9999999999999999764321                122     2333999999999999999999999999998766


Q ss_pred             CeeeE-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVKI-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       ..++                                         +|+||+|+++++|++ |..||.............
T Consensus       183 -~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  261 (313)
T 1t46_A          183 -ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (313)
T ss_dssp             -EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             -CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence             3333                                         349999999999998 999998766554444433


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .....+                           ......++++.+++.+||..||.+|||+.|++++
T Consensus       262 ~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          262 KEGFRM---------------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHTCCC---------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCCC---------------------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            321100                           0014578999999999999999999999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.1e-37  Score=248.42  Aligned_cols=204  Identities=15%  Similarity=0.118  Sum_probs=158.7

Q ss_pred             CCcccee-eeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe---cCCceEEE
Q 036362            2 EKYRKVE-LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~-~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~l   74 (246)
                      ++|++.+ .||+|+||.||+|.+.. ...++.||+|+....   ......+.+|+.+++.++||||+++   ...+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQM-KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEEC-SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecC-CCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence            4788888 99999999999997643 222678999983322   2224678899999999999999998   45567899


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      ||||+++++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++ ..++               
T Consensus        95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~  173 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKALRADENY  173 (291)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-EEEECCCTTCEECCTTCSE
T ss_pred             EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCC-cEEEccCCcceeeccCCCc
Confidence            999999999999997642   222233444999999999999999999999999998766 2222               


Q ss_pred             ---------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 +|+||||+++++|++ |..||...........+...  ...            
T Consensus       174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--~~~------------  239 (291)
T 1xbb_A          174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG--ERM------------  239 (291)
T ss_dssp             EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT--CCC------------
T ss_pred             ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCC------------
Confidence                                       459999999999999 99999887665544433331  000            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                    ..+..+++++.+++.+||+.||.+|||+.++++
T Consensus       240 --------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          240 --------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             --------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                          012467899999999999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.3e-38  Score=250.26  Aligned_cols=206  Identities=14%  Similarity=0.096  Sum_probs=159.3

Q ss_pred             CCcccee-eeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVE-LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~-~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|.+.+ .||+|+||.||+|.+.. ...+..||+|.....  ......+.+|+.+++.++||||+++   ...+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRM-RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEecc-CCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence            4677887 99999999999998754 222667899983322  2235678899999999999999998   445679999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++ ..++               
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~-~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-YAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-EEEECCCTTCEECTTCSCE
T ss_pred             EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCC-CEEECcccceeeeccCcce
Confidence            99999999999986432    222233444999999999999999999999999998766 2222               


Q ss_pred             ---------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ---------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                 +|+||+|+++++|++ |..||...........+...  ..             
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~--~~-------------  231 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG--KR-------------  231 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT--CC-------------
T ss_pred             eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC--Cc-------------
Confidence                                       459999999999998 99999877665544444331  00             


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH  237 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~  237 (246)
                                   ...++.+++++.+++.+||..||.+|||+.++++|.
T Consensus       232 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          232 -------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             -------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             -------------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence                         001246789999999999999999999999999763

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.7e-38  Score=252.19  Aligned_cols=204  Identities=17%  Similarity=0.208  Sum_probs=156.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||+||+|.+.. +  ++.||+|.. .........+.+|+.+++.++||||+++    ...+..++||
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~-~--~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRE-T--GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETT-T--CCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEECC-C--CcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence            689999999999999999999987 5  778899972 2233445678899999999999999998    5578899999


Q ss_pred             eccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee------------------
Q 036362           77 EYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV------------------  134 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~------------------  134 (246)
                      ||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..                  
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~~  165 (310)
T 3s95_A           87 EYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK-NVVVADFGLARLMVDEKTQP  165 (310)
T ss_dssp             ECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTS-CEEECCCTTCEECC------
T ss_pred             EecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCC-CEEEeecccceecccccccc
Confidence            99999999999976321    12223344999999999999999999999999998765 11                  


Q ss_pred             -----------------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          135 -----------------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       135 -----------------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                         ..+|+||+|+++++|++|..|+.........              
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~--------------  231 (310)
T 3s95_A          166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--------------  231 (310)
T ss_dssp             --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT--------------
T ss_pred             cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH--------------
Confidence                                               1256999999999999999887643221000              


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                            ...      ..........++.+++.+.+++.+||+.||++|||+.++++
T Consensus       232 ------~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          232 ------FGL------NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             ------SSB------CHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------Hhh------hhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                  000      00000001113578899999999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.1e-37  Score=248.16  Aligned_cols=204  Identities=14%  Similarity=0.145  Sum_probs=157.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|++.++||+|+||.||+|++..      .+|+|+....   ......+.+|+.+++.++||||+++   ......++|
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~~------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv   97 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIV   97 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESSS------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred             cceeeeeEecCCCCeEEEEEEEcC------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEE
Confidence            579999999999999999998754      3777773222   2224568899999999999999988   556678999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee----------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK----------------  135 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~----------------  135 (246)
                      |||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..+                
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A           98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT-EEEECCCC-----------
T ss_pred             EEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC-CEEEccceecccccccccc
Confidence            999999999999854321    12223444999999999999999999999999998766 122                


Q ss_pred             ----------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          136 ----------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       136 ----------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  .+|+||+|+++++|++|..||..................+.           
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------  245 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-----------  245 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-----------
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-----------
Confidence                                        24699999999999999999988766655544444211111           


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  ........+++.+.+|+.+||..||.+|||+.++++
T Consensus       246 ------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          246 ------------DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             ------------CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                        011112467899999999999999999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3.1e-38  Score=255.35  Aligned_cols=218  Identities=12%  Similarity=0.133  Sum_probs=155.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||.||+|+...    +..||+|...  ........+.+|+.+++.++||||+++    ...+..++|
T Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  105 (326)
T 3uim_A           30 DNFSNKNILGRGGFGKVYKGRLAD----GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV  105 (326)
T ss_dssp             TSSCSTTEEECCSSSEEEEECCSS----SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred             hccccceeEecCCCcEEEEEEecC----CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence            589999999999999999998654    7789999822  223334578999999999999999998    566788999


Q ss_pred             EeccCcccHHHHHhhhccc--cc-----chHHHHHHHHHHHHhhC---ceeeccCCCCCeEEecCCCeeeEE--------
Q 036362           76 FEYTGLLNLRKVIKNFLDI--IN-----NPKTAKILRVLSYYHSN---RCLHGRLNPYQALINLSDYTVKIA--------  137 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~--~~-----~~~~~qil~~L~~lH~~---~i~H~Dikp~Nil~~~~~~~~~~~--------  137 (246)
                      |||+++++|.+++......  .+     ..+..|++.||.|||++   ||+||||||+|||++.++ ..+++        
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~-~~kl~Dfg~~~~~  184 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKLM  184 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC-CEEECCCSSCEEC
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC-CEEeccCcccccc
Confidence            9999999999999764321  12     23344999999999999   999999999999999765 33333        


Q ss_pred             --------------------------------EeehhhHHHHHHhhCCCCCCCCc-----chHHHHHHHHhhCCCCcCcC
Q 036362          138 --------------------------------RLISVGCIFAEMVIQEPLSEDAS-----ESRERISIFRLMGEPSEETL  180 (246)
Q Consensus       138 --------------------------------Di~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  180 (246)
                                                      |+||+||++++|++|..||....     ................   .
T Consensus       185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~  261 (326)
T 3uim_A          185 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK---L  261 (326)
T ss_dssp             CSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC---S
T ss_pred             CcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh---h
Confidence                                            49999999999999999996211     1111111111111000   0


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                      ......            ..........++.+.+++.+||+.||.+|||+.|+++|-.-
T Consensus       262 ~~~~~~------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          262 EALVDV------------DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTSSCT------------TCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhhcCh------------hhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            000000            00000012235789999999999999999999999987543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.2e-38  Score=255.47  Aligned_cols=221  Identities=19%  Similarity=0.244  Sum_probs=155.9

Q ss_pred             CCccceeeeCCccceEEEEEEEccc-ccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|++.+.||+|+||.||+|+.... ...++.||+|... ........+.+|+.+++.++||||+++      ......+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5899999999999999999985210 1127789999832 222334568999999999999999987      3567899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||+++++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~-~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA-HVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-EEEECCGGGCEECCTTC
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCC-CEEEcccccceecccCC
Confidence            9999999999999997632    222233344999999999999999999999999998766 2333             


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+||+||++++|++|..||.........     .......  ..   ...
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-----~~~~~~~--~~---~~~  251 (327)
T 3lxl_A          182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR-----MMGCERD--VP---ALS  251 (327)
T ss_dssp             SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-----HCC------CC---HHH
T ss_pred             ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh-----hcccccc--cc---cHH
Confidence                                         45999999999999999998754322100     0000000  00   000


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ........   .........+++++.+|+.+||..||.+|||+.|++++
T Consensus       252 ~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          252 RLLELLEE---GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHHHT---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhhc---ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            00000000   00001125688999999999999999999999999654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=5.2e-38  Score=253.05  Aligned_cols=211  Identities=17%  Similarity=0.210  Sum_probs=150.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC---cchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV---PISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      +++|++++.||+|+||.||+|.+.. +  ++.||+|........   ...+.++..+++.++||||+++    ...+..+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRK-T--GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETT-T--CCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hccccccceeeecCCeeEEEEEEec-C--CeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            3689999999999999999999987 5  778999983222111   1233344456778899999998    5677899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCCCeee-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSDYTVK-------------  135 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~~~~~-------------  135 (246)
                      +||||++ +.+..+.....    ......+..|++.||.|||++ ||+||||||+||+++.++ ..+             
T Consensus       101 lv~e~~~-~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          101 IAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-QIKLCDFGISGRLVDD  178 (318)
T ss_dssp             EEECCCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS-CEEECCCTTC------
T ss_pred             EEEeccC-CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC-CEEEEECCCchhccCC
Confidence            9999995 77766665422    122223444999999999995 999999999999998765 111             


Q ss_pred             ------------------------------EEEeehhhHHHHHHhhCCCCCCCCcc-hHHHHHHHHhhCCCCcCcCCCCC
Q 036362          136 ------------------------------IARLISVGCIFAEMVIQEPLSEDASE-SRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       136 ------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                    .+|+||+||++++|++|..||..... ......+...  .+..       
T Consensus       179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~-------  249 (318)
T 2dyl_A          179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE--EPPL-------  249 (318)
T ss_dssp             --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS--CCCC-------
T ss_pred             ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc--CCCC-------
Confidence                                          24699999999999999999986433 3333333331  1100       


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                              .         .....+++++.+|+.+||..||.+|||+.++++||||++.
T Consensus       250 --------~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          250 --------L---------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             --------C---------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             --------C---------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence                    0         0013578999999999999999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=7.5e-38  Score=250.07  Aligned_cols=204  Identities=16%  Similarity=0.150  Sum_probs=153.9

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv   75 (246)
                      +|++.+.||+|+||.||+|++..+......+++|....  .......+.+|+.+++.++||||+++     ...+..+++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            68899999999999999999765331233577887322  22234578899999999999999988     345688999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++               
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~-~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-CEEECSCGGGCCCSCGGGC
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCC-CEEECcccccccccccchh
Confidence            999999999999965322    12222334999999999999999999999999998765 2333               


Q ss_pred             ----------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 ----------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  +|+||+|+++++|++ |.+||...........+.......            
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  252 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL------------  252 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC------------
T ss_pred             ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC------------
Confidence                                        359999999999999 667777666555444443321110            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                      .+..+++++.+++.+||+.||.+|||+.|+++
T Consensus       253 ----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          253 ----------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             ----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                            01457889999999999999999999999985

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-38  Score=263.91  Aligned_cols=207  Identities=16%  Similarity=0.248  Sum_probs=153.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e   77 (246)
                      +|++.+.||+|+||+|+.....  +  ++.||+|...  ........+|+.+++.+ +||||+++    ......|+|||
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~--~--~~~vAvK~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMF--D--NRDVAVKRIL--PECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEES--S--SSEEEEEEEC--TTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCCeeecCcCEEEEEEEEe--C--CeEEEEEEEC--HHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            5889999999999997643333  3  6789999832  33445688999999999 79999998    56778999999


Q ss_pred             ccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC---C-------------------
Q 036362           78 YTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS---D-------------------  131 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~---~-------------------  131 (246)
                      |++ ++|.+++.....    .....+..||+.||.|||++||+||||||+|||++.+   +                   
T Consensus        99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~  177 (432)
T 3p23_A           99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR  177 (432)
T ss_dssp             CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred             CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence            999 799999976432    1223455599999999999999999999999999522   1                   


Q ss_pred             ---------------Ceee------------EEEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCC
Q 036362          132 ---------------YTVK------------IARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGV  183 (246)
Q Consensus       132 ---------------~~~~------------~~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (246)
                                     .+|+            .+|+||+||++++|++ |..||........ ....   +.......   
T Consensus       178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-~~~~---~~~~~~~~---  250 (432)
T 3p23_A          178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-NILL---GACSLDCL---  250 (432)
T ss_dssp             --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-HHHT---TCCCCTTS---
T ss_pred             cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-HHHh---ccCCcccc---
Confidence                           0111            2579999999999999 8999965443322 1111   11110000   


Q ss_pred             CCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                         ......+..+++|+.+||+.||.+|||+.|+++||||.++
T Consensus       251 -------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          251 -------------------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             -------------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             -------------------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence                               0001235668999999999999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.4e-38  Score=256.23  Aligned_cols=214  Identities=17%  Similarity=0.215  Sum_probs=154.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhc-ccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKIS-PLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~-~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|.....  ......+..|+. +++.++||||+++    ...+..++
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKP-S--GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETT-T--TEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhehheeccCCCEEEEEEEEcC-C--CCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            689999999999999999999977 5  788999983222  122334555655 7777899999998    56788999


Q ss_pred             EEeccCcccHHHHHhhh---cccccc-----hHHHHHHHHHHHHhhC-ceeeccCCCCCeEEecCC--------------
Q 036362           75 IFEYTGLLNLRKVIKNF---LDIINN-----PKTAKILRVLSYYHSN-RCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~---~~~~~~-----~~~~qil~~L~~lH~~-~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      ||||++ ++|.+++...   ....+.     .+..|++.||.|||++ ||+||||||+||+++.++              
T Consensus        99 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A           99 CMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             EECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             EEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            999999 6888887531   112222     3344999999999999 999999999999998766              


Q ss_pred             --------------Ceee-------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          132 --------------YTVK-------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       132 --------------~~~~-------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                    .+|+             .+|+|||||++++|++|..||........  .+.......         
T Consensus       178 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~---------  246 (327)
T 3aln_A          178 DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD--QLTQVVKGD---------  246 (327)
T ss_dssp             ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCSC---------
T ss_pred             cccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH--HHHHHhcCC---------
Confidence                          1222             23699999999999999999976432110  000000000         


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  ...........+++++.+|+.+||..||.+|||+.++++||||.+.
T Consensus       247 ------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          247 ------------PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             ------------CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ------------CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence                        0000001124688999999999999999999999999999999753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.4e-38  Score=255.40  Aligned_cols=206  Identities=17%  Similarity=0.160  Sum_probs=159.1

Q ss_pred             CCccceeeeCCccceEEEEEEEccc----ccchhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA----ENAYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|++...    ...+..||+|......  .....+.+|+.+++.+ +||||+++    ...+
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  114 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  114 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence            5899999999999999999997531    1125679999833222  2245688999999999 89999988    5667


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------cccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..++||||+++++|.+++.....              ..+.     .++.||+.||.|||++||+||||||+||+++.++
T Consensus       115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  194 (334)
T 2pvf_A          115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN  194 (334)
T ss_dssp             CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCC
Confidence            89999999999999999976431              1122     2344999999999999999999999999998666


Q ss_pred             CeeeE-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVKI-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       ..++                                         +|+||+|+++++|++ |..||.+.........+.
T Consensus       195 -~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  273 (334)
T 2pvf_A          195 -VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK  273 (334)
T ss_dssp             -CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             -CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh
Confidence             2333                                         349999999999999 999998776655444444


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .....                            .....+++++.+++.+||..||.+|||+.|++++
T Consensus       274 ~~~~~----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          274 EGHRM----------------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HTCCC----------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCC----------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            31100                            0124678999999999999999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.9e-38  Score=264.86  Aligned_cols=208  Identities=22%  Similarity=0.266  Sum_probs=152.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEEe
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~e   77 (246)
                      .|.+.+.||+|+||+||.+...  +  ++.||+|....  .....+.+|+.+++.+ +||||+++    ...+..++|||
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~--~--g~~vAvK~~~~--~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSF--Q--GRPVAVKRMLI--DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEES--S--SSEEEEEEEEG--GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             eeeccCeEeeCCCeEEEEEEEE--C--CeEEEEEEEcH--HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            3556788999999999876443  3  77899998321  2345678999999876 89999998    56788999999


Q ss_pred             ccCcccHHHHHhhhcccc----------cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------Ce--
Q 036362           78 YTGLLNLRKVIKNFLDII----------NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------YT--  133 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~----------~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------~~--  133 (246)
                      |++ ++|.+++.......          ...++.||+.||.|||++||+||||||+|||++.++            ..  
T Consensus        90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence            998 79999997643111          123556999999999999999999999999997431            01  


Q ss_pred             ------------------------------------------------eeEEEeehhhHHHHHHhh-CCCCCCCCcchHH
Q 036362          134 ------------------------------------------------VKIARLISVGCIFAEMVI-QEPLSEDASESRE  164 (246)
Q Consensus       134 ------------------------------------------------~~~~Di~slG~i~~~l~~-g~~~~~~~~~~~~  164 (246)
                                                                      ...+|+||+||++++|++ |..||....... 
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-  247 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-  247 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence                                                            112579999999999999 999997654332 


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                       ..+..  +.......   .          ..       ....+++++.+|+.+||+.||.+|||+.|+++||||.+
T Consensus       248 -~~i~~--~~~~~~~~---~----------~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          248 -SNIIR--GIFSLDEM---K----------CL-------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             -HHHHH--TCCCCCCC---T----------TC-------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             -HHHhc--CCCCcccc---c----------cc-------ccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence             12222  11000000   0          00       00234678999999999999999999999999999974

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.4e-38  Score=253.10  Aligned_cols=206  Identities=13%  Similarity=0.085  Sum_probs=156.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe----cCC-----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK----END-----   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~----~~~-----   69 (246)
                      ++|++.+.||+|+||.||+|........+..||+|......   .....+.+|+.+++.++||||+++    ...     
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  113 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI  113 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence            57999999999999999999876533235679999833222   223568899999999999999988    111     


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc----ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL----DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----  136 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~----~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----  136 (246)
                      ...++||||+++++|.+++....    ...+.     .+..|++.||.|||++||+||||||+||+++.++ ..++    
T Consensus       114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-~~kl~Dfg  192 (313)
T 3brb_A          114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM-TVCVADFG  192 (313)
T ss_dssp             -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS-CEEECSCS
T ss_pred             cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-cEEEeecC
Confidence            25699999999999999984321    12222     2344999999999999999999999999998765 2222    


Q ss_pred             -------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          137 -------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       137 -------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                           +|+||||+++++|++ |..||...........+......    
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~----  268 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL----  268 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC----
Confidence                                                 359999999999999 88999877766555544431100    


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                              ..+..+++++.+|+.+||..||.+|||+.+++++
T Consensus       269 ------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          269 ------------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             ------------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ------------------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                                    0124678999999999999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-37  Score=250.64  Aligned_cols=205  Identities=19%  Similarity=0.231  Sum_probs=159.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC----CCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|.+.. +  ++.||+|+....    ......+.+|+.+++.++||||+++    ...+..
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTV-R--ERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL  109 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETT-T--TEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcC-C--CeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence            4789999999999999999999876 5  778999983222    1123678899999999999999988    557789


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee---------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV---------------  134 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~---------------  134 (246)
                      +++|||+++++|.+++....   ......+..|++.||.|||++||+||||||+||+++.++ ..               
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~-~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD-FAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-CEEECSCCC--------
T ss_pred             EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC-CEEEecCccCccccccc
Confidence            99999999999999997642   222233444999999999999999999999999998665 11               


Q ss_pred             -------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          135 -------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       135 -------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                               ..+|+||||+++++|++|..||...........+..  ..+              
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~--------------  252 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ--AIP--------------  252 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS--CCC--------------
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc--CCC--------------
Confidence                                     235699999999999999999987654422222211  000              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-CHHHHhc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-TVNDALN  235 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-s~~e~l~  235 (246)
                                ......+.+++++.+++.+||..||.+|| |++++++
T Consensus       253 ----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          253 ----------RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             ----------CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             ----------CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                      01112357889999999999999999999 7887764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.6e-37  Score=244.92  Aligned_cols=204  Identities=16%  Similarity=0.153  Sum_probs=155.4

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-----CCCcchhhhhhcccccCCCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-----DGVPISILTKISPLKEMDYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~   71 (246)
                      +++|++.+.||+|+||.||+|.+.     +..+|+|+....     ......+.+|+.+++.++||||+++    ...+.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-----GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN   80 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-----TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-----CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            468999999999999999999974     446888882221     2234678899999999999999998    56778


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCc---eeeccCCCCCeEEecC-------CCeeeE---
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNR---CLHGRLNPYQALINLS-------DYTVKI---  136 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~---i~H~Dikp~Nil~~~~-------~~~~~~---  136 (246)
                      .++||||+++++|.+++....  ......+..|++.||.|||++|   |+||||||+||+++.+       +...++   
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           81 LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             eEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            999999999999999986432  2222333449999999999999   8999999999999852       212333   


Q ss_pred             ----------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCC
Q 036362          137 ----------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPG  182 (246)
Q Consensus       137 ----------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (246)
                                                        +|+||+|+++++|++|..||.+................+       
T Consensus       161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------  233 (271)
T 3dtc_A          161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL-------  233 (271)
T ss_dssp             CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCC-------
T ss_pred             CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCC-------
Confidence                                              349999999999999999998876654443333210000       


Q ss_pred             CCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          183 VTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                          .....+++.+.+++.+||+.||.+|||+.|+++|
T Consensus       234 --------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          234 --------------------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             --------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                                0124678999999999999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=7.5e-38  Score=251.80  Aligned_cols=209  Identities=20%  Similarity=0.245  Sum_probs=157.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCC--CCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMD--YPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~--~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+..    ++.||+|.....   ......+.+|+.+++.++  |+||+++    ......
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~  103 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEK----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  103 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCC----CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence            469999999999999999998865    667899983222   223457789999999997  5999987    567789


Q ss_pred             EEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      +++||+ .+++|.+++.....   .....+..|++.||.|||++||+||||||+||+++. +                  
T Consensus       104 ~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~  181 (313)
T 3cek_A          104 YMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT  181 (313)
T ss_dssp             EEEECC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred             EEEEec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence            999995 55999999976431   122233449999999999999999999999999964 4                  


Q ss_pred             -------------Cee--------------------eEEEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCc
Q 036362          132 -------------YTV--------------------KIARLISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSE  177 (246)
Q Consensus       132 -------------~~~--------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~  177 (246)
                                   .+|                    ..+|+||||+++++|++|..||...... .....+..   ....
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~---~~~~  258 (313)
T 3cek_A          182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID---PNHE  258 (313)
T ss_dssp             --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC---TTSC
T ss_pred             cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh---cccc
Confidence                         011                    1257999999999999999999765432 22222211   1000


Q ss_pred             CcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                              ...+...++++.+|+.+||..||.+|||+.|+++||||+...
T Consensus       259 ------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          259 ------------------------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             ------------------------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             ------------------------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence                                    001134578999999999999999999999999999998753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=6.4e-38  Score=254.25  Aligned_cols=207  Identities=12%  Similarity=0.100  Sum_probs=159.2

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc--chhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~--~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+..+..  ....||+|......  .....+.+|+.+++.+ +||||+++    ...+..
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  125 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV  125 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence            579999999999999999999876321  12468888732222  2345788999999999 89999998    566789


Q ss_pred             EEEEeccCcccHHHHHhhhc-----------------ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee
Q 036362           73 YQIFEYTGLLNLRKVIKNFL-----------------DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK  135 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~-----------------~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~  135 (246)
                      ++||||+++++|.+++....                 ......+..|++.||.|||++||+||||||+|||++.++ ..+
T Consensus       126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~-~~k  204 (333)
T 2i1m_A          126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAK  204 (333)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG-EEE
T ss_pred             EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC-eEE
Confidence            99999999999999996532                 111222334999999999999999999999999998665 222


Q ss_pred             E-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhC
Q 036362          136 I-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMG  173 (246)
Q Consensus       136 ~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~  173 (246)
                      +                                         +|+|||||++++|++ |..||.+...............
T Consensus       205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  284 (333)
T 2i1m_A          205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY  284 (333)
T ss_dssp             BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTC
T ss_pred             ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCC
Confidence            3                                         459999999999998 9999987665554444433211


Q ss_pred             CCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          174 EPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .+.                           .+...++.+.+|+.+||+.||.+|||+.|++++
T Consensus       285 ~~~---------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          285 QMA---------------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             CCC---------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC---------------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            000                           013568899999999999999999999999863

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.6e-37  Score=246.82  Aligned_cols=205  Identities=11%  Similarity=0.063  Sum_probs=157.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|+.. .......+.+|+.+++.+ +|++++++    ......++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~-~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLL-N--NQQVAIKFEP-RRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT-T--TEEEEEEEEE-CCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECC-C--CcEEEEEEec-cCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            579999999999999999999876 5  7889999832 234556789999999999 68888776    5677899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC----eeeE------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY----TVKI------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~----~~~~------------  136 (246)
                      ||+ +++|.+++....    ......+..|++.||.|||++||+||||||+||+++.++.    ..++            
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            999 699999997532    2222334449999999999999999999999999976541    1333            


Q ss_pred             ----------------------------------EEeehhhHHHHHHhhCCCCCCCCcch---HHHHHHHHhhCCCCcCc
Q 036362          137 ----------------------------------ARLISVGCIFAEMVIQEPLSEDASES---RERISIFRLMGEPSEET  179 (246)
Q Consensus       137 ----------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~  179 (246)
                                                        +|+|||||++++|++|+.||......   .....+.....      
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------  238 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ------  238 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH------
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc------
Confidence                                              35999999999999999999875432   22222222110      


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                        ........+.+++++.+|+.+||+.||.+|||++++++
T Consensus       239 ------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          239 ------------------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             ------------------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ------------------CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                              01122233578999999999999999999999999874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-37  Score=251.26  Aligned_cols=206  Identities=17%  Similarity=0.141  Sum_probs=158.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc-cchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~-~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|....+. ..+..||+|.....  ......+.+|+.+++.++||||+++    ...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            47889999999999999999886522 11345889983322  2224468899999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ||||+++++|.+++....    ......+..||+.||.|||++||+||||||+||+++.++ ..++              
T Consensus       124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-~~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECCCCC---------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC-cEEECCCCcchhhccccc
Confidence            999999999999997532    112223344999999999999999999999999998765 2222              


Q ss_pred             ----------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 ----------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  +|+||+||++++|++ |..||...........+......+            
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~------------  270 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP------------  270 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC------------
T ss_pred             cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCC------------
Confidence                                        459999999999998 999998776655444443311110            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                      ....+++.+.+++.+||+.||.+|||+.+++++
T Consensus       271 ----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          271 ----------------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             ----------------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ----------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            013578899999999999999999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=5e-38  Score=252.92  Aligned_cols=207  Identities=14%  Similarity=0.163  Sum_probs=158.0

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCCC--CcchhhhhhcccccC-CCCceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPDG--VPISILTKISPLKEM-DYPLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~   71 (246)
                      ++|++.+.||+|+||.||+|++...  ...++.||+|.......  ....+.+|+.+++.+ +||||+++     ..+..
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  106 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  106 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence            5899999999999999999986420  11267899998332222  234688999999999 69999988     33456


Q ss_pred             EEEEEeccCcccHHHHHhhhcc-------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD-------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~-------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~  132 (246)
                      .++||||+++++|.+++.....                   .....+..|++.||.|||++||+||||||+||+++.++ 
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~-  185 (316)
T 2xir_A          107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-  185 (316)
T ss_dssp             CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-
T ss_pred             eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC-
Confidence            9999999999999999976432                   11222334999999999999999999999999998665 


Q ss_pred             eeeE-----------------------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHH
Q 036362          133 TVKI-----------------------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFR  170 (246)
Q Consensus       133 ~~~~-----------------------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~  170 (246)
                      ..++                                         +|+||+||++++|++ |..||.+............
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~  265 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  265 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhc
Confidence            2233                                         359999999999998 9999987665444333333


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ....+                           ..+...++++.+++.+||..||.+|||+.|+++|
T Consensus       266 ~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          266 EGTRM---------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCccC---------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            21110                           0114578999999999999999999999999976

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=247.93  Aligned_cols=202  Identities=18%  Similarity=0.247  Sum_probs=156.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe--cCCceEEEEEecc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK--ENDKLVYQIFEYT   79 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~--~~~~~~~lv~e~~   79 (246)
                      ++|++.+.||+|+||.||+|++.     ++.||+|... .......+.+|+.+++.++||||+++  ...+..++||||+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~   81 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-----AKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYA   81 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-----TEEEEEEECS-STTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-----CeeEEEEEec-ChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcC
Confidence            58999999999999999999874     3468899833 33445678999999999999999998  3345689999999


Q ss_pred             CcccHHHHHhhhccc-cc-----chHHHHHHHHHHHHhh---CceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           80 GLLNLRKVIKNFLDI-IN-----NPKTAKILRVLSYYHS---NRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        80 ~~~~L~~~~~~~~~~-~~-----~~~~~qil~~L~~lH~---~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      ++++|.+++...... .+     ..+..|++.||.|||+   +||+||||||+||+++.++...+++|            
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~  161 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT  161 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc
Confidence            999999999754311 11     2233499999999999   89999999999999987774455555            


Q ss_pred             ------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccC
Q 036362          139 ------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE  194 (246)
Q Consensus       139 ------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (246)
                                              +||||+++++|++|+.||................+...                  
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------  223 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP------------------  223 (307)
T ss_dssp             ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC------------------
T ss_pred             cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC------------------
Confidence                                    99999999999999999975443221111111111100                  


Q ss_pred             CCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                              .....+++.+.+|+.+||+.||.+|||+.++++
T Consensus       224 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          224 --------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             --------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                    012467899999999999999999999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.6e-38  Score=255.37  Aligned_cols=215  Identities=18%  Similarity=0.159  Sum_probs=156.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++..    +..||+|... ........+.+|+.+++.++||||+++    ...+..++||
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRD----GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTT----CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred             hccCccceeecCCCeeEEEEEECC----CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            689999999999999999999754    6789999732 233345678999999999999999998    5667899999


Q ss_pred             eccCcccHHHHHhhhccc--ccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           77 EYTGLLNLRKVIKNFLDI--INN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~--~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      ||+++++|.+++......  .+.     .+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus       115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~  193 (321)
T 2qkw_B          115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF-VPKITDFGISKKGTELD  193 (321)
T ss_dssp             ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC-CEEECCCTTCEECSSSS
T ss_pred             EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC-CEEEeeccccccccccc
Confidence            999999999998653211  122     2344999999999999999999999999998665 2233             


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchH---HHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                  +|+||+||++++|++|+.||.......   ...............   ... 
T Consensus       194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-  269 (321)
T 2qkw_B          194 QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE---QIV-  269 (321)
T ss_dssp             CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC---SSS-
T ss_pred             ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH---Hhc-
Confidence                                        459999999999999999987543321   111111110100000   000 


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                              .   ........+..++.+.+++.+||+.||++|||+.|+++|
T Consensus       270 --------~---~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          270 --------D---PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             --------S---SSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------C---hhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                    0   000001112346789999999999999999999999976

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=253.74  Aligned_cols=204  Identities=16%  Similarity=0.144  Sum_probs=153.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe--------cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK--------ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|.. .........+.+|+.+++.++||||+++        ......
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLH-D--GHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETT-T--CCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecC-C--CcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            479999999999999999999976 5  788999972 2233345678899999999999999987        145688


Q ss_pred             EEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--------------  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--------------  131 (246)
                      ++||||+++++|.+++....  ...+     ..+..||+.||.|||++||+||||||+||+++.++              
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence            99999999999999997631  1222     23344999999999999999999999999998665              


Q ss_pred             ------------------------Ce------------eeEEEeehhhHHHHHHhhCCCCCCCCcch--HHHHHHHHhhC
Q 036362          132 ------------------------YT------------VKIARLISVGCIFAEMVIQEPLSEDASES--RERISIFRLMG  173 (246)
Q Consensus       132 ------------------------~~------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~~~~~  173 (246)
                                              .+            ...+|+||||+++++|++|..||......  .....+.....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  265 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS  265 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCC
Confidence                                    01            12357999999999999999998642111  01111111000


Q ss_pred             CCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          174 EPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      .                            .....+++++.+|+.+||+.||.+|||+.+++++
T Consensus       266 ~----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          266 I----------------------------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             C----------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C----------------------------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            0                            0014678999999999999999999999999976

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=7e-37  Score=244.80  Aligned_cols=220  Identities=15%  Similarity=0.218  Sum_probs=152.1

Q ss_pred             CCccceeeeCCccceEEEEEEEccc-ccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe------cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK------ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~   72 (246)
                      ++|++.+.||+|+||.||+|+.... ...++.||+|..  .........+.+|+.+++.++||||+++      ......
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3689999999999999999984210 112788999983  2233345678999999999999999987      223678


Q ss_pred             EEEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      ++||||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++            
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH-QVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-EEEECCCTTCEECCTT
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCC-CEEECcccccccccCC
Confidence            999999999999999955321    12223344999999999999999999999999998776 2333            


Q ss_pred             ------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          137 ------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       137 ------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                    +|+||+|+++++|++|..|+.....     ......+.......     .
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~-----~  249 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA-----LFLKMIGPTHGQMT-----V  249 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-----HHHHHHCSCCGGGH-----H
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh-----HHhhccCCcccccC-----H
Confidence                                          3599999999999999987643211     11111111110000     0


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ........   .......+..+++++.+|+.+||+.||.+|||+.++++
T Consensus       250 ~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          250 TRLVNTLK---EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHH---TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHh---ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            00000000   00000112568899999999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-37  Score=246.60  Aligned_cols=204  Identities=15%  Similarity=0.124  Sum_probs=153.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe-----cCCceEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQI   75 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv   75 (246)
                      .|++.+.||+|+||+||+|.+..+......+|+|......  .....+.+|+.+++.++||||+++     ......+++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            3566799999999999999976533224478888832222  234578899999999999999998     234445899


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+.+++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++               
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~-~~kl~Dfg~~~~~~~~~~~  180 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESF-TVKVADFGLARDILDREYY  180 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-CEEECCTTSSCTTTTGGGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-cEEeCcCCCcccccCCccc
Confidence            999999999999976321    12223344999999999999999999999999998765 2333               


