Citrus Sinensis ID: 036439

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
LTHPFPLASCLGYRMASFLHLFHIFFLISTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNFNFSATP
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcEEcccccccEEEEEEEcccccEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEEEEEEEEccccccccccccccccccEEEcccccccccHHHHHHccccccccEEEEcccccccccccEEEEccccccccccccccccEEEEEcccccccccccEEEEEEEcccccccEEEEcccccEEEcccEEEEEEEccccccccEEEEcccEEEcEEEEEEEcccEEEEEccccccccccccccccccc
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEccccccEEEEEEccccccccEEEEEEccccEEEEEcccccccccccccccccccHHHccccccccccccccccccccccEEccccccccccccccEEEEEEEEEcccccccccccccccEEEEEEHcccccccccHHHHHHHccccccEEEEcccccccccccEEEEccccccccccccccccccEcccEEcccccEEEEEcEEEEEccccEEEEEcccccEEEEcccEEEEEEEEcccccccEEEEEcHHHHHcEEEEEcccccccccccccccccccccccccccc
lthpfplasclgyrmaSFLHLFHIFFLISTSfflvtqskppqrtafnprtafnpnklvlpiqkdqaTHLFITNIhkrnplkqvpfvVHLNGQFLWVACEQSYlsstyhaplchstqcarantpychtcnstprpgchnntcglmatnpmTHQAAMAELAQDVLSIqstkgskpgplvrvpRFLFACIAGlghapislpnqlashfgfppkfalclpssasnvpngaiffgdgpylmlpgidissqlrftpltispegqyYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAfvnggvrprssiiiGSHQLQDNLVQFALAGsrlgfsssllfrrtscsnfnfsatp
LTHPFPLASCLGYRMASFLHLFHIFFLISTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSsllfrrtscsnfnfsatp
LTHPFPLASCLGYRMASflhlfhiffliSTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFalagsrlgfsssllfrRTSCSNFNFSATP
****FPLASCLGYRMASFLHLFHIFFLISTSFFLVTQ***********RTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMT*******L***V************PLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNF******
*THPFP*ASCLGYRMASFLHLFHIFFLISTSFFLVT**********************LPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARAN*************GCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSA****NGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNFNFS***
LTHPFPLASCLGYRMASFLHLFHIFFLISTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNFNFSATP
LTHPFPLASCLGYRMASFLHLFHIFFLISTSFFLVTQSKPPQRTAFN*RTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNFNF****
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LTHPFPLASCLGYRMASFLHLFHIFFLISTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFACIAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNKQNVKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNFNFSATP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query350 2.2.26 [Sep-21-2011]
P13917427 Basic 7S globulin OS=Glyc yes no 0.737 0.604 0.476 1e-64
Q8RVH5433 Basic 7S globulin 2 OS=Gl no no 0.665 0.538 0.503 2e-63
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2 Back     alignment and function desciption
 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 172/294 (58%), Gaps = 36/294 (12%)

Query: 15  MASFLHLFHIFFLISTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPIQKDQATHLFITNI 74
           MAS LH F    L  +  F ++ S  P +           N +VLP+Q D +T L   N+
Sbjct: 1   MASILHYFLALSLSCSFLFFLSDSVTPTKPI---------NLVVLPVQNDGSTGLHWANL 51

Query: 75  HKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTPRP 134
            KR PL QVP +V LNG  LWV CEQ Y S TY AP CHSTQC+RANT  C +C +  RP
Sbjct: 52  QKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRP 111

Query: 135 GCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGS--KPGPLVRVPRFLFAC------ 186
           GCH NTCGLM+TNP+T Q  + EL +DVL+I +T+GS  + GPLV VP+FLF+C      
Sbjct: 112 GCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 171

Query: 187 ----------IAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLM 236
                     +AGLGHAPISLPNQLASHFG   +F  CL  S      GAI FGD P  M
Sbjct: 172 QKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCL--SRYPTSKGAIIFGDAPNNM 229

