Citrus Sinensis ID: 036566

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Protein Sequence
MVIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS
Secondary Structure (PSIPRED)
cEEEHHHcccccccccccEEcccccEEEEEEccccccccHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHccccccccHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccEEcHHHHHHHHHHccccHHHHccccccccccEEEEEccccccccEEEEccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHccccEEEEEEccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHcEEccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccccccccEEcccccHHHEEcHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHHHHccccccHHHHHHHcccHEEEEccccccEEcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHcccccEEEEEccccccccEEEEEccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHcccEEEEEcccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccccccccHHccccccccccccccccccccHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MVIVNiylgntsscqsrlytlpcfhniLRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAInwlkkypccfevyfENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNElkrnfgfpdeyIIRIlpkypdmfqlvnysgrkssmeielvswkpeLAVSAVEASAqkqgtepcfscclpstwvKSWEKFkefnatpyispyldtkglgegskeMEKRTIGVVHELLSLTLWKKMSIVKlghfkrefslpEKLNVLLlkhpgifyvsnKYQIYTVLLREayngseliekdplvvVKDKFGELMQEGLHEYNQRHRLMNLekkkkrgmmpvrseksedvrteisqqdvigdklgglfdpeeRKRFYKVLFDDGAS
Flexible Loop (DISEMBL)
MVIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELEsalsrnrrwIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQrlnvvklnelkrnfgfpDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFnatpyispyldTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNgseliekdplvVVKDKFGELMQEGLheynqrhrlmnlekkkkrgmmpvrseksedvrteisqqdvigdklgglfdpeerkRFYKVLFDDGAS
Low Complexity Region (SEG)
MVIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRmmslveeeesvkemqesAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS
Disordered region (IsUnstruct)
*VIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLV************AYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASA*KQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLG******EKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHE*****************************************KLGGLFD****KRFYKVLF*****
Disordered Region (DISOPRED)
****N**LGNTSSCQSRLYTLPCFHNIL*SF*LWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSA***************CCLPSTWVKSWEKFKEFNATPYISPYLDTKGL*E*SKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQE*****************************************************EERKRFYKVLFDD***
Disordered Region (DISEMBL)
MVIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLV**********ESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVS***********EPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKK********************SQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS
Disordered Region (DISPRO)
MVIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEY*******************************************GLFDPEERKRFYKVLFDD***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVIVNIYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	420
224085105	420	predicted protein [Populus trichocarpa]	0.942	0.942	0.783	0.0
225460684	419	PREDICTED: uncharacterized protein LOC10	0.995	0.997	0.745	0.0
255583350	415	conserved hypothetical protein [Ricinus	0.980	0.992	0.740	0.0
147855132	406	hypothetical protein VITISV_044078 [Viti	0.964	0.997	0.719	1e-173
449446419	418	PREDICTED: uncharacterized protein LOC10	0.95	0.954	0.727	1e-169
449497085	418	PREDICTED: uncharacterized protein LOC10	0.95	0.954	0.725	1e-169
15224649	415	ubiquitin carboxyl-terminal hydrolase-li	0.930	0.942	0.718	1e-167
62318721	415	hypothetical protein [Arabidopsis thalia	0.930	0.942	0.716	1e-166
297822869	415	hypothetical protein ARALYDRAFT_902159 [	0.930	0.942	0.713	1e-165
89257625	418	hypothetical protein 31.t00019 [Brassica	0.969	0.973	0.669	1e-156

>gi|224085105|ref|XP_002307494.1| predicted protein [Populus trichocarpa] gi|222856943|gb|EEE94490.1| predicted protein [Populus trichocarpa]

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/397 (78%), Positives = 361/397 (90%), Gaps = 1/397 (0%)

Query: 24  FHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLD 83
           F+ + R+FSLWSMKK P+LESALSRNRRWIVNNQIKNIILR P+Q A VK+LQKKFKTLD
Sbjct: 23  FYYLHRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRYPNQDAPVKFLQKKFKTLD 82

Query: 84  LQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLM 143
           LQGKA+NWLKKYPCCF+VY +N+E++C+L+KRM+ LVEEEESVKE QE  +VERL KLLM
Sbjct: 83  LQGKALNWLKKYPCCFDVYLQNDEYHCKLSKRMLFLVEEEESVKETQEPVFVERLSKLLM 142

Query: 144 MSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPEL 203
           +S N RLNVVKLNELKRN GFPD+Y+IRILPKYPD F+ VN+SGR+SSMEIEL+SW P+L
Sbjct: 143 LSVNHRLNVVKLNELKRNLGFPDDYLIRILPKYPDTFRFVNHSGRRSSMEIELLSWNPDL 202

Query: 204 AVSAVEASAQKQGT-EPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEME 262
           A+SAVE SA+KQG+ +PCFSC LPSTWVKSWE+F EFNATPYISPY+D++GL EGSKEME
Sbjct: 203 AISAVEVSARKQGSSKPCFSCSLPSTWVKSWERFNEFNATPYISPYVDSRGLLEGSKEME 262

Query: 263 KRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVL 322
           KR +G+VHELLSLTLWKKMSIVK+GHFKREF+LPEKLN+LLLKHPGIFYVSNKYQIYTVL
Sbjct: 263 KRIVGLVHELLSLTLWKKMSIVKMGHFKREFNLPEKLNILLLKHPGIFYVSNKYQIYTVL 322

Query: 323 LREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEKSE 382
           LRE YNGSELI+KDPLVVVKDKFGELMQEGLHEYN+R   +NLEK++K+G++ VR EK +
Sbjct: 323 LREGYNGSELIDKDPLVVVKDKFGELMQEGLHEYNRRRYEVNLEKQRKKGIVSVRKEKRK 382

Query: 383 DVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGA 419
           +  TE+++QD  GDKLGGLFDPEERKRFYKVLFDD A
Sbjct: 383 EGSTEMTEQDDSGDKLGGLFDPEERKRFYKVLFDDDA 419

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460684|ref|XP_002266948.1| PREDICTED: uncharacterized protein LOC100253756 [Vitis vinifera]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/420 (74%), Positives = 362/420 (86%), Gaps = 2/420 (0%)

Query: 2   VIVNIYLGNTSSCQSRLYT-LPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKN 60
           ++  I+L N +  + R+Y  LP  +++ R FSLWSMKK P+LES+LSRNRRWIVNNQIKN
Sbjct: 1   MVTKIFLQNLNYWEPRVYPPLPFLYHV-RIFSLWSMKKDPDLESSLSRNRRWIVNNQIKN 59

Query: 61  IILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLV 120
           IILR P QVA VK+LQKKFKTLDLQGKA+NWLKKYPCCF VY E +E+YC+LTKRMMSLV
Sbjct: 60  IILRCPEQVAAVKFLQKKFKTLDLQGKALNWLKKYPCCFNVYLEGDEYYCQLTKRMMSLV 119

Query: 121 EEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMF 180
           EEEESVK+MQE   VERL KLLMMS N RLNV+KLNELKR+FGFPD+Y+IRI+PK+P+MF
Sbjct: 120 EEEESVKDMQEPVLVERLTKLLMMSINHRLNVMKLNELKRSFGFPDDYLIRIVPKHPEMF 179