Q ss_pred             ----------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 ----------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  +|+||+|+++++|++ +.+||...+.......+......+            
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~------------  248 (298)
T 3pls_A          181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP------------  248 (298)
T ss_dssp             CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC------------
T ss_pred             ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC------------
Confidence                                        459999999999999 555566555544444443321111            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                      ....+++++.+|+.+||+.||.+|||+.++++
T Consensus       249 ----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          249 ----------------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------CCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                            01457889999999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.6e-37  Score=249.47  Aligned_cols=206  Identities=19%  Similarity=0.286  Sum_probs=154.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      +++|++.+.||+|+||.||+|.+.. +  +..||+|....    .......+.+|+.+++.++||||+++    ...+..
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLL-D--GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETT-T--CCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcC-C--CceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            3689999999999999999999876 5  77899997322    12234568899999999999999988    456789


Q ss_pred             EEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------  136 (246)
                      ++||||+++++|.+++....  ...+     ..+..|++.||.|||++|++||||||+||+++.++ ..++         
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~-~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG-VVKLGDLGLGRFF  186 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEECCC------
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC-CEEEEeccceeee
Confidence            99999999999999986522  1222     23344999999999999999999999999998766 2333         


Q ss_pred             ------------------------------EEeehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 ------------------------------ARLISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 ------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                    +|+||||+++++|++|..||.+.... ............+.         
T Consensus       187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------  257 (310)
T 2wqm_A          187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP---------  257 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCC---------
T ss_pred             cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCC---------
Confidence                                          35999999999999999999754322 11111111111110         


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                       .....+++++.+|+.+||..||.+|||+.+++++
T Consensus       258 -----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          258 -----------------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             -----------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                             0014578999999999999999999999999853

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.7e-37  Score=251.55  Aligned_cols=204  Identities=13%  Similarity=0.096  Sum_probs=155.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+... ......+.+|+.+++.+ +||||+++    ...+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLY-T--NEYVAIKLEPM-KSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETT-T--TEEEEEEEEET-TCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECC-C--CcEEEEEEecc-ccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            579999999999999999999877 5  78899998332 23456789999999999 89999987    5567899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCe----eeEE-----------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYT----VKIA-----------  137 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~----~~~~-----------  137 (246)
                      ||+ +++|.+++....    ......+..|++.||.|||++||+||||||+|||++.++..    .+++           
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence            999 699999997532    22223344499999999999999999999999999865410    3443           


Q ss_pred             -----------------------------------EeehhhHHHHHHhhCCCCCCCCcchH---HHHHHHHhhCCCCcCc
Q 036362          138 -----------------------------------RLISVGCIFAEMVIQEPLSEDASESR---ERISIFRLMGEPSEET  179 (246)
Q Consensus       138 -----------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~  179 (246)
                                                         |+|||||++++|++|..||.+.....   .+..+......     
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-----  238 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-----  238 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-----
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-----
Confidence                                               49999999999999999998754332   22222221000     


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                         ..........+ ++.+|+.+||+.||..||+++++++
T Consensus       239 -------------------~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          239 -------------------TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -------------------SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------------------CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                               00011123344 9999999999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4e-37  Score=244.91  Aligned_cols=207  Identities=16%  Similarity=0.123  Sum_probs=154.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC----CCCCcchhhhhhcccccCCCCceEEe---cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII----PDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|++..+......||+|....    .......+.+|+.+++.++||||+++   ......++
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            579999999999999999998754231133688888322    22334678899999999999999998   33445899


Q ss_pred             EEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           75 IFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ||||+++++|.+++....    ......+..|++.||.|||++|++||||||+||+++.++ ..++              
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~-~~kl~Dfg~~~~~~~~~~  176 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDD  176 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-EEEECCCTTCEECCC-CC
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCC-CEEEcccccccccccccc
Confidence            999999999999997542    222233444999999999999999999999999998766 2222              


Q ss_pred             ----------------------------EEeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 ----------------------------ARLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                  +|+||+|+++++|++ |..||...........+......+            
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~------------  244 (291)
T 1u46_A          177 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL------------  244 (291)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC------------
T ss_pred             chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCC------------
Confidence                                        459999999999999 999998876655544443311000            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                     .....+++++.+++.+||..||.+|||+.+++++
T Consensus       245 ---------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          245 ---------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             ---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                           0114678999999999999999999999999863

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=252.22  Aligned_cols=209  Identities=13%  Similarity=0.167  Sum_probs=154.4

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-----chhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-----AYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----------   66 (246)
                      ++|++.+.||+|+||.||+|++..+..     .++.||+|....    ...+.+|+.+++.++||||+++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAK----DGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL  117 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEET----TSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecc----cchHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence            589999999999999999999876411     267899998332    2578999999999999999872          


Q ss_pred             ----------cCCceEEEEEeccCcccHHHHHhhhcccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           67 ----------ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        67 ----------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                                ......++||||+ +++|.+++.......+.     .+..||+.||.|||++||+||||||+|||++.++
T Consensus       118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence                      2367899999999 79999999864222333     3344999999999999999999999999999764


Q ss_pred             -CeeeE----------------------------------------------EEeehhhHHHHHHhhCCCCCCCCc-chH
Q 036362          132 -YTVKI----------------------------------------------ARLISVGCIFAEMVIQEPLSEDAS-ESR  163 (246)
Q Consensus       132 -~~~~~----------------------------------------------~Di~slG~i~~~l~~g~~~~~~~~-~~~  163 (246)
                       ...++                                              +|+|||||++++|++|..||.... ...
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  276 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE  276 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence             12333                                              349999999999999999998754 222


Q ss_pred             HHHHHHH-hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          164 ERISIFR-LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       164 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ....... ....+.. ...                   ....+..+++++.+|+.+||..||.+|||+.++++
T Consensus       277 ~~~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          277 DIMKQKQKFVDKPGP-FVG-------------------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHHSCCC-EEC-------------------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhccCChhh-hhh-------------------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            2222222 1111110 000                   00001357899999999999999999999999874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=263.99  Aligned_cols=202  Identities=14%  Similarity=0.090  Sum_probs=158.0

Q ss_pred             Ccccee-eeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            3 KYRKVE-LIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~-~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ++.+.+ .||+|+||.||+|.+.. ...+..||+|+...  .......+.+|+.+++.++||||+++   ...+..++||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRM-RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEEC-SSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEec-CCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEE
Confidence            344555 79999999999998764 22256789998322  23356789999999999999999998   3346799999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE---------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA---------------  137 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~---------------  137 (246)
                      ||+++++|.+++....    ......+..||+.||.|||++||+||||||+|||++.++ ..+++               
T Consensus       415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~-~vkL~DFGla~~~~~~~~~~  493 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH-YAKISDFGLSKALGADDSYY  493 (613)
T ss_dssp             ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-EEEECCCSTTTTCC------
T ss_pred             EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCC-cEEEeeccCcccccCCCcee
Confidence            9999999999986432    222333444999999999999999999999999999766 34444               


Q ss_pred             ---------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          138 ---------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       138 ---------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                 |+|||||+++||++ |+.||.+....+....+......               
T Consensus       494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---------------  558 (613)
T 2ozo_A          494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---------------  558 (613)
T ss_dssp             --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC---------------
T ss_pred             eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence                                       49999999999998 99999987776655555442100               


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                   ..+..+++++.+|+.+||..||.+|||+.+++
T Consensus       559 -------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          559 -------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             -------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             -------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence                         01246889999999999999999999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.2e-36  Score=242.82  Aligned_cols=204  Identities=13%  Similarity=0.105  Sum_probs=154.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+... ......+.+|+.+++.++|++++..     ......++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~-~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIA-A--GEEVAIKLECV-KTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-T--TEEEEEEEEES-CSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcC-C--CcEEEEEEecC-CcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            689999999999999999999876 5  78899998322 2345678999999999998775543     5567889999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEe---cCCCeee--------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN---LSDYTVK--------------  135 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~---~~~~~~~--------------  135 (246)
                      ||+ +++|.+++....    ......+..|++.||.|||++||+||||||+|||++   .++ ..+              
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~-~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN-LVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTT-CEEECCCTTCEECBCTT
T ss_pred             Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCC-eEEEeeCCCcccccccc
Confidence            999 699999997432    222233344999999999999999999999999994   333 222              


Q ss_pred             --------------------------------EEEeehhhHHHHHHhhCCCCCCCCcc---hHHHHHHHHhhCCCCcCcC
Q 036362          136 --------------------------------IARLISVGCIFAEMVIQEPLSEDASE---SRERISIFRLMGEPSEETL  180 (246)
Q Consensus       136 --------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  180 (246)
                                                      .+|+||+||++++|++|+.||.....   ......+.....       
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------  235 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-------  235 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-------
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-------
Confidence                                            24699999999999999999986432   122222222100       


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                       ..........+++++.+|+.+||+.||.+|||+.++++
T Consensus       236 -----------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          236 -----------------STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -----------------HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -----------------CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                             00011223578899999999999999999999999874

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.3e-37  Score=245.86  Aligned_cols=204  Identities=13%  Similarity=0.102  Sum_probs=151.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++.. +  ++.||+|+.. .......+.+|+.+++.++|++++..     ......++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~-~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIA-A--GEEVAIKLEC-VKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETT-T--TEEEEEEEEE-C---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcC-C--CceEEEEeec-ccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            589999999999999999999877 5  7889999722 23344678999999999988776544     5567889999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEE---ecCCCeee--------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALI---NLSDYTVK--------------  135 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~---~~~~~~~~--------------  135 (246)
                      ||+ +++|.+++....    ......+..||+.||.|||++||+||||||+|||+   +.++ ..+              
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~-~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN-LVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTT-CEEECCCTTCEECBCTT
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCC-eEEEecCccceeccCcc
Confidence            999 699999987432    22223334499999999999999999999999999   4333 222              


Q ss_pred             --------------------------------EEEeehhhHHHHHHhhCCCCCCCCcch---HHHHHHHHhhCCCCcCcC
Q 036362          136 --------------------------------IARLISVGCIFAEMVIQEPLSEDASES---RERISIFRLMGEPSEETL  180 (246)
Q Consensus       136 --------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  180 (246)
                                                      .+|+||+||++++|++|+.||.+....   .....+....        
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------  234 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK--------  234 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH--------
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc--------
Confidence                                            236999999999999999999864332   1222211110        


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                      ...........+++++.+|+.+||+.||++|||+.++++
T Consensus       235 ----------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          235 ----------------MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ----------------HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ----------------ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                            000111223567899999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1e-36  Score=241.68  Aligned_cols=199  Identities=20%  Similarity=0.283  Sum_probs=155.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----c----------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----E----------   67 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~----------   67 (246)
                      ++|++.+.||+|+||.||+|.+.. +  ++.||+|....   ....+.+|+.+++.++||||+++    .          
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRI-D--GKTYVIKRVKY---NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETT-T--CCEEEEEEEEC---CSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcC-C--CeEEEEEEecc---ccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            479999999999999999999976 5  77899998332   23578899999999999999987    1          


Q ss_pred             ------CCceEEEEEeccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE
Q 036362           68 ------NDKLVYQIFEYTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI  136 (246)
Q Consensus        68 ------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~  136 (246)
                            .....++||||+++++|.+++.......+..     +..|++.||.|||++||+||||||+||+++.++ ..++
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~kl  163 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK-QVKI  163 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-EEEE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCC-CEEE
Confidence                  1355899999999999999997643333333     334999999999999999999999999999766 3333


Q ss_pred             --------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          137 --------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       137 --------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                            +|+||+|+++++|++|..|+.....  ....+..   .    
T Consensus       164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~~~---~----  234 (284)
T 2a19_B          164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--FFTDLRD---G----  234 (284)
T ss_dssp             CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--HHHHHHT---T----
T ss_pred             CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--HHHHhhc---c----
Confidence                                                  4599999999999999887643211  1111111   0    


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                              .....+++.+.+|+.+||..||.+|||+.|+++|.|.-
T Consensus       235 ------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          235 ------------------------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             ------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------------------------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                                    00135788999999999999999999999999987643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.5e-36  Score=264.79  Aligned_cols=198  Identities=15%  Similarity=0.121  Sum_probs=156.2

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~~~~   81 (246)
                      +.||+|+||.||+|.+.. ...++.||+|+...   .......+.+|+.+++.++||||+++   ...+..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQM-KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEEC-SSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcC-CCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCC
Confidence            479999999999997654 22267899998322   22234679999999999999999998   445568999999999


Q ss_pred             ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------------
Q 036362           82 LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------------  138 (246)
Q Consensus        82 ~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------------  138 (246)
                      ++|.+++....   ......++.||+.||.|||++||+||||||+|||++.++ ..+++|                    
T Consensus       454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~~~~  532 (635)
T 4fl3_A          454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKALRADENYYKAQTHG  532 (635)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-EEEECCTTHHHHTTC-----------
T ss_pred             CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCC-CEEEEEcCCccccccCccccccccCC
Confidence            99999997532   222233444999999999999999999999999999776 444444                    


Q ss_pred             ----------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          139 ----------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       139 ----------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                            +|||||++++|++ |..||.+.........+......+                    
T Consensus       533 ~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~--------------------  592 (635)
T 4fl3_A          533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG--------------------  592 (635)
T ss_dssp             --CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC--------------------
T ss_pred             CCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------------
Confidence                                  9999999999998 999999877766555544421110                    


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                              .+..+++++.+|+.+||..||.+|||+.++++
T Consensus       593 --------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          593 --------CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             --------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                    12467899999999999999999999999875

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=246.48  Aligned_cols=211  Identities=15%  Similarity=0.142  Sum_probs=148.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC------------CcchhhhhhcccccCCCCceEEe---
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG------------VPISILTKISPLKEMDYPLIFRK---   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~E~~~l~~l~~~~i~~~---   66 (246)
                      ++|++.+.||+|+||.||+|.+..+...+..+|+|.......            ....+.+|+..++.++||||+++   
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            479999999999999999999875322377889998332221            22345677788888999999987   


Q ss_pred             -c----CCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeE-
Q 036362           67 -E----NDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKI-  136 (246)
Q Consensus        67 -~----~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~-  136 (246)
                       .    .....++||||+ +++|.+++....   ......+..||+.||.|||++||+||||||+|||++.++ ...++ 
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~  195 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA  195 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence             2    267899999999 799999997643   223333444999999999999999999999999998654 12333 


Q ss_pred             ---------------------------------------------EEeehhhHHHHHHhhCCCCCCCCcch-HHHHHH-H
Q 036362          137 ---------------------------------------------ARLISVGCIFAEMVIQEPLSEDASES-RERISI-F  169 (246)
Q Consensus       137 ---------------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~-~~~~~~-~  169 (246)
                                                                   +|+|||||++++|++|..||...... ...... .
T Consensus       196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  275 (345)
T 2v62_A          196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT  275 (345)
T ss_dssp             CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred             eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence                                                         34999999999999999999653222 111111 1


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhC--CCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILL--PDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .....                      .........  ..+++++.+|+.+||..||.+|||++++++
T Consensus       276 ~~~~~----------------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          276 NLLDE----------------------LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHT----------------------TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             hhccc----------------------ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            11110                      011111111  278999999999999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.3e-36  Score=266.05  Aligned_cols=205  Identities=20%  Similarity=0.212  Sum_probs=160.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|.+..+...+..||+|.....  ......+.+|+.+++.++||||+++   ...+..++||
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~  469 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM  469 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEE
Confidence            4789999999999999999998653323557888873221  2223678899999999999999998   4456789999


Q ss_pred             eccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE---------------
Q 036362           77 EYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA---------------  137 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~---------------  137 (246)
                      ||+++++|.+++.....    .....++.|++.||.|||++||+||||||+|||++.++ ..+++               
T Consensus       470 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~-~vkL~DFG~a~~~~~~~~~~  548 (656)
T 2j0j_A          470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYK  548 (656)
T ss_dssp             ECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-EEEECCCCCCCSCCC-----
T ss_pred             EcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCC-CEEEEecCCCeecCCCccee
Confidence            99999999999975321    12223344999999999999999999999999999766 33333               


Q ss_pred             -------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          138 -------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       138 -------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                               |+||+||++++|++ |..||.+....+....+......+                
T Consensus       549 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~----------------  612 (656)
T 2j0j_A          549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP----------------  612 (656)
T ss_dssp             -----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC----------------
T ss_pred             ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC----------------
Confidence                                     49999999999997 999999877666555554421110                


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                  .++.+++.+.+|+.+||..||.+|||+.++++
T Consensus       613 ------------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          613 ------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             ------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                        12467899999999999999999999999875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.8e-37  Score=245.57  Aligned_cols=205  Identities=14%  Similarity=0.125  Sum_probs=147.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccccc--CCCCceEEe--------cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKE--MDYPLIFRK--------ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~--------~~~~~   71 (246)
                      ++|++.+.||+|+||+||+|++.     ++.||+|+..  ......+.+|.+++..  ++||||+++        .....
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~--~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSWQ-----GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEET-----TEEEEEEEEC--GGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEEC-----CEEEEEEEec--cccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence            58999999999999999999873     5579999832  2234556667666666  789999987        23467


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHh--------hCceeeccCCCCCeEEecCCCee-------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYH--------SNRCLHGRLNPYQALINLSDYTV-------  134 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH--------~~~i~H~Dikp~Nil~~~~~~~~-------  134 (246)
                      .++||||+++++|.+++....  ......+..|++.||.|||        ++||+||||||+|||++.++ ..       
T Consensus        81 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfg~  159 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGL  159 (301)
T ss_dssp             EEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS-CEEECCCTT
T ss_pred             eEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC-CEEEeeCCC
Confidence            899999999999999996532  1222233449999999999        99999999999999998665 11       


Q ss_pred             ------------------------------------------eEEEeehhhHHHHHHhhC----------CCCCCCCcc-
Q 036362          135 ------------------------------------------KIARLISVGCIFAEMVIQ----------EPLSEDASE-  161 (246)
Q Consensus       135 ------------------------------------------~~~Di~slG~i~~~l~~g----------~~~~~~~~~-  161 (246)
                                                                ..+|+||+||++++|++|          ..||..... 
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence                                                      235799999999999999          677754221 


Q ss_pred             ---hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          162 ---SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       162 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                         ...........+...                  .   ..........++++.+|+.+||+.||.+|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQRP------------------N---IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             SCCHHHHHHHHTTSCCCC------------------C---CCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CcchhhhhHHHhccCCCC------------------C---CChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence               112221111100000                  0   0000011235678999999999999999999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=239.16  Aligned_cols=202  Identities=14%  Similarity=0.133  Sum_probs=156.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      .++|++.+.||+|+||.||+|.+..      .+++|.   ..........+.+|+.+++.++||||+++    ...+..+
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA  105 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence            3689999999999999999998855      366776   22334456788999999999999999988    5667899


Q ss_pred             EEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC------------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD------------------  131 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~------------------  131 (246)
                      ++|||+++++|.+++....    ......+..|++.||.|||++||+||||||+||+++...                  
T Consensus       106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC--------
T ss_pred             EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCcccccccccc
Confidence            9999999999999997632    222333444999999999999999999999999998322                  


Q ss_pred             ---------------Ce------------------eeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          132 ---------------YT------------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       132 ---------------~~------------------~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                     .+                  ...+|+|||||++++|++|..||...........+........  
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--  263 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL--  263 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCC--
T ss_pred             ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCC--
Confidence                           00                  1235799999999999999999987766554444333110000  


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                               ....+++++.+++.+||..||.+|||+.++++
T Consensus       264 -------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 -------------------------SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             -------------------------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             -------------------------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                     01257889999999999999999999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=244.04  Aligned_cols=221  Identities=18%  Similarity=0.236  Sum_probs=152.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcc-cccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe------cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK------ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~-~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~~   73 (246)
                      ++|++++.||+|+||.||+|+... ....++.||+|... ........+.+|+.+++.++||||+++      ......+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            469999999999999999998521 01127789999832 223334578899999999999999987      2234789


Q ss_pred             EEEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------------  136 (246)
                      +||||+++++|.+++.....    .....+..|++.||.|||++||+||||||+||+++.++ ..++             
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~-~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-EEEECCCTTCEECCSSC
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCC-cEEEecCcchhhccccc
Confidence            99999999999999976421    12222344999999999999999999999999999766 2223             


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+||||+++++|++|..|+......     ..+..+........    ..
T Consensus       200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~-----~~~~~~~~~~~~~~----~~  270 (326)
T 2w1i_A          200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-----FMRMIGNDKQGQMI----VF  270 (326)
T ss_dssp             SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH-----HHHHHCTTCCTHHH----HH
T ss_pred             cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH-----HHHhhccccchhhh----HH
Confidence                                         45999999999999999887643211     11111111000000    00


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ..........   ....+..+++++.+|+.+||..||.+|||+.|+++
T Consensus       271 ~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          271 HLIELLKNNG---RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHTTC---CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhhcCC---CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            0000000000   00112568899999999999999999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=5.6e-36  Score=245.75  Aligned_cols=212  Identities=14%  Similarity=0.187  Sum_probs=147.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCCCC------------CcchhhhhhcccccCCCCceEEe-
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIPDG------------VPISILTKISPLKEMDYPLIFRK-   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~~~------------~~~~~~~E~~~l~~l~~~~i~~~-   66 (246)
                      ++|++.+.||+|+||.||+|.+..+.  ..++.||+|+......            ......+|+..++.++||||+++ 
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            48999999999999999999887621  1257889998322210            11123334455667789999988 


Q ss_pred             -------cCCceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEe--cCCCe
Q 036362           67 -------ENDKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN--LSDYT  133 (246)
Q Consensus        67 -------~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~--~~~~~  133 (246)
                             ......++||||+ |++|.+++....    ......++.||+.||.|||++||+||||||+|||++  .++ .
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~-~  192 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD-Q  192 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTT-C
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCC-e
Confidence                   1235689999999 799999997642    222233444999999999999999999999999998  433 2


Q ss_pred             eeE----------------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHH
Q 036362          134 VKI----------------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERIS  167 (246)
Q Consensus       134 ~~~----------------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~  167 (246)
                      +++                                              +|+|||||++++|++|..||.+.........
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~  272 (364)
T 3op5_A          193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR  272 (364)
T ss_dssp             EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred             EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence            333                                              3599999999999999999986443322221


Q ss_pred             HHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhh--CCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          168 IFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAIL--LPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      .......+                    .........  ...+++++.+|+..||..||.+|||+.++++
T Consensus       273 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          273 DSKIRYRE--------------------NIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHH--------------------CHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhhh--------------------hHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            11110000                    000000000  1467899999999999999999999999874

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.4e-36  Score=244.94  Aligned_cols=208  Identities=16%  Similarity=0.179  Sum_probs=153.3

Q ss_pred             Cc-cceeeeCCccceEEEEEEEccc-ccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe------cCCceE
Q 036362            3 KY-RKVELIGRGKYGSFYKCEEDVA-ENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK------ENDKLV   72 (246)
Q Consensus         3 ~y-~i~~~lg~G~~g~V~~~~~~~~-~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~   72 (246)
                      +| ++++.||+|+||.||++..... ...++.||+|+.....  .....+.+|+.+++.++||||+++      ......
T Consensus        31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  110 (318)
T 3lxp_A           31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL  110 (318)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred             HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence            45 9999999999999998865321 1227789999833222  224568899999999999999987      235789


Q ss_pred             EEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ++||||+++++|.+++....  ......+..|++.||.|||++||+||||||+||+++.++ ..++              
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~-~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          111 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDR-LVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             EEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCGGGCEECCTTCS
T ss_pred             EEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCC-CEEECCcccccccccccc
Confidence            99999999999999997643  222233444999999999999999999999999998766 2333              


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchH-----------HHHHHHHhhCCCCc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESR-----------ERISIFRLMGEPSE  177 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~  177 (246)
                                                  +|+||+||++++|++|..||.......           ......+.....  
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  267 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG--  267 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT--
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc--
Confidence                                        359999999999999999987543210           000011110000  


Q ss_pred             CcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                            ........+++++.+|+.+||..||.+|||+.|+++
T Consensus       268 ----------------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          268 ----------------------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             ----------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------------------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                                  000112468899999999999999999999999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=244.63  Aligned_cols=229  Identities=18%  Similarity=0.210  Sum_probs=147.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---------cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---------ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---------~~~~~   71 (246)
                      +++|++.+.||+|+||.||+|+..     ++.||+|+.............|+..+..++||||+++         .....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLD-----ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEET-----TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             hHHhheeeecccCCCeEEEEEEEC-----CeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            578999999999999999999763     5679999833222222223344555666899999887         23457


Q ss_pred             EEEEEeccCcccHHHHHhhhcc--cccchHHHHHHHHHHHHhhC---------ceeeccCCCCCeEEecCCCeee-----
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD--IINNPKTAKILRVLSYYHSN---------RCLHGRLNPYQALINLSDYTVK-----  135 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~qil~~L~~lH~~---------~i~H~Dikp~Nil~~~~~~~~~-----  135 (246)
                      +++||||+++++|.+++.....  .....+..||+.||.|||++         ||+||||||+|||++.++ .++     
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~-~~kL~DFG  165 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG-TCVISDFG  165 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS-CEEECCCT
T ss_pred             EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC-cEEEeecc
Confidence            8999999999999999976432  12223444999999999999         999999999999998765 111     


Q ss_pred             -------------------------------------------------EEEeehhhHHHHHHhhCCCCCCCCcc-hHHH
Q 036362          136 -------------------------------------------------IARLISVGCIFAEMVIQEPLSEDASE-SRER  165 (246)
Q Consensus       136 -------------------------------------------------~~Di~slG~i~~~l~~g~~~~~~~~~-~~~~  165 (246)
                                                                       .+|+|||||++++|++|..||..... ....
T Consensus       166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~  245 (336)
T 3g2f_A          166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ  245 (336)
T ss_dssp             TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred             ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence                                                             24799999999999999766533211 1000


Q ss_pred             HHHHH-hhCCCCcCcCCCCCCccccccccCCCCcchhhhhC---CCCChHHHHHHHHhhhcCCCCCCCHHHH------hc
Q 036362          166 ISIFR-LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILL---PDLEPAGVDLLQKMLRVNPKERITVNDA------LN  235 (246)
Q Consensus       166 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~l~~dp~~R~s~~e~------l~  235 (246)
                      ..... ....+.......      .  .............+   ...++++.+|+.+||+.||.+|||+.|+      +-
T Consensus       246 ~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          246 MAFQTEVGNHPTFEDMQV------L--VSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CTTHHHHCSSCCHHHHHH------H--HTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhhhcccCCCchHHHHHh------h--hcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            00000 000000000000      0  00000000000000   1245689999999999999999999999      55


Q ss_pred             CCCCcCCC
Q 036362          236 HHYYRDVV  243 (246)
Q Consensus       236 h~~~~~~~  243 (246)
                      ++|-++-.
T Consensus       318 ~~~~~~~~  325 (336)
T 3g2f_A          318 MIWERNKS  325 (336)
T ss_dssp             HCCCC---
T ss_pred             HHHHhccc
Confidence            77777643

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=4.3e-37  Score=249.43  Aligned_cols=199  Identities=16%  Similarity=0.184  Sum_probs=148.7

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCC-CCceEEe------------cC
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMD-YPLIFRK------------EN   68 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~-~~~i~~~------------~~   68 (246)
                      +|++.+.||+|+||.||+|++.. +  ++.||+|.. .........+.+|+.+++++. ||||+++            ..
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVG-S--GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETT-T--CCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             eEEEEEEEccCCceEEEEEEECC-C--CcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            79999999999999999999977 5  778999973 222333557889999999996 9999987            23


Q ss_pred             CceEEEEEeccCcccHHHHHhhhc-cccc-----chHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCC---------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNFL-DIIN-----NPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSD---------  131 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~-----~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~---------  131 (246)
                      ...++++|||++ ++|.+++.... ...+     ..+..||+.||.|||++|  |+||||||+|||++.++         
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            456899999998 89999886522 1223     233449999999999999  99999999999998765         


Q ss_pred             --------------------------------Ceee------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHH
Q 036362          132 --------------------------------YTVK------------IARLISVGCIFAEMVIQEPLSEDASESRERIS  167 (246)
Q Consensus       132 --------------------------------~~~~------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~  167 (246)
                                                      .+|+            .+|+|||||++++|++|..||.......... 
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-  263 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN-  263 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc-
Confidence                                            1122            2479999999999999999997543321110 


Q ss_pred             HHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          168 IFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                        ....                            .......++.+.+|+.+||+.||.+|||+.|+++|
T Consensus       264 --~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          264 --GKYS----------------------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             ----CC----------------------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             --Cccc----------------------------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence              0000                            00013567789999999999999999999999976

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=5.8e-37  Score=255.47  Aligned_cols=203  Identities=11%  Similarity=0.115  Sum_probs=149.5

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCC-Cc---------------
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDY-PL---------------   62 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~-~~---------------   62 (246)
                      .|++.+.||+|+||.||+|++.. +  ++.||+|+..    ........+.+|+.+++.++| ++               
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~-~--g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQE-T--GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             eEEEecccccCCCEEEEEEEecC-C--CCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            37788999999999999999987 5  7799999832    222335678899999999876 21               


Q ss_pred             eEEe------------cC---CceEEEEEeccCcccHHHHHhhhc-----cccc-----chHHHHHHHHHHHHhhCceee
Q 036362           63 IFRK------------EN---DKLVYQIFEYTGLLNLRKVIKNFL-----DIIN-----NPKTAKILRVLSYYHSNRCLH  117 (246)
Q Consensus        63 i~~~------------~~---~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~-----~~~~~qil~~L~~lH~~~i~H  117 (246)
                      ++.+            ..   ....+++|+.+. ++|.+++....     ...+     ..++.||+.||.|||++||+|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            1111            00   234678888777 99999985221     1111     222349999999999999999


Q ss_pred             ccCCCCCeEEecCCC-------------------------eee-------------------EEEeehhhHHHHHHhhCC
Q 036362          118 GRLNPYQALINLSDY-------------------------TVK-------------------IARLISVGCIFAEMVIQE  153 (246)
Q Consensus       118 ~Dikp~Nil~~~~~~-------------------------~~~-------------------~~Di~slG~i~~~l~~g~  153 (246)
                      |||||+|||++.++.                         +|+                   .+|+|||||++++|++|+
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~  314 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD  314 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence            999999999997761                         111                   457999999999999999


Q ss_pred             CCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHH
Q 036362          154 PLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA  233 (246)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~  233 (246)
                      .||...........                                 .......+++++.+|+.+||..||.+|||+.++
T Consensus       315 ~Pf~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~  361 (413)
T 3dzo_A          315 LPNTDDAALGGSEW---------------------------------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA  361 (413)
T ss_dssp             CCCCTTGGGSCSGG---------------------------------GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCcchhhhHHH---------------------------------HHhhcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            99976543211000                                 000124678999999999999999999999999


Q ss_pred             hcCCCCcCC
Q 036362          234 LNHHYYRDV  242 (246)
Q Consensus       234 l~h~~~~~~  242 (246)
                      ++||||+++
T Consensus       362 l~~~~~~~~  370 (413)
T 3dzo_A          362 METPEYEQL  370 (413)
T ss_dssp             TTSHHHHHH
T ss_pred             HhCHHHHHH
Confidence            999999864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.6e-36  Score=243.39  Aligned_cols=213  Identities=14%  Similarity=0.150  Sum_probs=151.8

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhcccc-----CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-----IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-----~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      |...+.||+|+||.||+|...     +..||+|...     ........+.+|+.+++.++||||+++    ...+..++
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  107 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVN-----NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCL  107 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESS-----SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cccCCccccCCCeEEEEEEEC-----CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEE
Confidence            455689999999999999873     4568888722     122335678899999999999999988    56678999


Q ss_pred             EEeccCcccHHHHHhhhcc-cccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD-IINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~-~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      +|||+++++|.+++..... ..+..     +..|++.||.|||++||+||||||+||+++.++ .+++            
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~-~~kl~Dfg~~~~~~~~  186 (307)
T 2nru_A          108 VYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF-TAKISDFGLARASEKF  186 (307)
T ss_dssp             EEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-CEEECCCTTCEECCSC
T ss_pred             EEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC-cEEEeecccccccccc
Confidence            9999999999999875321 12322     334999999999999999999999999998665 2222            


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||||+++++|++|..||...........+.........       ....
T Consensus       187 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~  259 (307)
T 2nru_A          187 AQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK-------TIED  259 (307)
T ss_dssp             SSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC-------CHHH
T ss_pred             cccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh-------hhhh
Confidence                                        45999999999999999999865543322222211111000       0000


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      +..       ..........++.+.+++.+||..||.+|||+.+++++
T Consensus       260 ~~~-------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          260 YID-------KKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HSC-------SSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             hcc-------ccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            000       00000112345789999999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=6.5e-36  Score=252.86  Aligned_cols=203  Identities=12%  Similarity=0.098  Sum_probs=153.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCc-eEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL-IFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~----~~~~~~~lv~   76 (246)
                      ++|++.++||+|+||.||+|.+.. +  ++.||+|+... ......+.+|+.+++.++|.+ +..+    ...+..++||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~-~--~~~vAvK~~~~-~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQ-T--NEEVAIKLENV-KTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETT-T--CCEEEEEEEET-TCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECC-C--CcEEEEEEecc-ccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            689999999999999999999876 5  78899998332 234457899999999998644 3333    5677889999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEe---cCCCeeeE-------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN---LSDYTVKI-------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~---~~~~~~~~-------------  136 (246)
                      ||+ +++|.+++....    ......++.||+.||.|||++||+||||||+|||++   .++ ..++             
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~-~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTT-CEEECCCTTCEECBCTT
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCC-eEEEEeCCcceeccCCc
Confidence            999 699999997432    222333444999999999999999999999999994   333 2333             


Q ss_pred             ---------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHH---HHHHHHhhCCCCcCcC
Q 036362          137 ---------------------------------ARLISVGCIFAEMVIQEPLSEDASESRE---RISIFRLMGEPSEETL  180 (246)
Q Consensus       137 ---------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  180 (246)
                                                       +|+|||||++++|++|..||.+......   +..+....        
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------  232 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--------  232 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH--------
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc--------
Confidence                                             3599999999999999999987544322   22222210        


Q ss_pred             CCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                      ...........+++++.+|+.+||..||.+||++.+++
T Consensus       233 ----------------~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          233 ----------------VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             ----------------HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             ----------------ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHH
Confidence                            00111222357889999999999999999999999876

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-36  Score=243.77  Aligned_cols=207  Identities=17%  Similarity=0.124  Sum_probs=143.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccccc--CCCCceEEe----cCC----ce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKE--MDYPLIFRK----END----KL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~----~~~----~~   71 (246)
                      ++|++.+.||+|+||.||+|++.     +..||+|+....  ......+|.+++..  ++||||+++    ...    ..
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-----GEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-----TEEEEEEEEEGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-----CceEEEEEEecc--ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence            47999999999999999999874     557899983322  23344445444444  589999988    222    68


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhC--------ceeeccCCCCCeEEecCC----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSN--------RCLHGRLNPYQALINLSD----------  131 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~--------~i~H~Dikp~Nil~~~~~----------  131 (246)
                      .++||||+++++|.+++....  ......+..|++.||.|||++        ||+||||||+|||++.++          
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            999999999999999997532  222233444999999999999        999999999999998665          