Query: 237 --LPGIDISSQLRFTPLTISPEGQYYITLTSIRINNK-----QNVKWTIIGANS 283
                 DI   L FTPLTI+ +G+Y + + SIRIN         +  TI+G+ S
Sbjct: 230 RQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTS 283
Seed storage protein. Has a protein kinase activity. Binds leginsulin.
Glycine max (taxid: 3847)
>sp|Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
359487782 620 PREDICTED: basic 7S globulin-like [Vitis 0.745 0.420 0.5 3e-69
147821120439 hypothetical protein VITISV_030194 [Viti 0.72 0.574 0.509 8e-69
357512051437 Basic 7S globulin [Medicago truncatula] 0.697 0.558 0.498 6e-65
11191819 452 conglutin gamma [Lupinus albus] 0.728 0.564 0.477 1e-64
662366449 conglutin gamma [Lupinus angustifolius] 0.708 0.552 0.485 2e-63
1401240427 7S seed globulin precursor [Glycine max] 0.737 0.604 0.476 5e-63
356505878427 PREDICTED: basic 7S globulin [Glycine ma 0.737 0.604 0.476 6e-63
18543427 unnamed protein product [Glycine max] 0.737 0.604 0.472 3e-62
351727625433 basic 7S globulin 2 precursor [Glycine m 0.665 0.538 0.503 1e-61
330689364403 Chain A, Crystal Structure Of Basic 7s G 0.648 0.563 0.511 5e-61
>gi|359487782|ref|XP_002280966.2| PREDICTED: basic 7S globulin-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 143/286 (50%), Positives = 180/286 (62%), Gaps = 25/286 (8%)

Query: 2   THPFPLASCLGYRMASFLHLFHIFFLISTSFFLVTQSKPPQRTAFNPRTAFNPNKLVLPI 61
           T PF L       MA  LH   +FF +     +    +PP     N   +  PN LVL +
Sbjct: 173 TAPFSLLRA----MAPSLHCLPVFFALI--ILVAADQQPPTTLLTNDSVSSRPNALVLLV 226

Query: 62  QKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARAN 121
            K++AT+L + +I KR PLK VP V+ +NG+ LWV CE +YLSSTY+AP CHSTQC+RAN
Sbjct: 227 SKNEATNLHVVDIQKRTPLKPVPLVLDVNGRSLWVDCESNYLSSTYNAPQCHSTQCSRAN 286

Query: 122 TPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPR 181
              C TC++  RPGCHNNTCGL A NP++ + A  ELAQDVLSI ST GS  G LV +P+
Sbjct: 287 LHDCRTCSAQTRPGCHNNTCGLNAANPISGETAFGELAQDVLSIPSTDGSSLGQLVTIPQ 346

Query: 182 FLFAC----------------IAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNG 225
           FLFAC                + GLGH  I+LP QLASHFGF  KFALCL S  +   +G
Sbjct: 347 FLFACAPSSLAQKGFPPAVQGVVGLGHTSIALPTQLASHFGFQQKFALCLTSPLN---HG 403