Query: 181 QLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFN 240
           ++VNYSGR+S+MEIEL+SW P+L +S +E+ A  QG++P FSC LPSTWVKSWE+F EFN
Sbjct: 180 RIVNYSGRRSAMEIELLSWNPDLGISVIESLAHSQGSDPRFSCTLPSTWVKSWERFCEFN 239

Query: 241 ATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLN 300
           ATPYISPYLD   L EGSKEMEKR +G+VHELLSLTLWKK+SIVKLGHF+REF LPEKLN
Sbjct: 240 ATPYISPYLDASHLVEGSKEMEKRIVGLVHELLSLTLWKKLSIVKLGHFRREFGLPEKLN 299

Query: 301 VLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRH 360
           VLLLKHPGIFYVSN+YQIYTVLLRE YNGSELI+KDPLVVVK+KFGELMQEGLHEYN+RH
Sbjct: 300 VLLLKHPGIFYVSNRYQIYTVLLREGYNGSELIDKDPLVVVKEKFGELMQEGLHEYNRRH 359

Query: 361 RLMNLEKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS 420
            LMNLEKKKK+GM+   S K  D  +E+S+QD     LGGL DPEERKRFYKVLFDD AS
Sbjct: 360 HLMNLEKKKKKGMVLESSPKMRDKSSEMSEQDDHESNLGGLLDPEERKRFYKVLFDDAAS 419

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583350|ref|XP_002532436.1| conserved hypothetical protein [Ricinus communis] gi|223527856|gb|EEF29951.1| conserved hypothetical protein [Ricinus communis]

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/412 (74%), Positives = 358/412 (86%)

Query: 6   IYLGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRL 65
           ++L N + C  +  +      + R FSLWSMKK P+LESALSRNRRWIVNNQIKNIILR 
Sbjct: 1   MFLKNLNYCNHKWKSKQSLVYLYRDFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRY 60

Query: 66  PSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEES 125
           P+QV  VK LQKKFKTLDLQG A+NWLKKYPCCFEV  EN+E+ CRLTKRMM L+EEEES
Sbjct: 61  PNQVLPVKCLQKKFKTLDLQGNALNWLKKYPCCFEVCLENDEYCCRLTKRMMFLLEEEES 120

Query: 126 VKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNY 185
           VKEMQE     RL KLLMMS NQRL+VVKLNE KRNFGFPD+Y++RILP++PDMF+L+N+
Sbjct: 121 VKEMQEPVLARRLAKLLMMSMNQRLSVVKLNEFKRNFGFPDDYLLRILPRHPDMFRLINH 180

Query: 186 SGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYI 245
           SGRKSSMEIEL+SW P+LAVSAVE SA+KQG+EPCF+  LPSTWVKSWE+F+EFN+TPYI
Sbjct: 181 SGRKSSMEIELLSWNPDLAVSAVEESAKKQGSEPCFTSLLPSTWVKSWERFREFNSTPYI 240

Query: 246 SPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLK 305
           SPYLD++G+ EGSK+MEKR +G+VHELLSLTLWKK+SI+KLGHF+REF+LPEKLNVLLLK
Sbjct: 241 SPYLDSRGISEGSKDMEKRNVGLVHELLSLTLWKKLSIMKLGHFRREFNLPEKLNVLLLK 300

Query: 306 HPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNL 365
           HP IFYVSNKYQIYTV+LRE YNGSELI+KDPLV+VKDKFGELMQEGLHEYNQRH L NL
Sbjct: 301 HPAIFYVSNKYQIYTVILREGYNGSELIDKDPLVLVKDKFGELMQEGLHEYNQRHHLFNL 360

Query: 366 EKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDD 417
           EKKK++G++  R+ K ++   ++ +QD   DKLGGLF+PEERKRFYKVLFDD
Sbjct: 361 EKKKRKGVVSSRAGKRKEDSIDMPEQDYADDKLGGLFNPEERKRFYKVLFDD 412

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855132|emb|CAN83842.1| hypothetical protein VITISV_044078 [Vitis vinifera]

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/420 (71%), Positives = 349/420 (83%), Gaps = 15/420 (3%)

Query: 2   VIVNIYLGNTSSCQSRLYT-LPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKN 60
           ++  I+L N +  + R+Y  LP  +++ R FSL              RNRRWIVNNQIKN
Sbjct: 1   MVTKIFLQNLNYWEPRVYPPLPFLYHV-RIFSL-------------CRNRRWIVNNQIKN 46

Query: 61  IILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLV 120
           IILR P QVA VK+LQKKFKTLDLQGKA+NWLKKYPCCF VY E +E+YC+LTKRMMSLV
Sbjct: 47  IILRCPEQVAAVKFLQKKFKTLDLQGKALNWLKKYPCCFNVYLEGDEYYCQLTKRMMSLV 106

Query: 121 EEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMF 180
           EEEESVK+MQE   VERL KLLMMS N RLNV+KLNELKR+FGFPD+Y+IRI+PK+P+MF
Sbjct: 107 EEEESVKDMQEPVLVERLTKLLMMSINHRLNVMKLNELKRSFGFPDDYLIRIVPKHPEMF 166

Query: 181 QLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFN 240
           ++VNYSGR+S+MEIEL+SW P+L +S +E+ A  QG++P FSC LPSTWVKSWE+F EFN
Sbjct: 167 RIVNYSGRRSAMEIELLSWNPDLGISVIESLAHSQGSDPRFSCTLPSTWVKSWERFCEFN 226

Query: 241 ATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLN 300
           ATPYISPYLD   L EGSKEMEKR +G+VHELLSLTLWKK+SIVKLGHF+REF LPEKLN
Sbjct: 227 ATPYISPYLDASHLVEGSKEMEKRIVGLVHELLSLTLWKKLSIVKLGHFRREFGLPEKLN 286

Query: 301 VLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRH 360
           VLLLKHPGIFYVSN+YQIYTVLLRE YNGSELI+KDPLVVVK+KFGELMQEGLHEYN+RH
Sbjct: 287 VLLLKHPGIFYVSNRYQIYTVLLREGYNGSELIDKDPLVVVKEKFGELMQEGLHEYNRRH 346

Query: 361 RLMNLEKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS 420
            LMNLEKKKK+GM+   S K  D  +E+S+QD     LGGL DPEERKRFYKVLFDD AS
Sbjct: 347 HLMNLEKKKKKGMVLESSPKMRDKSSEMSEQDDHESNLGGLLDPEERKRFYKVLFDDAAS 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446419|ref|XP_004140969.1| PREDICTED: uncharacterized protein LOC101203802 [Cucumis sativus]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 291/400 (72%), Positives = 346/400 (86%), Gaps = 1/400 (0%)

Query: 22  PC-FHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFK 80
           PC    ILR+FSLWSMKK P+LESALSRNRRWI NNQIKNIILR P Q A VK+LQKKFK
Sbjct: 19  PCPLKYILRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQAAPVKFLQKKFK 78

Query: 81  TLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVK 140
           TLDLQGKA+NWLKKYPCCFEVY +N+EHY RLTKRMM+LVEEEE VK+MQE A V+RL K
Sbjct: 79  TLDLQGKALNWLKKYPCCFEVYLDNDEHYFRLTKRMMALVEEEEVVKDMQEPAIVKRLTK 138

Query: 141 LLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWK 200
           LLMM+ NQRLNVVKL+EL+RNFG PD+++IRI+PK+ D+F++VNY+G+K+SMEIEL+SWK
Sbjct: 139 LLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGKKNSMEIELISWK 198

Query: 201 PELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKE 260
           PELA+S++E+SA K G EP FSC LP+TWV SWEKF EFNA+PY+SPY++  GL +G++E
Sbjct: 199 PELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPYVNPAGLVQGTRE 258

Query: 261 MEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYT 320
           MEKRT+G++HE+LSLTLWKK SI+KLGHF +EF LP KLN LLLKHPGIFYVSNKYQIYT
Sbjct: 259 MEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYT 318

Query: 321 VLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEK 380
           V+LRE YNGSELIEKDPLVVVK+KFGELMQEGLHEYN+RH LMNLEKK+ +GM+  RSEK
Sbjct: 319 VVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKKRMKGMLLGRSEK 378

Query: 381 SEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS 420
           ++    E    +  G+ LGGL +PEERKRFY+ LFDD  +
Sbjct: 379 NKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDDDPT 418

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449497085|ref|XP_004160307.1| PREDICTED: uncharacterized protein LOC101231603 [Cucumis sativus]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 290/400 (72%), Positives = 346/400 (86%), Gaps = 1/400 (0%)

Query: 22  PC-FHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFK 80
           PC    +LR+FSLWSMKK P+LESALSRNRRWI NNQIKNIILR P Q A VK+LQKKFK
Sbjct: 19  PCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQAAPVKFLQKKFK 78

Query: 81  TLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVK 140
           TLDLQGKA+NWLKKYPCCFEVY +N+EHY RLTKRMM+LVEEEE VK+MQE A V+RL K
Sbjct: 79  TLDLQGKALNWLKKYPCCFEVYLDNDEHYFRLTKRMMALVEEEEVVKDMQEPAIVKRLTK 138

Query: 141 LLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWK 200
           LLMM+ NQRLNVVKL+EL+RNFG PD+++IRI+PK+ DMF++VNY+G+K+SMEIEL+SWK
Sbjct: 139 LLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDMFRIVNYTGKKNSMEIELISWK 198

Query: 201 PELAVSAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKE 260
           PELA+S++E+SA K G EP FSC LP+TWV SWEKF EFNA+PY+SPY++  GL +G++E
Sbjct: 199 PELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPYVNPAGLVQGTRE 258

Query: 261 MEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYT 320
           MEKRT+G++HE+LSLTLWKK SI+KLGHF +EF LP KLN LLLKHPGIFYVSNKYQIYT
Sbjct: 259 MEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYT 318

Query: 321 VLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEK 380
           V+LRE YNGSELIE+DPLVVVK+KFGELMQEGLHEYN+RH LMNLEKK+ +GM+  RSEK
Sbjct: 319 VVLREGYNGSELIEEDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKKRMKGMLLGRSEK 378

Query: 381 SEDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDDGAS 420
           ++    E    +  G+ LGGL +PEERKRFY+ LFDD  +
Sbjct: 379 NKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDDDPT 418

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224649|ref|NP_180687.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gi|79323710|ref|NP_001031455.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gi|4432824|gb|AAD20674.1| hypothetical protein [Arabidopsis thaliana] gi|18377712|gb|AAL67006.1| unknown protein [Arabidopsis thaliana] gi|20465407|gb|AAM20128.1| unknown protein [Arabidopsis thaliana] gi|330253428|gb|AEC08522.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gi|330253429|gb|AEC08523.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 284/395 (71%), Positives = 336/395 (85%), Gaps = 4/395 (1%)

Query: 27  ILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQG 86
           ++R FSLWS KK P+LESALSRN+RWIVN+++KNIILR P+QVA++K+LQKKFKTLDLQG
Sbjct: 19  LIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQG 78

Query: 87  KAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSR 146
           KA+NWLKKYPCCF VY EN+E+YCRLTK MM+LVEEEE VK+ QE    +RL KLLM+S 
Sbjct: 79  KALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSV 138

Query: 147 NQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVS 206
           NQRLNVVKLNE KR+FGFPD+Y+IRI+PKY D+F+LVNYSGRKSSMEIEL+ WKPELAVS
Sbjct: 139 NQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVS 198

Query: 207 AVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTI 266
           AVEA+A+K G+EP FSC LPSTW K WE+F EFNA PYISPY D   L EGSKE EKR++
Sbjct: 199 AVEAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSKESEKRSV 258

Query: 267 GVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREA 326
           G+VHELLSLTLWKK+SIVKL HFKREF LPEKLN +LLKHPGIFYV NKYQ++TV+LRE 
Sbjct: 259 GLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREG 318

Query: 327 YNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMP----VRSEKSE 382
           YNGSELI KDPLVVVKDKFGELMQ+GL+EYN R  L NLEKK+++G+      VR +   
Sbjct: 319 YNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVVRKKDRN 378

Query: 383 DVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDD 417
             R ++ +++  GD+ GGLFDPEERKRFY++LF D
Sbjct: 379 HDRDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62318721|dbj|BAD93738.1| hypothetical protein [Arabidopsis thaliana]

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 283/395 (71%), Positives = 336/395 (85%), Gaps = 4/395 (1%)

Query: 27  ILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQG 86
           ++R FSLWS KK P+LESALSRN+RWIVN+++KNIILR P+QVA++K+LQKKFKTLDLQG
Sbjct: 19  LIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQG 78

Query: 87  KAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSR 146
           KA+NWLKKYPCCF VY EN+E+YCRLTK MM+LVEEEE VK+ QE    +RL KLLM+S 
Sbjct: 79  KALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSV 138

Query: 147 NQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVS 206
           NQRLNVVKLNE KR+FGFPD+Y+IRI+PKY D+F+LVNYSGRKSSMEIEL+ W+PELAVS
Sbjct: 139 NQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWEPELAVS 198

Query: 207 AVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTI 266
           AVEA+A+K G+EP FSC LPSTW K WE+F EFNA PYISPY D   L EGSKE EKR++
Sbjct: 199 AVEAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSKESEKRSV 258

Query: 267 GVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREA 326
           G+VHELLSLTLWKK+SIVKL HFKREF LPEKLN +LLKHPGIFYV NKYQ++TV+LRE 
Sbjct: 259 GLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREG 318

Query: 327 YNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMP----VRSEKSE 382
           YNGSELI KDPLVVVKDKFGELMQ+GL+EYN R  L NLEKK+++G+      VR +   
Sbjct: 319 YNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVVRKKDRN 378

Query: 383 DVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDD 417
             R ++ +++  GD+ GGLFDPEERKRFY++LF D
Sbjct: 379 HDRDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822869|ref|XP_002879317.1| hypothetical protein ARALYDRAFT_902159 [Arabidopsis lyrata subsp. lyrata] gi|297325156|gb|EFH55576.1| hypothetical protein ARALYDRAFT_902159 [Arabidopsis lyrata subsp. lyrata]