Q ss_pred             -----------------------Ceee---------------EEEeehhhHHHHHHhhCCC----------CCCCCcc--
Q 036362          132 -----------------------YTVK---------------IARLISVGCIFAEMVIQEP----------LSEDASE--  161 (246)
Q Consensus       132 -----------------------~~~~---------------~~Di~slG~i~~~l~~g~~----------~~~~~~~--  161 (246)
                                             .+|+               .+|+|||||++++|++|..          ||.....  
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  269 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD  269 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence                                   0111               1589999999999999944          4432111  


Q ss_pred             --hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          162 --SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       162 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                        .............                   ....+  .......+++++.+|+.+||+.||++|||+.|+++|
T Consensus       270 ~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          270 PSYEDMREIVCIKKL-------------------RPSFP--NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCHHHHHHHHTTSCC-------------------CCCCC--GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CchhhhHHHHhhhcc-------------------Ccccc--ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence              1111111110000                   00000  000012456789999999999999999999999875

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=6.7e-37  Score=248.66  Aligned_cols=207  Identities=15%  Similarity=0.116  Sum_probs=141.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---------CCCcchhhhhhcccccCC---------CCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---------DGVPISILTKISPLKEMD---------YPLI   63 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~---------~~~i   63 (246)
                      ++|++.+.||+|+||+||+|++   +  ++.||+|+....         ......+.+|+.+++.++         ||||
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~---~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni   94 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA---D--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF   94 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE---T--TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred             ccchheeeecccCceEEEEEEe---C--CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence            5799999999999999999988   2  568999982221         122367889999988886         5555


Q ss_pred             EEe---------------------c-------------CCceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHH
Q 036362           64 FRK---------------------E-------------NDKLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVL  107 (246)
Q Consensus        64 ~~~---------------------~-------------~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L  107 (246)
                      +++                     .             ..+..++||||+++|++.+.+.+.  ++.....++.||+.||
T Consensus        95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHH
T ss_pred             hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            443                     1             268999999999988766665432  2334444555999999


Q ss_pred             HHHh-hCceeeccCCCCCeEEecCC-------------------CeeeEEE-----------------------------
Q 036362          108 SYYH-SNRCLHGRLNPYQALINLSD-------------------YTVKIAR-----------------------------  138 (246)
Q Consensus       108 ~~lH-~~~i~H~Dikp~Nil~~~~~-------------------~~~~~~D-----------------------------  138 (246)
                      .||| ++||+||||||+|||++.++                   ...+++|                             
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~~  254 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGD  254 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCSS
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCCc
Confidence            9999 99999999999999999774                   2667777                             


Q ss_pred             ----eehhhHH-HHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHH
Q 036362          139 ----LISVGCI-FAEMVIQEPLSEDASESR-ERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAG  212 (246)
Q Consensus       139 ----i~slG~i-~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (246)
                          +||+|++ .++++.|..||....... ....+....                      ..........++.+++++
T Consensus       255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~s~~~  312 (336)
T 2vuw_A          255 YQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM----------------------TFKTKCNTPAMKQIKRKI  312 (336)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC----------------------CCSSCCCSHHHHHHHHHH
T ss_pred             cceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh----------------------ccCcccchhhhhhcCHHH
Confidence                5665554 445555655553211100 111111100                      000011111223578899


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHh-cCCCCc
Q 036362          213 VDLLQKMLRVNPKERITVNDAL-NHHYYR  240 (246)
Q Consensus       213 ~~ll~~~l~~dp~~R~s~~e~l-~h~~~~  240 (246)
                      ++||++||+.|     ||.|+| +||||+
T Consensus       313 ~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          313 QEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             HHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            99999999977     999999 999996

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=7.7e-35  Score=236.85  Aligned_cols=206  Identities=14%  Similarity=0.084  Sum_probs=148.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhccccc--CCCCceEEe----cCC----ce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKE--MDYPLIFRK----END----KL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~----~~~----~~   71 (246)
                      ++|++.+.||+|+||.||+|++.     ++.||+|...  ......+.+|.+++..  ++||||+++    ...    ..
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~vavK~~~--~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-----GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-----TEEEEEEEEC--GGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-----CccEEEEEeC--chhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            47999999999999999999873     5578999832  2334567888888877  789999988    222    37


Q ss_pred             EEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHh--------hCceeeccCCCCCeEEecCCCee-------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYH--------SNRCLHGRLNPYQALINLSDYTV-------  134 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH--------~~~i~H~Dikp~Nil~~~~~~~~-------  134 (246)
                      .++||||+++++|.+++.+..  ......+..|++.||.|||        ++||+||||||+|||++.++ ..       
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Dfg~  193 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGL  193 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS-CEEECCCTT
T ss_pred             eEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC-CEEEEECCC
Confidence            999999999999999997632  2222334449999999999        89999999999999998665 11       


Q ss_pred             ------------------------------------------eEEEeehhhHHHHHHhhC----------CCCCCCCcc-
Q 036362          135 ------------------------------------------KIARLISVGCIFAEMVIQ----------EPLSEDASE-  161 (246)
Q Consensus       135 ------------------------------------------~~~Di~slG~i~~~l~~g----------~~~~~~~~~-  161 (246)
                                                                ..+|+|||||++++|++|          ..||..... 
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~  273 (342)
T 1b6c_B          194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  273 (342)
T ss_dssp             CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence                                                      236899999999999999          566654321 


Q ss_pred             ---hHHHHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          162 ---SRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       162 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                         ..............                  +..+ .  .......++.+.+|+.+||..||++|||+.++++|
T Consensus       274 ~~~~~~~~~~~~~~~~~------------------~~~~-~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          274 DPSVEEMRKVVCEQKLR------------------PNIP-N--RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             SCCHHHHHHHHTTSCCC------------------CCCC-G--GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhC------------------CCCc-c--cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence               11111111100000                  0000 0  00012345689999999999999999999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=237.14  Aligned_cols=195  Identities=12%  Similarity=0.163  Sum_probs=145.3

Q ss_pred             CCccceeeeCCccceEEEEEE-----EcccccchhhhhhccccCCCCCcchhhhhhcccccCC---CCceEEe----cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCE-----EDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD---YPLIFRK----END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~-----~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~----~~~   69 (246)
                      ++|++.+.||+|+||.||+|.     ... .  ++.||+|+.  .......+.+|+.+++.++   |+||+++    ...
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~--~~~vavK~~--~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAK-N--KQKFVLKVQ--KPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC--------C--CCCEEEEEE--SSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccc-c--CcEEEEEEe--CCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            469999999999999999995     333 3  788999983  3345667888888888886   8999887    567


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---cccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEec-----------C
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINL-----------S  130 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~-----------~  130 (246)
                      +..++||||+++++|.+++....   ...+     ..++.||+.||.|||++||+||||||+|||++.           +
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence            88999999999999999997521   2233     334449999999999999999999999999986           3


Q ss_pred             CCeeeEE-----------------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHH
Q 036362          131 DYTVKIA-----------------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIF  169 (246)
Q Consensus       131 ~~~~~~~-----------------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~  169 (246)
                      + ..+++                                         |+|||||++++|++|+.||.......      
T Consensus       220 ~-~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------  292 (365)
T 3e7e_A          220 A-GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------  292 (365)
T ss_dssp             T-TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE------
T ss_pred             C-CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc------
Confidence            3 33443                                         49999999999999999986432210      


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                              .....         .+..          ...++.+.+++..||..+|..|++..+.+.
T Consensus       293 --------~~~~~---------~~~~----------~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~  331 (365)
T 3e7e_A          293 --------CKPEG---------LFRR----------LPHLDMWNEFFHVMLNIPDCHHLPSLDLLR  331 (365)
T ss_dssp             --------EEECS---------CCTT----------CSSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred             --------eeech---------hccc----------cCcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence                    00000         0000          123567899999999999999976555443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.9e-36  Score=262.89  Aligned_cols=200  Identities=20%  Similarity=0.278  Sum_probs=149.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC--CCCcchhhhhhcccccCCCCceEEe----cCCc-----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--DGVPISILTKISPLKEMDYPLIFRK----ENDK-----   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~-----   70 (246)
                      ++|++.+.||+|+||.||+|.+...+  ++.||+|.....  ......+.+|+.+++.++||||+++    ...+     
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVN--GRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGT--TEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCC--CcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            68999999999999999999987534  678999973222  1223467899999999999999988    1111     


Q ss_pred             eEEEEEeccCcccHHHHHhh-hcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE------------
Q 036362           71 LVYQIFEYTGLLNLRKVIKN-FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------------  137 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~------------  137 (246)
                      ..|+||||++|++|.+++.. .+......+..||+.||.|||++||+||||||+|||++.+  ..+++            
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~--~~kl~DFG~a~~~~~~~  235 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE--QLKLIDLGAVSRINSFG  235 (681)
T ss_dssp             EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS--CEEECCCTTCEETTCCS
T ss_pred             eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC--cEEEEecccchhcccCC
Confidence            26999999999999888754 1122333344599999999999999999999999999864  33444            


Q ss_pred             ----------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          138 ----------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       138 ----------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                            |+|||||++++|++|.+||.+....          +.+                   .
T Consensus       236 ~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------~~~-------------------~  286 (681)
T 2pzi_A          236 YLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD----------GLP-------------------E  286 (681)
T ss_dssp             CCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS----------SCC-------------------T
T ss_pred             ccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc----------ccc-------------------c
Confidence                                  5999999999999998887642110          000                   0


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                      .  ..    ....++.+.+|+.+||..||.+||++.+++.|+|+.
T Consensus       287 ~--~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          287 D--DP----VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             T--CH----HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             c--cc----ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            0  00    012467899999999999999999999999888864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=3.6e-27  Score=203.16  Aligned_cols=143  Identities=11%  Similarity=0.017  Sum_probs=106.6

Q ss_pred             eCCccceEEEEEEEcccccchhhhhhccccCC-----------CCCcchhhhhhcccccC-CCCceEEe----cCCceEE
Q 036362           10 IGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-----------DGVPISILTKISPLKEM-DYPLIFRK----ENDKLVY   73 (246)
Q Consensus        10 lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~   73 (246)
                      .+.|+.|.+..++..- .  ++.+++|+....           +...+.+.+|+++|+++ .|+||+++    ++++..|
T Consensus       242 ~~~~~~~~h~~~rr~~-f--g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y  318 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYF-F--GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW  318 (569)
T ss_dssp             -C--------CCEEEE-E--CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred             cccCCccccccccccc-c--cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence            4566666666655544 4  777888883221           12235689999999999 69999987    7888999


Q ss_pred             EEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      |||||++|++|.+++..........++.||+.||.|+|++|||||||||+|||++.+| .+|++|               
T Consensus       319 LVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg-~vKL~DFGlAr~~~~~~~~~~  397 (569)
T 4azs_A          319 LVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ-HARLIDFGSIVTTPQDCSWPT  397 (569)
T ss_dssp             EEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS-CEEECCCTTEESCC---CCSH
T ss_pred             EEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCC-CEEEeecccCeeCCCCCcccc
Confidence            9999999999999998876555666777999999999999999999999999999776 788988               


Q ss_pred             --eehhhHHHHHHhhCCCCC
Q 036362          139 --LISVGCIFAEMVIQEPLS  156 (246)
Q Consensus       139 --i~slG~i~~~l~~g~~~~  156 (246)
                        +||.|++.+|++.|..++
T Consensus       398 t~vGTp~YmAPE~l~g~~~~  417 (569)
T 4azs_A          398 NLVQSFFVFVNELFAENKSW  417 (569)
T ss_dssp             HHHHHHHHHHHHHC------
T ss_pred             CceechhhccHHHhCCCCCC
Confidence              689999999999987544

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.87  E-value=5e-23  Score=162.78  Aligned_cols=127  Identities=14%  Similarity=0.188  Sum_probs=98.9

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC-------------------CcchhhhhhcccccCCCCceE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-------------------VPISILTKISPLKEMDYPLIF   64 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~-------------------~~~~~~~E~~~l~~l~~~~i~   64 (246)
                      |++.+.||+|+||.||+|.+ . +  ++.||+|.......                   ....+.+|+.+++.++|.++.
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~-~--g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~  167 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-E-K--FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVP  167 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-T-T--TEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred             EEecCEeccCCCceEEEEEe-C-C--CCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcC
Confidence            44569999999999999999 4 4  78899998321111                   134578999999999855555


Q ss_pred             EecCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEee
Q 036362           65 RKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLI  140 (246)
Q Consensus        65 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di~  140 (246)
                      .+...+..++||||++|++|.+ +..   .....+..|++.||.|||++||+||||||+|||++ ++ .++++|+.
T Consensus       168 ~~~~~~~~~lvmE~~~g~~L~~-l~~---~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~-~vkl~DFG  237 (282)
T 1zar_A          168 KVYAWEGNAVLMELIDAKELYR-VRV---ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE-GIWIIDFP  237 (282)
T ss_dssp             CEEEEETTEEEEECCCCEEGGG-CCC---SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT-EEEECCCT
T ss_pred             eEEeccceEEEEEecCCCcHHH-cch---hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC-cEEEEECC
Confidence            5444466799999999999988 422   33445666999999999999999999999999999 54 88998863

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.84  E-value=9.1e-22  Score=168.65  Aligned_cols=120  Identities=16%  Similarity=0.084  Sum_probs=90.6

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC---------cchhhhhhcccccCCCCceEE--e--cCCceEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV---------PISILTKISPLKEMDYPLIFR--K--ENDKLVY   73 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~---------~~~~~~E~~~l~~l~~~~i~~--~--~~~~~~~   73 (246)
                      .+.||+|+||.||+|...     +..+++|........         .+++.+|++++++++||||++  .  ...+..+
T Consensus       341 ~~~LG~G~fg~Vy~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYL-----DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             -------CCEEEEEEECS-----SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred             CCEEeeCCCEEEEEEEEC-----CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence            468999999999999543     345666652111111         234789999999999999994  3  4455679


Q ss_pred             EEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEe
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL  139 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di  139 (246)
                      +||||++|++|.+++..     ...+..|++.||.|||++||+||||||+|||++.   ..+++|+
T Consensus       416 lVmE~~~ggsL~~~l~~-----~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~---~~kL~DF  473 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED-----NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK---DLYIIDF  473 (540)
T ss_dssp             EEEECCCSEEHHHHSTT-----CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS---SEEECCC
T ss_pred             EEEECCCCCCHHHHHHH-----HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC---eEEEEEC
Confidence            99999999999999986     4566779999999999999999999999999996   7888885

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.83  E-value=1.5e-21  Score=152.53  Aligned_cols=131  Identities=11%  Similarity=0.052  Sum_probs=97.0

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhh--hhhccccCCCCC-------------------------cchhhhhhcccc
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQT--VLLKADIIPDGV-------------------------PISILTKISPLK   56 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~--vaiK~~~~~~~~-------------------------~~~~~~E~~~l~   56 (246)
                      |++.+.||+|+||.||+|.+.. +  +..  ||+|+.......                         ...+.+|+.++.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~-~--g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  125 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVF-D--GKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE  125 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEE-T--TEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcC-C--CcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence            6788999999999999999844 3  667  999972211101                         025788999999


Q ss_pred             cCCCCceE--EecCCceEEEEEeccCc-c----cHHHHHhhhcccccchHHHHHHHHHHHHh-hCceeeccCCCCCeEEe
Q 036362           57 EMDYPLIF--RKENDKLVYQIFEYTGL-L----NLRKVIKNFLDIINNPKTAKILRVLSYYH-SNRCLHGRLNPYQALIN  128 (246)
Q Consensus        57 ~l~~~~i~--~~~~~~~~~lv~e~~~~-~----~L~~~~~~~~~~~~~~~~~qil~~L~~lH-~~~i~H~Dikp~Nil~~  128 (246)
                      .+.|+++.  .....+..++||||+++ |    +|.++...........+..|++.||.||| ++||+||||||+|||++
T Consensus       126 ~l~~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~  205 (258)
T 1zth_A          126 RAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI  205 (258)
T ss_dssp             HHHHTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEES
T ss_pred             HHHhCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEc
Confidence            98776542  11222457899999952 3    78777654434455666669999999999 99999999999999998


Q ss_pred             cCCCeeeEEEee
Q 036362          129 LSDYTVKIARLI  140 (246)
Q Consensus       129 ~~~~~~~~~Di~  140 (246)
                      .   .++++|+.
T Consensus       206 ~---~~~liDFG  214 (258)
T 1zth_A          206 D---KVYFIDMG  214 (258)
T ss_dssp             S---SEEECCCT
T ss_pred             C---cEEEEECc
Confidence            5   68888853

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.78  E-value=2.1e-20  Score=152.18  Aligned_cols=121  Identities=14%  Similarity=0.116  Sum_probs=83.0

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC------cch-----------------hhhhhcccccCCC
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV------PIS-----------------ILTKISPLKEMDY   60 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~-----------------~~~E~~~l~~l~~   60 (246)
                      |++.+.||+|++|.||+|.+..    ++.||+|+.......      ...                 ..+|...|..+.+
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~----G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~  172 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEK----GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE  172 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTT----CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCEeeeCCceEEEEEECCC----CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence            7899999999999999998865    778999982111100      011                 1234444554433


Q ss_pred             CceEEe--cCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           61 PLIFRK--ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        61 ~~i~~~--~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      .++...  ......++||||++|.+|.++...   ........|++.+|.+||++|||||||||.|||++.++
T Consensus       173 ~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~---~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          173 EGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV---PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             TTCSCCCEEEEETTEEEEECCSCEEGGGCCCC---SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             cCCCCCeeeeccCceEEEEecCCccHhhhccc---HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            332111  111234799999999988655432   23344556999999999999999999999999999765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.28  E-value=6.2e-12  Score=98.00  Aligned_cols=129  Identities=13%  Similarity=0.107  Sum_probs=93.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC-CCCCcchhhhhhcccccCC-C---CceEEe-cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII-PDGVPISILTKISPLKEMD-Y---PLIFRK-ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~-~---~~i~~~-~~~~~~~lv   75 (246)
                      +.|++...++.|+.+.||++...     +..+++|.... .......+.+|..+++.+. +   |.++.. ...+..|+|
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~-----~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE-----NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS-----SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC-----CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            57888899999999999998753     44688998322 1133457899999998874 3   334433 456788999


Q ss_pred             EeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhh-------------------------------------------
Q 036362           76 FEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS-------------------------------------------  112 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~-------------------------------------------  112 (246)
                      ||+++|.+|.+....  .........++..+|..||+                                           
T Consensus        89 ~e~i~G~~l~~~~~~--~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (263)
T 3tm0_A           89 MSEADGVLCSEEYED--EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD  166 (263)
T ss_dssp             EECCSSEEHHHHCCT--TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred             EEecCCeehhhccCC--cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence            999999999876321  11222344589999999998                                           


Q ss_pred             ----------------CceeeccCCCCCeEEecCCCeeeEEE
Q 036362          113 ----------------NRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       113 ----------------~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                                      ..++|||++|.||+++. +....++|
T Consensus       167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~-~~~~~lID  207 (263)
T 3tm0_A          167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD-GKVSGFID  207 (263)
T ss_dssp             HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET-TEEEEECC
T ss_pred             HHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC-CcEEEEEE
Confidence                            45899999999999984 43456778

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.18  E-value=2.8e-11  Score=93.94  Aligned_cols=124  Identities=7%  Similarity=0.026  Sum_probs=83.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCce-----EEe-cCCceEEEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI-----FRK-ENDKLVYQIF   76 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~-~~~~~~~lv~   76 (246)
                      .|.+....+.|..+.||++....    +..+++|.....  ....+.+|..+++.+.+.++     +.. ...+..++||
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~----g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~   94 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQG----RPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL   94 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTT----SCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred             CCceEecccCCCCceEEEEecCC----CCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence            44554443456669999996543    567889983322  34678899999988854343     222 4456789999


Q ss_pred             eccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCc------------------------------------------
Q 036362           77 EYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNR------------------------------------------  114 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~------------------------------------------  114 (246)
                      |+++|.+|.  ...   ........++...|..||+..                                          
T Consensus        95 e~i~G~~l~--~~~---~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
T 1nd4_A           95 GEVPGQDLL--SSH---LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE  169 (264)
T ss_dssp             ECCSSEETT--TSC---CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred             EecCCcccC--cCc---CCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence            999988884  211   111234447777777777643                                          


Q ss_pred             ----------------eeeccCCCCCeEEecCCCeeeEEE
Q 036362          115 ----------------CLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       115 ----------------i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                                      ++|||++|.||+++. +....++|
T Consensus       170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~-~~~~~liD  208 (264)
T 1nd4_A          170 LFARLKARMPDGEDLVVTHGDACLPNIMVEN-GRFSGFID  208 (264)
T ss_dssp             HHHHHHHTCCSSCCEEEECSSCCGGGEEEET-TEEEEECC
T ss_pred             HHHHHHHhcCCCCCeEEECCCCCCCcEEEEC-CcEEEEEc
Confidence                            999999999999984 33455778

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.85  E-value=2e-09  Score=87.70  Aligned_cols=128  Identities=13%  Similarity=0.171  Sum_probs=82.0

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCC--CCcchhhhhhcccccCCC-----CceEEe-cCC---ceE
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPD--GVPISILTKISPLKEMDY-----PLIFRK-END---KLV   72 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~--~~~~~~~~E~~~l~~l~~-----~~i~~~-~~~---~~~   72 (246)
                      .++.|+.|.++.||++....     ..+++|...  ...  .....+.+|..+++.+..     |.++.. .+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-----~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-----QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-----CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEECC-----ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence            46788999999999987643     357778733  211  224578889999998863     333333 222   458


Q ss_pred             EEEEeccCcccHHHH-HhhhcccccchHHHHHHHHHHHHhh---------------------------------------
Q 036362           73 YQIFEYTGLLNLRKV-IKNFLDIINNPKTAKILRVLSYYHS---------------------------------------  112 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~-~~~~~~~~~~~~~~qil~~L~~lH~---------------------------------------  112 (246)
                      ++|||+++|.++.+. ....+.........+++.+|..||+                                       
T Consensus       117 ~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             EEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             EEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            899999998777431 1111111112234488888888886                                       


Q ss_pred             -------------------CceeeccCCCCCeEEecCCC-eeeEEE
Q 036362          113 -------------------NRCLHGRLNPYQALINLSDY-TVKIAR  138 (246)
Q Consensus       113 -------------------~~i~H~Dikp~Nil~~~~~~-~~~~~D  138 (246)
                                         ..++|||++|.||+++.++. ...++|
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viD  242 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLD  242 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECC
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEEC
Confidence                               46999999999999997653 346777

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.43  E-value=3.8e-08  Score=78.19  Aligned_cols=71  Identities=14%  Similarity=0.220  Sum_probs=46.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-C-----CceEEe-cCC---ceEEEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-Y-----PLIFRK-END---KLVYQIF   76 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~-----~~i~~~-~~~---~~~~lv~   76 (246)
                      ++.++.|....||++.        ..+++|+... ......+.+|..+++.+. +     |.++.. ...   ...|+||
T Consensus        25 i~~~~~G~~n~v~~v~--------~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN--------RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CCEEEECSSEEEEEST--------TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             eEecCCCCcceEEEEC--------CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            4568899999999763        2477887321 123467888999887763 2     333333 122   2458899


Q ss_pred             eccCcccHHH
Q 036362           77 EYTGLLNLRK   86 (246)
Q Consensus        77 e~~~~~~L~~   86 (246)
                      ++++|.+|.+
T Consensus        96 ~~i~G~~l~~  105 (304)
T 3sg8_A           96 TKIKGVPLTP  105 (304)
T ss_dssp             ECCCCEECCH
T ss_pred             cccCCeECCc
Confidence            9999888764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.22  E-value=1.9e-06  Score=71.02  Aligned_cols=73  Identities=14%  Similarity=0.162  Sum_probs=45.1

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCC--------CCCcchhhhhhcccccCCC--CceE-Ee--cCCceEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP--------DGVPISILTKISPLKEMDY--PLIF-RK--ENDKLVY   73 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~~--~~i~-~~--~~~~~~~   73 (246)
                      .+.||.|.++.||+++... .  +..+++|.....        .....+..+|.++++.+..  +..+ ++  .+....+
T Consensus        35 ~~~lg~G~~n~vyrv~~~~-~--~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~  111 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQE-H--DRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAV  111 (397)
T ss_dssp             EEECCSSSSEEEEEEEC-------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTE
T ss_pred             EEECCCCceEEEEEEEECC-C--CcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcCCccE
Confidence            5678999999999997644 3  556888862111        1234456788888887632  2222 22  2334568


Q ss_pred             EEEeccCcc
Q 036362           74 QIFEYTGLL   82 (246)
Q Consensus        74 lv~e~~~~~   82 (246)
                      +|||++++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999863

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.12  E-value=5.5e-06  Score=64.36  Aligned_cols=75  Identities=13%  Similarity=0.110  Sum_probs=50.7

Q ss_pred             eeCCccce-EEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC----CCceEEe-cCCceEEEEEeccCcc
Q 036362            9 LIGRGKYG-SFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD----YPLIFRK-ENDKLVYQIFEYTGLL   82 (246)
Q Consensus         9 ~lg~G~~g-~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~----~~~i~~~-~~~~~~~lv~e~~~~~   82 (246)
                      .+..|..+ .||+..... .  +..+++|...  ......+.+|...|+.+.    -|.++.. .+.+..++||++++|.
T Consensus        31 ~~~~G~S~~~v~rl~~~~-~--~~~~~lk~~~--~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~  105 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKP-N--APELFLKHGK--GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK  105 (272)
T ss_dssp             EEECSSSSCEEEEEECCT-T--CCCEEEEEEE--THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred             EccCCCcCCeEEEEEecC-C--CeEEEEEECC--CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence            34455554 689877654 3  5678888822  223456788888887764    3555544 5567889999999988


Q ss_pred             cHHHHH
Q 036362           83 NLRKVI   88 (246)
Q Consensus        83 ~L~~~~   88 (246)
                      ++.+..
T Consensus       106 ~~~~~~  111 (272)
T 4gkh_A          106 TAFQVL  111 (272)
T ss_dssp             EHHHHH
T ss_pred             cccccc
Confidence            876654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.09  E-value=3e-06  Score=67.32  Aligned_cols=71  Identities=13%  Similarity=-0.012  Sum_probs=47.9

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC------CceEEe--cCCceEEEEEec
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY------PLIFRK--ENDKLVYQIFEY   78 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~--~~~~~~~lv~e~   78 (246)
                      ++.++.|....||+.   .     ..+++|+.. .......+.+|..+|+.+.+      |.++..  ...+..+++|++
T Consensus        24 v~~l~~G~~n~v~~v---g-----~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---N-----GDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE---T-----TTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE---C-----CEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence            456788888899987   2     246788731 12234578899999998864      222222  234567899999


Q ss_pred             cCcccHHH
Q 036362           79 TGLLNLRK   86 (246)
Q Consensus        79 ~~~~~L~~   86 (246)
                      ++|.++.+
T Consensus        95 i~G~~l~~  102 (306)
T 3tdw_A           95 VQGQILGE  102 (306)
T ss_dssp             CCSEECHH
T ss_pred             cCCeECch
Confidence            99887765

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.66  E-value=3.8e-05  Score=60.30  Aligned_cols=73  Identities=12%  Similarity=-0.032  Sum_probs=48.9

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCC-CCCcchhhhhhcccccCCC------CceEEecCCceEEEEE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP-DGVPISILTKISPLKEMDY------PLIFRKENDKLVYQIF   76 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~------~~i~~~~~~~~~~lv~   76 (246)
                      ..-++.+|.|..+.||+.+..+    ++.+++|+.... ......+..|...|+.+..      |-++..   +..+++|
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~D----G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---~~~~lv~   89 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELAD----GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---DDRTLAM   89 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT----SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---ETTEEEE
T ss_pred             eEEEEecCCCCCeEEEEEEECC----CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---cCceEEE
Confidence            3446778999999999998765    677889983322 2233457789888887742      222222   2347899


Q ss_pred             eccCccc
Q 036362           77 EYTGLLN   83 (246)
Q Consensus        77 e~~~~~~   83 (246)
                      |++++..
T Consensus        90 e~l~~~~   96 (288)
T 3f7w_A           90 EWVDERP   96 (288)
T ss_dssp             ECCCCCC
T ss_pred             EeecccC
Confidence            9987543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.61  E-value=0.00035  Score=55.87  Aligned_cols=69  Identities=14%  Similarity=0.190  Sum_probs=39.3

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----CCceEEe-------cCCceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----YPLIFRK-------ENDKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~-------~~~~~~~l   74 (246)
                      ++.|+.|..+.||++....    + .+++|....   ....+..|..+++.+.     .|.++..       ...+..++
T Consensus        37 ~~~l~gG~~n~~~~v~~~~----~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~  108 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDS----G-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV  108 (346)
T ss_dssp             EEECC----CEEEEEEETT----E-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred             eeeccccccCcEEEEEeCC----C-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence            3456667789999987644    3 377887332   2234455666665553     2444431       13457889


Q ss_pred             EEeccCccc
Q 036362           75 IFEYTGLLN   83 (246)
Q Consensus        75 v~e~~~~~~   83 (246)
                      +|++++|.+
T Consensus       109 l~~~i~G~~  117 (346)
T 2q83_A          109 VYDWIEGRP  117 (346)
T ss_dssp             EEECCCCBC
T ss_pred             EEEeecCcc
Confidence            999999754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.59  E-value=0.00011  Score=59.40  Aligned_cols=78  Identities=5%  Similarity=-0.004  Sum_probs=47.5

Q ss_pred             eeee-CCccceEEEEEEEcc--cc-cchhhhhhccccCCC----CCcchhhhhhcccccCC------CCceEEe-cCC--
Q 036362            7 VELI-GRGKYGSFYKCEEDV--AE-NAYQTVLLKADIIPD----GVPISILTKISPLKEMD------YPLIFRK-END--   69 (246)
Q Consensus         7 ~~~l-g~G~~g~V~~~~~~~--~~-~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~------~~~i~~~-~~~--   69 (246)
                      .+.| +.|....+|+.....  .. ..+..+++|......    .....+.+|..+++.+.      -|.++.. .+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4677 889999999887540  00 003467788732221    12356788888887763      3444443 222  


Q ss_pred             -ceEEEEEeccCcccH
Q 036362           70 -KLVYQIFEYTGLLNL   84 (246)
Q Consensus        70 -~~~~lv~e~~~~~~L   84 (246)
                       +..++|||+++|.++
T Consensus       105 ~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             TSSCEEEEECCCCBCC
T ss_pred             cCCceEEEEecCCCCh
Confidence             456899999987554

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.45  E-value=0.00046  Score=57.14  Aligned_cols=37  Identities=11%  Similarity=0.354  Sum_probs=28.1

Q ss_pred             hhCceeeccCCCCCeEEecCCCeeeEEE---------eehhhHHHHHH
Q 036362          111 HSNRCLHGRLNPYQALINLSDYTVKIAR---------LISVGCIFAEM  149 (246)
Q Consensus       111 H~~~i~H~Dikp~Nil~~~~~~~~~~~D---------i~slG~i~~~l  149 (246)
                      +...++|||++|.|||++.++  ..++|         .+-+|.++..+
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~--~~lID~e~a~~G~p~~Dla~~l~~~  275 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS--TQVIDPEFSFYGPMGFDIGAYLGNL  275 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC--EEECCCTTCEEECHHHHHHHHHHHH
T ss_pred             CCCeEEecCCCCCcEEEeCCC--CEEEeCcccccCchHHHHHHHHHHH
Confidence            457899999999999998655  78888         35556655443

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.43  E-value=0.00014  Score=57.38  Aligned_cols=69  Identities=10%  Similarity=0.019  Sum_probs=42.9

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEecc-C
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEYT-G   80 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~~-~   80 (246)
                      -++.|+.|....+|++   .      .+++|+............+|..+++.+..    |-++.. +...-+++++|+ +
T Consensus        22 ~i~~l~gG~tN~~~~~---~------~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~-~~~~~~~v~e~i~~   91 (301)
T 3dxq_A           22 GPLERLGGLTNLVFRA---G------DLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV-DPATGVMVTRYIAG   91 (301)
T ss_dssp             SCEEEESCSSEEEEEE---T------TEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE-CTTTCCEEEECCTT
T ss_pred             ceeEcCCcccccccee---e------eEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE-ECCCCEEEEeecCC
Confidence            3678899999999988   2      37888843332223344678877776642    444433 333346899999 7


Q ss_pred             cccH
Q 036362           81 LLNL   84 (246)
Q Consensus        81 ~~~L   84 (246)
                      |.++
T Consensus        92 g~~l   95 (301)
T 3dxq_A           92 AQTM   95 (301)
T ss_dssp             CEEC
T ss_pred             CccC
Confidence            6555

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.04  E-value=0.00062  Score=54.02  Aligned_cols=71  Identities=14%  Similarity=0.194  Sum_probs=49.4

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC------CCceEEe-cCCceEEEEEecc
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD------YPLIFRK-ENDKLVYQIFEYT   79 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~-~~~~~~~lv~e~~   79 (246)
                      .+.|+.|....+|+....     +..+++|....  .....+..|...|+.+.      -|-++.. ...+..++|||++
T Consensus        41 ~~~l~gG~~n~~y~v~~~-----~~~~vlK~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDE-----VQTVFVKINER--SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEESS-----SCEEEEEEEEG--GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeCCccceeeeEEEEC-----CCeEEEEeCCc--ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            467899999999998752     44677888332  23456788888887763      3344433 4557899999999


Q ss_pred             CcccH
Q 036362           80 GLLNL   84 (246)
Q Consensus        80 ~~~~L   84 (246)
                      +|.++
T Consensus       114 ~G~~~  118 (312)
T 3jr1_A          114 NKSKN  118 (312)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            97643

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.91  E-value=0.0018  Score=51.74  Aligned_cols=74  Identities=11%  Similarity=0.032  Sum_probs=35.7

Q ss_pred             eeeCCccceE-EEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-----CCceEEecCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGS-FYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-----YPLIFRKENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~-V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-----~~~i~~~~~~~~~~lv~e~~~~   81 (246)
                      +.|+.|+... +|+.....    +..+++|.....  ....+..|+.+++.+.     -|.++....... +++||++++
T Consensus        24 ~~l~gg~s~~~~~r~~~~~----~~~~vlk~~~~~--~~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g-~ll~e~l~~   96 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPT----GAKAVLMDWSPE--EGGDTQPFVDLAQYLRNLDISAPEIYAEEHARG-LLLIEDLGD   96 (333)
T ss_dssp             CC--------CCEEEECTT----CCEEEEEECCTT--TTCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT-EEEECCCCS
T ss_pred             eECCCCCCCceEEEEEcCC----CCeEEEEECCCC--CCccccHHHHHHHHHHhCCCCCCceeeecCCCC-EEEEeeCCC
Confidence            4566665554 66665432    334666752211  1145666777776653     344444422222 689999987