Query: 226 AIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYYITLTSIRINNK 271
            +F G+ PY + PGID+S  L  TPL+IS EG+Y+I +TSIRIN +
Sbjct: 404 VLFLGEAPYRLHPGIDVSHPLGSTPLSISREGEYFIQVTSIRINER 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147821120|emb|CAN68737.1| hypothetical protein VITISV_030194 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357512051|ref|XP_003626314.1| Basic 7S globulin [Medicago truncatula] gi|87240526|gb|ABD32384.1| Peptidase A1, pepsin [Medicago truncatula] gi|355501329|gb|AES82532.1| Basic 7S globulin [Medicago truncatula] Back     alignment and taxonomy information
>gi|11191819|emb|CAC16394.1| conglutin gamma [Lupinus albus] Back     alignment and taxonomy information
>gi|662366|gb|AAB53771.1| conglutin gamma [Lupinus angustifolius] gi|666056|emb|CAA46552.1| conglutin gamma [Lupinus angustifolius] gi|328684579|gb|AEB33719.1| conglutin gamma 1 [Lupinus angustifolius] Back     alignment and taxonomy information
>gi|1401240|gb|AAB03390.1| 7S seed globulin precursor [Glycine max] Back     alignment and taxonomy information
>gi|356505878|ref|XP_003521716.1| PREDICTED: basic 7S globulin [Glycine max] gi|14549156|sp|P13917.2|7SB1_SOYBN RecName: Full=Basic 7S globulin; AltName: Full=SBg7S; Short=Bg; Contains: RecName: Full=Basic 7S globulin high kDa subunit; Contains: RecName: Full=Basic 7S globulin low kDa subunit; Flags: Precursor gi|434061|dbj|BAA03681.1| basic 7S globulin [Glycine max] Back     alignment and taxonomy information
>gi|18543|emb|CAA34489.1| unnamed protein product [Glycine max] Back     alignment and taxonomy information
>gi|351727625|ref|NP_001237167.1| basic 7S globulin 2 precursor [Glycine max] gi|51316037|sp|Q8RVH5.1|7SBG2_SOYBN RecName: Full=Basic 7S globulin 2; AltName: Full=SBg7S; Short=Bg; Contains: RecName: Full=Basic 7S globulin 2 high kDa subunit; Contains: RecName: Full=Basic 7S globulin 2 low kDa subunit; Flags: Precursor gi|20302594|dbj|BAB91077.1| basic 7S globulin isoform [Glycine max] Back     alignment and taxonomy information
>gi|330689364|pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean gi|330689365|pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean gi|330689366|pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean gi|330689367|pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query350
TAIR|locus:2014475433 AT1G03220 [Arabidopsis thalian 0.574 0.464 0.463 3.7e-64
TAIR|locus:2014465434 AT1G03230 [Arabidopsis thalian 0.568 0.458 0.45 3.7e-62
TAIR|locus:2179614391 AT5G19100 [Arabidopsis thalian 0.588 0.526 0.304 2.1e-24
TAIR|locus:2182182405 AT5G19110 [Arabidopsis thalian 0.565 0.488 0.264 1e-21
TAIR|locus:2166061406 AT5G48430 [Arabidopsis thalian 0.597 0.514 0.307 5.6e-21
TAIR|locus:2182187386 AT5G19120 [Arabidopsis thalian 0.597 0.541 0.279 3.2e-16
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.6 0.471 0.260 0.00019
TAIR|locus:2096139425 AT3G54400 [Arabidopsis thalian 0.545 0.449 0.255 0.0005
TAIR|locus:2043245442 AT2G39710 [Arabidopsis thalian 0.5 0.395 0.256 0.00054
TAIR|locus:2024306449 AT1G09750 [Arabidopsis thalian 0.402 0.314 0.295 0.0007
TAIR|locus:2014475 AT1G03220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 484 (175.4 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
 Identities = 103/222 (46%), Positives = 134/222 (60%)

Query:    49 RTAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYH 108
             +T F P  L+LP+ KDQ+T  + T I++R PL     V  L G+ LWV C++ Y+SSTY 
Sbjct:    23 QTPFRPKALLLPVTKDQSTLQYTTVINQRTPLVPASVVFDLGGRELWVDCDKGYVSSTYQ 82

Query:   109 APLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQST 168
             +P C+S  C+RA +  C TC S PRPGC NNTCG +  N +T  A   E A DV+SIQST
Sbjct:    83 SPRCNSAVCSRAGSTSCGTCFSPPRPGCSNNTCGGIPDNTVTGTATSGEFALDVVSIQST 142

Query:   169 KGSKPGPLVRVPRFLFAC---------------IAGLGHAPISLPNQLASHFGFPPKFAL 213
              GS PG +V++P  +F C               +AG+G   I LP+Q A+ F F  KFA+
Sbjct:   143 NGSNPGRVVKIPNLIFDCGATFLLKGLAKGTVGMAGMGRHNIGLPSQFAAAFSFHRKFAV 202

Query:   214 CLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISP 255
             CL S       G  FFG+GPY+ LPGI ISS L+ TPL I+P
Sbjct:   203 CLTSG-----KGVAFFGNGPYVFLPGIQISS-LQTTPLLINP 238
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2014465 AT1G03230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179614 AT5G19100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182182 AT5G19110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166061 AT5G48430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182187 AT5G19120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096139 AT3G54400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043245 AT2G39710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024306 AT1G09750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 3e-71
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 5e-25
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-22
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 2e-09
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 3e-09
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 5e-08
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 2e-04
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
 Score =  225 bits (576), Expect = 3e-71
 Identities = 97/218 (44%), Positives = 120/218 (55%), Gaps = 24/218 (11%)

Query: 75  HKRNPLKQ-VPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCH-TCNSTP 132
           +   PLK  VP V+ L G  LW  C+  + SSTY    C S+ C+ AN  +C  TC   P
Sbjct: 1   YTITPLKGAVPLVLDLAGPLLWSTCDAGH-SSTYQTVPCSSSVCSLANRYHCPGTCGGAP 59

Query: 133 RPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFAC------ 186
            PGC NNTC     NP+T + A  +L QDVLS  +T GS P  LV +  F+F+C      
Sbjct: 60  GPGCGNNTCTAHPYNPVTGECATGDLTQDVLSANTTDGSNPL-LVVIFNFVFSCAPSLLL 118