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 282/395 (71%), Positives = 335/395 (84%), Gaps = 4/395 (1%)

Query: 27  ILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQG 86
           ++R FSLWS KK P+LESALSRN+RWIVN+++KNIILR P+QVA+VK+LQKKFKTLDLQG
Sbjct: 19  LIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASVKFLQKKFKTLDLQG 78

Query: 87  KAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSR 146
           KA+NWLKKYPCCF +Y EN+E+YCRLTK MM+LVEEEE VK+ QE    +RL KLLMMS 
Sbjct: 79  KALNWLKKYPCCFHLYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMMSV 138

Query: 147 NQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVS 206
           NQRLNVVKLNE KR+FGFPD+Y+IRILPKY D+F+LVNYSGRKSSMEIEL+ WKPELAVS
Sbjct: 139 NQRLNVVKLNEFKRSFGFPDDYVIRILPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVS 198

Query: 207 AVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTI 266
           AVEA+A+  G+EP FSC LPSTW K WE+F EFNA PYISPY D   L EGS+E EKR++
Sbjct: 199 AVEAAAKNCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSQESEKRSV 258

Query: 267 GVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREA 326
           G+VHELLSLTLWKK+SIVKL HFKREF LPEKLN +LLKHPGIFYV+NKYQ++TV+LRE 
Sbjct: 259 GLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNAMLLKHPGIFYVANKYQVHTVILREG 318

Query: 327 YNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMP----VRSEKSE 382
           YNGSELI KDPLVVVK+KFGELMQ+GL+EYN R  L NLEKK+++G+      VR +   
Sbjct: 319 YNGSELIHKDPLVVVKEKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVVRKKDRN 378

Query: 383 DVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDD 417
               ++ +++  GD+ GGLFDPEERKRFY++LF D
Sbjct: 379 HDGDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89257625|gb|ABD65113.1| hypothetical protein 31.t00019 [Brassica oleracea]

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/415 (66%), Positives = 347/415 (83%), Gaps = 8/415 (1%)

Query: 8   LGNTSSCQSRLYTLPCFHNILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPS 67
           LG++++ Q    ++P    ++R FSL S +K P+LESALSRN+RWIVN+++KNIILR P+
Sbjct: 5   LGSSTAIQHHTKSIPL---LIRRFSLPSTRKDPDLESALSRNKRWIVNSRLKNIILRCPN 61

Query: 68  QVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVK 127
           QVA VK+LQKKFKTLDLQGKA+NWLKKYPCCF+VY E +E+YCRLTK MM+LVEEEE VK
Sbjct: 62  QVAPVKFLQKKFKTLDLQGKALNWLKKYPCCFDVYLEEDEYYCRLTKPMMALVEEEELVK 121

Query: 128 EMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSG 187
           E QE    +RL KLLMMS  QRLNVVKLNELKR+FGF D+Y++RI+PKY D+F+LVNYSG
Sbjct: 122 EAQEPVLADRLAKLLMMSVGQRLNVVKLNELKRSFGFGDDYVVRIVPKYADVFRLVNYSG 181

Query: 188 RKSSMEIELVSWKPELAVSAVEASAQKQ-GTEPCFSCCLPSTWVKSWEKFKEFNATPYIS 246
           RKSSMEIEL+SWKPELAVSAVEA+A  + G+EP FSC LP+TW   WE+F EFNA+PYIS
Sbjct: 182 RKSSMEIELLSWKPELAVSAVEAAAGNECGSEPGFSCSLPTTWTNPWERFMEFNASPYIS 241

Query: 247 PYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKH 306
           PY +   + EGSKE EKR++G+VHELLSLTLWKK+S+VKL HFK+EF+LPEKLN +LLKH
Sbjct: 242 PYRELGEVVEGSKESEKRSVGLVHELLSLTLWKKLSMVKLSHFKKEFALPEKLNGMLLKH 301

Query: 307 PGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLE 366
           PGIFYVSNKYQ++TVLLRE Y+GSEL++KDPLV+VKDKFGE MQ+GL+EYN+R  L NLE
Sbjct: 302 PGIFYVSNKYQVHTVLLREGYDGSELVQKDPLVIVKDKFGEFMQQGLYEYNRRRYLANLE 361

Query: 367 KKKKRGMMPVRS--EKSEDVR--TEISQQDVIGDKLGGLFDPEERKRFYKVLFDD 417
           KK+++G+  V+S   K + +    E+ +Q+  G + GG+FDPEERKRFY++LF D
Sbjct: 362 KKREKGIESVKSVVRKRDGIEHGDEVDEQENHGGRPGGMFDPEERKRFYQILFSD 416

Source: Brassica oleracea

Species: Brassica oleracea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	420
TAIR|locus:2042561	415	AT2G31290 [Arabidopsis thalian	0.928	0.939	0.689	2.1e-148
TAIR|locus:4515103321	528	WTF1 "what's this factor?" [Ar	0.735	0.585	0.342	1.7e-36
TAIR|locus:2012981	470	AT1G71850 "AT1G71850" [Arabido	0.85	0.759	0.276	1.4e-30
TAIR|locus:2166305	494	emb1692 "embryo defective 1692	0.876	0.744	0.284	1.1e-29
TAIR|locus:2207380	413	AT1G79120 [Arabidopsis thalian	0.307	0.312	0.389	2.1e-28
TAIR|locus:2138738	395	AT4G08940 [Arabidopsis thalian	0.723	0.769	0.292	3.9e-28
TAIR|locus:504955534	409	RPD1 "ROOT PRIMORDIUM DEFECTIV	0.569	0.584	0.302	1e-27
TAIR|locus:2064940	387	WTF9 "AT2G39120" [Arabidopsis	0.680	0.739	0.281	3.5e-27
TAIR|locus:2009230	390	AT1G06440 [Arabidopsis thalian	0.416	0.448	0.307	8.7e-17

TAIR|locus:2042561 AT2G31290 [Arabidopsis thaliana (taxid:3702)]

 Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
 Identities = 273/396 (68%), Positives = 326/396 (82%)

Query:    27 ILRSFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQG 86
             ++R FSLWS KK P+LESALSRN+RWIVN+++KNIILR P+QVA++K+LQKKFKTLDLQG
Sbjct:    19 LIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQG 78

Query:    87 KAINWLKKYPCCFEVYFENNEHYCRLTKRXXXXXXXXXXXXXXXXXAYVERLVKLLMMSR 146
             KA+NWLKKYPCCF VY EN+E+YCRLTK                     +RL KLLM+S 
Sbjct:    79 KALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSV 138

Query:   147 NQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVS 206
             NQRLNVVKLNE KR+FGFPD+Y+IRI+PKY D+F+LVNYSGRKSSMEIEL+ WKPELAVS
Sbjct:   139 NQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVS 198

Query:   207 AVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTI 266
             AVEA+A+K G+EP FSC LPSTW K WE+F EFNA PYISPY D   L EGSKE EKR++
Sbjct:   199 AVEAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSKESEKRSV 258