Q ss_pred             ccHHHHH
Q 036362           82 LNLRKVI   88 (246)
Q Consensus        82 ~~L~~~~   88 (246)
                      .++.+.+
T Consensus        97 ~~l~~~l  103 (333)
T 3csv_A           97 ALFTEVI  103 (333)
T ss_dssp             CBHHHHH
T ss_pred             cchHHHh
Confidence            6665443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.75  E-value=0.0018  Score=52.77  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=41.8

Q ss_pred             eeeeCCccceEEEEEEEccc----ccchhhhhhccccCCCCCcchhhhhhcccccCC----CCceEEecCCceEEEEEec
Q 036362            7 VELIGRGKYGSFYKCEEDVA----ENAYQTVLLKADIIPDGVPISILTKISPLKEMD----YPLIFRKENDKLVYQIFEY   78 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~----~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~----~~~i~~~~~~~~~~lv~e~   78 (246)
                      ++.|..|-...+|++.....    ......+++|+............+|..+++.+.    .|-++-...+   .+||||
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---g~v~e~  131 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE---GRLEQY  131 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT---EEEEEC
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC---ccEEEE
Confidence            35677788889999876420    001357888884332233456678999888774    2444433332   289999


Q ss_pred             cCcccH
Q 036362           79 TGLLNL   84 (246)
Q Consensus        79 ~~~~~L   84 (246)
                      ++|.+|
T Consensus       132 i~G~~l  137 (379)
T 3feg_A          132 IPSRPL  137 (379)
T ss_dssp             CSEEEC
T ss_pred             ecCccC
Confidence            997554

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.75  E-value=0.0065  Score=48.10  Aligned_cols=71  Identities=8%  Similarity=0.014  Sum_probs=41.7

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC-----CceEEecC-------CceEEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY-----PLIFRKEN-------DKLVYQ   74 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~~~~-------~~~~~l   74 (246)
                      ++.|+.|....+|++....    + .+++|..... .....+..|..+++.+..     |.++...+       .+..++
T Consensus        27 ~~~i~~G~~n~~~~v~~~~----g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~  100 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTK----D-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAA  100 (322)
T ss_dssp             EEEECC---EEEEEEEESS----C-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             eeccCCCcccceEEEEeCC----c-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEE
Confidence            4567788889999987643    3 5778873321 234567778888777642     33322211       256789


Q ss_pred             EEeccCccc
Q 036362           75 IFEYTGLLN   83 (246)
Q Consensus        75 v~e~~~~~~   83 (246)
                      ++++++|..
T Consensus       101 l~~~l~G~~  109 (322)
T 2ppq_A          101 LISFLEGMW  109 (322)
T ss_dssp             EEECCCCBC
T ss_pred             EEEeCCCcC
Confidence            999999654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.53  E-value=0.001  Score=54.04  Aligned_cols=75  Identities=16%  Similarity=0.057  Sum_probs=40.0

Q ss_pred             eeeeCCccceEEEEEEEccccc-----chhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEe
Q 036362            7 VELIGRGKYGSFYKCEEDVAEN-----AYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFE   77 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e   77 (246)
                      .+.|+.|....+|++.......     ....+++|+.............|..+++.+..    |.++....   -++|++
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~---~~~v~e  114 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFN---GGRIEE  114 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEET---TEEEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEecC---CcEEEE
Confidence            4567888888999997643100     01467888833222212234678888887742    33332222   268999


Q ss_pred             ccCcccH
Q 036362           78 YTGLLNL   84 (246)
Q Consensus        78 ~~~~~~L   84 (246)
                      |++|.++
T Consensus       115 ~i~G~~l  121 (369)
T 3c5i_A          115 WLYGDPL  121 (369)
T ss_dssp             CCCSEEC
T ss_pred             EecCCcC
Confidence            9986543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.26  E-value=0.0029  Score=50.28  Aligned_cols=71  Identities=8%  Similarity=0.027  Sum_probs=43.6

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCce--EEe--c-------CCceEEEEE
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI--FRK--E-------NDKLVYQIF   76 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i--~~~--~-------~~~~~~lv~   76 (246)
                      ..++ |....||++....    ++.+++|...........+..|..+++.+...++  .+.  .       ..+..++++
T Consensus        32 ~~l~-g~~n~~y~v~~~~----g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~  106 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDED----RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF  106 (328)
T ss_dssp             EEEC-CSSSEEEEECCTT----CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred             Eeec-CcccceEEEEcCC----CCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence            4566 7788899876543    5568899843222244567778887777642222  222  1       134567899


Q ss_pred             eccCccc
Q 036362           77 EYTGLLN   83 (246)
Q Consensus        77 e~~~~~~   83 (246)
                      ++++|.+
T Consensus       107 ~~i~G~~  113 (328)
T 1zyl_A          107 PSVGGRQ  113 (328)
T ss_dssp             ECCCCEE
T ss_pred             EecCCCC
Confidence            9998644

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.79  E-value=0.0097  Score=49.37  Aligned_cols=74  Identities=16%  Similarity=0.198  Sum_probs=44.8

Q ss_pred             eeeeCCccceEEEEEEEcccc----cchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEec
Q 036362            7 VELIGRGKYGSFYKCEEDVAE----NAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEY   78 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~   78 (246)
                      ++.|+.|....||++......    ..+..+++|+.... .....+.+|..+++.+..    |-++....+   .+|++|
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---g~v~e~  153 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG---GRLEEY  153 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT---EEEECC
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC---CEEEEE
Confidence            457888989999999864210    01356888884221 222566689888887743    333322222   289999


Q ss_pred             cCcccH
Q 036362           79 TGLLNL   84 (246)
Q Consensus        79 ~~~~~L   84 (246)
                      ++|.+|
T Consensus       154 l~G~~l  159 (429)
T 1nw1_A          154 IPSRPL  159 (429)
T ss_dssp             CCEEEC
T ss_pred             eCCccc
Confidence            986443

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.73  E-value=0.031  Score=46.74  Aligned_cols=73  Identities=12%  Similarity=-0.043  Sum_probs=42.9

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEE-e--cCCceEEEEEeccCccc
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFR-K--ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~-~--~~~~~~~lv~e~~~~~~   83 (246)
                      ++.|+.|-...+|++.... .  +..+++|+..........-.+|..+++.+...++.+ +  ...+  .+|++|++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~-~--~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMS-K--QAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETT-T--TEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECC-C--CceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC--eEEEEeeCCcc
Confidence            4578889999999998753 2  356888884322222222258888888886444432 2  1122  25999998654


Q ss_pred             H
Q 036362           84 L   84 (246)
Q Consensus        84 L   84 (246)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.08  E-value=0.025  Score=45.26  Aligned_cols=25  Identities=12%  Similarity=0.183  Sum_probs=20.7

Q ss_pred             CceeeccCCCCCeEEecCCCeeeEEE
Q 036362          113 NRCLHGRLNPYQALINLSDYTVKIAR  138 (246)
Q Consensus       113 ~~i~H~Dikp~Nil~~~~~~~~~~~D  138 (246)
                      ..++|+|+.|.||+++.++ ...++|
T Consensus       206 ~~~~HgD~~~~N~l~~~~~-~~~~iD  230 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEE-SIYIID  230 (339)
T ss_dssp             CEEECSCCCGGGEEECGGG-CEEECC
T ss_pred             ceeEeCCCCcCCEEEeCCC-eEEEEE
Confidence            4699999999999998544 567778

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=88.07  E-value=5.6  Score=29.57  Aligned_cols=49  Identities=14%  Similarity=0.091  Sum_probs=28.2

Q ss_pred             cccHHHHHhhhcccccchHHH-----HHHHHHHHHh-hCceeeccCC-CCCeEEecCC
Q 036362           81 LLNLRKVIKNFLDIINNPKTA-----KILRVLSYYH-SNRCLHGRLN-PYQALINLSD  131 (246)
Q Consensus        81 ~~~L~~~~~~~~~~~~~~~~~-----qil~~L~~lH-~~~i~H~Dik-p~Nil~~~~~  131 (246)
                      ..||.++++.+. ..+++..+     |.+.+|.-+- .+. -|..|. |..|++..+|
T Consensus        32 ~vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG   87 (229)
T 2yle_A           32 ALSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDG   87 (229)
T ss_dssp             EEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTS
T ss_pred             cccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCC
Confidence            478999997754 34444433     6666654441 111 233333 6888888777

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=83.01  E-value=0.16  Score=42.50  Aligned_cols=55  Identities=13%  Similarity=0.122  Sum_probs=12.9

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhh------cccc---CCCCCcchhhhhhcccccCCCCceEEe
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLL------KADI---IPDGVPISILTKISPLKEMDYPLIFRK   66 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vai------K~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~   66 (246)
                      +.+.||   ||.||++.... .  ..+||+      |...   .+......+.+|..+++.++|||+++.
T Consensus       146 l~~~lG---fG~v~~g~~~~-~--~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~  209 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYK-K--HMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKI  209 (463)
T ss_dssp             STTTSS---BCCC------------CCBGGGC-----------------------------------CBC
T ss_pred             ccccCC---chhhhcccccc-c--CCchhhhhccCccccccccccccccccccccccccccccccccCCC
Confidence            345666   99999998865 3  457888      5411   122223467788888888899988765

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=80.51  E-value=0.7  Score=38.11  Aligned_cols=75  Identities=13%  Similarity=0.024  Sum_probs=45.7

Q ss_pred             eeeeCCccceEEEEEEEcccccc----hhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEec
Q 036362            7 VELIGRGKYGSFYKCEEDVAENA----YQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEY   78 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~   78 (246)
                      ++.+..|-...+|++........    +..+++|+..........-.+|..+++.+..    |-++....   -++|++|
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~---~~~I~ef  151 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP---EGRIEEF  151 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET---TEEEEEC
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC---CCEEEEE
Confidence            45678888899999987531110    3568888843333233344678888888753    33332222   2689999


Q ss_pred             cCcccH
Q 036362           79 TGLLNL   84 (246)
Q Consensus        79 ~~~~~L   84 (246)
                      ++|.+|
T Consensus       152 I~G~~l  157 (424)
T 3mes_A          152 IDGEPL  157 (424)
T ss_dssp             CCSEEC
T ss_pred             eCCccC
Confidence            997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	246
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-28
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-28
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-23
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-23
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-22
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-21
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-20
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-19
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-19
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-18
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	8e-14
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-13
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-07
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-04

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  105 bits (263), Expect = 6e-28
 Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 49/288 (17%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           MEKY  +E IG G YG  YK + +  E  +    ++ +   +G+P + + +IS LKE+ +
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILKELKH 59

Query: 61  PLI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-ILRVLSYYHSN 113
             I         +   ++        L  L  V +  L+ +        +L  ++Y H  
Sbjct: 60  SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119

Query: 114 RCLHGRLNPYQALINLSDYTVKI-----ARLI---------------------------- 140
           R LH  L P   LIN  +  +KI     AR                              
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178

Query: 141 -------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
                  SVGCIFAEMV   PL    SE+ + + IFR++G P+ +  P VT    +   +
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238

Query: 194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
              EP      L  L+ +G+DLL KML+++P +RIT   AL H Y+++
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 9e-28
 Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 49/290 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ME ++KVE IG G YG  YK    +         ++ D   +GVP + + +IS LKE+++
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

Query: 61  PLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHS 112
           P I +       +  +Y +FE+      + +  + L  I  P         L+ L++ HS
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120

Query: 113 NRCLHGRLNPYQALINLSDYTVK-----IARLI--------------------------- 140
           +R LH  L P   LIN ++  +K     +AR                             
Sbjct: 121 HRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179

Query: 141 --------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                   S+GCIFAEMV +  L    SE  +   IFR +G P E   PGVT+   +   
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           + +   +D + ++P L+  G  LL +ML  +P +RI+   AL H +++DV
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.4 bits (231), Expect = 4e-23
 Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 58/296 (19%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTV-LLKADIIPDGVPISILTKISPLKEM-- 58
           ++Y  V  IG G YG  +K  +      +  +  ++     +G+P+S + +++ L+ +  
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 59  ----------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----L 104
                     D   + R + +  +  +FE+        + K     +       +    L
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 126

Query: 105 RVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLI------------------------ 140
           R L + HS+R +H  L P   L+  S   +K+A                           
Sbjct: 127 RGLDFLHSHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 185

Query: 141 --------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF 186
                         SVGCIFAEM  ++PL   +S+  +   I  ++G P EE  P     
Sbjct: 186 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 245

Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                 +     + +   + D++  G DLL K L  NP +RI+   AL+H Y++D+
Sbjct: 246 PR--QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.7 bits (229), Expect = 6e-23
 Identities = 76/289 (26%), Positives = 113/289 (39%), Gaps = 49/289 (16%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M+KY K+E IG G YG+ +K +            ++ D   +GVP S L +I  LKE+ +
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60

Query: 61  PLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
             I R        +   LV++  +            +    I      ++L+ L + HS 
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120

Query: 114 RCLHGRLNPYQALINLSDYTVKIARLI--------------------------------- 140
             LH  L P   LIN  +  +K+A                                    
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179

Query: 141 -------SVGCIFAEMVIQE-PLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                  S GCIFAE+     PL        +   IFRL+G P+EE  P +T    +   
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
                   L  ++P L   G DLLQ +L+ NP +RI+  +AL H Y+ D
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (228), Expect = 2e-22
 Identities = 53/290 (18%), Positives = 100/290 (34%), Gaps = 49/290 (16%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
             YR ++ +G G YG+     +           L      +        ++  LK M + 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 62  LIFR----------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-ILRVLSYY 110
            +             ++    Y +  + G    + +    L           +L+ L Y 
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137

Query: 111 HSNRCLHGRLNPYQALINLSDYTVKI---------------------------------- 136
           H+   +H  L P    +N       +                                  
Sbjct: 138 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYT 197

Query: 137 --ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT--FFPFIYC 192
               + SVGCI AEM+  + L + +    +   I ++ G P  E +  + +     ++  
Sbjct: 198 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG 257

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
             E E KD A +L +  P  V+LL+KML ++ ++R+T  +AL H Y+  +
Sbjct: 258 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 307

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (215), Expect = 5e-21
 Identities = 58/289 (20%), Positives = 110/289 (38%), Gaps = 58/289 (20%)

Query: 6   KVELIGRGKYGSFYKCEEDVAENAYQTVLLK------ADIIPDGVPISILTKISPLKEMD 59
           K++ +G G++ + YK  +   +N  Q V +K           DG+  + L +I  L+E+ 
Sbjct: 2   KLDFLGEGQFATVYKARD---KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 58

Query: 60  YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYYHS 112
           +P I        +   +  +F++        +  N L +  +         L+ L Y H 
Sbjct: 59  HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 118

Query: 113 NRCLHGRLNPYQALINLSDYTVKIAR---------------------------------- 138
           +  LH  L P   L++  +  +K+A                                   
Sbjct: 119 HWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM 177

Query: 139 ------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                 + +VGCI AE++++ P     S+  +   IF  +G P+EE  P + +   ++  
Sbjct: 178 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT- 236

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
           ++      L  +        +DL+Q +   NP  RIT   AL   Y+ +
Sbjct: 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 285

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 2e-20
 Identities = 44/289 (15%), Positives = 95/289 (32%), Gaps = 51/289 (17%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKIS-----PLKEM 58
           Y   ++IG G +G  Y+ +   +        +  D       + I+ K+       L+  
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81

Query: 59  DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK------TAKILRVLSYYHS 112
            Y     K+++  +  + +Y      R            P         ++ R L+Y HS
Sbjct: 82  FYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140

Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLI-------------------------------- 140
               H  + P   L++     +K+                                    
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200

Query: 141 -------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
                  S GC+ AE+++ +P+    S   + + I +++G P+ E +  +   +      
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFP 260

Query: 194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
           +        +  P   P  + L  ++L   P  R+T  +A  H ++ ++
Sbjct: 261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 2e-19
 Identities = 56/303 (18%), Positives = 102/303 (33%), Gaps = 63/303 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           + KY K+  IG+G +G  +K              +  +   +G PI+ L +I  L+ + +
Sbjct: 9   VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 68

Query: 61  PLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILR 105
             +                    +Y +F++        +    +    +        +L 
Sbjct: 69  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 128

Query: 106 VLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------------------- 138
            L Y H N+ LH  +     LI   D  +K+A                            
Sbjct: 129 GLYYIHRNKILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY 187

Query: 139 -----------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
                            L   GCI AEM  + P+ +  +E  +   I +L G  + E  P
Sbjct: 188 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 247

Query: 182 GVTT---FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
            V     +        +       +     +P  +DL+ K+L ++P +RI  +DALNH +
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307

Query: 239 YRD 241
           +  
Sbjct: 308 FWS 310

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 3e-19
 Identities = 64/294 (21%), Positives = 94/294 (31%), Gaps = 55/294 (18%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVP-----ISILTKIS--- 53
            +Y  +  IG G YG      ++V +       +               I IL +     
Sbjct: 8   PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 67

Query: 54  PLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-TAKILRVLSYYHS 112
            +   D       E  K VY +    G    + +    L   +      +ILR L Y HS
Sbjct: 68  IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 127

Query: 113 NRCLHGRLNPYQALINLSDYTVKIAR---------------------------------- 138
              LH  L P   L+N +   +KI                                    
Sbjct: 128 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 186

Query: 139 ---------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF--F 187
                    + SVGCI AEM+   P+        +   I  ++G PS+E L  +      
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246

Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
            ++             L P+ +   +DLL KML  NP +RI V  AL H Y   
Sbjct: 247 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 4e-19
 Identities = 60/289 (20%), Positives = 92/289 (31%), Gaps = 49/289 (16%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E+Y+ +  +G G YGS     +           L               ++  LK M + 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77

Query: 62  LIFR----------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-TAKILRVLSYY 110
            +             E    VY +    G      V    L   +      +ILR L Y 
Sbjct: 78  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137

Query: 111 HSNRCLHGRLNPYQALINLSDYTVKI---------------------------------- 136
           HS   +H  L P    +N       +                                  
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197

Query: 137 --ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE 194
               + SVGCI AE++    L        +   I RL+G P  E L  +++     Y   
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257

Query: 195 ESE--PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
            ++    + A +     P  VDLL+KML ++  +RIT   AL H Y+  
Sbjct: 258 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 79.5 bits (195), Expect = 5e-18
 Identities = 51/298 (17%), Positives = 106/298 (35%), Gaps = 60/298 (20%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
            + Y+ V  +GRGKY   ++   ++  N  + V++K  I+       I  +I  L+ +  
Sbjct: 34  QDDYQLVRKLGRGKYSEVFEAI-NITNN--EKVVVK--ILKPVKKKKIKREIKILENLRG 88

Query: 61  -PLI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
            P I       +    +    +FE+    + +++ +   D        +IL+ L Y HS 
Sbjct: 89  GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 148

Query: 114 RCLHGRLNPYQALINLSDYTVKIAR----------------------------------- 138
             +H  + P+  +I+     +++                                     
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 208

Query: 139 ----LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF------- 186
               + S+GC+ A M+  +EP         + + I +++G                    
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268

Query: 187 -FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
                +  +  E    +     + P  +D L K+LR + + R+T  +A+ H Y+  VV
Sbjct: 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 7e-18
 Identities = 46/286 (16%), Positives = 94/286 (32%), Gaps = 75/286 (26%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           EKY   E +GRG++G  ++C E  ++   +T + K   +     + +  +IS L    + 
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSK---KTYMAKFVKVKGTDQVLVKKEISILNIARHR 61

Query: 62  LIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYHSN 113
            I       E+ + +  IFE+   L++ + I      +N  +       +   L + HS+
Sbjct: 62  NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121

Query: 114 RCLHGRLNPYQALI-NLSDYTVKI-----ARLI--------------------------- 140
              H  + P   +       T+KI     AR +                           
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS 181

Query: 141 ------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE 194
                 S+G +   ++         +  +   +I        EE    ++          
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS---------- 231

Query: 195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
                             +D + ++L    K R+T ++AL H + +
Sbjct: 232 ---------------IEAMDFVDRLLVKERKSRMTASEALQHPWLK 262

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 2e-17
 Identities = 55/304 (18%), Positives = 97/304 (31%), Gaps = 66/304 (21%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           +++Y+ ++ IG G  G      + V +       L               ++  +K +++
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75

Query: 61  PLIFR----------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYY 110
             I             E  + VY + E       + +         +    ++L  + + 
Sbjct: 76  KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 135

Query: 111 HSNRCLHGRLNPYQALIN-------------------------------------LSDYT 133
           HS   +H  L P   ++                                      L    
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195

Query: 134 VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
            +   + SVGCI  EMV  + L        +   +   +G P  E +  +    P +  Y
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL---QPTVRNY 252

Query: 194 EESEPKDLAILLPDLEP----------------AGVDLLQKMLRVNPKERITVNDALNHH 237
            E+ PK   +  P L P                   DLL KML ++P +RI+V+DAL H 
Sbjct: 253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312

Query: 238 YYRD 241
           Y   
Sbjct: 313 YINV 316

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 6e-16
 Identities = 50/302 (16%), Positives = 99/302 (32%), Gaps = 64/302 (21%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           + + K+  +G G  G  +K     +       L+  +I P  +   I+ ++  L E + P
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 64

Query: 62  LIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHS- 112
            I        +D  +    E+    +L +V+K     I      K+    ++ L+Y    
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK 123

Query: 113 NRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------------------- 140
           ++ +H  + P   L+N S   +K+     +  +                           
Sbjct: 124 HKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182

Query: 141 -----SVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE 194
                S+G    EM + + P+    ++  E +   ++ G+ +E      T   P      
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242

Query: 195 ESEPKDLAILLPD--------------LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
           +S P      L D                    D + K L  NP ER  +   + H + +
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302

Query: 241 DV 242
             
Sbjct: 303 RS 304

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 1e-14
 Identities = 48/288 (16%), Positives = 87/288 (30%), Gaps = 77/288 (26%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E +  V+ +G G YG        V E A    ++      D  P +I  +I   K +++ 
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHE 63

Query: 62  LIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYYHSNR 114
            + +    +    + Y   EY     L   I+  + +          +++  + Y H   
Sbjct: 64  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123

Query: 115 CLHGRLNPYQALINLSDYTVKI-----ARLI----------------------------- 140
             H  + P   L++     +KI     A +                              
Sbjct: 124 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182

Query: 141 --------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
                   S G +   M+  E   +  S+S +  S ++                      
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---------------------- 220

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
               E K        ++ A + LL K+L  NP  RIT+ D     +Y 
Sbjct: 221 ----EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 43/270 (15%), Positives = 96/270 (35%), Gaps = 29/270 (10%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           + Y   +++G G +      E+   +       +    + +G   S+  +I+ L ++ +P
Sbjct: 9   DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL-EGKEGSMENEIAVLHKIKHP 67

Query: 62  LIFR----KENDKLVYQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHSNR 114
            I       E+   +Y I +      L   I     + +   +    ++L  + Y H   
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 127

Query: 115 CLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE 174
            +H  L P   L    D   KI  +   G   ++M     +   A  +   ++   L  +
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKI-MISDFG--LSKMEDPGSVLSTACGTPGYVAPEVLAQK 184

Query: 175 PSEETLP----GVTTFF------PF--------IYCYEESEPKDLAILLPDLEPAGVDLL 216
           P  + +     GV  +       PF             ++E +  +    D+  +  D +
Sbjct: 185 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 244

Query: 217 QKMLRVNPKERITVNDALNHHYYRDVVSVP 246
           + ++  +P++R T   AL H +     ++ 
Sbjct: 245 RHLMEKDPEKRFTCEQALQHPWIAGDTALD 274

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 3e-14
 Identities = 44/259 (16%), Positives = 87/259 (33%), Gaps = 19/259 (7%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVP----------ISILTKI 52
           +Y+   L+G G +GS Y               ++ D I D             + +L K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 53  SPLKEMDYPLIFRKENDKLVYQIFEY-TGLLNLRKVIKN---FLDIINNPKTAKILRVLS 108
           S        L+   E       I E    + +L   I       + +      ++L  + 
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 109 YYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISI 168
           + H+   LH  +     LI+L+   +K+      G +  + V  +          E I  
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDF-GSGALLKDTVYTDFDGTRVYSPPEWIRY 183

Query: 169 FRLMGEPSEETLPGVTTFF----PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNP 224
            R  G  +     G+  +        + ++E   +        +      L++  L + P
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRP 243

Query: 225 KERITVNDALNHHYYRDVV 243
            +R T  +  NH + +DV+
Sbjct: 244 SDRPTFEEIQNHPWMQDVL 262

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 67.8 bits (165), Expect = 4e-14
 Identities = 41/283 (14%), Positives = 89/283 (31%), Gaps = 49/283 (17%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAY-------QTVLLKADIIPDGVPISILTKISP 54
           E Y   E++GRG      +C        Y             +      +  + L ++  
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 55  LKEMDYP-----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----IL 104
           L+++        L    E +   + +F+      L   +   + +  + K  +     +L
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL--SEKETRKIMRALL 120

Query: 105 RVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRE 164
            V+   H    +H  L P   L++  D  +K+         F+  +       +   +  
Sbjct: 121 EVICALHKLNIVHRDLKPENILLD-DDMNIKLT-----DFGFSCQLDPGEKLREVCGTPS 174

Query: 165 RISIFRLMGEPSEETLP----------GVTTF------FPF--------IYCYEESEPKD 200
            ++   +    ++              GV  +       PF        +        + 
Sbjct: 175 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 234

Query: 201 LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
            +    D      DL+ + L V P++R T  +AL H +++  V
Sbjct: 235 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 277

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 67.4 bits (164), Expect = 8e-14
 Identities = 36/289 (12%), Positives = 89/289 (30%), Gaps = 74/289 (25%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           ++ Y   E +G G +G  ++  E    N +    +      D    ++  +I  +  + +
Sbjct: 25  LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRH 82

Query: 61  PLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYHS 112
           P +       E+D  +  I+E+     L + + +  + ++  +  +    + + L + H 
Sbjct: 83  PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 142

Query: 113 NRCLHGRLNPYQALINL-SDYTVKI-----ARLI-------------------------- 140
           N  +H  L P   +        +K+        +                          
Sbjct: 143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 202

Query: 141 -------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
                  SVG +   ++         ++     ++        +    G++         
Sbjct: 203 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS--------- 253

Query: 194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
                             G D ++K+L  +P  R+T++ AL H +    
Sbjct: 254 ----------------EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 67.4 bits (164), Expect = 1e-13
 Identities = 45/265 (16%), Positives = 95/265 (35%), Gaps = 30/265 (11%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS---ILTKISPLKEM 58
           + Y  +E +G G +G  ++C E       +  + K   I    P+    +  +IS + ++
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATG---RVFVAK--FINTPYPLDKYTVKNEISIMNQL 83

Query: 59  DYPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYY 110
            +P +       E+   +  I E+     L   I      ++  +           L + 
Sbjct: 84  HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 143

Query: 111 HSNRCLHGRLNPYQALINLS-DYTVKI-----ARLISVGCIFAEMVIQEPLSEDASESRE 164
           H +  +H  + P   +       +VKI     A  ++   I          +      RE
Sbjct: 144 HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 203

Query: 165 RISIFRLM---GEPSEETLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLL 216
            +  +  M   G      L G++ F        +   +  + +        + P   D +
Sbjct: 204 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 263

Query: 217 QKMLRVNPKERITVNDALNHHYYRD 241
           + +L+  P++R+TV+DAL H + + 
Sbjct: 264 KNLLQKEPRKRLTVHDALEHPWLKG 288

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.6 bits (162), Expect = 2e-13
 Identities = 40/257 (15%), Positives = 91/257 (35%), Gaps = 22/257 (8%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTKISPLKEMDY 60
           + +  +  IG G +G+ Y   +           +  +    +     I+ ++  L+++ +
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 61  PLIFR----KENDKLVYQIFEY--TGLLNLRKVIKNFLDIINNPKTAK-ILRVLSYYHSN 113
           P   +       +   + + EY      +L +V K  L  +         L+ L+Y HS+
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134

Query: 114 RCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIF----AEMVIQEPLSEDASESRE 164
             +H  +     L++     VK+     A +++    F      M  +  L+ D  +   
Sbjct: 135 NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDG 193

Query: 165 RISIFRLMGEPSEETLPGVTTFF---PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLR 221
           ++ ++ L G    E        F        Y  ++ +  A+          + +   L+
Sbjct: 194 KVDVWSL-GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ 252

Query: 222 VNPKERITVNDALNHHY 238
             P++R T    L H +
Sbjct: 253 KIPQDRPTSEVLLKHRF 269

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 2e-13
 Identities = 55/284 (19%), Positives = 97/284 (34%), Gaps = 77/284 (27%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTKISPLKEMD 59
           +E +     +G+GK+G+ Y   E  ++      VL KA +   GV   +  ++     + 
Sbjct: 5   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 64

Query: 60  YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYH 111
           +P I R      +   VY I EY  L  + + ++      +  +TA     +   LSY H
Sbjct: 65  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH 123

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
           S R +H  + P   L+  S   +KIA                                  
Sbjct: 124 SKRVIHRDIKPENLLLG-SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 182

Query: 139 ----LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYE 194
               L S+G +  E ++ +P  E  +       I R+               FP      
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------------FP------ 224

Query: 195 ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
                        +     DL+ ++L+ NP +R  + + L H +
Sbjct: 225 -----------DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 257

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 7e-13
 Identities = 45/272 (16%), Positives = 93/272 (34%), Gaps = 38/272 (13%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTKISPLKEMD 59
           M  +  ++L+G+G +G      E      Y   +L K  II        +T+   L+   
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63

Query: 60  YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYHS 112
           +P +       +    +  + EY     L   +     F +       A+I+  L Y HS
Sbjct: 64  HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123

Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
              ++  +     +++  D  +KI        +  E +      +    + E ++   L 
Sbjct: 124 RDVVYRDIKLENLMLD-KDGHIKITDF----GLCKEGISDGATMKTFCGTPEYLAPEVLE 178

Query: 173 GEP----SEETLPGVTTFF------PFIYCYEESEPKDLAILL-------PDLEPAGVDL 215
                   +    GV  +       PF   Y +   +   ++L         L P    L
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHERLFELILMEEIRFPRTLSPEAKSL 235

Query: 216 LQKMLRVNPKERI-----TVNDALNHHYYRDV 242
           L  +L+ +PK+R+        + + H ++  +
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 8e-13
 Identities = 50/291 (17%), Positives = 90/291 (30%), Gaps = 76/291 (26%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDY 60
           +KY + E IG+G  G+ Y    DVA    Q V ++  ++        I+ +I  ++E   
Sbjct: 20  KKYTRFEKIGQGASGTVYTA-MDVATG--QEVAIRQMNLQQQPKKELIINEILVMRENKN 76

Query: 61  PLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK--TAKILRVLSYYHSNR 114
           P I            ++ + EY    +L  V+               + L+ L + HSN+
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136

Query: 115 CLHGRLNPYQALINLSDYTVK-----IARLI----------------------------- 140
            +H  +     L+   D +VK         I                             
Sbjct: 137 VIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195

Query: 141 -----SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE 195
                S+G +  EM+  EP   + +  R    I        E   P              
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI--ATNGTPELQNP-------------- 239

Query: 196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
                       L     D L + L ++ ++R +  + L H + +    + 
Sbjct: 240 ----------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 1e-12
 Identities = 45/265 (16%), Positives = 82/265 (30%), Gaps = 33/265 (12%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDY 60
           + +  +  +G G +G  YK +    +        K  D   +      + +I  L   D+
Sbjct: 12  DFWEIIGELGDGAFGKVYKAQN---KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68

Query: 61  PLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYHS 112
           P I +       +  ++ + E+     +  V+      +   +        L  L+Y H 
Sbjct: 69  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 128

Query: 113 NRCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           N+ +H  L     L    D  +K+     +   +      +  I  P            S
Sbjct: 129 NKIIHRDLKAGNILFT-LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 187

Query: 168 IFRLMGEPSEETLPGVTTF------FPF--------IYCYEESEPKDLAILLPDLEPAGV 213
             R     ++    G+T         P         +    +SEP  LA           
Sbjct: 188 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ-PSRWSSNFK 246

Query: 214 DLLQKMLRVNPKERITVNDALNHHY 238
           D L+K L  N   R T +  L H +
Sbjct: 247 DFLKKCLEKNVDARWTTSQLLQHPF 271

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 2e-12
 Identities = 38/279 (13%), Positives = 86/279 (30%), Gaps = 39/279 (13%)

Query: 1   MEKYRKV-ELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
           ++ Y+   +++G G  G   +      +   +   LK  ++ D        ++   +   
Sbjct: 10  IDDYKVTSQVLGLGINGKVLQIFNKRTQ---EKFALK--MLQDCPKARREVELH-WRASQ 63

Query: 60  YPLIFR--------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRV 106
            P I R            K +  + E      L   I++  D     + A      I   
Sbjct: 64  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 123

Query: 107 LSYYHSNRCLHGRLNPYQALIN------------------LSDYTVKIARLISVGCIFAE 148
           + Y HS    H  + P   L                     + +        +   +  E
Sbjct: 124 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 183

Query: 149 MVIQEPLSEDASESRERISIFRLM-GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPD 207
           ++  E   +        + ++ L+ G P   +  G+             + +       +
Sbjct: 184 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 243

Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
           +      L++ +L+  P +R+T+ + +NH +      VP
Sbjct: 244 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 282

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 4e-12
 Identities = 45/292 (15%), Positives = 83/292 (28%), Gaps = 86/292 (29%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E Y  +  IG G YG   K              L    + +     ++++++ L+E+ +P
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 62  LI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRV-------LS 108
            I           +  +Y + EY    +L  VI              +LRV       L 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 109 YYH-----SNRCLHGRLNPYQALINLSDYTVKI-----ARLI------------------ 140
             H      +  LH  L P    ++     VK+     AR++                  
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLD-GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 182

Query: 141 ----------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
                           S+GC+  E+    P     S+      +   + E     +P   
Sbjct: 183 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ----KELAGKIREGKFRRIP--- 235

Query: 185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
                                        +++ +ML +    R +V + L +
Sbjct: 236 ---------------------YRYSDELNEIITRMLNLKDYHRPSVEEILEN 266

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 6e-12
 Identities = 36/280 (12%), Positives = 96/280 (34%), Gaps = 42/280 (15%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK-----ADIIPDGVPISILTKISPL 55
           +E +  ++++G G YG  +   +    +  +   +K       +          T+   L
Sbjct: 23  IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82

Query: 56  KEMDYP-----LIFRKENDKLVYQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVL 107
           + +        L +  + +  ++ I +Y     L   +     F +        +I+  L
Sbjct: 83  EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 142

Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
            + H    ++  +     L++ + +      L   G     +  +   + D   + E ++
Sbjct: 143 EHLHKLGIIYRDIKLENILLDSNGH----VVLTDFGLSKEFVADETERAYDFCGTIEYMA 198

Query: 168 IFRLMGEPSEETLP------GVTTF------FPFIYCYEESEPKDLAI--------LLPD 207
              + G  S           GV  +       PF    E++   +++            +
Sbjct: 199 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 258