Query: 187 ---------IAGLGHAPISLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPY-LM 236
                    +AGLG +P+SLP QLAS FG   KFALCLPSS      G   FG GPY L 
Sbjct: 119 KGLPPGAQGVAGLGRSPLSLPAQLASAFGVARKFALCLPSSPGG--PGVAIFGGGPYYLF 176

Query: 237 LPGIDISSQLRFTPLTISPE--GQYYITLTSIRINNKQ 272
            P ID+S  L +TPL  +P   G+YYI +TSI +N   
Sbjct: 177 PPPIDLSKSLSYTPLLTNPRKSGEYYIGVTSIAVNGHA 214

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors. This family also contains pepsin-like aspartic proteinases homologous to TAXI-I. Unlike TAXI-I, they have active site aspartates and are functionally active. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 362
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 350
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.66
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.37
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 94.74
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 89.52
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 83.97
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
Probab=100.00  E-value=1.7e-46  Score=367.63  Aligned_cols=254  Identities=53%  Similarity=0.950  Sum_probs=209.1

Q ss_pred             ecCCCCe-EeEEEeCCCCcceEeCCCCCCCCcccCCCCCChhccccCCCCCC-CCCCCCCCCCCCCceeeeEe-cCCCCc
Q 036439           76 KRNPLKQ-VPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCH-TCNSTPRPGCHNNTCGLMAT-NPMTHQ  152 (350)
Q Consensus        76 iGTP~q~-~~vvlDTGSs~lWv~c~~c~~SsTy~~v~C~s~~C~~~~~~~c~-~css~~~~~c~~~~c~~~~~-y~~~g~  152 (350)
                      +|||..+ +.|++||||+++||+|+++ +|+||+.++|++..|+.+.+++|. .|.+.+++.|.++.|.|... |. +++
T Consensus         2 ~~~~~~~~~~~~~DTGS~l~WvqC~~~-~sst~~~~~C~s~~C~~~~~~~~~~~~~~~~~~~c~~~~C~y~~~~y~-~gs   79 (362)
T cd05489           2 TITPLKGAVPLVLDLAGPLLWSTCDAG-HSSTYQTVPCSSSVCSLANRYHCPGTCGGAPGPGCGNNTCTAHPYNPV-TGE   79 (362)
T ss_pred             cccCccCCeeEEEECCCCceeeeCCCC-CcCCCCccCcCChhhccccccCCCccccCCCCCCCCCCcCeeEccccc-cCc
Confidence            6899888 9999999999999999986 577999999999999988877776 35555566798889999654 32 677


Q ss_pred             eEEEEEEEEEEEecccCCCCCCCceeecCeeeEE---------------EEecCCCCCCchhhhccccCCCceeEEecCC
Q 036439          153 AAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFAC---------------IAGLGHAPISLPNQLASHFGFPPKFALCLPS  217 (350)
Q Consensus       153 ~~~G~l~~Dtv~i~~~~~~~~g~~~~v~~~~Fgc---------------IlGLg~~~~Sl~~Ql~~~~~~~~~FS~cL~~  217 (350)
                      .++|.|++|+|+|+..++..+. .+.++++.|||               |||||++++|+++|+....+.+++||+||++
T Consensus        80 ~t~G~l~~Dtl~~~~~~g~~~~-~~~~~~~~FGC~~~~~~~~~~~~~dGIlGLg~~~lSl~sql~~~~~~~~~FS~CL~~  158 (362)
T cd05489          80 CATGDLTQDVLSANTTDGSNPL-LVVIFNFVFSCAPSLLLKGLPPGAQGVAGLGRSPLSLPAQLASAFGVARKFALCLPS  158 (362)
T ss_pred             EeeEEEEEEEEEecccCCCCcc-cceeCCEEEEcCCcccccCCccccccccccCCCccchHHHhhhhcCCCcceEEEeCC
Confidence            9999999999999876543222 24688999999               9999999999999998766667999999997