Query:   267 GVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREA 326
             G+VHELLSLTLWKK+SIVKL HFKREF LPEKLN +LLKHPGIFYV NKYQ++TV+LRE 
Sbjct:   259 GLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREG 318

Query:   327 YNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRG---MMPV--RSEKS 381
             YNGSELI KDPLVVVKDKFGELMQ+GL+EYN R  L NLEKK+++G   + PV  + +++
Sbjct:   319 YNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVVRKKDRN 378

Query:   382 EDVRTEISQQDVIGDKLGGLFDPEERKRFYKVLFDD 417
              D R ++ +++  GD+ GGLFDPEERKRFY++LF D
Sbjct:   379 HD-RDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:4515103321 WTF1 "what's this factor?" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 114/333 (34%), Positives = 171/333 (51%)

Query:    37 KKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKA--INWLKK 94
             +K    +S + R+++  +   I+ I++  P ++ +++ L K  + L L+ +   I  L+K
Sbjct:    79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query:    95 YPCCFEVYFENNEHYCR--LTKRXXXXXXXXXXXXXXXXXAYVERLVKLLMMSRNQRLNV 152
             YP  FE+  E   +  R  +T                     V +L KL+MMS ++R+ +
Sbjct:   139 YPGVFEIV-EEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILL 197

Query:   153 VKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASA 212
              K++ LK + G P E+   I  +YP  F++V  + R  ++E  L  W PELAVSA E S 
Sbjct:   198 EKISHLKTDLGLPLEFRDTICQRYPQYFRVVP-TPRGPALE--LTHWDPELAVSAAELSE 254

Query:   213 QKQGTE------------PCFSCC-LPS--TWVKS-WEKFKEFNATPYISPYLDTKGLGE 256
                 T             P F+   LP      KS   K  +F    YISPY D   L  
Sbjct:   255 DDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRS 314

Query:   257 GSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKY 316
             G+ E EK   GV+HELLSLT  K+  +  L HF+ EF   ++L  +L++HP +FYVS K 
Sbjct:   315 GTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKG 374

Query:   317 QIYTVLLREAYNGSELIEKDPLVVVKDKFGELM 349
             +  +V LREAY  SELI+KDPL +VK+K   L+
Sbjct:   375 ERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2012981 AT1G71850 "AT1G71850" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 107/387 (27%), Positives = 191/387 (49%)

Query:    42 LESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEV 101
             L+ A+ R +       IK++I   P++   +  +  +  +L +  + I +++ +P  F+ 
Sbjct:    37 LDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIEFIRSFPSVFQE 96

Query:   102 YFENNE--H-YCRLTKRXXXXXXXXXXXXXXXXX--AYVERLVKLLMMSRNQRLNVVKLN 156
             +       H +  LT                        +RL+KLLM++R  ++ +  L+
Sbjct:    97 FLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMINRINKIPLEILD 156

Query:   157 ELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQK-- 214
              LK + G P +Y+  ++P++PD F+++    R  S E+ELV W  E AVS +E  A+   
Sbjct:   157 LLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNEHAVSVLEKKARTLR 216

Query:   215 -----QGTEPCFSCCLPSTWV--KSWEKF-KEFNATPYISPYLDTKGLGEGSKEMEKRTI 266
                  +G+   F     + +V  K  +K+  ++   PYISPY +   L   S E +K   
Sbjct:   217 KGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENALHLSATSDESDKWAA 276

Query:   267 GVVHELLSLTLWKKM---SIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLL 323
              V+HE+++L + KK+   +I+ LG F     L  +   +L  HPGIFY+S+K + +TV+L
Sbjct:   277 AVLHEIMNLFVSKKVEKDAILHLGEF---MGLRSRFKRVLHNHPGIFYLSSKLRTHTVVL 333

Query:   324 REAYNGSELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEKSE- 382
             R+ Y    LIE + LV  ++++ +LM   + + N+   + +  KK+ +G   V  E  + 
Sbjct:   334 RDGYKRGMLIESNELVTSRNRYMKLMNT-VKKDNKA--VSSSSKKEDKGK--VEGEVCDT 388

Query:   383 DVRTE---ISQQDVIGDKLGGLFDPEE 406
             D + E   IS  DV  D+ G   D +E
Sbjct:   389 DAKAENDDISGSDVEDDRQGDFVDDDE 415

GO:0005739 "mitochondrion" evidence=IDA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

TAIR|locus:2166305 emb1692 "embryo defective 1692" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 115/404 (28%), Positives = 185/404 (45%)

Query:    30 SFSLWSMKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKA- 88
             S S   + + P L+  + +  R     ++  ++L  P     ++ L K    L ++    
Sbjct:    53 SCSAHKIVRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLA 112

Query:    89 -INWLKKYPCCFEVYFENNEHY-----------C-RLTKRXXXXXXXXXXXXXXXXXAYV 135
              ++ +++YP  FE++     H            C RLT                      
Sbjct:   113 ILSMIRRYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLA 172

Query:   136 ERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYS-GRKSSMEI 194
              +L KLLM+S ++RL + KL  +  +FGFP  +  R+   YPD F+ V+ S GR     +
Sbjct:   173 TKLQKLLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRA----L 228

Query:   195 ELVSWKPELA--VSAVEASAQKQGTEPC----FSCCLPSTWVKSWEKFK-EFNATPYISP 247
             ELVS  PELA  + + E         P      +        +  + F  +F  +P + P
Sbjct:   229 ELVSSDPELANQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCP 288

Query:   248 Y-LDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKH 306
             Y + +  L   S E EKR   VV E+L LT+ K+  I  L HF++EFSLP KL  L+++H
Sbjct:   289 YKMSSDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRH 348

Query:   307 PGIFYVSNKYQIYTVLLREAYNGS-ELIEKDPLVVVKDKFGELMQEGLHEYNQRHRLMNL 365
             P +FYVS K    +V L EAYN + +L++KD  +V++++  +L+QEG     +R R    
Sbjct:   349 PELFYVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRR---- 404

Query:   366 EKKKKRGMMPVRSEKSEDVRTEISQQDV---IGDKLGGLFDPEE 406
              K    G   V  ++ +D   +    D+     D    LFD E+
Sbjct:   405 -KGATLGDKSVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSED 447

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

TAIR|locus:2207380 AT1G79120 [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
 Identities = 51/131 (38%), Positives = 80/131 (61%)

Query:   234 EKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREF 293
             E+F+++    + SPYL+ +       +  KR + V+HELLSLT+ K+++  +L  F  E+
Sbjct:   280 EEFEKWQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEY 339

Query:   294 SLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEGL 353
              LP +L + L+KH GIFY++NK    TV L++AY GS LIEK PL++  D+F  L   G 
Sbjct:   340 LLPSRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALC--GR 397

Query:   354 HEYNQRHRLMN 364
              E N  + + +
Sbjct:   398 KEVNLSNEMQS 408

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2138738 AT4G08940 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 93/318 (29%), Positives = 155/318 (48%)

Query:    38 KVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDL-QGKAIN-WLKKY 95
             K+P LES +SR+  +    + K  I + P ++  +    K ++ L   +G+ +  ++ K+
Sbjct:    67 KLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKH 126