Query: 208 LEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDV 242
           +     DL+Q++L  +PK+R+       ++   H +++ +
Sbjct: 259 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 31/270 (11%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPIS---ILTKISPLKE 57
           + Y   E +G G++    KC E      Y    + K         +S   I  ++S LKE
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 58  MDYPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYY 110
           + +P +       EN   V  I E      L   +     +          +IL  + Y 
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL 129

Query: 111 HSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFR 170
           HS +  H  L P   ++   +      ++I  G   A  +      ++   + E ++   
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL--AHKIDFGNEFKNIFGTPEFVAPEI 187

Query: 171 LMGEPSEETL----PGVTTF------FPF--------IYCYEESEPKDLAILLPDLEPAG 212
           +  EP          GV T+       PF        +        +       +     
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247

Query: 213 VDLLQKMLRVNPKERITVNDALNHHYYRDV 242
            D ++++L  +PK+R+T+ D+L H + +  
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 3e-11
 Identities = 48/263 (18%), Positives = 84/263 (31%), Gaps = 29/263 (11%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI 63
            +    IGRG + + YK  +           L+   +          +   LK + +P I
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 64  FR--------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVL----SYYH 111
            R         +  K +  + E      L+  +K F  ++         R +     + H
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH 129

Query: 112 SN--RCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFAEMVIQ-------EPLSE 157
           +     +H  L      I     +VKI     A L      FA+ VI        E   E
Sbjct: 130 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYEE 187

Query: 158 DASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQ 217
              ES +  +    M E +    P              +     A       P   ++++
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 247

Query: 218 KMLRVNPKERITVNDALNHHYYR 240
             +R N  ER ++ D LNH +++
Sbjct: 248 GCIRQNKDERYSIKDLLNHAFFQ 270

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 4e-11
 Identities = 34/262 (12%), Positives = 83/262 (31%), Gaps = 40/262 (15%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
           M++ + ++ IG+G++G     +          V +K  I  D    + L + S + ++ +
Sbjct: 6   MKELKLLQTIGKGEFGDVMLGDYRG-----NKVAVKC-IKNDATAQAFLAEASVMTQLRH 59

Query: 61  PLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYY 110
             + +      E    +Y + EY    +L   +++    +            +   + Y 
Sbjct: 60  SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 119

Query: 111 HSNRCLHGRLNPYQALINLSDYTVKIA--------------RLISVGCIFAEMVIQEPLS 156
             N  +H  L     L++  D   K++                + V     E + ++  S
Sbjct: 120 EGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 178

Query: 157 EDASESRERISIFRLM--GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVD 214
             +      I ++ +   G      +P           Y+   P           PA  +
Sbjct: 179 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP-------DGCPPAVYE 231

Query: 215 LLQKMLRVNPKERITVNDALNH 236
           +++    ++   R +       
Sbjct: 232 VMKNCWHLDAAMRPSFLQLREQ 253

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 5e-11
 Identities = 43/264 (16%), Positives = 86/264 (32%), Gaps = 37/264 (14%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK--ADIIPDGVPISILTKISPLKEMD 59
           E+      IG G++G  ++      EN    V +K   +   D V    L +   +++ D
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 60  YPLIFR---KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYHS 112
           +P I +      +  V+ I E   L  LR  ++     ++          +   L+Y  S
Sbjct: 67  HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126

Query: 113 NRCLHGRLNPYQALINLSDYTVK-----IARLISVGCIFAEMVIQEPLSEDASESRER-- 165
            R +H  +     L++ S+  VK     ++R +     +     + P+   A ES     
Sbjct: 127 KRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185

Query: 166 -----------ISIFRLM--GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAG 212
                      + ++ ++  G    + +                 P       P+  P  
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-------PNCPPTL 238

Query: 213 VDLLQKMLRVNPKERITVNDALNH 236
             L+ K    +P  R    +    
Sbjct: 239 YSLMTKCWAYDPSRRPRFTELKAQ 262

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 1e-10
 Identities = 49/284 (17%), Positives = 93/284 (32%), Gaps = 79/284 (27%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTKISPLKEMDY 60
           E ++  +++G G + +     E      Y   +L K  II +     +  +   +  +D+
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 61  P----LIFRKENDKLVYQIFEY---TGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
           P    L F  ++D+ +Y    Y     LL   + I +F +      TA+I+  L Y H  
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127

Query: 114 RCLHGRLNPYQALINLSDYTVKI------------------------------------- 136
             +H  L P   L+N  D  ++I                                     
Sbjct: 128 GIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 186

Query: 137 ----ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
               + L ++GCI  ++V   P     +E      I +L  +  E               
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--------------- 231

Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
                            P   DL++K+L ++  +R+   +   +
Sbjct: 232 --------------KFFPKARDLVEKLLVLDATKRLGCEEMEGY 261

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (141), Expect = 1e-10
 Identities = 42/271 (15%), Positives = 84/271 (30%), Gaps = 31/271 (11%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTK---ISPLK 56
           M  +    +IGRG +G  Y C +      Y    L K  I         L +   +S + 
Sbjct: 3   MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62

Query: 57  EMDYPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSY 109
             D P I            +  I +     +L   +               A+I+  L +
Sbjct: 63  TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 122

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIF 169
            H+   ++  L P   L++     V+I+ L  + C F++      +      + E +   
Sbjct: 123 MHNRFVVYRDLKPANILLD-EHGHVRISDLG-LACDFSKKKPHASVGTHGYMAPEVLQKG 180

Query: 170 RLMGEPSEETLPGVTTF--FPFIYCYEESEPKDLAILL-----------PDLEPAGVDLL 216
                 ++    G   F        + + + KD   +                P    LL
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 240

Query: 217 QKMLRVNPKERITV-----NDALNHHYYRDV 242
           + +L+ +   R+        +     ++R +
Sbjct: 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.4 bits (137), Expect = 3e-10
 Identities = 50/326 (15%), Positives = 91/326 (27%), Gaps = 83/326 (25%)

Query: 3   KYRKVELIGRGKYGSFYKCE-----EDVA-----------ENAYQTV-LLKADIIPDGVP 45
           +Y  V  +G G + + +  +       VA           E A   + LL+     D   
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 46  ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK--- 102
              +     LK +D+    +  N   V  +FE  G   L  + K     I      +   
Sbjct: 74  EDSMGANHILKLLDH-FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 132

Query: 103 -ILRVLSYYHSNRCLHGR-LNPYQALINLSDYTVKIARL--------------------- 139
            +L  L Y H    +    + P   L+ + D    + ++                     
Sbjct: 133 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQT 192

Query: 140 --------------------ISVGCIFAEMVIQEPL------SEDASESRERISIFRLMG 173
                                S  C+  E++  + L           +      I  L+G
Sbjct: 193 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 252

Query: 174 EPSEETLPGVTTFFPFI-------------YCYEESEPKDLAILLPDLEPAGVDLLQKML 220
           E     L        F              +   E    +      D      D L  ML
Sbjct: 253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 312

Query: 221 RVNPKERITVNDALNHHYYRDVVSVP 246
           +++P++R      +NH + +D + + 
Sbjct: 313 QLDPRKRADAGGLVNHPWLKDTLGME 338

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.8 bits (131), Expect = 2e-09
 Identities = 42/265 (15%), Positives = 88/265 (33%), Gaps = 27/265 (10%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTKISPLKEMD 59
           ++++ +++ +G G +G     +   + N Y   +L K  ++        L +   L+ ++
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99

Query: 60  YPLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS 112
           +P + +         N  +V +      + +  + I  F +       A+I+    Y HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159

Query: 113 NRCLHGRLNPYQALINLSDY-TVKIARLISVGCIFAEMVIQEPLSEDASESRERI----S 167
              ++  L P   LI+   Y  V               +   P +        +      
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219

Query: 168 IFRLMGEPSEETLPGVTTFFP-----FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRV 222
            +  +G    E   G   FF              + +              DLL+ +L+V
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR----FPSHFSSDLKDLLRNLLQV 275

Query: 223 NPKERI-----TVNDALNHHYYRDV 242
           +  +R       VND  NH ++   
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWFATT 300

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 41/272 (15%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKADIIPDGVPISILTKISPLKEMD 59
           ++ ++ +  +G G +G  +          Y   VL K  ++          +   L  + 
Sbjct: 3   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62

Query: 60  YPLIFR----KENDKLVYQIFEY---TGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS 112
           +P I R     ++ + ++ I +Y     L +L +  + F + +     A++   L Y HS
Sbjct: 63  HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122

Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
              ++  L P   L++  +  +KI         F        ++     + + I+   + 
Sbjct: 123 KDIIYRDLKPENILLD-KNGHIKI-------TDFGFAKYVPDVTYTLCGTPDYIAPEVVS 174

Query: 173 GEPSEETL----PGVTTF------FPFIYCYEESEPKDLAILL-------PDLEPAGVDL 215
            +P  +++     G+  +       PF   Y+ +  K    +L       P       DL
Sbjct: 175 TKPYNKSIDWWSFGILIYEMLAGYTPF---YDSNTMKTYEKILNAELRFPPFFNEDVKDL 231

Query: 216 LQKMLRVNPKERI-----TVNDALNHHYYRDV 242
           L +++  +  +R+        D  NH ++++V
Sbjct: 232 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (128), Expect = 4e-09
 Identities = 37/288 (12%), Positives = 76/288 (26%), Gaps = 82/288 (28%)

Query: 2   EKYRKVELIGRGKYGSFYKCE--EDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
            +    + IG G +G+ YK +   DVA       +L           +   ++  L++  
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVA-----VKMLNVTAPTPQQLQAFKNEVGVLRKTR 62

Query: 60  YPLIFR---KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR----VLSYYHS 112
           +  I           +  + ++    +L   +          K   I R     + Y H+
Sbjct: 63  HVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122

Query: 113 NRCLHGRLNPYQALINLSDYTVKI-----ARLI--------------------------- 140
              +H  L      ++  D TVKI     A +                            
Sbjct: 123 KSIIHRDLKSNNIFLH-EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181

Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
                       + G +  E++  +    + +   + I +                    
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------------------ 223

Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
                      DL+ +  +   A   L+ + L+    ER      L  
Sbjct: 224 -----RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.1 bits (124), Expect = 1e-08
 Identities = 34/263 (12%), Positives = 65/263 (24%), Gaps = 41/263 (15%)

Query: 3   KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPL 62
           +YR    IG G +G  Y   +  A    + V +K + +    P  +  +    K M   +
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAG---EEVAIKLECVKTKHP-QLHIESKIYKMMQGGV 63

Query: 63  IFRK-----ENDKLVYQIFEY--TGLLNLRKVIKNFLDIINNPKTAK-ILRVLSYYHSNR 114
                            + E     L +L         +      A  ++  + Y HS  
Sbjct: 64  GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123

Query: 115 CLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM-- 172
            +H  + P   L+ L      +   I  G        +        E++      R    
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYI-IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182

Query: 173 --------------------------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
                                     G    + L   T    +    E+     + +L  
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242

Query: 207 DLEPAGVDLLQKMLRVNPKERIT 229
                    L     +   ++  
Sbjct: 243 GYPSEFATYLNFCRSLRFDDKPD 265

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.7 bits (123), Expect = 2e-08
 Identities = 36/264 (13%), Positives = 76/264 (28%), Gaps = 30/264 (11%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTV---LLKADIIPDGVPISILTKISPLKE 57
           +   +  ++IG G++G        +       V    LK+           L++ S + +
Sbjct: 25  ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQ 83

Query: 58  MDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR----VLSY 109
            D+P +            V  I E+    +L   ++         +   +LR     + Y
Sbjct: 84  FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 143

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFAEMVIQEPLSEDASESRE 164
                 +H  L     L+N S+   K+     +R +                     +  
Sbjct: 144 LADMNYVHRDLAARNILVN-SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 202

Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYC---YEESEPKDLAILL---------PDLEPAG 212
               +R     S+    G+  +    Y    Y +   +D+   +          D   A 
Sbjct: 203 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSAL 262

Query: 213 VDLLQKMLRVNPKERITVNDALNH 236
             L+    + +   R      +N 
Sbjct: 263 HQLMLDCWQKDRNHRPKFGQIVNT 286

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 2e-08
 Identities = 42/266 (15%), Positives = 88/266 (33%), Gaps = 29/266 (10%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEM 58
           +E +   +++G+G +G  +  E       +    LK D++   D V  +++ K       
Sbjct: 1   IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 59  DYPLIFR----KENDKLVYQIFEYTGLLNLRKVIKN---FLDIINNPKTAKILRVLSYYH 111
           ++P +       +  + ++ + EY    +L   I++   F         A+I+  L + H
Sbjct: 61  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 120

Query: 112 SNRCLHGRLNP---------YQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASES 162
           S   ++  L           +  + +       +                 P      + 
Sbjct: 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY 180

Query: 163 RERISIFRLMGEPSEETLPGVTTFFP-----FIYCYEESEPKDLAILLPDLEPAGVDLLQ 217
              +  +   G    E L G + F         +      P         LE    DLL 
Sbjct: 181 NHSVDWWSF-GVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF----YPRWLEKEAKDLLV 235

Query: 218 KMLRVNPKERITV-NDALNHHYYRDV 242
           K+    P++R+ V  D   H  +R++
Sbjct: 236 KLFVREPEKRLGVRGDIRQHPLFREI 261

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (119), Expect = 6e-08
 Identities = 32/283 (11%), Positives = 84/283 (29%), Gaps = 53/283 (18%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS----ILTKISPLKE 57
           ++ +  + +GRG +G   + +    +       +   ++ +G   S    +++++  L  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 58  MDYPLIFRK------ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK--------- 102
           + + L          +    +  I E+    NL   +++  +     K A          
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 103 ----------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL------------- 139
                     + + + +  S +C+H  L     L++     VKI                
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYV 191

Query: 140 ------ISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
                 + +  +  E +     +  +      + ++ +    S    P         +C 
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---SLGASPYPGVKIDEEFCR 248

Query: 194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
              E   +        P     +       P +R T ++ + H
Sbjct: 249 RLKEGTRMRA-PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 41/267 (15%), Positives = 82/267 (30%), Gaps = 36/267 (13%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-GVPISILTKISPLKEMDY 60
           ++Y   E++G G     +   +          +L+AD+  D    +    +      +++
Sbjct: 7   DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 66

Query: 61  PLIFR--------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVL 107
           P I               L Y + EY   + LR ++     +   PK A        + L
Sbjct: 67  PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQAL 124

Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
           ++ H N  +H  + P   +I  S           +    A+       +     + + +S
Sbjct: 125 NFSHQNGIIHRDVKPANIMI--SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 168 IFRLMGEPSE-------------ETLPGVTTF-----FPFIYCYEESEPKDLAILLPDLE 209
             +  G+  +             E L G   F         Y +   +P   +     L 
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 242

Query: 210 PAGVDLLQKMLRVNPKERITVNDALNH 236
                ++ K L  NP+ R      +  
Sbjct: 243 ADLDAVVLKALAKNPENRYQTAAEMRA 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 42/263 (15%), Positives = 94/263 (35%), Gaps = 32/263 (12%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E  + VE +G G++G  +        N +  V +K+       P + L + + +K++ + 
Sbjct: 13  ETLKLVERLGAGQFGEVWMGY----YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68

Query: 62  LIFR---KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYHSN 113
            + R       + +Y I EY    +L   +K    I             I   +++    
Sbjct: 69  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128

Query: 114 RCLHGRLNPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDA------SE 161
             +H  L     L++      ++D+   +ARLI      A    + P+   A        
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADF--GLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186

Query: 162 SRERISIFRLMGEPSEETLPGVTTFFPFIYCYE--ESEPKDLAILLPD-LEPAGVDLLQK 218
              +  ++   G    E +      +P +   E  ++  +   ++ PD        L++ 
Sbjct: 187 FTIKSDVWSF-GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL 245

Query: 219 MLRVNPKERITVNDALN--HHYY 239
             +  P++R T +   +    ++
Sbjct: 246 CWKERPEDRPTFDYLRSVLEDFF 268

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 4e-07
 Identities = 32/262 (12%), Positives = 76/262 (29%), Gaps = 38/262 (14%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI--SILTKISPLKEMD 59
            +   V+ IG G++G  +             V +K   I +G       + +   + ++ 
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNK----DKVAIK--TIREGAMSEEDFIEEAEVMMKLS 58

Query: 60  YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYH 111
           +P + +          +  +FE+     L   ++    +            +   ++Y  
Sbjct: 59  HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIA-----RLISVGCIFAEMVIQEPLSEDASESRERI 166
               +H  L     L+   +  +K++     R +      +    + P+   + E     
Sbjct: 119 EACVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF- 176

Query: 167 SIFRLMGEPSEETLPGVTTF------FPFIYCYEESE-----PKDLAILLPDLEPAGV-D 214
                    S+    GV  +               SE          +  P L    V  
Sbjct: 177 ---SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 233

Query: 215 LLQKMLRVNPKERITVNDALNH 236
           ++    +  P++R   +  L  
Sbjct: 234 IMNHCWKERPEDRPAFSRLLRQ 255

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 9e-07
 Identities = 35/256 (13%), Positives = 87/256 (33%), Gaps = 28/256 (10%)

Query: 8   ELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEMDYPLIFR 65
           E+IGRG +G  Y       +       +K+   I   G     LT+   +K+  +P +  
Sbjct: 33  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92

Query: 66  -----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHSNRCL 116
                  ++     +  Y    +LR  I+N                  + + +  S + +
Sbjct: 93  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 152

Query: 117 HGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPS 176
           H  L     +++   +TVK+A       ++ +          A    + +++  L  +  
Sbjct: 153 HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 211

Query: 177 E-------------ETLPGVTTFFPFIYCYEESEP--KDLAILLPDLEPAGV-DLLQKML 220
                         E +      +P +  ++ +    +   +L P+  P  + +++ K  
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271

Query: 221 RVNPKERITVNDALNH 236
               + R + ++ ++ 
Sbjct: 272 HPKAEMRPSFSELVSR 287

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 40/280 (14%), Positives = 89/280 (31%), Gaps = 56/280 (20%)

Query: 2   EKYRKVELIGRGKYGSFYKCEED--VAENAYQTVLLKA--DIIPDGVPISILTKISPLKE 57
           EK      +G+G +G  Y+      V +     V +K   +       I  L + S +KE
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 58  MDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT------------- 100
            +   + R        +    I E     +L+  +++    + N                
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 101 AKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS 160
            +I   ++Y ++N+ +H  L     ++   D+TVKI              +   + E   
Sbjct: 140 GEIADGMAYLNANKFVHRDLAARNCMVA-EDFTVKIGD----------FGMTRDIYETDY 188

Query: 161 ESRERISIFRLMGEPSEETLPGVTTFFPFIYC---------------YEESEPKDLAILL 205
             +    +  +     E    GV T +  ++                Y+    + +   +
Sbjct: 189 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 248

Query: 206 ---------PDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
                     +      +L++   + NPK R +  + ++ 
Sbjct: 249 MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 37/264 (14%), Positives = 87/264 (32%), Gaps = 39/264 (14%)

Query: 4   YRKVELIGRGKYGSFYKCEEDVAENAYQT-VLLKA--DIIPDGVPISILTKISPLKEMDY 60
           ++K++++G G +G+ YK          +  V +K   +         IL +   +  +D 
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 61  PLI------FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-ILRVLSYYHSN 113
           P +            +L+ Q+  +  LL+  +  K+ +           I + ++Y    
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130

Query: 114 RCLHGRLNPYQALINLSDYTVKI-----ARLI--------------SVGCIFAEMVIQEP 154
           R +H  L     L+  +   VKI     A+L+               +  +  E ++   
Sbjct: 131 RLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189

Query: 155 LSEDASESRERISIFRLM--GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAG 212
            +  +      ++++ LM  G    + +P               +P       P      
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP-------PICTIDV 242

Query: 213 VDLLQKMLRVNPKERITVNDALNH 236
             ++ K   ++   R    + +  
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIE 266

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (108), Expect = 1e-06
 Identities = 42/260 (16%), Positives = 82/260 (31%), Gaps = 36/260 (13%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI-SILTKISPLKEMDY 60
                   +G G+YG  Y+           TV +K  +  D + +   L + + +KE+ +
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYS---LTVAVKT-LKEDTMEVEEFLKEAAVMKEIKH 72

Query: 61  P----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYH 111
           P    L+     +   Y I E+    NL   ++       +          I   + Y  
Sbjct: 73  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132

Query: 112 SNRCLHGRLNPYQALINLSDYTVKIA--------------RLISVGCIFAEMVIQEPLSE 157
               +H  L     L+   ++ VK+A                            +     
Sbjct: 133 KKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191

Query: 158 DASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE--PKDLAILLPDLEPAGV-D 214
             S   +  +   L+     E      + +P I   +  E   KD  +  P+  P  V +
Sbjct: 192 KFSIKSDVWAFGVLL----WEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE 247

Query: 215 LLQKMLRVNPKERITVNDAL 234
           L++   + NP +R +  +  
Sbjct: 248 LMRACWQWNPSDRPSFAEIH 267

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 35/264 (13%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVL----LKADIIPDGVPISILTKISPLKE 57
               + ++IG G++G  YK     +    +  +    LKA        +  L +   + +
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR-VDFLGEAGIMGQ 65

Query: 58  MDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLS----Y 109
             +  I R        K +  I EY     L K ++      +  +   +LR ++    Y
Sbjct: 66  FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY 125

Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIA---------------RLISVGCIFAEMVIQEP 154
             +   +H  L     L+N S+   K++                  S G I       E 
Sbjct: 126 LANMNYVHRDLAARNILVN-SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184

Query: 155 LSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP---DLEPA 211
           +S    +      ++   G    E +      +  +  +E  +  +    LP   D   A
Sbjct: 185 ISY--RKFTSASDVWSF-GIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA 241

Query: 212 GVDLLQKMLRVNPKERITVNDALN 235
              L+ +  +     R    D ++
Sbjct: 242 IYQLMMQCWQQERARRPKFADIVS 265

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 37/280 (13%), Positives = 82/280 (29%), Gaps = 53/280 (18%)

Query: 1   MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEM 58
               +  ++IG G +G   K      +       +K   +            ++  L ++
Sbjct: 9   WNDIKFQDVIGEGNFGQVLKA-RIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 67

Query: 59  DY-----PLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----------- 102
            +      L+   E+   +Y   EY    NL   ++    +  +P  A            
Sbjct: 68  GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 127

Query: 103 --------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL--------------- 139
                   + R + Y    + +H  L     L+   +Y  KIA                 
Sbjct: 128 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSRGQEVYVKKTMG 186

Query: 140 -ISVGCIFAEMVIQEPLSEDASESRERISIFRLM--GEPSEETLPGVTTFFPFIYCYEES 196
            + V  +  E +     + ++      + ++ ++  G      +     +      Y   
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 246

Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           +P        + +    DL+++  R  P ER +    L  
Sbjct: 247 KP-------LNCDDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 33/267 (12%), Positives = 76/267 (28%), Gaps = 38/267 (14%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTV----LLKADIIPDGVPISILTKISPLKE 57
           +  R +E +G G +G   + E D       +V    L    +         + +++ +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 58  MDYPLIFR---KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKIL----RVLSYY 110
           +D+  + R         +  + E   L +L   ++           ++        + Y 
Sbjct: 68  LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127

Query: 111 HSNRCLHGRLNPYQALI-------------------NLSDYTVKIARLISVGCIFAEMVI 151
            S R +H  L     L+                   N   Y ++  R +       E + 
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187

Query: 152 QEPLSEDASESRERISIFRLM--GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLE 209
               S  +      ++++ +   G+     L G           E            D  
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP------RPEDCP 241

Query: 210 PAGVDLLQKMLRVNPKERITVNDALNH 236
               +++ +     P++R T     + 
Sbjct: 242 QDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 43/265 (16%), Positives = 90/265 (33%), Gaps = 36/265 (13%)

Query: 10  IGRGKYGSFYKCEEDVAENAYQTV---LLKADIIPDGVPISILTKISPLKEMDYPLI--- 63
           +G G +G+  K      +   +TV   +LK +     +   +L + + ++++D P I   
Sbjct: 15  LGSGNFGTVKKG-YYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 64  ---FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRL 120
                 E+  LV ++ E   L    +  ++  D        ++   + Y   +  +H  L
Sbjct: 74  IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133

Query: 121 NPYQALINLSDYTVKI-----ARLISVGCIF--AEMVIQEPLSEDASESRERISIFRLMG 173
                L+  + +  KI     ++ +     +  A+   + P+   A E            
Sbjct: 134 AARNVLLV-TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY----YKFS 188

Query: 174 EPSEETLPGVTTFFPFIYC---YEESEPKDLAILL---------PDLEPAGVDLLQKMLR 221
             S+    GV  +  F Y    Y   +  ++  +L                 DL+     
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWT 248

Query: 222 VNPKERITVNDALN--HHYYRDVVS 244
            + + R           +YY DVV+
Sbjct: 249 YDVENRPGFAAVELRLRNYYYDVVN 273

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 3e-06
 Identities = 27/290 (9%), Positives = 83/290 (28%), Gaps = 61/290 (21%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP----DGVPISILTKISPLKE 57
           E     +++G G +G               ++ +   ++          ++++++  + +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 58  MDY-----PLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK---------- 102
           +        L+        +Y IFEY    +L   +++  +  +  +             
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 103 ----------------ILRVLSYYHSNRCLHGRLNPYQALIN------------------ 128
                           + + + +     C+H  L     L+                   
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 216

Query: 129 LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM--GEPSEETLPGVTTF 186
            S+Y V+    + V  +  E + +   +  +      I ++ +   G      +P    F
Sbjct: 217 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 276

Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
           +  I    + +                 ++Q     + ++R +  +  + 
Sbjct: 277 YKLIQNGFKMDQP------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 31/263 (11%), Positives = 78/263 (29%), Gaps = 40/263 (15%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           +    ++ +G G++G     +     +    ++ +  +  D      + +   +  + + 
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED----EFIEEAKVMMNLSHE 59

Query: 62  LIFR----KENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAK-ILRVLSYYHSN 113
            + +        + ++ I EY     LLN  + +++        +  K +   + Y  S 
Sbjct: 60  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119

Query: 114 RCLHGRLNPYQALINLSDYTVKIARL------------------ISVGCIFAEMVIQEPL 155
           + LH  L     L+N     VK++                      V     E+++    
Sbjct: 120 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178

Query: 156 SEDASESRERISIFRLM--GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV 213
           S  +      + ++ +   G+   E      T            P   +           
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS-------EKVY 231

Query: 214 DLLQKMLRVNPKERITVNDALNH 236
            ++         ER T    L++
Sbjct: 232 TIMYSCWHEKADERPTFKILLSN 254

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 7e-06
 Identities = 41/262 (15%), Positives = 85/262 (32%), Gaps = 30/262 (11%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
           E  R    +G+G +G  +    +         L    + P+    + L +   +K++ + 
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHE 72

Query: 62  LI---FRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----ILRVLSYYHSN 113
            +   +   +++ +Y + EY    +L   +K                  I   ++Y    
Sbjct: 73  KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 132

Query: 114 RCLHGRLNPYQALINLSDYTVKI-----ARLISVGCIFAEMVIQEPLSEDASESR----- 163
             +H  L     L+   +   K+     ARLI      A    + P+   A E+      
Sbjct: 133 NYVHRDLRAANILVG-ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 191

Query: 164 -ERISIFRLMGEPSEETLPGVTTFFPFIY---CYEESEPKDLAILLPDLEPAGVDLLQKM 219
             +  ++   G    E        +P +      ++ E        P+   +  DL+ + 
Sbjct: 192 TIKSDVWSF-GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 250

Query: 220 LRVNPKERITVNDALN--HHYY 239
            R  P+ER T          Y+
Sbjct: 251 WRKEPEERPTFEYLQAFLEDYF 272

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 7e-06
 Identities = 47/284 (16%), Positives = 85/284 (29%), Gaps = 55/284 (19%)

Query: 2   EKYRKVELIGRGKYGSFYKCE----EDVAENAYQTV---LLKADIIPDGVP-----ISIL 49
           ++    + +G G +G     E    +    N    V   +LK+D     +      + ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 50  TKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK------- 102
             I   K +   L    ++  L Y I EY    NLR+ ++                    
Sbjct: 73  KMIGKHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 103 ------------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAE-- 148
                       + R + Y  S +C+H  L     L+   D  +KIA       I     
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 190

Query: 149 ----MVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC---YEESEPKDL 201
                  + P+   A E+       R+    S+    GV  +  F      Y     ++L
Sbjct: 191 YKKTTNGRLPVKWMAPEALFD----RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246

Query: 202 AILL---------PDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
             LL          +       +++      P +R T    +  
Sbjct: 247 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 2e-05
 Identities = 38/284 (13%), Positives = 90/284 (31%), Gaps = 58/284 (20%)

Query: 2   EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPIS----ILTKISPLKE 57
            +    + +G G +G   +        +   + +   ++     ++    +++++  L  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 58  MDY-----PLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK---------- 102
           +        L+           I EY    +L   ++   D     KT+           
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 103 -----------ILRVLSYYHSNRCLHGRLNPYQALI------------------NLSDYT 133
                      + + +++  S  C+H  L     L+                  N S+Y 
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202

Query: 134 VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM--GEPSEETLPGVTTFFPFIY 191
           VK    + V  +  E +     + ++      I ++ L   G      +P  + F+  I 
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262

Query: 192 CYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVNDAL 234
                  +   +L P+  PA + D+++     +P +R T    +
Sbjct: 263 -------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.0 bits (95), Expect = 6e-05
 Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 58/286 (20%)

Query: 2   EKYRKVELIGRGKYGSFYKCE--EDVAENAYQTVLLK--ADIIPDGVPISILTKISPLKE 57
                V  IG G +G  ++      +    +  V +K   +     +      + + + E
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 58  MDYPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----------- 102
            D P I +        K +  +FEY    +L + +++         +             
Sbjct: 73  FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 103 ----------------ILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA------RLI 140
                           +   ++Y    + +H  L     L+   +  VKIA       + 
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG-ENMVVKIADFGLSRNIY 191

Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC---YEESE 197
           S     A+     P+     ES             S+    GV  +  F Y    Y    
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFYNRY----TTESDVWAYGVVLWEIFSYGLQPYYGMA 247

Query: 198 PKDLAILL---------PDLEPAGVDLLQKMLRVNPKERITVNDAL 234
            +++   +          +      +L++      P +R +     
Sbjct: 248 HEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIH 293

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 35/258 (13%), Positives = 77/258 (29%), Gaps = 31/258 (12%)

Query: 10  IGRGKYGSFYKCEEDVAENAYQTVL--LKADIIPDGVPISILTKISPLKEMDYPLIFR-- 65
           +G G +GS  +    + +      +  LK           ++ +   + ++D P I R  
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 75

Query: 66  -KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK----ILRVLSYYHSNRCLHGRL 120
                + +  + E  G   L K +    + I     A+    +   + Y      +H  L
Sbjct: 76  GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135

Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP----S 176
                L+  + +  KI+    +                     +  +   +        S
Sbjct: 136 AARNVLLV-NRHYAKIS-DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 193

Query: 177 EETLPGVTTFFPFIYC---YEESEPKDLAILL---------PDLEPAGVDLLQKMLRVNP 224
           +    GVT +    Y    Y++ +  ++   +         P+  P    L+        
Sbjct: 194 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 253

Query: 225 KERIT---VNDALNHHYY 239
           ++R     V   +   YY
Sbjct: 254 EDRPDFLTVEQRMRACYY 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	246
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.87
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.33
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.0
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.83
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.35
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.06
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.88

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-55  Score=346.06  Aligned_cols=239  Identities=34%  Similarity=0.579  Sum_probs=199.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ||+|++++.||+|+||+||+|++.. +  ++.||+|+.   .........+.+|++++++++||||+++    .+.+..|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~   77 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKL-T--GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLY   77 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECC-C--CCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccccccee
Confidence            7999999999999999999999987 5  778999982   2223346788999999999999999998    6678999


Q ss_pred             EEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~------------  136 (246)
                      +||||++ +++.+++.......+     ..++.||+.||.|||++||+||||||+|||++.++ ..++            
T Consensus        78 iv~e~~~-~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~-~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          78 LVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVP  155 (298)
T ss_dssp             EEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-CEEECSTTHHHHHCCC
T ss_pred             EEEeecC-CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccC-cceeccCCcceeccCC
Confidence            9999999 555555543322333     33444999999999999999999999999999776 3344            


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||+||++++|++|+.||.+.+.......+....+.+....+........
T Consensus       156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  235 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD  235 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence                                        4499999999999999999999988889999999999998888887766666


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      .....+...........+.++++++||+++||..||++|||++|+|+||||++++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence            66666666666667777889999999999999999999999999999999999754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-53  Score=337.71  Aligned_cols=236  Identities=34%  Similarity=0.539  Sum_probs=198.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|+++++||+|+||+||+|+++.    ++.||+|+.   .........+.+|+.+++.++||||+++    ...+..+
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~   76 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNNY----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLV   76 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEETT----SCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeCC----CCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCcee
Confidence            7999999999999999999999864    678999982   2234446789999999999999999998    6778899


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      ++|+++.++.+..+.....   +.....++.||+.||+|||++||+||||||+|||++.++ ..+++|            
T Consensus        77 i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~-~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             EEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-CEEECCTTHHHHHCC---
T ss_pred             EEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCC-CEEecccccceecccCcc
Confidence            9999999776666655432   233334455999999999999999999999999999776 344444            


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  +||+||++++|++|+.||.+.++.++...+....+.+....+........+.
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence                                        9999999999999999999999889999999999999888887766665555


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                      ...............+.+++++.||+++||+.||++|||++|+|+||||++
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            555555555666677889999999999999999999999999999999985

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-53  Score=334.46  Aligned_cols=212  Identities=21%  Similarity=0.278  Sum_probs=168.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +++|++++.||+|+||+||+|+++. +  ++.||+|+.  .......+.+.+|+.++++++||||+++    .+.+..|+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~i   80 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRV-T--EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   80 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECC-C--CCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEE
Confidence            5799999999999999999999987 6  788999982  2223345678999999999999999998    66789999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ||||++||+|.+++.+..   +.....++.||++||.|||++||+||||||+|||++.++ ..+++|             
T Consensus        81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~-~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC-CEEECCCTTCEECEETTEE
T ss_pred             EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCC-CEEEccchhheeeccCCcc
Confidence            999999999999986532   233344455999999999999999999999999999776 344444             


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+||++++|++|++||...................              
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~--------------  225 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------------  225 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT--------------
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------------
Confidence                                         9999999999999999998765543333222210000              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                  ...++.+|+++.+|+.+||+.||++|||++|+|+||||++.
T Consensus       226 ------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         226 ------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             ------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ------------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence                        00124678999999999999999999999999999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-53  Score=336.31  Aligned_cols=234  Identities=24%  Similarity=0.403  Sum_probs=190.8