Q ss_pred             CCCCCCCceEEEcCCCCCcCC-ccccCCCeeEEecccCC--CccEEEEEeEEEEcCe-----------------------
Q 036439          218 SASNVPNGAIFFGDGPYLMLP-GIDISSQLRFTPLTISP--EGQYYITLTSIRINNK-----------------------  271 (350)
Q Consensus       218 ~~~~~~~G~l~fGg~~~~~~p-~~~~~g~l~ytPl~~~~--~~~y~i~l~~I~V~g~-----------------------  271 (350)
                      ..  ..+|+|+||+.+..+.+ +.+.++.++||||+.++  +.+|+|+|++|+||++                       
T Consensus       159 ~~--~~~g~l~fG~~~~~~~~~~~~~~~~~~~tPl~~~~~~~~~Y~v~l~~IsVg~~~l~~~~~~~~~~~~~~~g~iiDS  236 (362)
T cd05489         159 SP--GGPGVAIFGGGPYYLFPPPIDLSKSLSYTPLLTNPRKSGEYYIGVTSIAVNGHAVPLNPTLSANDRLGPGGVKLST  236 (362)
T ss_pred             CC--CCCeeEEECCCchhcccccccccCCccccccccCCCCCCceEEEEEEEEECCEECCCCchhccccccCCCcEEEec
Confidence            64  45899999998753211 01234789999999874  3799999999999865                       


Q ss_pred             -------------------------------------------------------------e--ceEEEEccCccEEEeC
Q 036439          272 -------------------------------------------------------------Q--NVKWTIIGANSMVQAR  288 (350)
Q Consensus       272 -------------------------------------------------------------~--g~~~~i~g~ny~v~~~  288 (350)
                                                                                   +  |++|+|+++||++++.
T Consensus       237 GTs~t~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~it~~f~g~g~~~~l~~~ny~~~~~  316 (362)
T cd05489         237 VVPYTVLRSDIYRAFTQAFAKATARIPRVPAAAVFPELCYPASALGNTRLGYAVPAIDLVLDGGGVNWTIFGANSMVQVK  316 (362)
T ss_pred             CCceEEECHHHHHHHHHHHHHHhcccCcCCCCCCCcCccccCCCcCCcccccccceEEEEEeCCCeEEEEcCCceEEEcC
Confidence                                                                         2  4788899999999988


Q ss_pred             CCceEEEEEeCCCCCCCceEEcHHHhcceEEEEeCCCCEEEeeecC
Q 036439          289 SGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSL  334 (350)
Q Consensus       289 ~~~~Clg~~~~~~~~~~~~ILG~~~l~~~~vvFD~~~~rIGFa~sl  334 (350)
                      ++..||||++++..+.+.||||++|||++|++||++++|||||++|
T Consensus       317 ~~~~Cl~f~~~~~~~~~~~IlG~~~~~~~~vvyD~~~~riGfa~~~  362 (362)
T cd05489         317 GGVACLAFVDGGSEPRPAVVIGGHQMEDNLLVFDLEKSRLGFSSSL  362 (362)
T ss_pred             CCcEEEEEeeCCCCCCceEEEeeheecceEEEEECCCCEeecccCC
Confidence            7789999998764335689999999999999999999999999875

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 6e-64
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 2e-09
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 4e-53
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 5e-15
3vla_A413 Crystal Structure Of Edgp Length = 413 4e-53
3vla_A413 Crystal Structure Of Edgp Length = 413 5e-15
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 2e-15
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 7e-05
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 1e-10
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 6e-04
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 2e-10
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 6e-04
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure 
Iteration: 1

 Score =  241 bits (614), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/254 (51%), Positives = 158/254 (62%), Gaps = 27/254 (10%)
Query: 55  NKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHS 114
           N +VLP+Q D +T L   N+ KR PL QVP +V LNG  LWV CEQ Y S TY AP CHS
Sbjct: 8   NLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHS 67
Query: 115 TQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGS--K 172
           TQC+RANT  C +C +  RPGCH NTCGLM+TNP+T Q  + EL +DVL+I +T+GS  +
Sbjct: 68  TQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQ 127
Query: 173 PGPLVRVPRFLFAC----------------IAGLGHAPISLPNQLASHFGFPPKFALCLP 216
            GPLV VP+FLF+C                +AGLGHAPISLPNQLASHFG   +F  CL 
Sbjct: 128 LGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCL- 186
Query: 217 SSASNVPNGAIFFGDGPYLM--LPGIDISSQLRFTPLTISPEGQYYITLTSIRINNK--- 271
            S      GAI FGD P  M      DI   L FTPLTI+ +G+Y + + SIRIN     
Sbjct: 187 -SRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVF 245
Query: 272 --QNVKWTIIGANS 283
               +  TI+G+ S
Sbjct: 246 PLNKISSTIVGSTS 259
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query350
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 7e-48
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 4e-17
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-47
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 8e-14
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-33
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-12
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  165 bits (419), Expect = 7e-48
 Identities = 103/251 (41%), Positives = 148/251 (58%), Gaps = 30/251 (11%)