Query:    96 PCCFEVY-FENNEHYCRLTKRXXXXXXXXXXXXXXXXXAYVERLVKLLMMSRNQRLNVVK 154
             P  F+ Y   + + +   T+                    V  + KLLMM++++R+ + K
Sbjct:   127 PLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSK 186

Query:   155 LNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEA--SA 212
             ++  +  FG P+++  R+  KYPD F++V  +G   +  +ELV+W   LAVS +E     
Sbjct:   187 IHHTRLLFGIPEDFRDRVA-KYPDYFRVV--TGGDGNRVLELVNWDTNLAVSELERLFMI 243

Query:   213 QKQGTEPCFSCCLP-----STWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIG 267
              +   +  F   +          K   K    N  P +SPY D   L   S E EK  +G
Sbjct:   244 DEDKAKRVFKFPVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEKYRVG 303

Query:   268 VVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAY 327
             +VHE L+LTL K+ SI  +  FK EFSL  +   +L K    FY++     +TV L++AY
Sbjct:   304 IVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAY 363

Query:   328 N-GSELIEKDPLVVVKDK 344
             +    L+ KDP VV  +K
Sbjct:   364 DENGVLVSKDPQVVFNEK 381

GO:0009507 "chloroplast" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:504955534 RPD1 "ROOT PRIMORDIUM DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 79/261 (30%), Positives = 134/261 (51%)

Query:   109 YCRLTKRXXXXXXXXXXXXXXXXXAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEY 168
             YCRLT++                   V RL KL+MMS   R+ +  +   +  FG P+++
Sbjct:   124 YCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDF 183

Query:   169 IIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQ----KQGTEP----- 219
                ++ K+P  F+L++    +    IE+V   P L++ A+E   +     +G +      
Sbjct:   184 EYSVILKHPQFFRLIDGEETRDKY-IEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRF 242

Query:   220 CFSCCLPSTWVKSWEKFK----EFNATPYISPYLDTKGLG----EGSKEMEKRTIGVVHE 271
              F    P  + K  + F+    ++   PY SPY D  G      E    +EKR++  +HE
Sbjct:   243 SFVVNFPPGF-KIGKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHE 301

Query:   272 LLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNK--Y-QIYTVLLREAYN 328
             LLSLT+ KK+++ ++ HF+   +LP+KL   LL+H GIFY+S +  Y +++TV LRE Y 
Sbjct:   302 LLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYK 361

Query:   329 GSELIEKDPLVVVKDKFGELM 349
               EL+E + + + + +  EL+
Sbjct:   362 RGELVEPNDVYLARRRLAELV 382

GO:0009507 "chloroplast" evidence=ISM

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0010102 "lateral root morphogenesis" evidence=IMP

TAIR|locus:2064940 WTF9 "AT2G39120" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 87/309 (28%), Positives = 144/309 (46%)

Query:    58 IKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYPCCFEVYF--ENNEHYCRLTKR 115
             +KN I++ P++   +  + KK +  D+  K  ++L+K+P  FE +   E N  + RLT  
Sbjct:    55 LKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPE 114

Query:   116 XXXXXXXXXXXXXXXXXAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPK 175
                                 +RL KL++MS++  L +  +  +K   G PD+Y+     +
Sbjct:   115 ATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-----Q 169

Query:   176 YPDM-----FQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTE-------PCFSC 223
             +PDM     F+ V+       + ++       L+V    A  +++G         P F  
Sbjct:   170 FPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPS 229

Query:   224 --CLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKM 281
               C     ++ W    EF   PY+SPY D   L   S   EKR +G +HELL L +    
Sbjct:   230 KGCRLRVKIEDW--LMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSA 287

Query:   282 SIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVV 341
                KL   K+ F LP+K++    +HP IFY+S K +  T +LRE Y     +E  P++ V
Sbjct:   288 ERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGV 347

Query:   342 KDKFGELMQ 350
             + K+ +LM+
Sbjct:   348 RKKYIQLMK 356

GO:0005739 "mitochondrion" evidence=IDA

GO:0000373 "Group II intron splicing" evidence=IMP

GO:0003723 "RNA binding" evidence=IDA

GO:0017004 "cytochrome complex assembly" evidence=IMP

TAIR|locus:2009230 AT1G06440 [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 8.7e-17, P = 8.7e-17
 Identities = 56/182 (30%), Positives = 93/182 (51%)

Query:   179 MFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCLPSTW--VKSWE-K 235
             + +LV    ++   E  +  W+  +  S  + S  +   +  F    P      K+++ K
Sbjct:   195 ILELVQEEEKRLEFEAAVEKWRV-VECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAK 253

Query:   236 FKEFNATPYISPYLDTKGLGE---GSKEMEKRTIGVVHELLSLTLWKKMSIVKLGHFKRE 292
              KE+   PY+ PY D  G  +   G   +EKR + + HE L+LT+ K + + K+ HF++ 
Sbjct:   254 VKEWQRLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKC 313

Query:   293 FSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVVKDKFGELMQEG 352
             F +   +  L L HPG+FYVS K + +TV LREAY    LI+ +P+   + K  +L+  G
Sbjct:   314 FGIDLNIRDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLG 373

Query:   353 LH 354
              H
Sbjct:   374 RH 375

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.19	LOW CONFIDENCE prediction!
3rd Layer	3.4.19.12	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.V.284.1 hypothetical protein (392 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	420
pfam11955	332	pfam11955, PORR, Plant organelle RNA recognition d	1e-129

>gnl|CDD|221338 pfam11955, PORR, Plant organelle RNA recognition domain

 Score =  376 bits (967), Expect = e-129
 Identities = 137/333 (41%), Positives = 198/333 (59%), Gaps = 15/333 (4%)

Query: 37  KKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQGKAINWLKKYP 96
            + P L+ A+ R +R  +  ++K+++L  P     ++ L K  + L L   A+ +L+KYP
Sbjct: 2   VRDPALDKAVEREKRLRLVLRLKDLLLSQPDHSLPLRDLSKLRRQLGLPRGALAFLRKYP 61

Query: 97  CCFEVYFENNEH--YCRLTKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVK 154
             FE++   ++     RLT +   L+ EE  + E  E   V+RL KLLMMS+++RL + K
Sbjct: 62  SIFELFRHPSDSVLCVRLTPKAEDLLAEEARLLESSEPDLVDRLRKLLMMSKDRRLPLEK 121

Query: 155 LNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAVSAVEASAQK 214
           L  L+R+ G PD++   ++PKYPD F+LV+  G      +ELVSW PELAVSA+E   + 
Sbjct: 122 LAHLRRDLGLPDDFRDSLVPKYPDYFRLVDEDGGD---GLELVSWDPELAVSALEKRREI 178

Query: 215 Q-------GTEPCFSCCLPSTW---VKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKR 264
           +            F    P  +    K  EK +E+   PYISPY D   L  GS E EKR
Sbjct: 179 EDRGGDRVDRRFAFPVKFPPGFKLRKKFREKLEEWQKLPYISPYEDASHLDPGSDEAEKR 238