Q ss_pred             cceeeeCCccceEEEEEEEcccccchhhhhhcccc------CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            5 RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI------IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         5 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~------~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +.+++||+|+||+||+|++.. +  ++.||+|+..      ........+.+|+.+++.++||||+++    ...++.|+
T Consensus         1 E~l~~lG~G~fg~Vy~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~i   77 (299)
T d1ua2a_           1 EKLDFLGEGQFATVYKARDKN-T--NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   77 (299)
T ss_dssp             CEEEEEEEETTEEEEEEECSS-C--CSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             CcceEeccCcCeEEEEEEECC-C--CcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceee
Confidence            457899999999999999987 6  7889999821      112234678899999999999999998    66788999


Q ss_pred             EEeccCcccHHHHHhhh---cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           75 IFEYTGLLNLRKVIKNF---LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~---~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ||||+.++++..+....   ++.....++.||+.||+|||++||+||||||+|||++.++ ..+++|             
T Consensus        78 vmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~-~~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          78 VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG-VLKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             EEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEECCCGGGSTTTSCCCC
T ss_pred             hhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCC-ccccccCccccccCCCccc
Confidence            99999977776665432   2334445556999999999999999999999999999776 344444             


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                 +||+||++++|++|.+||.+.++.+++..+.+..|.|....++......... 
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~-  235 (299)
T d1ua2a_         157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV-  235 (299)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC-
T ss_pred             ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh-
Confidence                                       9999999999999999999999999999999999999988877665554332 


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .........+....+..++++.||+.+||+.||++||||+|+|+||||++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence            2223334445566778999999999999999999999999999999999865

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-53  Score=332.80  Aligned_cols=209  Identities=23%  Similarity=0.381  Sum_probs=174.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|++.+.||+|+||+||+|+++. +  ++.||+|+.    .........+.+|+.+++.++||||+++    .+.+..
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   81 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQ-S--KFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   81 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECC-C--CcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEE
Confidence            5899999999999999999999987 6  788999972    2334556788999999999999999998    677899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      |+||||+++|+|.+++.+..   +.....++.||+.||+|||++||+||||||+|||++.++ ..+++|           
T Consensus        82 ~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~-~~kl~DFG~a~~~~~~~  160 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSR  160 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEECCCCSCSCCCCCC
T ss_pred             EEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC-CEeecccceeeecCCCc
Confidence            99999999999999997643   223333455999999999999999999999999999776 445555           


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                +||+||++++|++|+.||.+.+.......+.+.  .+                 
T Consensus       161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~-----------------  221 (263)
T d2j4za1         161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--EF-----------------  221 (263)
T ss_dssp             CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CC-----------------
T ss_pred             ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CC-----------------
Confidence                                      999999999999999999887766665555441  00                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                ..++.+|+++++|+.+||+.||++|||++|+|+||||++-
T Consensus       222 ----------~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         222 ----------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             ----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             ----------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence                      0124578999999999999999999999999999999753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-53  Score=334.06  Aligned_cols=211  Identities=21%  Similarity=0.309  Sum_probs=174.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+ ........+.+.+|+.+++.++||||+++    .+.+..|+||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~-~--~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVA-T--GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTT-T--CCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECC-C--CCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            479999999999999999999887 5  78899998 23334456679999999999999999998    5678899999


Q ss_pred             eccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           77 EYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      ||++|++|.+++.+..  +.....++.||+.||.|||++||+||||||+|||++.++ ..+++|                
T Consensus        97 Ey~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~-~vkl~DFG~a~~~~~~~~~~~~  175 (293)
T d1yhwa1          97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRST  175 (293)
T ss_dssp             ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-CEEECCCTTCEECCSTTCCBCC
T ss_pred             EecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCC-cEeeccchhheeeccccccccc
Confidence            9999999999886532  333444555999999999999999999999999999776 455555                


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                             +||+||++++|++|..||.+.+.......+... +.+..                  
T Consensus       176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~-~~~~~------------------  236 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL------------------  236 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH-CSCCC------------------
T ss_pred             cccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC-CCCCC------------------
Confidence                                   999999999999999999988776666655542 11110                  


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                             ..++.+|+++++||.+||+.||.+|||++|+|+||||+..
T Consensus       237 -------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~  276 (293)
T d1yhwa1         237 -------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (293)
T ss_dssp             -------SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             -------CCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                   0114578999999999999999999999999999999754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-52  Score=330.75  Aligned_cols=211  Identities=20%  Similarity=0.267  Sum_probs=173.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +.|++++.||+|+||+||+|++.. +  +..||+|+. .......+.+.+|+.+++.++||||+++    .+.+..++||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKE-T--SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECC-C--CeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence            359999999999999999999987 6  788999983 3344556789999999999999999998    5678999999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE----------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI----------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~----------------  136 (246)
                      ||+++|+|.+++.+..    +.....++.||+.||.|||++||+||||||+|||++.++ ..++                
T Consensus        89 Ey~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~-~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          89 EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECHHHHHHH
T ss_pred             ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCC-CEEEEechhhhccCCCcccc
Confidence            9999999999976532    223334444999999999999999999999999999777 2333                


Q ss_pred             ----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          137 ----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       137 ----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                  +|+||+||++++|++|+.||.+.+..+.+..+...  .++.           
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~--~~~~-----------  234 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EPPT-----------  234 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS--CCCC-----------
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCC-----------
Confidence                                        45999999999999999999988777766666552  1110           


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                   ...+..+|+++++|+++||+.||.+|||++|+|+||||+..
T Consensus       235 -------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         235 -------------LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             -------------CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             -------------CCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence                         00114678999999999999999999999999999999854

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-52  Score=328.19  Aligned_cols=240  Identities=33%  Similarity=0.477  Sum_probs=192.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc---cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD---IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~---~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      |++|+++++||+|+||+||+|++.. +  ++.||+|+.   ........++.+|+.+++.++||||+++    ......+
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   77 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRE-T--HEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECC-C--CcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccccccee
Confidence            7999999999999999999999987 6  788999982   2233445788999999999999999998    6778999


Q ss_pred             EEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE--------------
Q 036362           74 QIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI--------------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~--------------  136 (246)
                      ++++++.+++|..++.....   .....++.|++.||+|||++||+||||||+|||++.++ ..++              
T Consensus        78 iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~-~~kl~DFG~a~~~~~~~~  156 (292)
T d1unla_          78 LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             EEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-CEEECCCTTCEECCSCCS
T ss_pred             EEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC-ceeeeecchhhcccCCCc
Confidence            99999998998888765432   22233444999999999999999999999999999766 3333              


Q ss_pred             --------------------------EEeehhhHHHHHHhhCCCC-CCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          137 --------------------------ARLISVGCIFAEMVIQEPL-SEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       137 --------------------------~Di~slG~i~~~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                +|+||+||++++|++|+.| |.+.+..+....+....+.+....++........
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (292)
T d1unla_         157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccc
Confidence                                      4599999999999999877 5566667778888888898888777665554433


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ................+.+++.+.||+++||+.||.+||||+|+|+||||+++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~  291 (292)
T d1unla_         237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSC
T ss_pred             cccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCCC
Confidence            2222222223344445678999999999999999999999999999999998753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-51  Score=327.67  Aligned_cols=239  Identities=28%  Similarity=0.456  Sum_probs=189.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccC---CCCceEEe---------
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEM---DYPLIFRK---------   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l---~~~~i~~~---------   66 (246)
                      ++|++++.||+|+||+||+|++..++  ++.||+|+   ..........+.+|+.+++.+   +||||+++         
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~--~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNG--GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTT--TEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCC--CEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            58999999999999999999997645  67789998   233344556778898888776   79999987         


Q ss_pred             cCCceEEEEEeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----
Q 036362           67 ENDKLVYQIFEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----  137 (246)
Q Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----  137 (246)
                      ......+++||+++++++........    +.....++.|++.||+|||++||+||||||+|||++.++ ..+++     
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~-~~kl~dfg~~  163 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLA  163 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC-CEEECSCCSC
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCC-Ceeecchhhh
Confidence            23468899999999666654433221    222233455999999999999999999999999999776 33443     


Q ss_pred             ---------------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          138 ---------------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       138 ---------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                       |+||+||++++|++|++||.+.+..+++..+....+.+....++...
T Consensus       164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  243 (305)
T d1blxa_         164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  243 (305)
T ss_dssp             CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred             hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccc
Confidence                                             49999999999999999999999999999999999999888777654


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCCC
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV  245 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  245 (246)
                      ......  ...............+++.++|||++||+.||++||||+|+|+||||+++..|
T Consensus       244 ~~~~~~--~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~  302 (305)
T d1blxa_         244 ALPRQA--FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  302 (305)
T ss_dssp             SSCGGG--SCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cchhhh--hccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhh
Confidence            443222  22223333445567899999999999999999999999999999999998654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=5.4e-52  Score=335.78  Aligned_cols=215  Identities=16%  Similarity=0.219  Sum_probs=175.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc-cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      |++|++++.||+|+||+||+|++.. +  ++.||+|+. .......+.+.+|+.+++.++||||+++    .+.+.+|+|
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~-~--g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv  101 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERA-T--GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI  101 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETT-T--TEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECC-C--CCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            5789999999999999999999987 6  788999983 2222335678899999999999999998    667899999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEEE------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIAR------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~D------------  138 (246)
                      |||++||+|.+++.+..    +.....++.||+.||.|||++||+||||||+|||++.++ ...+++|            
T Consensus       102 mE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~  181 (350)
T d1koaa2         102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS  181 (350)
T ss_dssp             ECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC
T ss_pred             EEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc
Confidence            99999999999985422    223344455999999999999999999999999997542 2455555            


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                +||+||++++|++|+.||.+.+..+.+..+......+..               
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~---------------  246 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD---------------  246 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCC---------------
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---------------
Confidence                                      999999999999999999988777777766653211110               


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                ..++.+|+++++||.+||..||++|||++|+|+||||++.+
T Consensus       247 ----------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         247 ----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             ----------GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             ----------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                      11246789999999999999999999999999999998764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-52  Score=333.35  Aligned_cols=213  Identities=19%  Similarity=0.234  Sum_probs=176.2

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      +++|++++.||+|+||+||+|.++. +  ++.||+|+..........+.+|+.+|+.++||||+++    .+.+.+|+||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~-~--~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvm   80 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETS-S--KKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECC-C--CcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            4799999999999999999999987 6  7889999854444445678899999999999999998    5678999999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC-CeeeEEE-------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD-YTVKIAR-------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~-~~~~~~D-------------  138 (246)
                      ||++|++|.+++....    +..+..++.||+.||.|||++||+||||||+|||++.++ ...+++|             
T Consensus        81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence            9999999999997532    223334455999999999999999999999999998654 2344444             


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               +||+||++|+|++|..||.+.+....+..+....-.+                  
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~------------------  222 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF------------------  222 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC------------------
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC------------------
Confidence                                     9999999999999999999888777777666521110                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD  241 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~  241 (246)
                             ....++.+|+++++||.+||..||.+|||++|+++||||++
T Consensus       223 -------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         223 -------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             -------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             -------ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence                   01123568999999999999999999999999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=326.51  Aligned_cols=215  Identities=20%  Similarity=0.212  Sum_probs=173.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-------CCCCCcchhhhhhcccccCCCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-------IPDGVPISILTKISPLKEMDYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-------~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~   70 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+..       ......+.+.+|+.+++.++||||+++    .+.+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~-~--~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKS-T--GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   86 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCEEEeEEEecCCCeEEEEEEECC-C--CCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            469999999999999999999987 5  7889999721       111124568899999999999999998    6788


Q ss_pred             eEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC---eeeEEE------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY---TVKIAR------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~---~~~~~D------  138 (246)
                      ..|+||||++||+|.+++.+..   +.....++.|++.||+|||++||+||||||+|||++.++.   ..+++|      
T Consensus        87 ~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          87 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            9999999999999999997642   2233334459999999999999999999999999987662   245555      


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||++++|++|..||.+.+..+....+.......           
T Consensus       167 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~-----------  235 (293)
T d1jksa_         167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-----------  235 (293)
T ss_dssp             CTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC-----------
T ss_pred             cCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC-----------
Confidence                                            9999999999999999999887776666555421100           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                                    ....++.+|+++++||++||+.||++|||++|+|+||||++.+.
T Consensus       236 --------------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         236 --------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             --------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             --------------CchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence                          01123578999999999999999999999999999999997543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2e-51  Score=332.72  Aligned_cols=213  Identities=18%  Similarity=0.213  Sum_probs=174.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~   76 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+.. ........+.+|+.+++.++||||+++    .+.+.+|+||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~-~--~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKA-T--GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            579999999999999999999987 6  8889999822 222234577899999999999999998    6778999999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC-CCeeeEEE-------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS-DYTVKIAR-------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~-~~~~~~~D-------------  138 (246)
                      ||++|++|.+++....    +.....++.||+.||.|||++||+||||||+|||++.. ....+++|             
T Consensus       106 E~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             EcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence            9999999998875432    33334445599999999999999999999999999843 22455555             


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               +||+||++++|++|..||.+.+....+..+......++.                
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~----------------  249 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE----------------  249 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS----------------
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc----------------
Confidence                                     999999999999999999988887777766653211111                


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                               ..+..+|+++++||.+||+.||.+|||+.|+|+||||++.
T Consensus       250 ---------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         250 ---------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             ---------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ---------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                     1125789999999999999999999999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-52  Score=326.03  Aligned_cols=209  Identities=22%  Similarity=0.345  Sum_probs=173.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+.    .........+.+|++++++++||||+++    .+.+..|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~   84 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELA-T--SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY   84 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEE
Confidence            579999999999999999999987 5  788999982    1234456789999999999999999998    6778999


Q ss_pred             EEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           74 QIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      +||||++||+|.+++....   +.....++.|++.||.|||++||+||||||+|||++.++ ..+++|            
T Consensus        85 ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~-~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          85 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-CEEECCCTTCEECC----
T ss_pred             EEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc-eEEecccccceecccCCc
Confidence            9999999999999987642   233334445999999999999999999999999999776 344444            


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+||++++|++|..||.+.+.......+...  .+              
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--~~--------------  227 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--EY--------------  227 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT--CC--------------
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC--CC--------------
Confidence                                         999999999999999999988776666655541  10              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHH------HhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVND------ALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e------~l~h~~~~~~~  243 (246)
                                   ..+..+++++++||++||+.||.+|||++|      +++||||++++
T Consensus       228 -------------~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         228 -------------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             -------------CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             -------------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence                         012467899999999999999999999998      58999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-51  Score=325.73  Aligned_cols=213  Identities=19%  Similarity=0.242  Sum_probs=168.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      +.|++.+.||+|+||+||+|++.. +  ++.||+|+.  .........+.+|+.+++.++||||+++    .+.+..|+|
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKR-T--QKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETT-T--CCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECC-C--CCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            469999999999999999999987 6  788999982  2223345678899999999999999998    677899999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC--CCeeeEEE------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~--~~~~~~~D------------  138 (246)
                      |||++|+||.+++....   +.....++.||+.||.|||++||+||||||+|||+...  +...+++|            
T Consensus        86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~  165 (307)
T d1a06a_          86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV  165 (307)
T ss_dssp             ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             EeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe
Confidence            99999999999997532   23334445599999999999999999999999999642  22445555            


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                +||+||++++|++|.+||.+.........+....-.+.                
T Consensus       166 ~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------  229 (307)
T d1a06a_         166 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD----------------  229 (307)
T ss_dssp             -------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC----------------
T ss_pred             eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC----------------
Confidence                                      99999999999999999998777666655554211100                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                               ...++.+|+++++|+.+||+.||++|||++|+++||||++.
T Consensus       230 ---------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         230 ---------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             ---------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             ---------CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence                     01125789999999999999999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-52  Score=333.13  Aligned_cols=238  Identities=18%  Similarity=0.221  Sum_probs=169.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|+++++||+|+||+||+|++.. +  ++.||+|+..  ........+.+|+.+++.++||||+++    .+.++.|+|
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKP-S--GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETT-T--TEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEecCCCeEEEEEEECC-C--CcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            689999999999999999999987 6  8899999832  233445678999999999999999998    677889999


Q ss_pred             EeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           76 FEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      |||++|++|.+++.+..   +.....++.||+.||.|||+ +||+||||||+|||++.++ ..+++|             
T Consensus        83 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~-~vkl~DFGla~~~~~~~~~  161 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN  161 (322)
T ss_dssp             EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-CEEECCCCCCHHHHHHTC-
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCC-CEEEeeCCCccccCCCccc
Confidence            99999999999997642   22333445599999999997 4999999999999999776 556666             


Q ss_pred             ------------------------eehhhHHHHHHhhCCCCCCCCcchH-HHHHHHHhhCCCCcCc----CCCCCCcccc
Q 036362          139 ------------------------LISVGCIFAEMVIQEPLSEDASESR-ERISIFRLMGEPSEET----LPGVTTFFPF  189 (246)
Q Consensus       139 ------------------------i~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~  189 (246)
                                              +||+||+++||++|+.||.+.+... +........+.+....    ..........
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG  241 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------------
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccc
Confidence                                    9999999999999999998765432 2222222222221110    0000000000


Q ss_pred             ccccCCCCcch-h--------hhh-CCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKD-L--------AIL-LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~-~--------~~~-~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ....+...... .        ... ....|++++||+.+||..||.+||||+|+|+||||++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             ----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence            00000000000 0        000 123688999999999999999999999999999998643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=323.17  Aligned_cols=206  Identities=19%  Similarity=0.255  Sum_probs=160.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe------cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK------ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~------~~~~~~   72 (246)
                      ++|++++.||+|+||+||+|+++. +  ++.||+|.....   ....+.+.+|+++++.++||||+++      ...+.+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   80 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKS-D--GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   80 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECC-C--CCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE
Confidence            789999999999999999999987 6  788999983222   2224568899999999999999988      235678


Q ss_pred             EEEEeccCcccHHHHHhhhc--cccc-----chHHHHHHHHHHHHhhCc-----eeeccCCCCCeEEecCCCeeeEEE--
Q 036362           73 YQIFEYTGLLNLRKVIKNFL--DIIN-----NPKTAKILRVLSYYHSNR-----CLHGRLNPYQALINLSDYTVKIAR--  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~--~~~~-----~~~~~qil~~L~~lH~~~-----i~H~Dikp~Nil~~~~~~~~~~~D--  138 (246)
                      |+||||+++|+|.+++.+..  ...+     ..++.||+.||.|||++|     |+||||||+|||++.++ ..+++|  
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~-~vkl~DFG  159 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFG  159 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTS-CEEECCHH
T ss_pred             EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCC-cEEEeecc
Confidence            99999999999999986532  2223     334449999999999976     99999999999999776 455555  


Q ss_pred             -------------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCC
Q 036362          139 -------------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP  181 (246)
Q Consensus       139 -------------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (246)
                                                           +||+||++++|++|..||.+.+..+....+...  ...     
T Consensus       160 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~--~~~-----  232 (269)
T d2java1         160 LARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFR-----  232 (269)
T ss_dssp             HHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCC-----
T ss_pred             ceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCC-----
Confidence                                                 999999999999999999987776655555441  100     


Q ss_pred             CCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          182 GVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                           ..+..+|+++.+|+++||+.||.+|||++|+++|||+
T Consensus       233 ---------------------~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         233 ---------------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             ---------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ---------------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                                 0124678999999999999999999999999999996

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-51  Score=330.26  Aligned_cols=209  Identities=18%  Similarity=0.269  Sum_probs=176.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|++++.||+|+||+||+|+++. +  ++.||+|+.    .........+.+|+.+|+.++||||+++    .+.+.+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~-~--~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   80 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKA-T--GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECC-C--CCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccc
Confidence            6899999999999999999999987 6  889999982    1234456788999999999999999998    677899


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      |+||||++||+|.+++.+..   +..+..+++||+.||.|||++||+||||||+|||++.+| ..+++|           
T Consensus        81 ~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g-~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCSCCTT
T ss_pred             ccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCC-CEEEeecccccccccCC
Confidence            99999999999999997643   333444555999999999999999999999999999877 455555           


Q ss_pred             ----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                  +||+||++|+|++|.+||.+.+.......+...  .+               
T Consensus       160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~--~~---------------  222 (337)
T d1o6la_         160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EI---------------  222 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CC---------------
T ss_pred             cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC--CC---------------
Confidence                                        999999999999999999988876666555541  11               


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDV  242 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~  242 (246)
                                  ..++.+|+++++||++||+.||.+|++     ++|+++||||+++
T Consensus       223 ------------~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         223 ------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             ------------CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence                        012568999999999999999999994     9999999999886

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1e-50  Score=318.60  Aligned_cols=212  Identities=19%  Similarity=0.285  Sum_probs=172.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCC----------CcchhhhhhcccccCC-CCceEEe----
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG----------VPISILTKISPLKEMD-YPLIFRK----   66 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~~E~~~l~~l~-~~~i~~~----   66 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+......          ....+.+|+.++++++ ||||+++    
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~-~--~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~   79 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKP-T--CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   79 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             ccCEEceEEecCcCeEEEEEEECC-C--CCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec
Confidence            789999999999999999999977 6  88999998222111          1235889999999997 9999988    


Q ss_pred             cCCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-------
Q 036362           67 ENDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-------  136 (246)
Q Consensus        67 ~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-------  136 (246)
                      .+++.+|+||||++++||.+++....   +.....++.||+.||+|||++||+||||||+|||++.++ ..++       
T Consensus        80 ~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-~~kl~DFG~a~  158 (277)
T d1phka_          80 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSC  158 (277)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-CEEECCCTTCE
T ss_pred             ccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC-CeEEccchhee
Confidence            77889999999999999999997642   223333444999999999999999999999999999776 3333       


Q ss_pred             -------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCc
Q 036362          137 -------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET  179 (246)
Q Consensus       137 -------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (246)
                                                           +|+||+||++++|++|+.||.+.+.......+...--.+.   
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~---  235 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG---  235 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCC---
Confidence                                                 4599999999999999999998887766666655210000   


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                            .....++|+++++|+.+||+.||++|||++|+|+||||++.
T Consensus       236 ----------------------~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         236 ----------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             ----------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             ----------------------CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence                                  00124689999999999999999999999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-51  Score=318.96  Aligned_cols=209  Identities=20%  Similarity=0.244  Sum_probs=164.0

Q ss_pred             Cc-cceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe--------cCCc
Q 036362            3 KY-RKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK--------ENDK   70 (246)
Q Consensus         3 ~y-~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~--------~~~~   70 (246)
                      +| ++.++||+|+||+||+|++.. +  +..||+|...   ......+.+.+|+++++.++||||+++        ....
T Consensus         9 ry~~~~~~iG~G~fg~Vy~~~~~~-~--~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_           9 RFLKFDIEIGRGSFKTVYKGLDTE-T--TVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETT-T--CCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             CEEEeeeEEecCcCcEEEEEEECC-C--CeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCC
Confidence            45 677899999999999999987 5  7788888722   122234578899999999999999998        2256


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCc--eeeccCCCCCeEEecCCCeeeEEE-------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNR--CLHGRLNPYQALINLSDYTVKIAR-------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~--i~H~Dikp~Nil~~~~~~~~~~~D-------  138 (246)
                      .+|+||||+++++|.+++.+...   .....+..||+.||.|||++|  |+||||||+|||++.+....+++|       
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~  165 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  165 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence            78999999999999999976432   222334459999999999999  999999999999975443556666       


Q ss_pred             -----------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 -----------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                   +||+||++++|++|+.||............... +.++.            
T Consensus       166 ~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~-~~~~~------------  232 (270)
T d1t4ha_         166 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-GVKPA------------  232 (270)
T ss_dssp             CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCG------------
T ss_pred             cCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHc-CCCCc------------
Confidence                                         999999999999999999876554443332221 11100            


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCc
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR  240 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~  240 (246)
                                   ......++++++|+.+||+.||++|||++|+|+||||+
T Consensus       233 -------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         233 -------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -------------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                         11245789999999999999999999999999999996

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.4e-51  Score=325.12  Aligned_cols=210  Identities=18%  Similarity=0.278  Sum_probs=176.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|++++.||+|+||+||+|+++. +  ++.||+|+.    .........+.+|+.+++.++||||+++    .+.+..
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~-~--g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   79 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRH-N--GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   79 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECC-C--CCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCee
Confidence            6899999999999999999999987 6  788999982    2334556788999999999999999998    677899


Q ss_pred             EEEEeccCcccHHHHHhhhccc---ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFLDI---INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      |+||||++|++|..++......   ....+..||+.||.|||++||+||||||+|||++.++ ..+++|           
T Consensus        80 ~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g-~vkL~DFG~a~~~~~~~  158 (316)
T d1fota_          80 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG-HIKITDFGFAKYVPDVT  158 (316)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS-CEEECCCSSCEECSSCB
T ss_pred             eeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCC-CEEEecCccceEecccc
Confidence            9999999999999998764322   2233445999999999999999999999999999776 455555           


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               +||+||++++|++|+.||.+.+.......+...  ..                  
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~------------------  218 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--EL------------------  218 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CC------------------
T ss_pred             ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC--CC------------------
Confidence                                     999999999999999999988777666666552  10                  


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                               ..++.+++++++++.+||..||.+|+     |++|+++||||++++
T Consensus       219 ---------~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         219 ---------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             ---------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             ---------CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCC
Confidence                     01246789999999999999999996     999999999999873

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-51  Score=331.46  Aligned_cols=232  Identities=18%  Similarity=0.375  Sum_probs=179.0

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----------cCCceE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----------ENDKLV   72 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----------~~~~~~   72 (246)
                      +|+.+++||+|+||+||+|++.. +  ++.||+|+....   .....+|+.+++.++||||+++          .+..+.
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~-~--~~~vAiK~i~~~---~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCD-S--GELVAIKKVLQD---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEECC---SSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECC-C--CCEEEEEEECcc---chHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            68999999999999999999987 6  889999983222   2345689999999999999987          234568


Q ss_pred             EEEEeccCcccHHHHHhh--hccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------
Q 036362           73 YQIFEYTGLLNLRKVIKN--FLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~--~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------  138 (246)
                      ++||||++++ +.+.+..  .....+     ..++.||+.||+|||++||+||||||+|||++.++...+++|       
T Consensus        95 ~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          95 NLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            9999999954 4444322  112223     334559999999999999999999999999998876677777       


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||+++||++|.+||...+..+++..+.+..|.+..+.+......
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~  253 (350)
T d1q5ka_         174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  253 (350)
T ss_dssp             CTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred             cCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccc
Confidence                                            999999999999999999999999999999999998876644322111


Q ss_pred             cccccccCCCCcch-hhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          187 FPFIYCYEESEPKD-LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       187 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      ... ..++...... .....+..++++.+||++||..||++||||.|+|+||||+++
T Consensus       254 ~~~-~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         254 YTE-FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             --C-CCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hhh-ccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            100 0111111111 122235689999999999999999999999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-51  Score=330.91  Aligned_cols=237  Identities=24%  Similarity=0.383  Sum_probs=184.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----------cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----------EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----------~~   68 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+....   ......+.+|+.+|+.++||||+++          ..
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGR-T--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETT-T--CCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccc
Confidence            589999999999999999999987 6  888999983322   2224578899999999999999997          12


Q ss_pred             CceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee-----------
Q 036362           69 DKLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK-----------  135 (246)
Q Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~-----------  135 (246)
                      ...+|+||||++ .+|..+++..  ++.....++.||+.||.|||++||+||||||+|||++.++ ..+           
T Consensus        95 ~~~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~-~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          95 FTDFYLVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC-ELKILDFGLARQAD  172 (346)
T ss_dssp             CCCCEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEECC
T ss_pred             cceEEEEEeccc-ccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccc-ccccccccceeccC
Confidence            346899999996 8898887642  2333444455999999999999999999999999999776 233           


Q ss_pred             --------------------------EEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--
Q 036362          136 --------------------------IARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--  187 (246)
Q Consensus       136 --------------------------~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  187 (246)
                                                .+|+||+||++++|++|++||.+.+....+..+....+.++.+.+.......  
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence                                      3459999999999999999999999999999999998888776554433321  


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      .+....+......+....+..++++.|||.+||..||++||||+|+|+||||+++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            12223344444555666678999999999999999999999999999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.2e-50  Score=326.55  Aligned_cols=238  Identities=20%  Similarity=0.308  Sum_probs=182.7

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC-CCceEEe------cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD-YPLIFRK------ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~------~~~~~~~l   74 (246)
                      ++|+++++||+|+||+||+|++.. +  ++.||+|+.  .......+.+|+.+|++++ ||||+++      ......++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~-~--~~~vAiK~i--~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINIT-N--NEKVVVKIL--KPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEE--CSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECC-C--CCEEEEEEE--CHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            679999999999999999999987 6  889999983  2344678899999999995 9999987      24567999


Q ss_pred             EEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      ||||+++++|.++.+..++..+..++.||+.||.|||++||+||||||+|||++.++...+++|                
T Consensus       110 v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~  189 (328)
T d3bqca1         110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR  189 (328)
T ss_dssp             EEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSC
T ss_pred             EEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCccccc
Confidence            9999999999888776666667777779999999999999999999999999997775566666                


Q ss_pred             -----------------------eehhhHHHHHHhhCCCCCCCCc-chHHHHHHHHhhCCCCcCcCCCC---CCcccccc
Q 036362          139 -----------------------LISVGCIFAEMVIQEPLSEDAS-ESRERISIFRLMGEPSEETLPGV---TTFFPFIY  191 (246)
Q Consensus       139 -----------------------i~slG~i~~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  191 (246)
                                             +||+||++++|++|..||.... ...+...+...+|.+....+...   .....+..
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  269 (328)
T d3bqca1         190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND  269 (328)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGG
T ss_pred             ccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccch
Confidence                                   9999999999999999987544 44566666666665433221110   00111111


Q ss_pred             ccCCCCcchh-----hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCCC
Q 036362          192 CYEESEPKDL-----AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS  244 (246)
Q Consensus       192 ~~~~~~~~~~-----~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~~  244 (246)
                      ..........     ......+++++.|||++||..||++||||+|+|+||||+++.-
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         270 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             TCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             hcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            1111111111     1112357899999999999999999999999999999998753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-51  Score=329.82  Aligned_cols=239  Identities=25%  Similarity=0.298  Sum_probs=188.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC---CCcchhhhhhcccccCCCCceEEe---------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPISILTKISPLKEMDYPLIFRK---------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~---------~~~   69 (246)
                      ++|+++++||+|+||+||+|++.. +  ++.||+|+.....   .....+.+|+.+++.++||||+++         ...
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTK-T--GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   94 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETT-T--TEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTT
T ss_pred             CCeEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccccc
Confidence            689999999999999999999987 6  8899999832222   223467899999999999999987         123


Q ss_pred             ceEEEEEeccCcccHHHHHhhh--cccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC----------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNF--LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD----------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~----------------  131 (246)
                      ...+++++++.|++|.+++...  ++..+..++.||+.||+|||++||+||||||+|||++.++                
T Consensus        95 ~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~  174 (348)
T d2gfsa1          95 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE  174 (348)
T ss_dssp             CCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred             CceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcc
Confidence            3445566677789999998643  2334444455999999999999999999999999999776                


Q ss_pred             --------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc--cc
Q 036362          132 --------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF--PF  189 (246)
Q Consensus       132 --------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  189 (246)
                                          .....+|+||+||++++|++|++||.+.+.......+....+.+..+.........  .+
T Consensus       175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (348)
T d2gfsa1         175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY  254 (348)
T ss_dssp             GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred             cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence                                12233459999999999999999999999988999999988887766544433221  11


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...........+.....+++++++|||++||..||.+||||+|+|+||||+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence            223333444455566678999999999999999999999999999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6e-50  Score=323.96  Aligned_cols=210  Identities=17%  Similarity=0.275  Sum_probs=175.9

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc----cCCCCCcchhhhhhcccccCCCCceEEe----cCCceE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD----IIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLV   72 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~----~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~   72 (246)
                      |++|++++.||+|+||+||+|+++. +  ++.||+|+.    .........+.+|+.+++.++||||+++    ...+..
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~-~--g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  116 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKE-S--GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL  116 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECC-C--CCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccc
Confidence            5789999999999999999999987 6  788999972    1234455678999999999999999998    677889


Q ss_pred             EEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-----------
Q 036362           73 YQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-----------  138 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-----------  138 (246)
                      ++||||+.+++|.+++.+..   +.....++.||+.||.|||++||+||||||+|||++.++ ..+++|           
T Consensus       117 ~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g-~ikL~DFG~a~~~~~~~  195 (350)
T d1rdqe_         117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG-YIQVTDFGFAKRVKGRT  195 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-CEEECCCTTCEECSSCB
T ss_pred             ccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC-CEEeeeceeeeeccccc
Confidence            99999999999999987642   233344455999999999999999999999999999776 456655           


Q ss_pred             -------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                               +||+||++|+|++|..||.+.+....+..+...  .+.                 
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~-----------------  256 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVR-----------------  256 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCC-----------------
T ss_pred             ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC--CCC-----------------
Confidence                                     999999999999999999988776666666552  110                 


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                .+..+++++.+||++||..||.+|+     |++|+++||||++++
T Consensus       257 ----------~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         257 ----------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             ----------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             ----------CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCC
Confidence                      1246899999999999999999995     999999999999863

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.3e-50  Score=325.89  Aligned_cols=213  Identities=16%  Similarity=0.214  Sum_probs=167.6

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhh---hcccccCCCCceEEe----cCC
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTK---ISPLKEMDYPLIFRK----END   69 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E---~~~l~~l~~~~i~~~----~~~   69 (246)
                      |++|++++.||+|+||.||+|++.. +  ++.||+|+..    ........+.+|   +.+++.++||||+++    ...
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~-t--~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~   79 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKAD-T--GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP   79 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECC-C--CCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC
Confidence            6899999999999999999999987 6  7889999721    112222334444   677788899999998    667


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------  138 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------  138 (246)
                      +..|+||||++|++|.+++.+..   +.....++.||+.||.|||++||+||||||+|||++.++ .++++|        
T Consensus        80 ~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g-~iKl~DFGla~~~~  158 (364)
T d1omwa3          80 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS  158 (364)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS-CEEECCCTTCEECS
T ss_pred             CEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC-cEEEeeeceeeecC
Confidence            88999999999999999997643   223344455999999999999999999999999999776 455555        


Q ss_pred             ------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          139 ------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       139 ------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                    +||+||++|+|++|+.||.+................+.            
T Consensus       159 ~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~------------  226 (364)
T d1omwa3         159 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV------------  226 (364)
T ss_dssp             SSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC------------
T ss_pred             CCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC------------
Confidence                                          99999999999999999987654433322222111110            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCC-----HHHHhcCCCCcCCC
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERIT-----VNDALNHHYYRDVV  243 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  243 (246)
                                    ..+..+|+++++||.+||..||.+|||     |+|+++||||++++
T Consensus       227 --------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         227 --------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             --------------CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred             --------------CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCC
Confidence                          112468999999999999999999999     79999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-50  Score=321.95  Aligned_cols=209  Identities=16%  Similarity=0.189  Sum_probs=168.1

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      .|++++.||+|+||+||+|++.. +  ++.||+|......    .....+.+|+.++++++||||+++    .+.+..|+
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   92 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVR-N--SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETT-T--TEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECC-C--CcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEE
Confidence            49999999999999999999987 6  7889999832221    123468899999999999999998    56789999


Q ss_pred             EEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           75 IFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      ||||+++++|..++....   +.....++.||+.||.|||++||+||||||+|||++.++ ..++               
T Consensus        93 v~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~-~~Kl~DFG~a~~~~~~~~~  171 (309)
T d1u5ra_          93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-LVKLGDFGSASIMAPANSF  171 (309)
T ss_dssp             EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-EEEECCCTTCBSSSSBCCC
T ss_pred             EEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC-CEEEeecccccccCCCCcc
Confidence            999999999877665432   223334455999999999999999999999999999776 3333               


Q ss_pred             -----------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          137 -----------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       137 -----------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                             +|+||+||++++|++|..||.+.........+..... +..                
T Consensus       172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~-~~~----------------  234 (309)
T d1u5ra_         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-PAL----------------  234 (309)
T ss_dssp             CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCC----------------
T ss_pred             ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-CCC----------------
Confidence                                   4599999999999999999988777666665554211 000                


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                                ....+|+++++|+.+||+.||.+|||++|+|+||||..-
T Consensus       235 ----------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         235 ----------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             ----------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             ----------CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence                      013578999999999999999999999999999999753

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-50  Score=320.82  Aligned_cols=210  Identities=22%  Similarity=0.279  Sum_probs=172.5

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccc-cCCCCceEEe----cCCce
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLK-EMDYPLIFRK----ENDKL   71 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~-~l~~~~i~~~----~~~~~   71 (246)
                      |++|++++.||+|+||+||+|++.. +  ++.||+|+..    ........+.+|+.++. .++||||+++    .+++.
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~-t--~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~   77 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKK-T--NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   77 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETT-T--TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECC-C--CCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCc
Confidence            6899999999999999999999987 6  8899999821    23444556777777765 6899999998    67889


Q ss_pred             EEEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEE-----------
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIA-----------  137 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~-----------  137 (246)
                      .|+||||+++|+|.+++.....   .....++.||+.||.|||++||+||||||+|||++.++ ..+++           
T Consensus        78 ~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~-~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          78 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-HIKIADFGMCKENMLG  156 (320)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-CEEECCCTTCBCCCCT
T ss_pred             eeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCC-ceeccccchhhhcccc
Confidence            9999999999999999976432   23344445999999999999999999999999999766 33444           


Q ss_pred             ----------------------------EeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          138 ----------------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       138 ----------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  |+||+||++++|++|+.||.+.+.......+..  +.+.             
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~-------------  221 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNPF-------------  221 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCC-------------
T ss_pred             cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC-------------
Confidence                                        499999999999999999998877666655543  2111             


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHH-HHhcCCCCcCCC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVN-DALNHHYYRDVV  243 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~-e~l~h~~~~~~~  243 (246)
                                    .++.+|+++++|+++||+.||++|||+. |+++||||++++
T Consensus       222 --------------~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~  262 (320)
T d1xjda_         222 --------------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  262 (320)
T ss_dssp             --------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             --------------CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCC
Confidence                          1246799999999999999999999995 899999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-49  Score=318.13  Aligned_cols=238  Identities=24%  Similarity=0.382  Sum_probs=181.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhcc---ccCCCCCcchhhhhhcccccCCCCceEEe-----------
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA---DIIPDGVPISILTKISPLKEMDYPLIFRK-----------   66 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~---~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----------   66 (246)
                      +++|+++++||+|+||+||+|++.. +  ++.||+|+   .........++.+|+.+|++++||||+++           
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~   85 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRK-T--GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   85 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETT-T--CCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECC-C--CCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccc
Confidence            4789999999999999999999987 6  88999997   23344456678999999999999999987           


Q ss_pred             -cCCceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCee--------
Q 036362           67 -ENDKLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTV--------  134 (246)
Q Consensus        67 -~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~--------  134 (246)
                       ...+..+++|||++++++........   +.....++.||+.||.|||++||+||||||+|||++.++ ..        
T Consensus        86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~-~~kl~dfg~~  164 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLA  164 (318)
T ss_dssp             -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-CEEECCCTTC
T ss_pred             cccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCC-cEEeeeccee
Confidence             12457899999999666654443322   223334455999999999999999999999999999776 22        


Q ss_pred             ------------------------------------eEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          135 ------------------------------------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       135 ------------------------------------~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                          ..+|+||+||++++|++|++||.+.++......+.+..+.+.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  244 (318)
T d3blha1         165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  244 (318)
T ss_dssp             EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence                                                23459999999999999999999999889999999999998888


Q ss_pred             cCCCCCCccccccc-cCCCCcchhhhhC--CCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          179 TLPGVTTFFPFIYC-YEESEPKDLAILL--PDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       179 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      .+........+... .............  ...++++.|||.+||+.||++||||+|+|+||||++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            77665544322211 1111111111111  1357889999999999999999999999999999974

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-50  Score=328.11  Aligned_cols=238  Identities=21%  Similarity=0.250  Sum_probs=180.7

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCC---CCCcchhhhhhcccccCCCCceEEe----------c
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKEMDYPLIFRK----------E   67 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~----------~   67 (246)
                      +++|+++++||+|+||+||+|+++. +  ++.||+|+....   .....++.+|+.+++.++||||+++          .
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~-t--~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~   92 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAV-L--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE   92 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETT-T--TEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECC-C--CCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccc
Confidence            3689999999999999999999987 6  889999983222   2233468899999999999999997          1


Q ss_pred             CCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------
Q 036362           68 NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------  136 (246)
Q Consensus        68 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------  136 (246)
                      ...+.|+||||+.++.+..+....++..+..++.||+.||.|||++||+||||||+|||++.++ ..++           
T Consensus        93 ~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~-~~kl~df~~~~~~~~  171 (355)
T d2b1pa1          93 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGT  171 (355)
T ss_dssp             TCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECCCCC------
T ss_pred             cCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccc-ceeeechhhhhcccc
Confidence            4579999999999555544444444455556666999999999999999999999999999776 2233           


Q ss_pred             ---------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc-cc
Q 036362          137 ---------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF-FP  188 (246)
Q Consensus       137 ---------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  188 (246)
                                                 +|+||+||++++|++|++||.+.+...+...+....+.+.++.+...... ..
T Consensus       172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  251 (355)
T d2b1pa1         172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  251 (355)
T ss_dssp             ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred             ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence                                       34999999999999999999999998899999998888877765543322 11


Q ss_pred             cccccCCCCcchhhh------------hCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          189 FIYCYEESEPKDLAI------------LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                      +..............            .....+++++|||++||..||++||||+|+|+||||++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            111111111111110            111246789999999999999999999999999999863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-49  Score=322.38  Aligned_cols=237  Identities=28%  Similarity=0.374  Sum_probs=180.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----c-----CCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----E-----NDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~-----~~~   70 (246)
                      ++|++++.||+|+||+||+|++.. +  ++.||+|+...  .......+.+|+.+|+.++||||+++    .     ...
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNV-N--KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETT-T--CSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             CCeEEEEEEeeccCeEEEEEEECC-C--CcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccc
Confidence            479999999999999999999977 6  78899998322  12224578899999999999999987    1     123


Q ss_pred             eEEEEEeccCcccHHHHHhhhc--ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFL--DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------  138 (246)
                      ..++++ ++.+++|.+++....  +..+..++.||+.||+|||++||+||||||+|||++.++ ..+++|          
T Consensus        85 ~~~l~~-~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~-~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          85 DVYLVT-HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-DLKICDFGLARVADPD  162 (345)
T ss_dssp             CEEEEE-ECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-CEEECCCTTCEECCGG
T ss_pred             eEEEEE-eecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCC-CEEEcccCceeeccCC
Confidence            455555 556699999996532  333334455999999999999999999999999999776 344444          


Q ss_pred             ---------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          139 ---------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       139 ---------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                       +||+||++++|++|+.||.+.+..++........+.+..........
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhh
Confidence                                             99999999999999999999888888888888877776654333222


Q ss_pred             ccc--cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                      ...  ............+....+.+++++++|+.+||+.||.+||||+|+|+||||++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            211  1122333333445566778999999999999999999999999999999999653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=311.93  Aligned_cols=204  Identities=21%  Similarity=0.276  Sum_probs=164.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc-------CCCCCcchhhhhhcccccCC--CCceEEe----cC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI-------IPDGVPISILTKISPLKEMD--YPLIFRK----EN   68 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~-------~~~~~~~~~~~E~~~l~~l~--~~~i~~~----~~   68 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+..       .......++.+|+.++++++  ||||+++    .+
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~-~--~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVS-D--NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-T--CCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECC-C--CCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            589999999999999999999987 5  7889999721       11123456889999999986  8999998    67


Q ss_pred             CceEEEEEeccCc-ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------
Q 036362           69 DKLVYQIFEYTGL-LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------  138 (246)
Q Consensus        69 ~~~~~lv~e~~~~-~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------  138 (246)
                      .+..++||||+.+ +++.+++.+..   +.....+..||+.||.|||++||+||||||+|||++.++...+++|      
T Consensus        81 ~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECcccccee
Confidence            7899999999975 68888876542   2333444559999999999999999999999999996654555555      


Q ss_pred             --------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 --------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 --------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                      +||+||++++|++|+.||....+      +..  +..           
T Consensus       161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~------i~~--~~~-----------  221 (273)
T d1xwsa_         161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIR--GQV-----------  221 (273)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--CCC-----------
T ss_pred             cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH------Hhh--ccc-----------
Confidence                                            99999999999999999976432      111  100           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCCC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV  243 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~~  243 (246)
                                      ...+.+|+++++|+++||+.||++|||++|+|+||||+++.
T Consensus       222 ----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         222 ----------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             ----------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             ----------------CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence                            01246899999999999999999999999999999999863

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-49  Score=319.29  Aligned_cols=214  Identities=16%  Similarity=0.153  Sum_probs=161.7

Q ss_pred             CCCcccee-eeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccC-CCCceEEe--------cCCc
Q 036362            1 MEKYRKVE-LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DYPLIFRK--------ENDK   70 (246)
Q Consensus         1 l~~y~i~~-~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~--------~~~~   70 (246)
                      +++|++++ .||+|+||+||+|++.. +  ++.||+|+..    ....+.+|+.++.++ +||||+++        ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~-~--~~~vAiK~i~----~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKR-T--QEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETT-T--CCEEEEEEEE----CSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECC-C--CCEEEEEEEC----CcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            47899886 59999999999999987 6  7889999832    346788999987654 89999987        1246


Q ss_pred             eEEEEEeccCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeEEE-----
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKIAR-----  138 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~~D-----  138 (246)
                      .+|+|||||+||+|.+++.+.....+     ..++.||+.||+|||++||+||||||+|||++..+  ...+++|     
T Consensus        83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~  162 (335)
T d2ozaa1          83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  162 (335)
T ss_dssp             EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceee
Confidence            79999999999999999976432333     34444999999999999999999999999998533  1344444     


Q ss_pred             ---------------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          139 ---------------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       139 ---------------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                       +||+||++++|++|++||.+.+.......+........         
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~---------  233 (335)
T d2ozaa1         163 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ---------  233 (335)
T ss_dssp             ECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCS---------
T ss_pred             eccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCC---------
Confidence                                             99999999999999999987655443332222110000         


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCCcCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV  242 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~~~~  242 (246)
                              ...+    ...+..+|+++++||++||+.||++|||+.|+++||||.+.
T Consensus       234 --------~~~~----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         234 --------YEFP----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             --------SSCC----TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             --------CCCC----CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence                    0000    00113578999999999999999999999999999999764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-48  Score=310.93  Aligned_cols=217  Identities=14%  Similarity=0.224  Sum_probs=171.1

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccc-----cCCCCCcchhhhhhcccccCCC-CceEEe----cCCc
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-----IIPDGVPISILTKISPLKEMDY-PLIFRK----ENDK   70 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-----~~~~~~~~~~~~E~~~l~~l~~-~~i~~~----~~~~   70 (246)
                      |++|++++.||+|+||+||+|++......++.||+|..     .........+.+|+.++++++| |||+++    .+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            57899999999999999999987542223778999972     1223456789999999999966 899987    6678


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc---cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE-----------
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD---IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----------  136 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~-----------  136 (246)
                      ..+++|||+.+++|.+++.....   ......+.||+.||.|||++||+||||||+|||++.++ ..++           
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~-~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG-HVVLTDFGLSKEFVA  181 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-CEEESCSSEEEECCG
T ss_pred             ceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCC-CEEEeeccchhhhcc
Confidence            99999999999999999976542   22233344999999999999999999999999999877 2333           


Q ss_pred             -------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          137 -------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       137 -------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                     +|+||+||++++|++|..||.+.........+......+.+        
T Consensus       182 ~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~--------  253 (322)
T d1vzoa_         182 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--------  253 (322)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC--------
T ss_pred             cccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC--------
Confidence                                           45999999999999999999876655444443332111000        


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCC-----CHHHHhcCCCCcCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERI-----TVNDALNHHYYRDVV  243 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  243 (246)
                                       ..++.+|+++++|+.+||.+||.+||     |++|+++||||++++
T Consensus       254 -----------------~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         254 -----------------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             -----------------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             -----------------CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence                             01246899999999999999999999     589999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-47  Score=299.73  Aligned_cols=206  Identities=17%  Similarity=0.195  Sum_probs=165.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|+||.||+|+.+.    +..||+|+........+.+.+|+.++++++||||+++   ...+..++||||
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey   88 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNG----HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY   88 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETT----TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             HHeEEeEEEecCCCcEEEEEEECC----CCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEe
Confidence            578999999999999999999865    5679999855555566789999999999999999998   455678999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      +++|+|.+++.......+     ..++.||+.||.|||++||+||||||+|||++.++ .++++|               
T Consensus        89 ~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~-~~Kl~DFGla~~~~~~~~~~~  167 (272)
T d1qpca_          89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL-SCKIADFGLARLIEDNEYTAR  167 (272)
T ss_dssp             CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS-CEEECCCTTCEECSSSCEECC
T ss_pred             CCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeeccc-ceeeccccceEEccCCccccc
Confidence            999999998755332223     33444999999999999999999999999999765 556665               


Q ss_pred             -------------------------eehhhHHHHHHhhC-CCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               +|||||+++||++| .+|+......+....+......+                 
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~-----------------  230 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-----------------  230 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-----------------
T ss_pred             cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------
Confidence                                     99999999999995 55666655554444443311100                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc--CCCCc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN--HHYYR  240 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~--h~~~~  240 (246)
                                 .+..+++++.+|+.+||+.||++|||++|+++  |+||.
T Consensus       231 -----------~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         231 -----------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             -----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----------CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                       12467899999999999999999999999998  78875

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.3e-47  Score=299.08  Aligned_cols=203  Identities=15%  Similarity=0.166  Sum_probs=163.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||+||+|++.. +  +..||+|+........+.+.+|+.++++++||||+++    .+.+..++|||
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~-~--~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E   93 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKK-Y--SLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   93 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGG-G--TEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECC-C--CeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence            478899999999999999999987 5  7789999855555567789999999999999999998    56778999999


Q ss_pred             ccCcccHHHHHhhhcccccch-----HHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------
Q 036362           78 YTGLLNLRKVIKNFLDIINNP-----KTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~~~~~-----~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------  138 (246)
                      |+++|+|.+++.......+++     ++.||+.||+|||++||+||||||+|||++.++ .++++|              
T Consensus        94 ~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~-~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          94 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CEEECCCCCTTTCCSSSSEE
T ss_pred             cccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCC-cEEEccccceeecCCCCcee
Confidence            999999999997644333433     334999999999999999999999999999766 566666              


Q ss_pred             --------------------------eehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 --------------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                                +|||||+++||++|..|+............... +..                 
T Consensus       173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~-~~~-----------------  234 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYR-----------------  234 (287)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-TCC-----------------
T ss_pred             eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhc-CCC-----------------
Confidence                                      999999999999966655444333333333221 100                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                               ...++.+++++.+|+.+||+.||++|||++|+++
T Consensus       235 ---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         235 ---------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                     0112568899999999999999999999999976

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-47  Score=296.74  Aligned_cols=205  Identities=15%  Similarity=0.130  Sum_probs=161.3

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc---CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI---IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|++.++||+|+||+||+|+...      .||+|+..   ........+.+|+.++++++||||+++   ......++|
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~~------~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv   81 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWHG------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIV   81 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESSS------EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred             ccEEEEEEEeeCCCcEEEEEEECC------EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEE
Confidence            579999999999999999997644      38888732   233345678899999999999999998   555678999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeE---------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI---------------  136 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~---------------  136 (246)
                      |||+++|+|.+++.....    .....++.||+.||+|||++||+||||||+|||++.++ .+|+               
T Consensus        82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~-~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTS-SEEECCCCCSCC-------
T ss_pred             EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCC-CEEEccccceeeccccCCc
Confidence            999999999999965322    12233344999999999999999999999999999776 3333               


Q ss_pred             -----------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          137 -----------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       137 -----------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                   +|+|||||+++||++|+.||.+.+...+........-.+            
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~------------  228 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS------------  228 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCC------------
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCC------------
Confidence                                         359999999999999999998876665554444321111            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 .........+++++.+|+.+||+.||++|||++|++++
T Consensus       229 -----------p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         229 -----------PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             -----------CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                       11122235789999999999999999999999999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.2e-47  Score=298.24  Aligned_cols=210  Identities=17%  Similarity=0.211  Sum_probs=163.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCC----CCcchhhhhhcccccCCCCceEEe--------cCC
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD----GVPISILTKISPLKEMDYPLIFRK--------END   69 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~--------~~~   69 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+.....    .....+.+|+.+++.++||||+++        ...
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~-~--~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLR-L--HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSS
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECC-C--CCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCC
Confidence            579999999999999999999987 6  8889999832221    223468899999999999999987        123


Q ss_pred             ceEEEEEeccCcccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC---------------
Q 036362           70 KLVYQIFEYTGLLNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD---------------  131 (246)
Q Consensus        70 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~---------------  131 (246)
                      ...|+||||++|++|.+++....   +.....++.||+.||.|||++||+||||||+|||++.++               
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             ceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcc
Confidence            46899999999999999886643   223334455999999999999999999999999998766               


Q ss_pred             --------------------------CeeeEEEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCC
Q 036362          132 --------------------------YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT  185 (246)
Q Consensus       132 --------------------------~~~~~~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (246)
                                                .....+|+||+||++++|++|.+||.+.+..+....+...  .+.         
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~--~~~---------  232 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPI---------  232 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCC---------
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc--CCC---------
Confidence                                      0112245999999999999999999987776665555442  111         


Q ss_pred             ccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCCC
Q 036362          186 FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY  239 (246)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~~  239 (246)
                                    ......+.+|+++.+||.+||+.||.+||+..+.+.|+|.
T Consensus       233 --------------~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         233 --------------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             --------------CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             --------------CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence                          0111235789999999999999999999954444556664

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-46  Score=298.51  Aligned_cols=206  Identities=17%  Similarity=0.129  Sum_probs=161.9

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv   75 (246)
                      ++|++.+.||+|+||+||+|++..+.+....||+|....  .....+.+.+|+.++++++||||+++    ...+..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            578999999999999999999876332234577887322  22234578999999999999999998    566789999


Q ss_pred             EeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           76 FEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      |||+++|+|.+++.....    .....+..||+.||.|||++||+||||||+|||++.++ .++++|             
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~-~~Kl~DFGla~~~~~~~~~  184 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSD  184 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECCC------------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCC-cEEECCcccceEccCCCCc
Confidence            999999999998876322    12223444999999999999999999999999999766 445555             


Q ss_pred             -------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCc
Q 036362          139 -------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTF  186 (246)
Q Consensus       139 -------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (246)
                                                     ||||||+++||++ |..||.+....+....+......+           
T Consensus       185 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~-----------  253 (299)
T d1jpaa_         185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP-----------  253 (299)
T ss_dssp             -----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-----------
T ss_pred             ceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-----------
Confidence                                           9999999999998 899998877766555554421111           


Q ss_pred             cccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                       .+..+++++.+|+.+||+.||++|||+.|++++
T Consensus       254 -----------------~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         254 -----------------PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             -----------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             -----------------CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                             124678999999999999999999999998765

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=290.86  Aligned_cols=202  Identities=13%  Similarity=0.104  Sum_probs=167.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|+++++||+|+||.||+|+++.    +..||+|+..........+.+|+.+++.++||||+++    .+.+.+++|||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E   79 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRG----QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   79 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETT----TEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECC----CCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence            689999999999999999999864    6689999855555667889999999999999999998    56688999999


Q ss_pred             ccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           78 YTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      |+++|+|.+++......    ....+..|+++||.|||++||+||||||+|||++.++ ..+++|               
T Consensus        80 y~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~-~~kl~DfG~a~~~~~~~~~~~  158 (258)
T d1k2pa_          80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSRYVLDDEYTSS  158 (258)
T ss_dssp             CCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC-CEEECCCSSCCBCSSSSCCCC
T ss_pred             ccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCC-cEEECcchhheeccCCCceee
Confidence            99999999997543322    2223444999999999999999999999999999766 455555               


Q ss_pred             -------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 -------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               +|||||+++||++ |+.||.+.+..+....+.+....+.                
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------  222 (258)
T d1k2pa_         159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------------  222 (258)
T ss_dssp             CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC----------------
T ss_pred             cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----------------
Confidence                                     9999999999998 8999998877666555554211111                


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                  +...++++.+|+.+||+.||++|||++++++|
T Consensus       223 ------------p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         223 ------------PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             ------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ------------cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                        14578899999999999999999999999987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-46  Score=291.29  Aligned_cols=202  Identities=13%  Similarity=0.110  Sum_probs=163.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe----cCCceEEEEEe
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQIFE   77 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~lv~e   77 (246)
                      ++|++.+.||+|+||+||+|++.+    +..||+|+........+.+.+|+.++++++||||+++    ...+..++|||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~----~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E   80 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLN----KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   80 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETT----TEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECC----CCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEE
Confidence            589999999999999999999875    5579999855555566789999999999999999998    55678999999


Q ss_pred             ccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           78 YTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        78 ~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      |+++|+|.+++......    ....++.||+.||.|||+++|+||||||+|||++.++ .++++|               
T Consensus        81 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~-~~Kl~DFGla~~~~~~~~~~~  159 (263)
T d1sm2a_          81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSS  159 (263)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG-CEEECSCC-------------
T ss_pred             ecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCC-CeEecccchheeccCCCceee
Confidence            99999999998653221    1223444999999999999999999999999999766 445544               


Q ss_pred             -------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 -------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               +|||||+++||++ |.+||...+.......+......+                 
T Consensus       160 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~-----------------  222 (263)
T d1sm2a_         160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY-----------------  222 (263)
T ss_dssp             -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC-----------------
T ss_pred             cceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC-----------------
Confidence                                     9999999999998 567777666555555544421110                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 .+..+++++.+|+.+||+.||++|||++|+++|
T Consensus       223 -----------~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         223 -----------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                       014568999999999999999999999999986

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-46  Score=293.76  Aligned_cols=209  Identities=18%  Similarity=0.190  Sum_probs=168.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEec
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEY   78 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~   78 (246)
                      ++|++.+.||+|+||+||+|+++.    ...||+|+........+.+.+|+.++++++||||+++   ...+..++||||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~----~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey   92 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNG----TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY   92 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT----TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECC----CCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEe
Confidence            689999999999999999999877    3468999855555566789999999999999999998   445668999999


Q ss_pred             cCcccHHHHHhhhccccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE---------------
Q 036362           79 TGLLNLRKVIKNFLDIIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR---------------  138 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D---------------  138 (246)
                      +++|+|.+++.......+     ..+..||+.||+|||++||+||||||+|||++.++ .++++|               
T Consensus        93 ~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~-~~kl~DfGla~~~~~~~~~~~  171 (285)
T d1fmka3          93 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-VCKVADFGLARLIEDNEYTAR  171 (285)
T ss_dssp             CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-CEEECCCCTTC----------
T ss_pred             cCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCC-cEEEcccchhhhccCCCceee
Confidence            999999999865432223     33444999999999999999999999999999765 566666               


Q ss_pred             -------------------------eehhhHHHHHHhhC-CCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccc
Q 036362          139 -------------------------LISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC  192 (246)
Q Consensus       139 -------------------------i~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (246)
                                               ||||||+++||++| .+++......+.+..+......+                 
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~-----------------  234 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-----------------  234 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC-----------------
T ss_pred             ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------
Confidence                                     99999999999995 45555555544544444321111                 


Q ss_pred             cCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc--CCCCcCCC
Q 036362          193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN--HHYYRDVV  243 (246)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~--h~~~~~~~  243 (246)
                                 .++.+++++++|+.+||+.||++|||++++++  |+||.+..
T Consensus       235 -----------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         235 -----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             -----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             -----------CCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence                       12568899999999999999999999999998  89998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=296.01  Aligned_cols=209  Identities=14%  Similarity=0.137  Sum_probs=162.0

Q ss_pred             CCccceee-eCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVEL-IGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~-lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|.+.+. ||+|+||+||+|.+.. ...+..||||+..  ........+.+|++++++++||||+++   ...+..++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRM-RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEec-CCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEE
Confidence            46778884 9999999999998765 3224578999832  222334678999999999999999998   334578999


Q ss_pred             EeccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           76 FEYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      |||+++|+|.+++....    ......++.||+.||.|||++||+||||||+|||++.++ .++++|             
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~-~~Kl~DFGla~~~~~~~~~  165 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH-YAKISDFGLSKALGADDSY  165 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT-EEEECCCTTCEECTTCSCE
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCC-ceeeccchhhhcccccccc
Confidence            99999999999975432    222333444999999999999999999999999999776 455555             


Q ss_pred             -----------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccc
Q 036362          139 -----------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP  188 (246)
Q Consensus       139 -----------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (246)
                                                   ||||||+++||++ |..||.+.+..+....+...  ...            
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~--~~~------------  231 (285)
T d1u59a_         166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG--KRM------------  231 (285)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT--CCC------------
T ss_pred             cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--CCC------------
Confidence                                         9999999999997 89999987766555544431  100            


Q ss_pred             cccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHH---hcCCCCc
Q 036362          189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA---LNHHYYR  240 (246)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~---l~h~~~~  240 (246)
                                    +.++.+++++.+|+.+||+.||++|||+.++   |+|+|+.
T Consensus       232 --------------~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         232 --------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             --------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------------CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                          1125688999999999999999999999888   5677763

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-46  Score=294.19  Aligned_cols=203  Identities=17%  Similarity=0.182  Sum_probs=157.2

Q ss_pred             eeeCCccceEEEEEEEcccccchhhhhhccccC---CCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEEeccCc
Q 036362            8 ELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIFEYTGL   81 (246)
Q Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~e~~~~   81 (246)
                      ++||+|+||+||+|.+.. ...++.||+|+...   .......+.+|+.++++++||||+++   ...+..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQM-KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEEC-SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEcc-CCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCC
Confidence            369999999999998754 32367899998322   22234578999999999999999998   334568999999999


Q ss_pred             ccHHHHHhhhc---ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------------
Q 036362           82 LNLRKVIKNFL---DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------------  138 (246)
Q Consensus        82 ~~L~~~~~~~~---~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------------  138 (246)
                      |+|.+++.+..   ......+..||+.||.|||++||+||||||+|||++.++ ..+++|                    
T Consensus        92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~-~~kl~DFGla~~~~~~~~~~~~~~~~  170 (277)
T d1xbba_          92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH-YAKISDFGLSKALRADENYYKAQTHG  170 (277)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT-EEEECCCTTCEECCTTCSEEEC----
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccC-cccccchhhhhhcccccccccccccc
Confidence            99999987643   222333444999999999999999999999999999776 344444                    


Q ss_pred             ----------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCccccccccCC
Q 036362          139 ----------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEE  195 (246)
Q Consensus       139 ----------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (246)
                                            +|||||+++||++ |+.||.+.+..+....+..  |...                   
T Consensus       171 ~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~--~~~~-------------------  229 (277)
T d1xbba_         171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK--GERM-------------------  229 (277)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT--TCCC-------------------
T ss_pred             CCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc--CCCC-------------------
Confidence                                  9999999999997 8999998776554444433  1100                   


Q ss_pred             CCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHH---hcCCCCc
Q 036362          196 SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA---LNHHYYR  240 (246)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~---l~h~~~~  240 (246)
                             ..+..+|+++.+|+.+||+.||++|||++++   |+|+|++
T Consensus       230 -------~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         230 -------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             -------CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence                   0124678999999999999999999999998   4666654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-46  Score=299.29  Aligned_cols=207  Identities=12%  Similarity=0.104  Sum_probs=161.7

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc--chhhhhhccc--cCCCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKAD--IIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~--~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.++||+|+||+||+|++..+.+  ....||+|..  .........+.+|+.++.++ +||||+++    ...+..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            578999999999999999999865221  1236788872  23444566889999999998 89999998    667889


Q ss_pred             EEEEeccCcccHHHHHhhhcc--------------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeE
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD--------------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQAL  126 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~--------------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil  126 (246)
                      ++||||+++|+|.+++.....                          .....++.||+.||.|||++||+||||||+|||
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nil  196 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL  196 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccc
Confidence            999999999999999965321                          112224449999999999999999999999999


Q ss_pred             EecCCCeeeEEE-----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHH
Q 036362          127 INLSDYTVKIAR-----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRE  164 (246)
Q Consensus       127 ~~~~~~~~~~~D-----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~  164 (246)
                      ++.++ .++++|                                         +|||||+++||++ |.+||.+.+....
T Consensus       197 l~~~~-~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         197 VTHGK-VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             EETTT-EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             cccCC-eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence            99766 555555                                         9999999999997 8999988776666


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      +..+......+                           +.+..+|+++++|+.+||+.||++|||++|+++|
T Consensus       276 ~~~~~~~~~~~---------------------------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         276 FYKLIQNGFKM---------------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHHTTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCC---------------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            55554421110                           0124678999999999999999999999999976

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-46  Score=290.50  Aligned_cols=206  Identities=19%  Similarity=0.217  Sum_probs=163.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||.||+|++..+...+..||+|...  ........+.+|+.++++++||||+++   ...+..++||
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~   86 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM   86 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEE
Confidence            68999999999999999999987633224567787732  222224578899999999999999998   4457889999


Q ss_pred             eccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--------------
Q 036362           77 EYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--------------  138 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--------------  138 (246)
                      ||+++|+|.+++.....    .....++.||+.||.|||++||+||||||+||+++.++ ..+++|              
T Consensus        87 E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~-~~Kl~DfG~a~~~~~~~~~~  165 (273)
T d1mp8a_          87 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYK  165 (273)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT-EEEECC--------------
T ss_pred             EeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCC-cEEEccchhheeccCCccee
Confidence            99999999998765321    22233344999999999999999999999999999776 455555              


Q ss_pred             --------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccc
Q 036362          139 --------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIY  191 (246)
Q Consensus       139 --------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (246)
                                                +|||||+++||++ |.+||.+.+..+....+...  ...               
T Consensus       166 ~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~--~~~---------------  228 (273)
T d1mp8a_         166 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERL---------------  228 (273)
T ss_dssp             -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT--CCC---------------
T ss_pred             ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCC---------------
Confidence                                      9999999999987 89999988777666555442  110               


Q ss_pred             ccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          192 CYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                 ..++++|+++.+|+.+||+.||.+|||+.|+++|
T Consensus       229 -----------~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         229 -----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                       0125789999999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-45  Score=283.22  Aligned_cols=201  Identities=13%  Similarity=0.155  Sum_probs=159.0

Q ss_pred             CCCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEE
Q 036362            1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQI   75 (246)
Q Consensus         1 l~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv   75 (246)
                      +++|++.++||+|+||.||+|+.++     ..||+|+.. .....+.+.+|+.++++++||||+++     ...+.+++|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~vAvK~i~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv   79 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   79 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-----EEEEEEECC-CCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEECC-----eEEEEEEEC-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEE
Confidence            4789999999999999999999854     368999843 34456789999999999999999998     334668999


Q ss_pred             EeccCcccHHHHHhhhccc-----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI-----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~-----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      |||+++|+|.+++.+....     ....+..||+.||.|||+++|+||||||+|||++.++ ..+++|            
T Consensus        80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~-~~kl~dfg~s~~~~~~~~  158 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQD  158 (262)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-CEEECCCCC---------
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCC-CEeecccccceecCCCCc
Confidence            9999999999999654322     2233444999999999999999999999999999776 344443            


Q ss_pred             ------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccccccc
Q 036362          139 ------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY  193 (246)
Q Consensus       139 ------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (246)
                                              ||||||+++||++ |++||...+..+....+....-                    
T Consensus       159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~--------------------  218 (262)
T d1byga_         159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK--------------------  218 (262)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC--------------------
T ss_pred             cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--------------------
Confidence                                    9999999999998 7888887766555544433100                    


Q ss_pred             CCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          194 EESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                              .+.++.+++++.+|+.+||..||.+|||+.+++++
T Consensus       219 --------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         219 --------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                    01125678999999999999999999999999874

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-44  Score=283.23  Aligned_cols=206  Identities=16%  Similarity=0.130  Sum_probs=156.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcccc----CCCCCcchhhhhhcccccCCCCceEEe---cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI----IPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~l   74 (246)
                      ++|++.+.||+|+||.||+|+...++.....||+|...    ......+.+.+|+.++++++||||+++   ......++
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            57999999999999999999876534224468888722    223334578999999999999999998   33457889


Q ss_pred             EEeccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           75 IFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      ||||++++++.+++.....    .....+..||+.||.|||++||+||||||+||+++.++ .++++|            
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~-~vkl~DfGl~~~~~~~~~  166 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD-LVKIGDFGLMRALPQNDD  166 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT-EEEECCCTTCEECCC-CC
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccccc-ceeeccchhhhhcccCCC
Confidence            9999999999988765332    22223344999999999999999999999999999776 445544            


Q ss_pred             ------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          139 ------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       139 ------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                    +||||++++||++ |..||.+.+..+....+.+..-.+            
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~------------  234 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL------------  234 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC------------
T ss_pred             cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC------------
Confidence                                          9999999999997 899999887777666555421000            


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     +.++.+|+++.+|+.+||..||++|||+.|+++
T Consensus       235 ---------------~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         235 ---------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             ---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                           012568899999999999999999999999863

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-44  Score=286.86  Aligned_cols=205  Identities=17%  Similarity=0.184  Sum_probs=158.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc--ccCCCCCcchhhhhhcccccC-CCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA--DIIPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~--~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~~l   74 (246)
                      ++|++.++||+|+||+||+|++.. +.....||+|.  ........+.+.+|+.+++++ +||||+++    ...+..++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKK-DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEE-TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECC-CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            589999999999999999999977 41122466776  233444567899999999998 79999998    56788999


Q ss_pred             EEeccCcccHHHHHhhhc--------------ccccc-----hHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeee
Q 036362           75 IFEYTGLLNLRKVIKNFL--------------DIINN-----PKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVK  135 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~--------------~~~~~-----~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~  135 (246)
                      ||||+++|+|.+++....              ...+.     .+..||+.||.|||++||+||||||+|||++.++ .++
T Consensus        89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~-~~k  167 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-VAK  167 (309)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-CEE
T ss_pred             EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC-ceE
Confidence            999999999999996531              12222     2344999999999999999999999999999765 445


Q ss_pred             EEE--------------------------------------eehhhHHHHHHhhCC-CCCCCCcchHHHHHHHHhhCCCC
Q 036362          136 IAR--------------------------------------LISVGCIFAEMVIQE-PLSEDASESRERISIFRLMGEPS  176 (246)
Q Consensus       136 ~~D--------------------------------------i~slG~i~~~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~  176 (246)
                      ++|                                      +|||||+++||++|. +||.+.+..+....+.+....  
T Consensus       168 l~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~--  245 (309)
T d1fvra_         168 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL--  245 (309)
T ss_dssp             ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCC--
T ss_pred             EccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCC--
Confidence            555                                      999999999999965 578777666555444331100  


Q ss_pred             cCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                                ..+..+++++++|+.+||+.||++|||++|+++|
T Consensus       246 --------------------------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         246 --------------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             --------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                                      0124678999999999999999999999999976

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-44  Score=284.91  Aligned_cols=206  Identities=17%  Similarity=0.164  Sum_probs=158.8

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc-chhhhhhccc--cCCCCCcchhhhhhcccccCCCCceEEe---cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKAD--IIPDGVPISILTKISPLKEMDYPLIFRK---ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~-~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~~~~i~~~---~~~~~~~lv   75 (246)
                      ++|+++++||+|+||+||+|.+..+.+ ...+||+|..  .......+.+.+|+.++++++||||+++   ...+..+++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            479999999999999999999876321 1225777762  2334456689999999999999999998   334567888


Q ss_pred             EeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE-------------
Q 036362           76 FEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------  138 (246)
Q Consensus        76 ~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D-------------  138 (246)
                      ++++.+++|.+++......    ....++.||+.||.|||++||+||||||+|||++.++ ..+++|             
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~~~  167 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKE  167 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT-EEEECCCSHHHHTTTTCC-
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCC-CeEeeccccceeccccccc
Confidence            9999999999888654321    1223444999999999999999999999999999776 555555             


Q ss_pred             ----------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcccc
Q 036362          139 ----------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF  189 (246)
Q Consensus       139 ----------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (246)
                                                  +|||||+++||++ |.+||.+.+..+....+......+              
T Consensus       168 ~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~--------------  233 (317)
T d1xkka_         168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP--------------  233 (317)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCC--------------
T ss_pred             ccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence                                        9999999999998 788998776655544444311000              


Q ss_pred             ccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                    .++.+++++.+|+.+||..||.+|||+.|+++|
T Consensus       234 --------------~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         234 --------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             --------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------------CCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                          124678999999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-44  Score=283.41  Aligned_cols=213  Identities=18%  Similarity=0.188  Sum_probs=167.4

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||+||+|.+..+.  ..+..||+|+.....  .....+.+|+.++++++||||+++    ...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            57899999999999999999875411  125689999832221  223457899999999999999998    5567899


Q ss_pred             EEEeccCcccHHHHHhhhcc-------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE--
Q 036362           74 QIFEYTGLLNLRKVIKNFLD-------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR--  138 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D--  138 (246)
                      +||||+++|+|.+++.....             .....++.|+++||.|||+++|+||||||+|||++.++ .++++|  
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~-~~Kl~DFG  178 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-TVKIGDFG  178 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC-CEEECCTT
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCc-eEEEeecc
Confidence            99999999999999864321             11223455999999999999999999999999999665 566666  


Q ss_pred             ---------------------------------------eehhhHHHHHHhhC-CCCCCCCcchHHHHHHHHhhCCCCcC
Q 036362          139 ---------------------------------------LISVGCIFAEMVIQ-EPLSEDASESRERISIFRLMGEPSEE  178 (246)
Q Consensus       139 ---------------------------------------i~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (246)
                                                             +|||||+++||++| .+||.+.+..+.+..+.+....    
T Consensus       179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~----  254 (308)
T d1p4oa_         179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL----  254 (308)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC----
T ss_pred             cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCC----
Confidence                                                   99999999999997 5788877776666555441100    


Q ss_pred             cCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc------CCCCcCCC
Q 036362          179 TLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN------HHYYRDVV  243 (246)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~------h~~~~~~~  243 (246)
                                              ..++.+++.+.+|+.+||+.||.+|||+.++++      +|+|++++
T Consensus       255 ------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~~~  301 (308)
T d1p4oa_         255 ------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS  301 (308)
T ss_dssp             ------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHC
T ss_pred             ------------------------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcCCC
Confidence                                    012467899999999999999999999999997      88887653

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-43  Score=281.30  Aligned_cols=205  Identities=14%  Similarity=0.153  Sum_probs=161.4

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhccccCCC--CCcchhhhhhcccccCCCCceEEe----cCCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADIIPD--GVPISILTKISPLKEMDYPLIFRK----ENDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~   73 (246)
                      ++|++.+.||+|+||+||+|++...  ...+..||+|+.....  .....+.+|+.+++.++||||+++    ...+..+
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   92 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC   92 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence            5799999999999999999997641  1125689999832222  224578999999999999999998    5678899


Q ss_pred             EEEeccCcccHHHHHhhhccc---------------------------ccchHHHHHHHHHHHHhhCceeeccCCCCCeE
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI---------------------------INNPKTAKILRVLSYYHSNRCLHGRLNPYQAL  126 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~---------------------------~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil  126 (246)
                      ++|||+++++|.+++......                           ....+..|++.||+|||++||+||||||+|||
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NIL  172 (301)
T d1lufa_          93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL  172 (301)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceE
Confidence            999999999999998653211                           11223339999999999999999999999999


Q ss_pred             EecCCCeeeEEE-----------------------------------------eehhhHHHHHHhhCC-CCCCCCcchHH
Q 036362          127 INLSDYTVKIAR-----------------------------------------LISVGCIFAEMVIQE-PLSEDASESRE  164 (246)
Q Consensus       127 ~~~~~~~~~~~D-----------------------------------------i~slG~i~~~l~~g~-~~~~~~~~~~~  164 (246)
                      ++.++ .++++|                                         +|||||+++||++|. +||.+.+..+.
T Consensus       173 ld~~~-~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~  251 (301)
T d1lufa_         173 VGENM-VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV  251 (301)
T ss_dssp             ECGGG-CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             ECCCC-cEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence            99765 556666                                         999999999999984 67888777666


Q ss_pred             HHHHHHhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ...+.+.  ..                          ...+..+++++.+|+.+||+.||++|||+.|+++
T Consensus       252 ~~~v~~~--~~--------------------------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         252 IYYVRDG--NI--------------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHTT--CC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcC--CC--------------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            5555441  10                          0112578899999999999999999999999964

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-43  Score=275.59  Aligned_cols=205  Identities=17%  Similarity=0.120  Sum_probs=155.5

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc-cchhhhhhccccC--CCCCcchhhhhhcccccCCCCceEEe----cCCceEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADII--PDGVPISILTKISPLKEMDYPLIFRK----ENDKLVYQ   74 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~-~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~----~~~~~~~l   74 (246)
                      +.|++.++||+|+||.||+|.+..+. .....||+|....  .......+.+|+.+++.++||||+++    ...+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            57899999999999999999887622 1124689998322  22223468899999999999999998    56678999


Q ss_pred             EEeccCcccHHHHHhhhccc----ccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE------------
Q 036362           75 IFEYTGLLNLRKVIKNFLDI----INNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR------------  138 (246)
Q Consensus        75 v~e~~~~~~L~~~~~~~~~~----~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D------------  138 (246)
                      ||||+.++++.+++......    ....+..||+.||.|||++||+||||||+|||++.++ .+|++|            
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~-~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-CEEECCCCC---------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCC-eEEEcccchhhcccCCCc
Confidence            99999999999887654321    1223344999999999999999999999999999766 455555            


Q ss_pred             ------------------------------eehhhHHHHHHhhCCC-CCCCCcchHHHHHHHHhhCCCCcCcCCCCCCcc
Q 036362          139 ------------------------------LISVGCIFAEMVIQEP-LSEDASESRERISIFRLMGEPSEETLPGVTTFF  187 (246)
Q Consensus       139 ------------------------------i~slG~i~~~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (246)
                                                    +|||||+++||+++.. |+...+..+....+......             
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~-------------  232 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL-------------  232 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-------------
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC-------------
Confidence                                          9999999999999544 55554444443333321100             


Q ss_pred             ccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                                     ..+..+++++.+|+.+||..||++|||+.|+++
T Consensus       233 ---------------~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         233 ---------------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             ---------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---------------CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence                           012457899999999999999999999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=281.35  Aligned_cols=207  Identities=14%  Similarity=0.174  Sum_probs=157.8

Q ss_pred             CCccceeeeCCccceEEEEEEEcccc--cchhhhhhcccc--CCCCCcchhhhhhcccccC-CCCceEEe-----cCCce
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAE--NAYQTVLLKADI--IPDGVPISILTKISPLKEM-DYPLIFRK-----ENDKL   71 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~--~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l-~~~~i~~~-----~~~~~   71 (246)
                      ++|++.++||+|+||.||+|++..+.  ..++.||+|...  ........+.+|..++.++ +|+||+.+     ..++.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            57999999999999999999976521  125678999832  2222345677788877777 68899876     44567


Q ss_pred             EEEEEeccCcccHHHHHhhhcc-------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCC
Q 036362           72 VYQIFEYTGLLNLRKVIKNFLD-------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDY  132 (246)
Q Consensus        72 ~~lv~e~~~~~~L~~~~~~~~~-------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~  132 (246)
                      .++||||+++|+|.+++.....                   .....++.||+.||.|||++||+||||||+|||++.++ 
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~-  171 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-  171 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG-
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCC-
Confidence            8999999999999999965321                   11223344999999999999999999999999999766 


Q ss_pred             eeeEEE-----------------------------------------eehhhHHHHHHhhC-CCCCCCCcchHHHHHHHH
Q 036362          133 TVKIAR-----------------------------------------LISVGCIFAEMVIQ-EPLSEDASESRERISIFR  170 (246)
Q Consensus       133 ~~~~~D-----------------------------------------i~slG~i~~~l~~g-~~~~~~~~~~~~~~~~~~  170 (246)
                      ..|++|                                         |||+||+++||++| .+||.+......+.....
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~  251 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  251 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            556655                                         99999999999986 568887666555544444


Q ss_pred             hhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          171 LMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      ....+                           ..+..+++++.+|+.+||+.||++|||++|+++|
T Consensus       252 ~~~~~---------------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         252 EGTRM---------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HTCCC---------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCC---------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            21111                           0124678999999999999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-43  Score=280.34  Aligned_cols=205  Identities=16%  Similarity=0.161  Sum_probs=153.8

Q ss_pred             CCccceeeeCCccceEEEEEEEccccc----chhhhhhccccCCC--CCcchhhhhhcccccC-CCCceEEe----cCCc
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAEN----AYQTVLLKADIIPD--GVPISILTKISPLKEM-DYPLIFRK----ENDK   70 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~   70 (246)
                      ++|++.+.||+|+||.||+|+...+.+    .+..||+|+.....  .....+.+|...+..+ +||||+++    .+.+
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            689999999999999999998765321    13478999832222  2346778888888888 79999998    5677


Q ss_pred             eEEEEEeccCcccHHHHHhhhcc--------------ccc-----chHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           71 LVYQIFEYTGLLNLRKVIKNFLD--------------IIN-----NPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        71 ~~~lv~e~~~~~~L~~~~~~~~~--------------~~~-----~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      ..++||||+++|+|.+++.....              ..+     ..++.||+.||+|||++||+||||||+|||++.++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~  172 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN  172 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCC
Confidence            89999999999999999964321              122     23334999999999999999999999999999776


Q ss_pred             CeeeEE-----------------------------------------EeehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVKIA-----------------------------------------RLISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~~~-----------------------------------------Di~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       ..+++                                         |+|||||++++|++ |.+||.+.+.......+.
T Consensus       173 -~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~  251 (299)
T d1fgka_         173 -VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK  251 (299)
T ss_dssp             -CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             -CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHH
Confidence             33444                                         49999999999997 788998777655444433


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ..  ...                          ..+..+++++.+|+.+||+.||.+|||+.|+++
T Consensus       252 ~~--~~~--------------------------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         252 EG--HRM--------------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             TT--CCC--------------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cC--CCC--------------------------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            31  110                          012467899999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-42  Score=276.84  Aligned_cols=206  Identities=14%  Similarity=0.114  Sum_probs=160.2

Q ss_pred             CCccceeeeCCccceEEEEEEEccc--ccchhhhhhcccc--CCCCCcchhhhhhcccccC-CCCceEEe----cCCceE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVA--ENAYQTVLLKADI--IPDGVPISILTKISPLKEM-DYPLIFRK----ENDKLV   72 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~--~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l-~~~~i~~~----~~~~~~   72 (246)
                      ++|++.++||+|+||.||+|++...  ...+..||+|+..  ........+.+|+.+++.+ +||||+++    ...+..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            5788999999999999999987431  1236789999832  2223345688999999999 69999998    566789


Q ss_pred             EEEEeccCcccHHHHHhhhcc---------------------cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC
Q 036362           73 YQIFEYTGLLNLRKVIKNFLD---------------------IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD  131 (246)
Q Consensus        73 ~lv~e~~~~~~L~~~~~~~~~---------------------~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~  131 (246)
                      +++|||+++++|.+++.....                     .....+..||+.||+|||++|++||||||+||+++.++
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~  182 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR  182 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccC
Confidence            999999999999999865321                     11222344999999999999999999999999999766


Q ss_pred             CeeeEEE-----------------------------------------eehhhHHHHHHhh-CCCCCCCCcchHHHHHHH
Q 036362          132 YTVKIAR-----------------------------------------LISVGCIFAEMVI-QEPLSEDASESRERISIF  169 (246)
Q Consensus       132 ~~~~~~D-----------------------------------------i~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~  169 (246)
                       ..+++|                                         +|||||+++||++ |.++|........+..+.
T Consensus       183 -~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i  261 (311)
T d1t46a_         183 -ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (311)
T ss_dssp             -EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             -cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence             444444                                         9999999999998 677777766666655555


Q ss_pred             HhhCCCCcCcCCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhc
Q 036362          170 RLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALN  235 (246)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~  235 (246)
                      ...-.+.                           .+..+++.+.+|+.+||+.||.+|||+.++++
T Consensus       262 ~~~~~~~---------------------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         262 KEGFRML---------------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHTCCCC---------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcCCCCC---------------------------CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            4211110                           11457899999999999999999999999885

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-42  Score=271.82  Aligned_cols=202  Identities=15%  Similarity=0.177  Sum_probs=150.3

Q ss_pred             ceeeeCCccceEEEEEEEcccccchhhhhhcccc--CCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEEec
Q 036362            6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADI--IPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIFEY   78 (246)
Q Consensus         6 i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~e~   78 (246)
                      ..++||+|+||+||+|+...+......||+|...  .......++.+|++++++++||||+++     ...+..++||||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            3678999999999999987633112357888732  233334679999999999999999998     345689999999


Q ss_pred             cCcccHHHHHhhhcccc----cchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEE----------------
Q 036362           79 TGLLNLRKVIKNFLDII----NNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------  138 (246)
Q Consensus        79 ~~~~~L~~~~~~~~~~~----~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~D----------------  138 (246)
                      +++++|.+++.......    ...+..|++.||.|||++||+||||||+|||++.++ .++++|                
T Consensus       111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~-~~kL~DFG~~~~~~~~~~~~~~  189 (311)
T d1r0pa_         111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVH  189 (311)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-CEEECSSGGGCCTTTTTCCCTT
T ss_pred             eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCC-CEEEecccchhhccccccccce
Confidence            99999999987543221    123344999999999999999999999999999654 566665                


Q ss_pred             ---------------------------eehhhHHHHHHhhCCCCCCCCcch-HHHHHHHHhhCCCCcCcCCCCCCccccc
Q 036362          139 ---------------------------LISVGCIFAEMVIQEPLSEDASES-RERISIFRLMGEPSEETLPGVTTFFPFI  190 (246)
Q Consensus       139 ---------------------------i~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (246)
                                                 +||||++++||++|..||...... +....+..  |...              
T Consensus       190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~--g~~~--------------  253 (311)
T d1r0pa_         190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--GRRL--------------  253 (311)
T ss_dssp             CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT--TCCC--------------
T ss_pred             ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc--CCCC--------------
Confidence                                       999999999999977666543322 22222222  1100              


Q ss_pred             cccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          191 YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                                  ..++.+++++.+|+.+||..||++|||+.|+++|
T Consensus       254 ------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         254 ------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                        0124678999999999999999999999999988

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.6e-42  Score=279.84  Aligned_cols=238  Identities=21%  Similarity=0.277  Sum_probs=159.4

Q ss_pred             CccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC-----------CceEEe-----
Q 036362            3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY-----------PLIFRK-----   66 (246)
Q Consensus         3 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-----------~~i~~~-----   66 (246)
                      +|+++++||+|+||+||+|++.. +  ++.||+|+............+|+.+++.++|           +||+++     
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~-~--g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMV-N--NTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETT-T--TEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECC-C--CCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            69999999999999999999987 6  8899999844333345677889988887754           667766     


Q ss_pred             -cCCceEEEEEeccCc-ccHHHHHhhhccc-----ccchHHHHHHHHHHHHhh-CceeeccCCCCCeEEecCCC-----e
Q 036362           67 -ENDKLVYQIFEYTGL-LNLRKVIKNFLDI-----INNPKTAKILRVLSYYHS-NRCLHGRLNPYQALINLSDY-----T  133 (246)
Q Consensus        67 -~~~~~~~lv~e~~~~-~~L~~~~~~~~~~-----~~~~~~~qil~~L~~lH~-~~i~H~Dikp~Nil~~~~~~-----~  133 (246)
                       ......++++.++.+ ++...........     .+..++.||+.||.|||+ +||+||||||+|||++.++.     .
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccce
Confidence             233455566666543 3333333322222     233345599999999998 89999999999999986641     1


Q ss_pred             eeE------------------------------------EEeehhhHHHHHHhhCCCCCCCCcc------hHHHHHHHHh
Q 036362          134 VKI------------------------------------ARLISVGCIFAEMVIQEPLSEDASE------SRERISIFRL  171 (246)
Q Consensus       134 ~~~------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~------~~~~~~~~~~  171 (246)
                      .++                                    +|+||+||++++|++|+.||.....      ..........
T Consensus       171 ~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~  250 (362)
T d1q8ya_         171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  250 (362)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             eeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHH
Confidence            222                                    4499999999999999999975432      3455666677


Q ss_pred             hCCCCcCcCCCCCCcc---------ccccccCCCCcch-hh---hhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcCCC
Q 036362          172 MGEPSEETLPGVTTFF---------PFIYCYEESEPKD-LA---ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY  238 (246)
Q Consensus       172 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~---~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h~~  238 (246)
                      +|.++.+.+.......         ........+.... ..   ...+..+++++|||.+||.+||.+||||+|+|+|||
T Consensus       251 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~  330 (362)
T d1q8ya_         251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPW  330 (362)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGG
T ss_pred             hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            7776554332111100         0000001111111 00   111235678999999999999999999999999999


Q ss_pred             CcCCC
Q 036362          239 YRDVV  243 (246)
Q Consensus       239 ~~~~~  243 (246)
                      |+++.
T Consensus       331 f~~~~  335 (362)
T d1q8ya_         331 LKDTL  335 (362)
T ss_dssp             GTTCT
T ss_pred             cCCCC
Confidence            99764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-40  Score=264.77  Aligned_cols=213  Identities=15%  Similarity=0.169  Sum_probs=154.1

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe-----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~-----~~~~~~~lv~   76 (246)
                      ++|++.+.||+|+||+||+|++.. +  ++.||+|+... ......+.+|+++++.++|++++..     ...+..++||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~-~--~~~vAvK~~~~-~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIA-A--GEEVAIKLECV-KTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETT-T--TEEEEEEEEES-CTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECC-C--CCEEEEEEEch-hccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence            479999999999999999999977 5  77899998332 2345678999999999987765543     5677899999


Q ss_pred             eccCcccHHHHHhhhc----ccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCC--CeeeE--------------
Q 036362           77 EYTGLLNLRKVIKNFL----DIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSD--YTVKI--------------  136 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~----~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~--~~~~~--------------  136 (246)
                      ||++ ++|.+.+....    ......+..|++.||+|||++||+||||||+|||++..+  ...++              
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          83 ELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             ECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             EEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            9998 77766664322    222333344999999999999999999999999976433  12333              


Q ss_pred             --------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCCCCcCcCCCCC
Q 036362          137 --------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT  184 (246)
Q Consensus       137 --------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (246)
                                                      +|+|||||+++||++|..||...........+.....           
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~-----------  230 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE-----------  230 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH-----------
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc-----------
Confidence                                            3499999999999999999987554433222221100           


Q ss_pred             CccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHH---HhcCCCCc
Q 036362          185 TFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVND---ALNHHYYR  240 (246)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e---~l~h~~~~  240 (246)
                                ...........+++|+++.+|+.+||+.||++||++.+   +|+|+|.+
T Consensus       231 ----------~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         231 ----------KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             ----------HHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----------ccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence                      00001122334678999999999999999999999874   57777654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-39  Score=257.89  Aligned_cols=219  Identities=13%  Similarity=0.086  Sum_probs=145.2

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCceEEe------c--CCceEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK------E--NDKLVY   73 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~------~--~~~~~~   73 (246)
                      .+|.+.+.||+|+||.||+|+..     +..||+|+.............|+..+..++||||+++      .  .....+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-----g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~   77 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-----GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-----TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-----CEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence            47899999999999999999863     5589999843332222334456667778899999997      1  224789


Q ss_pred             EEEeccCcccHHHHHhhhccc--ccchHHHHHHHHHHHHhh--------CceeeccCCCCCeEEecCCCeeeE-------
Q 036362           74 QIFEYTGLLNLRKVIKNFLDI--INNPKTAKILRVLSYYHS--------NRCLHGRLNPYQALINLSDYTVKI-------  136 (246)
Q Consensus        74 lv~e~~~~~~L~~~~~~~~~~--~~~~~~~qil~~L~~lH~--------~~i~H~Dikp~Nil~~~~~~~~~~-------  136 (246)
                      +||||+++|+|.+++++....  ....+..|++.||.|||+        +||+||||||+|||++.++ .+++       
T Consensus        78 lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~-~~Kl~DFGl~~  156 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAV  156 (303)
T ss_dssp             EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTS-CEEECCCTTCE
T ss_pred             EEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCC-CeEEEecCccc
Confidence            999999999999999864311  112344499999999996        6999999999999999776 3333       


Q ss_pred             ------------------------------------------EEeehhhHHHHHHhhCCCCCCCCcchHHHHHHHHhhCC
Q 036362          137 ------------------------------------------ARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE  174 (246)
Q Consensus       137 ------------------------------------------~Di~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~  174 (246)
                                                                +|+|||||+++||++|.+||.......          .
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~----------~  226 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ----------L  226 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCC----------C
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccc----------c
Confidence                                                      359999999999999988775322110          0


Q ss_pred             CCcCcCCCCCCcccccc-ccCCCCcchh--hhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHhcC
Q 036362          175 PSEETLPGVTTFFPFIY-CYEESEPKDL--AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH  236 (246)
Q Consensus       175 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l~h  236 (246)
                      +................ .......+..  ..........+.+|+.+||..||++|||+.|++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             chhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            00000000000000000 0000000000  00011233568999999999999999999999763

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.2e-38  Score=252.01  Aligned_cols=204  Identities=11%  Similarity=0.074  Sum_probs=154.0

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC-CceEEe----cCCceEEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY-PLIFRK----ENDKLVYQIF   76 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~----~~~~~~~lv~   76 (246)
                      ++|+++++||+|+||+||+|++.. +  ++.||+|+... ......+.+|++.++.++| +|++.+    ..+...++||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~-~--~~~vAvK~~~~-~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLL-N--NQQVAIKFEPR-RSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETT-T--TEEEEEEEEEC-CTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECC-C--CCEEEEEEEcc-ccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            589999999999999999999987 6  78899998322 3345678889999999865 777666    6678899999


Q ss_pred             eccCcccHHHHHhhhcc----cccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecC----CCeeeEE-----------
Q 036362           77 EYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLS----DYTVKIA-----------  137 (246)
Q Consensus        77 e~~~~~~L~~~~~~~~~----~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~----~~~~~~~-----------  137 (246)
                      ||++ ++|.+++.....    .....++.|++.||.|||++||+||||||+|||++..    ....+++           
T Consensus        81 e~~~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~  159 (293)
T d1csna_          81 DLLG-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  159 (293)
T ss_dssp             ECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             EecC-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence            9996 999998865332    1222234499999999999999999999999999742    1123333           


Q ss_pred             -----------------------------------EeehhhHHHHHHhhCCCCCCCCcchHH---HHHHHHhhCCCCcCc
Q 036362          138 -----------------------------------RLISVGCIFAEMVIQEPLSEDASESRE---RISIFRLMGEPSEET  179 (246)
Q Consensus       138 -----------------------------------Di~slG~i~~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~  179 (246)
                                                         |+||+||++++|++|..||.+......   ...+....       
T Consensus       160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~-------  232 (293)
T d1csna_         160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK-------  232 (293)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH-------
T ss_pred             ccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhcc-------
Confidence                                               499999999999999999986544322   22222210       


Q ss_pred             CCCCCCccccccccCCCCcchhhhhCCCCChHHHHHHHHhhhcCCCCCCCHHHHh
Q 036362          180 LPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL  234 (246)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~s~~e~l  234 (246)
                                       ......+..+++|+++.+++..|+..+|+.||+.+.+.
T Consensus       233 -----------------~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         233 -----------------QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             -----------------HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             -----------------CCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence                             00112333467899999999999999999999877654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.87  E-value=4.5e-23  Score=152.22  Aligned_cols=127  Identities=14%  Similarity=0.153  Sum_probs=92.7

Q ss_pred             ccceeeeCCccceEEEEEEEcccccchhhhhhccccCCCCC-------------------cchhhhhhcccccCCCCceE
Q 036362            4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGV-------------------PISILTKISPLKEMDYPLIF   64 (246)
Q Consensus         4 y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------~~~~~~E~~~l~~l~~~~i~   64 (246)
                      +.+.++||+|+||.||+|.+..    ++.||+|+.......                   .....+|...+..+.|.+++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~----g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~   77 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEK----FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVP   77 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETT----TEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred             chhCCEeeeCcceEEEEEECCC----CCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcc
Confidence            4678999999999999998865    678999972111000                   12234577788888888887


Q ss_pred             EecCCceEEEEEeccCcccHHHHHhhhcccccchHHHHHHHHHHHHhhCceeeccCCCCCeEEecCCCeeeEEEee
Q 036362           65 RKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLI  140 (246)
Q Consensus        65 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~qil~~L~~lH~~~i~H~Dikp~Nil~~~~~~~~~~~Di~  140 (246)
                      ........+++|||+++..+.+    ........+..|++.+|.|||++||+||||||+|||++.+  .++++|+.
T Consensus        78 ~~~~~~~~~lvme~~~~~~~~~----l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~--~~~liDFG  147 (191)
T d1zara2          78 KVYAWEGNAVLMELIDAKELYR----VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE--GIWIIDFP  147 (191)
T ss_dssp             CEEEEETTEEEEECCCCEEGGG----CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT--EEEECCCT
T ss_pred             eEEEecCCEEEEEeeccccccc----hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC--CEEEEECC
Confidence            6622223479999999766533    2234445566699999999999999999999999999954  47888853

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.33  E-value=9.7e-07  Score=66.46  Aligned_cols=81  Identities=16%  Similarity=0.135  Sum_probs=53.6

Q ss_pred             CCccceeeeCCccceEEEEEEEcccccchhhhhhcc-ccCCCCCcchhhhhhcccccCC----CCceEEe-cCCceEEEE
Q 036362            2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA-DIIPDGVPISILTKISPLKEMD----YPLIFRK-ENDKLVYQI   75 (246)
Q Consensus         2 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~-~~~~~~~~~~~~~E~~~l~~l~----~~~i~~~-~~~~~~~lv   75 (246)
                      +.|+..+..+.++.+.||+....+     ..+++|. ..........+.+|...++.+.    -|-++.. ...+..++|
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~~~-----~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv   88 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVGEN-----ENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEECSS-----CEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEEeCC-----CeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEE
Confidence            456666665555567899886433     3456777 3333444556788888876653    4666655 556788999


Q ss_pred             EeccCcccHHHH
Q 036362           76 FEYTGLLNLRKV   87 (246)
Q Consensus        76 ~e~~~~~~L~~~   87 (246)
                      |++++|.++.+.
T Consensus        89 ~~~l~G~~~~~~  100 (263)
T d1j7la_          89 MSEADGVLCSEE  100 (263)
T ss_dssp             EECCSSEEHHHH
T ss_pred             EEeccccccccc
Confidence            999998777543

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.00  E-value=5.3e-06  Score=66.27  Aligned_cols=74  Identities=14%  Similarity=0.187  Sum_probs=44.2

Q ss_pred             eeeeCCccceEEEEEEEcccccchhhhhhccc-----cCC---CCCcchhhhhhcccccCC--CCc-eEEe--cCCceEE
Q 036362            7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKAD-----IIP---DGVPISILTKISPLKEMD--YPL-IFRK--ENDKLVY   73 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~-----~~~---~~~~~~~~~E~~~l~~l~--~~~-i~~~--~~~~~~~   73 (246)
                      .+.||.|....||++.... +  ++.+++|..     ...   +....+...|...|+.+.  .|. +.++  .+....+
T Consensus        31 ~~eig~G~~N~vfrV~~~~-~--~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~  107 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQE-H--DRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAV  107 (392)
T ss_dssp             EEECCSSSSEEEEEEEC-------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETTTTE
T ss_pred             EEEeCCCceEeEEEEEeCC-C--CeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCCCCE
Confidence            4578999999999998755 4  556777751     111   223345667888887663  222 2222  3344567


Q ss_pred             EEEeccCccc
Q 036362           74 QIFEYTGLLN   83 (246)
Q Consensus        74 lv~e~~~~~~   83 (246)
                      +|||++++..
T Consensus       108 lvmE~L~~~~  117 (392)
T d2pula1         108 TVMEDLSHLK  117 (392)
T ss_dssp             EEECCCTTSE
T ss_pred             EEEeccCCcc
Confidence            8999998644

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.83  E-value=1.8e-05  Score=58.94  Aligned_cols=70  Identities=9%  Similarity=0.069  Sum_probs=47.2

Q ss_pred             eeCCccc-eEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCC-----CceEEe-cCCceEEEEEeccCc
Q 036362            9 LIGRGKY-GSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY-----PLIFRK-ENDKLVYQIFEYTGL   81 (246)
Q Consensus         9 ~lg~G~~-g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~~-~~~~~~~lv~e~~~~   81 (246)
                      .+..|.. +.||+.....    +..+++|..  .......+..|...++.+..     |-++.. .+.+..++||++++|
T Consensus        17 ~~~~G~s~~~v~r~~~~~----~~~~vlK~~--~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQG----RPVLFVKTD--LSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEECTT----SCCEEEEEE--CSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEeCC----CCEEEEEeC--CccCHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            4555554 6789887654    556778873  23345567888888877643     334433 566788999999987


Q ss_pred             ccH
Q 036362           82 LNL   84 (246)
Q Consensus        82 ~~L   84 (246)
                      .++
T Consensus        91 ~~~   93 (255)
T d1nd4a_          91 QDL   93 (255)
T ss_dssp             EET
T ss_pred             ccc
Confidence            665

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.00076  Score=51.93  Aligned_cols=64  Identities=9%  Similarity=0.072  Sum_probs=41.7

Q ss_pred             eEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCCCCce-----EEe------cCCceEEEEEeccCccc
Q 036362           16 GSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLI-----FRK------ENDKLVYQIFEYTGLLN   83 (246)
Q Consensus        16 g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~------~~~~~~~lv~e~~~~~~   83 (246)
                      -.||+++..+    +..+++|+.........++..|...+..|...++     +..      ...+..+.++++++|..
T Consensus        36 N~vy~v~~~d----g~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDED----RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTT----CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCC----CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            4799888765    7789999843333345678888888777642222     111      33567888999988543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.06  E-value=0.018  Score=43.51  Aligned_cols=45  Identities=9%  Similarity=-0.045  Sum_probs=26.4

Q ss_pred             eeCCccceEEEEEEEcccccchhhhhhccccCCCCCcchhhhhhcccccCC
Q 036362            9 LIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMD   59 (246)
Q Consensus         9 ~lg~G~~g~V~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~   59 (246)
                      .|..|---+.|+.+...    + .+++|+.... .....+..|+..+..+.
T Consensus        25 ~i~~G~~N~ny~v~t~~----g-~yVLri~~~~-~~~~~l~~~~~~l~~L~   69 (316)
T d2ppqa1          25 GIAEGVENSNFLLHTTK----D-PLILTLYEKR-VEKNDLPFFLGLMQHLA   69 (316)
T ss_dssp             EECC---EEEEEEEESS----C-CEEEEEECC----CCHHHHHHHHHHHHH
T ss_pred             cCCCCcccCeEEEEECC----C-cEEEEEcCCC-CCHHHHHHHHHHHHhhh
Confidence            45567667889887654    3 5788884322 24566777887777764

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.88  E-value=0.012  Score=46.24  Aligned_cols=74  Identities=15%  Similarity=0.161  Sum_probs=46.6

Q ss_pred             eeeeCCccceEEEEEEEcccc----cchhhhhhccccCCCCCcchhhhhhcccccCCC----CceEEecCCceEEEEEec
Q 036362            7 VELIGRGKYGSFYKCEEDVAE----NAYQTVLLKADIIPDGVPISILTKISPLKEMDY----PLIFRKENDKLVYQIFEY   78 (246)
Q Consensus         7 ~~~lg~G~~g~V~~~~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~lv~e~   78 (246)
                      ++.|+.|-.-.+|++......    ...+.|++++... ........+|..+++.+.-    |.+.-...+   .+|++|
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~---g~I~ef  122 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSERHLGPKLYGIFSG---GRLEEY  122 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT---EEEECC
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC---ceEEEE
Confidence            457888999999999876411    1134566776442 3334556788888888753    333333222   578999


Q ss_pred             cCcccH
Q 036362           79 TGLLNL   84 (246)
Q Consensus        79 ~~~~~L   84 (246)
                      ++|.++
T Consensus       123 i~g~~l  128 (395)
T d1nw1a_         123 IPSRPL  128 (395)
T ss_dssp             CCEEEC
T ss_pred             eccccC
Confidence            986554