Query: 50  TAFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHA 109
            +F P+ LV+P++KD +T  ++T I++R PL     VV L G+FLWV C+Q+Y+SSTY  
Sbjct: 2   PSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRP 61

Query: 110 PLCHSTQCARANTPYCHTCNSTPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTK 169
             C ++QC+ + +  C  C + PRPGC+NNTCG+   NP+ + A   E+A+DV+S++ST 
Sbjct: 62  VRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTD 121

Query: 170 GSKPGPLVRVPRFLFAC---------------IAGLGHAPISLPNQLASHFGFPPKFALC 214
           GS  G +V VPRF+F+C               +AGLG   I+LP+Q AS F F  KFA+C
Sbjct: 122 GSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMC 181

Query: 215 LPSSASNVPNGAIFFGDGPYLMLPGIDI-SSQLRFTPLTISPEGQ------------YYI 261
           L  S S+  N  I FG+ PY  LP I +    L +TPL  +P               Y+I
Sbjct: 182 LSGSTSS--NSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFI 239

Query: 262 TLTSIRINNKQ 272
            + SI+IN+K 
Sbjct: 240 GVKSIKINSKI 250
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.97
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.91
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.78
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=8.6e-65  Score=503.74  Aligned_cols=296  Identities=50%  Similarity=0.946  Sum_probs=261.1

Q ss_pred             CCCCCceEeeeeeCCCCceEEEEEEecCCCCeEeEEEeCCCCcceEeCCCCCCCCcccCCCCCChhccccCCCCCCCCCC
Q 036439           51 AFNPNKLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNS  130 (350)
Q Consensus        51 ~~~p~~~~~Pi~~d~~~~~Y~~~I~iGTP~q~~~vvlDTGSs~lWv~c~~c~~SsTy~~v~C~s~~C~~~~~~~c~~css  130 (350)
                      +++|+++++||++|..+.+|+++|.||||||++.|+|||||+++||+|++|++|+||++++|.+..|..+++++|..|.+
T Consensus         3 ~~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s   82 (413)
T 3vla_A            3 SFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFN   82 (413)
T ss_dssp             CCCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSS
T ss_pred             CCCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCccccc
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999988877


Q ss_pred             CCCCCCCCCceeeeEecCCCCceEEEEEEEEEEEecccCCCCCCCceeecCeeeEE---------------EEecCCCCC
Q 036439          131 TPRPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFAC---------------IAGLGHAPI  195 (350)
Q Consensus       131 ~~~~~c~~~~c~~~~~y~~~g~~~~G~l~~Dtv~i~~~~~~~~g~~~~v~~~~Fgc---------------IlGLg~~~~  195 (350)
                      +++++|.++.|.|.+.|+.+++.++|+|++|+|+|+..++.+++..+.++++.|||               |||||++++
T Consensus        83 ~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~l  162 (413)
T 3vla_A           83 GPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRI  162 (413)
T ss_dssp             CCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSS
T ss_pred             CCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCc
Confidence            77778988899999998547889999999999999976655444456888999999               999999999


Q ss_pred             CchhhhccccCCCceeEEecCCCCCCCCCceEEEcCCCCCcCCccccCCC-eeEEecccCC------------CccEEEE
Q 036439          196 SLPNQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQ-LRFTPLTISP------------EGQYYIT  262 (350)
Q Consensus       196 Sl~~Ql~~~~~~~~~FS~cL~~~~~~~~~G~l~fGg~~~~~~p~~~~~g~-l~ytPl~~~~------------~~~y~i~  262 (350)
                      |+++|+..+..++++||+||++..  +.+|+|+||+.|..+.|+.+++++ +.||||+.++            +.+|+|+
T Consensus       163 Sl~sql~~~~~i~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~  240 (413)
T 3vla_A          163 ALPSQFASAFSFKRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG  240 (413)
T ss_dssp             SHHHHHHHHHTCCSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred             chHHHHhhhcCCCceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence            999999887666899999999853  568999999998655455568888 9999999874            1699999


Q ss_pred             EeEEEEcCe-----------------------------------------------------------------------
Q 036439          263 LTSIRINNK-----------------------------------------------------------------------  271 (350)
Q Consensus       263 l~~I~V~g~-----------------------------------------------------------------------  271 (350)
                      |++|+||++                                                                       
T Consensus       241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~  320 (413)
T 3vla_A          241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILS  320 (413)
T ss_dssp             CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCE
T ss_pred             EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccc
Confidence            999999875                                                                       