Query: 265 TIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLR 324
            + V+HELLSLT+ K+  +  L HF++EF LP+KL  +LL+HPGIFY+S K + +TV LR
Sbjct: 239 AVAVLHELLSLTVEKRTEVDHLTHFRKEFGLPQKLRKVLLRHPGIFYLSTKGKRHTVFLR 298

Query: 325 EAYNGSELIEKDPLVVVKDKFGELMQEGLHEYN 357
           EAY+  EL+EKDPLV+ ++K  ELM EG  E  
Sbjct: 299 EAYDRGELVEKDPLVLAREKLLELMLEGKRERK 331

This family, which was previously known as DUF860, has been shown to be a component of group II intron ribonucleoprotein particles in maize chloroplasts. The domain is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. All of the members are predicted to localise to mitochondria or chloroplasts. It seems likely that most PORR proteins function in organellar RNA metabolism. Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	420
PF11955	335	PORR: Plant organelle RNA recognition domain; Inte	100.0
PF11955	335	PORR: Plant organelle RNA recognition domain; Inte	98.59

>PF11955 PORR: Plant organelle RNA recognition domain; InterPro: IPR021099 The plant organelle RNA recognition (PORR) domain, previously known as DUF860, is a component of group II intron ribonucleoprotein particles in maize chloroplasts

Probab=100.00  E-value=2.7e-113  Score=857.30  Aligned_cols=318  Identities=46%  Similarity=0.735  Sum_probs=305.0

Q ss_pred             ccCChhhHHHHhhccchhHHHHHHHHHhhCCCCccchHHHHhhccccCCC-chHHHHhhhCCcceEEeecC--CcceEec
Q 036566           36 MKKVPELESALSRNRRWIVNNQIKNIILRLPSQVATVKYLQKKFKTLDLQ-GKAINWLKKYPCCFEVYFEN--NEHYCRL  112 (420)
Q Consensus        36 ~~kd~~LD~~v~r~k~l~~~~~lk~li~s~P~~~ipl~~L~k~~~~L~L~-~~v~~FLrkyP~iF~~~~~~--~~~~~rL  112 (420)
                      -+||++||++|+++|+++++++|+++|+++|++++|+++|++++++|||+ .++++||+|||+||++|.++  +++||+|
T Consensus         1 w~rd~~lD~~i~~~k~l~~v~~l~~~i~~~p~~~~pl~~l~k~~~~L~l~~~~~~~flrkyP~iF~~~~~~~~~~~~~~L   80 (335)
T PF11955_consen    1 WVRDPYLDKVIEREKRLRFVLRLKDLILSQPSHSLPLRDLSKLRRQLGLKPRKVSRFLRKYPSIFEVFQHPSRSVPWFRL   80 (335)
T ss_pred             CCCchhHHHHHHhhhhHHHHHHHHHHHHcCCCCcccHHHHHHHHHhcCCCcccHHHHHHhCCceEEEeccCCCCCceEEe
Confidence            09999999999999999999999999999999999999999999999996 78999999999999999865  7999999


Q ss_pred             CHHHHHHHHHHHHHHhhChHHHHHHHHHHhccCCCCeechHHHHHHHHhcCCChhhhhccCCCCCCCeEEee-cCCCCcc
Q 036566          113 TKRMMSLVEEEESVKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVN-YSGRKSS  191 (420)
Q Consensus       113 T~~a~~L~~eE~~v~~~~e~~~V~rLrKLLMMS~~rrLpL~kl~~lr~dLGLP~DF~~~lv~~yPd~Frvv~-~~g~~~~  191 (420)
                      ||+|++|++||+++++++++++|++|+||||||.+++|||++|++++||||||+||+++++++|||+|+||+ .+|.   
T Consensus        81 T~~a~~L~~eE~~~~~~~e~~~v~rL~KLLMMS~~~rlpL~ki~~l~~dLGLP~Df~~~lv~~yP~~Frvv~~~~~~---  157 (335)
T PF11955_consen   81 TPEAEDLLREERRVREEMEPDLVERLRKLLMMSKDRRLPLSKIAHLRRDLGLPDDFRDSLVPKYPDYFRVVDLEDGG---  157 (335)
T ss_pred             CHHHHHHHHHHHHHHHhChHHHHHHHHHHhccCCCCcccHHHHHHHHHHcCCChhhccchhhhCCCCcEEeecCCCC---
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999 4333   


Q ss_pred             ceEEEeecCCCccccHHHHHHhhc---------CCCCcccccCCchh---hHhHHHHhhhhcCCCCCCCCCCCCCCCCCh
Q 036566          192 MEIELVSWKPELAVSAVEASAQKQ---------GTEPCFSCCLPSTW---VKSWEKFKEFNATPYISPYLDTKGLGEGSK  259 (420)
Q Consensus       192 ~~LeLv~Wd~~LAVS~~Ek~a~~~---------g~~~~F~~~fP~g~---~~~~e~l~~fQ~LPYiSPYed~~~l~~~S~  259 (420)
                      .+||||+|||+||||++|++++..         +.+++||++||+||   ++.++|+++||+|||+|||+|+++++++|+
T Consensus       158 ~~LeLv~Wd~~LAvs~~E~~~~~~~~~~~~~~~~~~~~Fp~~fp~G~~l~k~~~~~l~~fQ~lPy~SPYed~~~l~~~s~  237 (335)
T PF11955_consen  158 RYLELVSWDPELAVSALEKRAEKEYREKREDGFDRPLAFPVSFPKGFRLKKKFREWLEEFQKLPYISPYEDASHLDPGSD  237 (335)
T ss_pred             CEEEEeecCCccCcCccchhhhhccccccccccCCceeeeecCCCCccccHHHHHHHHHHhcCCCCCCCCCccCCCCCCh
Confidence            589999999999999999999832         24689999999999   467899999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhccchhhhhhhHHhhhhhhcCCcHHHHHHHhhCCCceEEEEeCceeEEEEeeccCCCCCccCCchh
Q 036566          260 EMEKRTIGVVHELLSLTLWKKMSIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLV  339 (420)
Q Consensus       260 e~EKRaVaVlHELLSLTveKr~~v~~L~~fr~efgLp~k~~~~l~rHPgIFYvS~Kg~~~TVfLREAY~~~~Liek~PL~  339 (420)
                      ++|||||||+||||||||||||++++|+|||+|||||++|+++|+|||||||||+||+|+||||||||++|+|||||||+
T Consensus       238 ~~EKRaVaVlHElLSLTveKr~~~~~L~~fr~ef~lp~k~~~~l~rHPgIFYvS~kg~~~TVfLrEAY~~~~Liek~Pl~  317 (335)
T PF11955_consen  238 EAEKRAVAVLHELLSLTVEKRTEVDHLTHFRKEFGLPQKFRRLLLRHPGIFYVSLKGKRHTVFLREAYDGGELIEKHPLV  317 (335)
T ss_pred             HHHhHHHHHHHHHHHhhhhhhccHHHHHHHHHHhCCcHHHHHHHHhCCCeEEEeccCCceEEEEeeccCCCCCCCCCchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhhhhH
Q 036566          340 VVKDKFGELMQEGLHEY  356 (420)
Q Consensus       340 ~iR~K~~~Lm~~g~~~y  356 (420)
                      .+|+||++||+.|.+++
T Consensus       318 ~~r~k~~~Lm~~~~~~~  334 (335)
T PF11955_consen  318 VIREKFLELMQEGRRKR  334 (335)
T ss_pred             HHHHHHHHHHhhccccc
Confidence            99999999999999864

It is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. Proteins containing this domain are predicted to localise to mitochondria or chloroplasts []. It seems likely that most PORR proteins function in organellar RNA metabolism [].

>PF11955 PORR: Plant organelle RNA recognition domain; InterPro: IPR021099 The plant organelle RNA recognition (PORR) domain, previously known as DUF860, is a component of group II intron ribonucleoprotein particles in maize chloroplasts

Probab=98.59  E-value=2.1e-07  Score=94.52  Aligned_cols=141  Identities=23%  Similarity=0.444  Sum_probs=106.6

Q ss_pred             HHhhChHHHHHHHHHHhccCCCCeechHHHHHHHHhcCCChhhhhccCCCCCCCeEEeecCCCCccceEEEeecCCCccc
Q 036566          126 VKEMQESAYVERLVKLLMMSRNQRLNVVKLNELKRNFGFPDEYIIRILPKYPDMFQLVNYSGRKSSMEIELVSWKPELAV  205 (420)
Q Consensus       126 v~~~~e~~~V~rLrKLLMMS~~rrLpL~kl~~lr~dLGLP~DF~~~lv~~yPd~Frvv~~~g~~~~~~LeLv~Wd~~LAV  205 (420)
                      +..+.....|.+|+.+|--++++.||++.+...+..|||+.-=..+++.+||..|.+...++. +.+++.|..       
T Consensus        11 i~~~k~l~~v~~l~~~i~~~p~~~~pl~~l~k~~~~L~l~~~~~~~flrkyP~iF~~~~~~~~-~~~~~~LT~-------   82 (335)
T PF11955_consen   11 IEREKRLRFVLRLKDLILSQPSHSLPLRDLSKLRRQLGLKPRKVSRFLRKYPSIFEVFQHPSR-SVPWFRLTP-------   82 (335)
T ss_pred             HHhhhhHHHHHHHHHHHHcCCCCcccHHHHHHHHHhcCCCcccHHHHHHhCCceEEEeccCCC-CCceEEeCH-------
Confidence            334455668999999999999999999999999999999533335789999999999874322 223444421       


Q ss_pred             cHHHHHHhhcCCCCcccccCCchhhHhHHHHhhhhcCCCCCCCCCCCCCCCCChhhhHHHHHHHHHHhhccchhhhhhhH
Q 036566          206 SAVEASAQKQGTEPCFSCCLPSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKMSIVK  285 (420)
Q Consensus       206 S~~Ek~a~~~g~~~~F~~~fP~g~~~~~e~l~~fQ~LPYiSPYed~~~l~~~S~e~EKRaVaVlHELLSLTveKr~~v~~  285 (420)
                                            .-    ..+           ++.-.   ..-.+.|--+|..+.-||.|+..+|+.+.+
T Consensus        83 ----------------------~a----~~L-----------~~eE~---~~~~~~e~~~v~rL~KLLMMS~~~rlpL~k  122 (335)
T PF11955_consen   83 ----------------------EA----EDL-----------LREER---RVREEMEPDLVERLRKLLMMSKDRRLPLSK  122 (335)
T ss_pred             ----------------------HH----HHH-----------HHHHH---HHHHhChHHHHHHHHHHhccCCCCcccHHH
Confidence                                  11    111           00000   011245577899999999999999999999


Q ss_pred             HhhhhhhcCCcHHHHHH-HhhCCCceEEEE
Q 036566          286 LGHFKREFSLPEKLNVL-LLKHPGIFYVSN  314 (420)
Q Consensus       286 L~~fr~efgLp~k~~~~-l~rHPgIFYvS~  314 (420)
                      |.|++.+||||..|..- +-+||+.|=|..
T Consensus       123 i~~l~~dLGLP~Df~~~lv~~yP~~Frvv~  152 (335)
T PF11955_consen  123 IAHLRRDLGLPDDFRDSLVPKYPDYFRVVD  152 (335)
T ss_pred             HHHHHHHcCCChhhccchhhhCCCCcEEee
Confidence            99999999999999855 799999999987

It is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. Proteins containing this domain are predicted to localise to mitochondria or chloroplasts []. It seems likely that most PORR proteins function in organellar RNA metabolism [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	420
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 2e-10
 Identities = 65/440 (14%), Positives = 142/440 (32%), Gaps = 128/440 (29%)

Query: 21  LPCFH--NILRS-FSLWSMKKVPELESALSRNRR--WIVNNQIKNIILRLPSQVATVKY- 74
             C    ++ +S  S   +  +   + A+S   R  W + ++ + ++ +   +V  + Y 
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 75  -LQKKFKTLDLQGKAINWLKKYPCCFEVYFENNEHYCRLTKRMMSLVEEEESVKEMQESA 133
            L    KT   Q   +   + Y    +  + +N+      K     V   +   ++++  
Sbjct: 93  FLMSPIKTEQRQPSMMT--RMYIEQRDRLYNDNQ---VFAKYN---VSRLQPYLKLRQ-- 142

Query: 134 YVERLVKLLMMSRNQRL---------------NVVKLNELKRNFGFP-----------DE 167
                  LL +   + +               +V    +++    F             E
Sbjct: 143 ------ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196

Query: 168 YIIRILPKYPDMFQLV-NYSGRKSSMEIELVSWKPELAVSAVEASAQKQGTEPCFSCCL- 225
            ++ +L K   ++Q+  N++ R             +L + +++A  ++      +  CL 
Sbjct: 197 TVLEMLQKL--LYQIDPNWTSRSDHSS------NIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 226 ----PSTWVKSWEKFKEFNATPYISPYLDTKGLGEGSKEMEKRTIGVVHELLSLTLWKKM 281
                   V++ + +  FN        L  K L      +  R   V   L +       
Sbjct: 249 VLLN----VQNAKAWNAFN--------LSCKIL------LTTRFKQVTDFLSA----ATT 286

Query: 282 SIVKLGHFKREFSLPEKLNVLLLKHPGIFYVSNKYQIYTVLLREAYNGSELIEKDPLVVV 341
           + + L H     +  E  + LLLK     Y+  + Q    L RE    +      P  + 
Sbjct: 287 THISLDHHSMTLTPDEVKS-LLLK-----YLDCRPQ---DLPREVLTTN------PRRL- 330

Query: 342 KDKFGELMQEGLHEYNQRHRLMNLEKKKKRGMMPVRSEKSEDVRTEISQQDVIGDKLGGL 401
                E +++GL  +    + +N +K                         +I   L  L
Sbjct: 331 -SIIAESIRDGLATW-DNWKHVNCDKLTT----------------------IIESSLNVL 366

Query: 402 FDPEERKRFYK--VLFDDGA 419
            +P E ++ +    +F   A
Sbjct: 367 -EPAEYRKMFDRLSVFPPSA 385

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00