Q ss_pred             --------------ec--eEEEEccCccEEEeCCCceEEEEEeCCCCCCCceEEcHHHhcceEEEEeCCCCEEEeeecCC
Q 036439          272 --------------QN--VKWTIIGANSMVQARSGVTCLAFVNGGVRPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLL  335 (350)
Q Consensus       272 --------------~g--~~~~i~g~ny~v~~~~~~~Clg~~~~~~~~~~~~ILG~~~l~~~~vvFD~~~~rIGFa~sl~  335 (350)
                                    +|  +.|+|+++||+++++++..|+||+..+...++.||||++|||++|+|||++++|||||++++
T Consensus       321 ~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~  400 (413)
T 3vla_A          321 TRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLL  400 (413)
T ss_dssp             ETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEGG
T ss_pred             cccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEecc
Confidence                          12  56778888999988777899999876532346899999999999999999999999999999


Q ss_pred             CcCCCCCCCcCCC
Q 036439          336 FRRTSCSNFNFSA  348 (350)
Q Consensus       336 ~~~~~Cs~~~~~~  348 (350)
                      .|+++|++|+|++
T Consensus       401 ~~~~~c~~~~~~~  413 (413)
T 3vla_A          401 GSRTTCANFNFTS  413 (413)
T ss_dssp             GGTCCGGGSBCCC
T ss_pred             cCcccccCcCCCC
Confidence            9999999999975
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 350
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-21
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-09
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 5e-04
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 91.6 bits (226), Expect = 2e-21
 Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 31/232 (13%)

Query: 57  LVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQ 116
           ++ P+ KD AT L+    H    L     V+ + G  +W  C+     +      C S  
Sbjct: 3   VLAPVTKDPATSLYTIPFHDGASL-----VLDVAGPLVWSTCDGGQPPAEIP---CSSPT 54

Query: 117 CARANTPYCHTCNSTP-RPGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGP 175
           C  AN      C +       H+  C     NP++   A   L+       +T GSKP  
Sbjct: 55  CLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVS 114

Query: 176 LVRVPRFLFAC--------------IAGLGHAPISLPNQLASHFGFPPKFALCLPSSASN 221
            V V                     +AGL ++ ++LP Q+AS      +F LCLP+    
Sbjct: 115 KVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPG 174

Query: 222 VPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISPEGQYY-ITLTSIRINNKQ 272
           V      FG GP    P    +  + +TPL        + I+  SI + + +
Sbjct: 175 V----AIFGGGPV---PWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTR 219
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query350
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=100.00  E-value=4.7e-42  Score=331.60  Aligned_cols=270  Identities=27%  Similarity=0.478  Sum_probs=206.2

Q ss_pred             ceEeeeeeCCCCceEEEEEEecCCCCeEeEEEeCCCCcceEeCCCCCCCCcccCCCCCChhccccCCCCCCCCCCCC--C
Q 036439           56 KLVLPIQKDQATHLFITNIHKRNPLKQVPFVVHLNGQFLWVACEQSYLSSTYHAPLCHSTQCARANTPYCHTCNSTP--R  133 (350)
Q Consensus        56 ~~~~Pi~~d~~~~~Y~~~I~iGTP~q~~~vvlDTGSs~lWv~c~~c~~SsTy~~v~C~s~~C~~~~~~~c~~css~~--~  133 (350)
                      ++++||++|..+.+|+++|.||||     |+|||||+++||+|+.|..   ....+|.+..|+....+.+..|....  .
T Consensus         2 ~~~~pi~~~~~~~~Y~~~i~iGtp-----liiDTGSs~~Wvpc~~c~~---~~~~~~~~~~c~~~~~~~~~~c~~~~~~~   73 (381)
T d1t6ex_           2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQP---PAEIPCSSPTCLLANAYPAPGCPAPSCGS   73 (381)
T ss_dssp             CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCC---CCCCBTTSHHHHHHHSSCCTTCCCCCC--
T ss_pred             CEEEeecccCCCCeEEEEEEcCCc-----eEEECCCCceeeccCCCCC---CcccccCCchhhhccCcCCCCCCCccccC
Confidence            588999999999999999999998     9999999999999998743   33578999999877666555554321  1


Q ss_pred             CCCCCCceeeeEecCCCCceEEEEEEEEEEEecccCCCCCCCceeecCeeeEE---------------EEecCCCCCCch
Q 036439          134 PGCHNNTCGLMATNPMTHQAAMAELAQDVLSIQSTKGSKPGPLVRVPRFLFAC---------------IAGLGHAPISLP  198 (350)
Q Consensus       134 ~~c~~~~c~~~~~y~~~g~~~~G~l~~Dtv~i~~~~~~~~g~~~~v~~~~Fgc---------------IlGLg~~~~Sl~  198 (350)
                      ..+.+..|.|.+.|. +|+.++|.+++|+|++++.....+... ...++.++|               |+|||+...+++
T Consensus        74 ~~~~~~~~~~~~~Y~-~Gs~~~G~~~~D~v~ig~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~  151 (381)
T d1t6ex_          74 DKHDKPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGSKPVSK-VNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALP  151 (381)
T ss_dssp             ----CBCEECCBCTT-TCCBCCEEEEEEEEEEEEESSSSEEEE-EEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHH
T ss_pred             CCCCCCCceeEEEeC-CCCEEEEEEEEEEEEecccccccceee-EEeeeeeeccccccccccccCcceeeecCCCCcchH
Confidence            123445577888885 777889999999999998654332111 122345555               999999999999


Q ss_pred             hhhccccCCCceeEEecCCCCCCCCCceEEEcCCCCCcCCccccCCCeeEEecccCC-CccEEEEEeEEEEcCe------
Q 036439          199 NQLASHFGFPPKFALCLPSSASNVPNGAIFFGDGPYLMLPGIDISSQLRFTPLTISP-EGQYYITLTSIRINNK------  271 (350)
Q Consensus       199 ~Ql~~~~~~~~~FS~cL~~~~~~~~~G~l~fGg~~~~~~p~~~~~g~l~ytPl~~~~-~~~y~i~l~~I~V~g~------  271 (350)
                      +|+.....+++.|++||.+..  ...+.+.+|+.+.     .++.+++.|+|++.+. ..+|.|.+++|+|+++      
T Consensus       152 ~ql~~~~~~~~~fsl~l~~~~--~~~~~~~~g~~~~-----~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~~  224 (381)
T d1t6ex_         152 AQVASAQKVANRFLLCLPTGG--PGVAIFGGGPVPW-----PQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPE  224 (381)
T ss_dssp             HHHHHHHTCCSEEEEECCSSS--CEEEEESCCSCSC-----HHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCT
T ss_pred             HHHhhhcCcceEEEeecCCCc--ccceEeecccccc-----cccCCceEEEeeeccCCCceeEEEEEEEeeCCeeeccCc
Confidence            999876667799999998764  2334555555553     5678999999998764 3689999999999986      


Q ss_pred             --------------------------------------------------------------------------------
Q 036439          272 --------------------------------------------------------------------------------  271 (350)
Q Consensus       272 --------------------------------------------------------------------------------  271 (350)
                                                                                                      
T Consensus       225 ~~~~~~~~i~DTGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f  304 (381)
T d1t6ex_         225 GALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGL  304 (381)
T ss_dssp             TCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEE
T ss_pred             ccccCcceEEecCCceEECCHHHHHHHHHHHHHHhcccccccccccccccccCCcceeeccccccccccccccccEEEEE
Confidence                                                                                            


Q ss_pred             -eceEEEEccCccEEEeCCCceEEEEEeCCC-----CCCCceEEcHHHhcceEEEEeCCCCEEEeeecCCCcCCCCCCC
Q 036439          272 -QNVKWTIIGANSMVQARSGVTCLAFVNGGV-----RPRSSIIIGSHQLQDNLVQFALAGSRLGFSSSLLFRRTSCSNF  344 (350)
Q Consensus       272 -~g~~~~i~g~ny~v~~~~~~~Clg~~~~~~-----~~~~~~ILG~~~l~~~~vvFD~~~~rIGFa~sl~~~~~~Cs~~  344 (350)
                       +++.+.+++++|+++..++..|+++++...     ...+.||||+.|||++|+|||++++|||||+  +.++++|++.
T Consensus       305 ~~~~~~~i~~~~y~~~~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~--~~~~~~~~~~  381 (381)
T d1t6ex_         305 DGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSR--LPHFTGCGGL  381 (381)
T ss_dssp             TTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEE--CCTTCCSCC-
T ss_pred             cCCcEEEEChhHeEEEeCCCcEEEEEEecccccCCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEE--CCCCCCCcCC
Confidence             245667778899988877889999876432     1345799999999999999999999999998  5558999863
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure