Citrus Sinensis ID: 036603

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920------
MVCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSVATESVPKEAQESKMDQPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLAA
ccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccEEccccccccccccccEEEEEEEccccEEEEEEEEEEEEcccccccEEEEccccEEEEEEEccEEcccccEEEEccEEEEEccccccEEEEEEEEEEccccccccEEEEEcccccccccccccccccccccccccccEEEEEEEEccccccEEEccccccccccccccEEEEEEcccccccHHHHHHHHccccEEEEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccccccEEEEccccccccccccHHHHHHEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHcccccEEEEEEEEcccccEEEEEEEEccccccccccccccEEEEEEEEEccccccccccccccccccccccccccccEEEEEEEcccEEEEEEccccccccccccccccccEEccccccHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcc
cccEEccccccEEEEEEEHEEcccHHHHHccccEEEEEccccccccccccccccccEEEHHccccccEEEEEEEEEEEEccccEEEEEEEEEEEccccccccEEEccccEEEEEEEEcccEccHHHcEEcccEEEEcccccccEEEEEEEEEccHHcccEEEEEEccccEEccccccccEEEEEccccccEEEEEEEEEEEcHccccEEEEccccccccccccccEEEEEcccccccHHHccEEEEcEEEEcccEEEccccEEEEEEEEccccccHHHHHHHHHHHHHHccHHHccccEcccEEEEEEEHcccccHHHcccccEEcccEEEcccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHccEEEEEcccccEEcHHHHHHHHHHHccccHHHHHHHHHHccccEEEEEccccHcccEEEEEEEEccccccccccccccEEEEEEEEEcccccccccEEcccccccccccccccccccEEEEEEcccEEEEEcccccccccHHHccccccEEEEccccHHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHccccccccccHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcc
mvckicpghpcsilLISWCTYFFFQrtkqtsgrlvcsvatesvpkeaqeskmdqpkeiflkdykmpnyyfdTVDLKfslgeektivSSKItvfprvegsssplvldgqdlkLVSIKVNGielkegdyhldsrhltlqsppngafTLEIVTEiypqkntslegiykssgnfctqceaegfrkitfyqdrpdIMAKYKCYIEADKSLYPVLLsngnliergnleggrhyalwedpfkkpcYLFALVAgqlesrddifvtrsgrkvslriwtpaqdlpktAHAMYSLKAAMKWdedvfgleydldlfnivavpdfnmgamenkslnifnsklvlaspetasdadYAAILGVIGheyfhnwtgnrvtcrDWFQLSLKEGltvfrdqefssdmgsrTVKRIADVsklrnyqfpqdagpmahpvrphsyikgAEVVRMYKTLLgsqgfrkgmdlyfkrhdgqavtcEDFFAAMRDANDAEFANFLLWYsqagtprlkvtssysaeTRTYslefgqevpstpgqpvkepmfiPVAIGLlnssgkdmplssvyhngklqslgsnnqpvyTTVLRVTKKEEEFvfsdiserpipsilrgysapirlesdlsdsdLFFLLandsdefnrWEAGQVLARKLMLSLVADfqqnkplvlnpkfvhgfrsmlgdssldKEFIAKAitlpgegeimdmmevadpdAVHAVRTFIRKQLASELKAEFLTTVennrstgeyvfnHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLldhpafdlrnpnkvysliggfcgspvnlhakdgsgykfLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLAA
MVCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSVATesvpkeaqeskmdqpkeIFLKDYKMPNYYFDTVDLKFSLGEEKTIvsskitvfprvegsssplvldgqdlKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAgqlesrddifvtrsgrkvslriwtpaqdlpkTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVfrdqefssdmgsrtVKRIADVSKLRNYQFpqdagpmahpvrpHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYsqagtprlkvTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNgklqslgsnnqpvYTTVLRVTKKEEefvfsdiserpipsiLRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLAA
MVCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSVATESVPKEAQESKMDQPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRlesdlsdsdlffllandsdEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLAA
*VCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSV*******************IFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEF*********KRIADVSKLRNYQF*********PVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVT*****************************MFIPVAIGLLN***********Y***********NQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIM*******************
*********PC*ILLISWCTYF************************************FLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIE**NLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSL*****************MFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA*
MVCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSVATE************QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLAA
MVCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSVATE************QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQS*****QPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVCKICPGHPCSILLISWCTYFFFQRTKQTSGRLVCSVATESVPKEAQESKMDQPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query926 2.2.26 [Sep-21-2011]
P04825870 Aminopeptidase N OS=Esche N/A no 0.922 0.981 0.467 0.0
P45274869 Aminopeptidase N OS=Haemo yes no 0.917 0.978 0.460 0.0
P37893863 Aminopeptidase N OS=Caulo yes no 0.916 0.983 0.435 0.0
O969351085 M1 family aminopeptidase N/A no 0.901 0.769 0.359 1e-161
P55786919 Puromycin-sensitive amino yes no 0.435 0.438 0.251 3e-26
Q11011920 Puromycin-sensitive amino yes no 0.455 0.458 0.250 4e-26
P95928785 Leucyl aminopeptidase OS= yes no 0.417 0.492 0.253 6e-25
Q974N6781 Probable aminopeptidase 2 yes no 0.410 0.486 0.253 2e-24
Q59KZ1924 Aminopeptidase 2 OS=Candi N/A no 0.516 0.517 0.233 9e-24
Q8SQI6864 Probable M1 family aminop yes no 0.404 0.434 0.261 3e-22
>sp|P04825|AMPN_ECOLI Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2 Back     alignment and function desciption
 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/885 (46%), Positives = 558/885 (63%), Gaps = 31/885 (3%)

Query: 54  QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
           QP+  +  DY+ P+Y    +DL F L  +KT+V++ ++   R   S +PL L+G+DLKLV
Sbjct: 4   QPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTA-VSQAVRHGASDAPLRLNGEDLKLV 62

Query: 114 SIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQ 173
           S+ +N        +  +   L + + P   FTL+I+ EI P  NT+LEG+Y+S    CTQ
Sbjct: 63  SVHINDEPWTA--WKEEEGALVISNLPE-RFTLKIINEISPAANTALEGLYQSGDALCTQ 119

Query: 174 CEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDP 233
           CEAEGFR IT+Y DRPD++A++   I ADK  YP LLSNGN + +G LE GRH+  W+DP
Sbjct: 120 CEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDP 179

Query: 234 FKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDED 293
           F KPCYLFALVAG  +   D F TRSGR+V+L ++    +L +   AM SLK +MKWDE+
Sbjct: 180 FPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEE 239

Query: 294 VFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEY 353
            FGLEYDLD++ IVAV  FNMGAMENK LNIFNSK VLA  +TA+D DY  I  VIGHEY
Sbjct: 240 RFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEY 299

Query: 354 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGP 413
           FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD+GSR V RI +V  +R  QF +DA P
Sbjct: 300 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASP 359

Query: 414 MAHPVRPH------------SYIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCE 461
           MAHP+RP              Y KGAEV+RM  TLLG + F+KGM LYF+RHDG A TC+
Sbjct: 360 MAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCD 419

Query: 462 DFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKE 521
           DF  AM DA++ + ++F  WYSQ+GTP + V   Y+ ET  Y+L   Q  P+TP Q  K+
Sbjct: 420 DFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQ 479

Query: 522 PMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISE 581
           P+ IP AI L ++ GK +PL    H            PV  +VL VT+ E+ FVF ++  
Sbjct: 480 PLHIPFAIELYDNEGKVIPLQKGGH------------PV-NSVLNVTQAEQTFVFDNVYF 526

Query: 582 RPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQN 641
           +P+P++L  +SAP++LE   SD  L FL+ +  ++F+RW+A Q L    +   VA  QQ 
Sbjct: 527 QPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQG 586

Query: 642 KPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRK 701
           +PL L       FR++L D  +D    A+ +TLP   E+ ++ ++ DP A+  VR  + +
Sbjct: 587 QPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTR 646

Query: 702 QLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYK 761
            LA+EL  E L  + N     EY   H ++A+R L+N  L +LA  E      L  +++ 
Sbjct: 647 TLATELADELL-AIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFH 705

Query: 762 TATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECV 821
            A NMT+  AAL+A V      RD ++ ++  KW  + LV++KWF LQA S     +E V
Sbjct: 706 EANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETV 765

Query: 822 QRLLDHPAFDLRNPNKVYSLIGGFCGS-PVNLHAKDGSGYKFLGEMVVQLDKINPQVASR 880
           + LL H +F + NPN++ SLIG F GS P   HA+DGSGY FL EM+  L+  NPQVASR
Sbjct: 766 RGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASR 825

Query: 881 MVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA 925
           ++    R +R+D  RQ   +A LE +     LS +++E  +K+LA
Sbjct: 826 LIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 870
Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.
Escherichia coli (strain K12) (taxid: 83333)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2
>sp|P45274|AMPN_HAEIN Aminopeptidase N OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=pepN PE=3 SV=1 Back     alignment and function description
>sp|P37893|AMPN_CAUCR Aminopeptidase N OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=pepN PE=3 SV=2 Back     alignment and function description
>sp|O96935|AMP1_PLAFQ M1 family aminopeptidase OS=Plasmodium falciparum (isolate FcB1 / Columbia) PE=1 SV=2 Back     alignment and function description
>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 Back     alignment and function description
>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 Back     alignment and function description
>sp|P95928|APE2_SULSO Leucyl aminopeptidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=ape2 PE=1 SV=1 Back     alignment and function description
>sp|Q974N6|APE2_SULTO Probable aminopeptidase 2 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=ape2 PE=3 SV=1 Back     alignment and function description
>sp|Q59KZ1|APE2_CANAL Aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APE2 PE=1 SV=2 Back     alignment and function description
>sp|Q8SQI6|AMP11_ENCCU Probable M1 family aminopeptidase 1 OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU01_0140 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query926
224053881918 predicted protein [Populus trichocarpa] 0.970 0.979 0.859 0.0
356511482 1033 PREDICTED: aminopeptidase N-like [Glycin 0.978 0.877 0.825 0.0
224074966950 predicted protein [Populus trichocarpa] 0.970 0.946 0.839 0.0
359474189897 PREDICTED: LOW QUALITY PROTEIN: aminopep 0.944 0.975 0.843 0.0
4494524641005 PREDICTED: aminopeptidase N-like [Cucumi 0.971 0.895 0.803 0.0
12324950964 putative aminopeptidase; 4537-10989 [Ara 0.965 0.927 0.813 0.0
297837009977 hypothetical protein ARALYDRAFT_893061 [ 0.967 0.917 0.819 0.0
25289686964 probable aminopeptidase F24D7.4 [importe 0.965 0.927 0.812 0.0
240254315987 Peptidase M1 family protein [Arabidopsis 0.965 0.905 0.806 0.0
3341836111013 Peptidase M1 family protein [Arabidopsis 0.965 0.882 0.784 0.0
>gi|224053881|ref|XP_002298026.1| predicted protein [Populus trichocarpa] gi|222845284|gb|EEE82831.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1633 bits (4228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 780/907 (85%), Positives = 841/907 (92%), Gaps = 8/907 (0%)

Query: 28  KQTSGRLVCSVATESVPKEAQESKMDQPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVS 87
           KQ   RL+C+VATE +PK+ +ESKMD PKEIFLKDYK+P+YYFD+VDL F LG+EKTIVS
Sbjct: 12  KQDRRRLICAVATEPLPKQVEESKMDAPKEIFLKDYKLPDYYFDSVDLTFLLGDEKTIVS 71

Query: 88  SKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLE 147
           SKITV PRVEGSSSPLVLDG DLKL+S+KVNG ELK GDYHL+SRHLT+ SPP+G FTLE
Sbjct: 72  SKITVLPRVEGSSSPLVLDGADLKLLSVKVNGEELKNGDYHLESRHLTILSPPSGKFTLE 131

Query: 148 IVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYP 207
           IVTEIYPQKNTSLEG+YKSSGNFCTQCEAEGFRKIT+YQDRPDIMAKY   IEADKSLYP
Sbjct: 132 IVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDIMAKYTVRIEADKSLYP 191

Query: 208 VLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRI 267
           VLLSNGNL+E+G+LEGG+HY LWEDPFKKPCYLFALVAGQLESRDD+FVTRSGR VSLRI
Sbjct: 192 VLLSNGNLLEQGDLEGGKHYVLWEDPFKKPCYLFALVAGQLESRDDMFVTRSGRNVSLRI 251

Query: 268 WTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNS 327
           WTPAQD+PKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDF+MGAMENKSLNIFNS
Sbjct: 252 WTPAQDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFDMGAMENKSLNIFNS 311

Query: 328 KLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD 387
           KLVLASPETASDADYAAIL VIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD
Sbjct: 312 KLVLASPETASDADYAAILRVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD 371

Query: 388 MGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIK--------GAEVVRMYKTLLGS 439
           MGSRTVKRI+DVS+LR  QFPQDAGPMAHPVRPHSYIK        GAEVVRMYKTLLGS
Sbjct: 372 MGSRTVKRISDVSRLRISQFPQDAGPMAHPVRPHSYIKMDNFYTVTGAEVVRMYKTLLGS 431

Query: 440 QGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAE 499
           QGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDA+FANFL WYSQAGTP +KVTSSY +E
Sbjct: 432 QGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDADFANFLQWYSQAGTPLVKVTSSYDSE 491

Query: 500 TRTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQP 559
             T++L+F QEVP TPGQPVKEPMFIPV +GLL++SGKDMPLSSVYH+G L+S+ S++QP
Sbjct: 492 AHTFTLKFSQEVPPTPGQPVKEPMFIPVVLGLLDTSGKDMPLSSVYHDGALKSIASDSQP 551

Query: 560 VYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNR 619
            Y+T+LRVTKKEEEFVFSDI ERP+PS+LRG+SAPIRLESDLSDSDLFFLLA+DSDEFNR
Sbjct: 552 AYSTILRVTKKEEEFVFSDILERPVPSLLRGFSAPIRLESDLSDSDLFFLLAHDSDEFNR 611

Query: 620 WEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGE 679
           WEAGQVLARKLMLSLVADFQQ KPLVLNPKFV G RS+L DS+LDKEFIAKAITLPGEGE
Sbjct: 612 WEAGQVLARKLMLSLVADFQQGKPLVLNPKFVQGLRSILSDSNLDKEFIAKAITLPGEGE 671

Query: 680 IMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNI 739
           IMDMMEVADPDAVHAVR+FIRKQLASELKAEFL TVENNRS+ EYVFNH NMARRALKNI
Sbjct: 672 IMDMMEVADPDAVHAVRSFIRKQLASELKAEFLRTVENNRSSEEYVFNHPNMARRALKNI 731

Query: 740 ALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDY 799
           ALAYLASLED ++ ELAL EYKTATNMT+QFAALAAI Q PGK  DEVL DFY KWQ ++
Sbjct: 732 ALAYLASLEDQELTELALHEYKTATNMTDQFAALAAIAQNPGKTCDEVLADFYTKWQDEF 791

Query: 800 LVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSG 859
           LVVNKWFALQAMSD+PGNVE V+ LL+HPAFDLRNPNKVYSLI  FC S VN HAKDGSG
Sbjct: 792 LVVNKWFALQAMSDVPGNVENVRNLLNHPAFDLRNPNKVYSLIKAFCSSLVNFHAKDGSG 851

Query: 860 YKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEI 919
           YKFLGE+VVQLDKINPQVASRMVSAFSRW+R+DETRQNLAKAQLEMI+SANGLSENVFEI
Sbjct: 852 YKFLGEIVVQLDKINPQVASRMVSAFSRWKRYDETRQNLAKAQLEMIVSANGLSENVFEI 911

Query: 920 ASKSLAA 926
           ASKSLAA
Sbjct: 912 ASKSLAA 918

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356511482|ref|XP_003524455.1| PREDICTED: aminopeptidase N-like [Glycine max] Back     alignment and taxonomy information
>gi|224074966|ref|XP_002304505.1| predicted protein [Populus trichocarpa] gi|222841937|gb|EEE79484.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359474189|ref|XP_003631413.1| PREDICTED: LOW QUALITY PROTEIN: aminopeptidase N-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449452464|ref|XP_004143979.1| PREDICTED: aminopeptidase N-like [Cucumis sativus] gi|449495877|ref|XP_004159971.1| PREDICTED: aminopeptidase N-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|12324950|gb|AAG52429.1|AC011622_17 putative aminopeptidase; 4537-10989 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297837009|ref|XP_002886386.1| hypothetical protein ARALYDRAFT_893061 [Arabidopsis lyrata subsp. lyrata] gi|297332227|gb|EFH62645.1| hypothetical protein ARALYDRAFT_893061 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|25289686|pir||G96662 probable aminopeptidase F24D7.4 [imported] - Arabidopsis thaliana Back     alignment and taxonomy information
>gi|240254315|ref|NP_001117543.4| Peptidase M1 family protein [Arabidopsis thaliana] gi|332196024|gb|AEE34145.1| Peptidase M1 family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|334183611|ref|NP_001185303.1| Peptidase M1 family protein [Arabidopsis thaliana] gi|332196026|gb|AEE34147.1| Peptidase M1 family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query926
TIGR_CMR|CBU_0338901 CBU_0338 "aminopeptidase N" [C 0.947 0.973 0.448 1.5e-207
TIGR_CMR|GSU_0304877 GSU_0304 "aminopeptidase N" [G 0.920 0.971 0.449 1.2e-202
UNIPROTKB|P04825870 pepN [Escherichia coli K-12 (t 0.919 0.978 0.462 3.1e-202
TIGR_CMR|VC_1494868 VC_1494 "aminopeptidase N" [Vi 0.919 0.980 0.455 2.8e-201
TIGR_CMR|CPS_2808872 CPS_2808 "aminopeptidase N" [C 0.896 0.951 0.411 7.4e-169
TIGR_CMR|SPO_2841850 SPO_2841 "aminopeptidase N" [R 0.888 0.968 0.411 3.2e-168
TIGR_CMR|SO_2600849 SO_2600 "aminopeptidase N" [Sh 0.682 0.744 0.454 1.8e-149
GENEDB_PFALCIPARUM|MAL13P1.561085 MAL13P1.56 "m1-family aminopep 0.830 0.708 0.352 7.3e-130
UNIPROTKB|O969351085 O96935 "M1 family aminopeptida 0.830 0.708 0.352 7.3e-130
UNIPROTKB|Q8IEK11085 MAL13P1.56 "M1-family aminopep 0.830 0.708 0.352 7.3e-130
TIGR_CMR|CBU_0338 CBU_0338 "aminopeptidase N" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
 Score = 2007 (711.6 bits), Expect = 1.5e-207, P = 1.5e-207
 Identities = 405/904 (44%), Positives = 564/904 (62%)

Query:    34 LVCSVATESVPKEAQESKMDQPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVF 93
             L C ++ E+   +    K   P+ ++LKDY+  ++  DTV L F L EE+T V + + + 
Sbjct:    11 LQCQISFETAEPKMSNQK---PRTVYLKDYRPSDFLVDTVHLYFDLHEEETHVKTILNLQ 67

Query:    94 PRVEGSSS-PLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEI 152
                EG+++ PL L G+ + L  + ++G  L   DY LD+  LT+ + PN  FTLE    I
Sbjct:    68 RNPEGNATAPLALTGEAMTLKKVALDGQTLASSDYTLDASSLTIANVPN-EFTLETEVVI 126

Query:   153 YPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSN 212
              PQ+NT L G+YKS GNFCTQCE+ GFR+IT++ DRPD+MA+Y   I ADK+ YP LLSN
Sbjct:   127 KPQENTQLMGLYKSRGNFCTQCESHGFRRITYFLDRPDVMARYTTTITADKNKYPFLLSN 186

Query:   213 GNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQ 272
             GNLIE   L   RH+A WEDP KKPCYLFALVAG  +  +D FVT+SGR+++LR++    
Sbjct:   187 GNLIETKILSDNRHWAHWEDPSKKPCYLFALVAGDFDLLEDTFVTQSGREIALRLYLEKG 246

Query:   273 DLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLA 332
                +   ++ +LK AM+WDE  FG EYDLD++ IVAV DFNMGAMENK LNIFN+K +LA
Sbjct:   247 FKDQGPFSLAALKKAMRWDEKRFGREYDLDIYMIVAVSDFNMGAMENKGLNIFNTKYILA 306

Query:   333 SPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRT 392
             +P++A+D +Y AI  VIGHEYFHNW+GNRVTCRDWFQ++LKEGLTVFR+Q F+ D  S+ 
Sbjct:   307 NPQSATDDNYVAIESVIGHEYFHNWSGNRVTCRDWFQITLKEGLTVFREQLFTEDTTSKG 366

Query:   393 VKRIADVSKLRNYQFPQDAGPMAHPVRPHSYI------------KGAEVVRMYKTLLGSQ 440
             V RI  V+ LRN QFP+DAGPMAHP+RP SYI            KG+EV+RM +TLLG  
Sbjct:   367 VARIGTVNILRNSQFPEDAGPMAHPIRPRSYIEVNNFYTTTVYNKGSEVIRMVQTLLGEA 426

Query:   441 GFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAET 500
              FRK MDLYF R+DGQAVT E+F  AM DA+      F  WY QAGTP L + S Y+A  
Sbjct:   427 LFRKAMDLYFSRYDGQAVTTENFIQAMEDASGKNLEQFKRWYDQAGTPVLDLNSEYNAND 486

Query:   501 RTYSLEFGQEVPSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPV 560
             +T +L   Q  P TPGQ  K P  +P+ +G +    +DMP          Q  G      
Sbjct:   487 KTLTLTVKQSCPPTPGQSEKLPFHLPLTLGFVGPECQDMPT---------QLAGEKKAIP 537

Query:   561 YTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRW 620
              T VL +   E EF F +++ +P  S+LRG+SAP+R                    F R+
Sbjct:   538 GTRVLEIKDAETEFKFVNVNHKPTLSLLRGFSAPVRLNYPYSDEELVWLFQCDSDPFARY 597

Query:   621 EAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEI 680
             EAGQ+ A++L+  L+ D  Q KPL ++ +F+   R ++     D  + A  + LP    +
Sbjct:   598 EAGQIFAQRLIFKLIDDSYQGKPLKIDERFIDAHRKIIAGPHRDHWYEAALLQLPSINYL 657

Query:   681 MDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIA 740
             M +M+  D +A+H +R F++K L++ L  +     E+++    Y +   ++ +R LKNI 
Sbjct:   658 MQLMKKMDVEALHTIRQFVKKALSNALVDDLKIQYEHHQLP-LYEYTPADIGKRKLKNIC 716

Query:   741 LAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYL 800
             LAYL   +D    ++A +++K + NMT+   AL+A++    K R + LD+FY +W+   L
Sbjct:   717 LAYLTESDDTQFRQVAYQQFKKSDNMTDTVGALSALLNHDCKERHQALDEFYQQWKDQPL 776

Query:   801 VVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGY 860
             VVNKW  L A S +P  +E V++L  HPAFD++NPN VYSL+G F  + V  H   G GY
Sbjct:   777 VVNKWLMLHASSTLPSTLEAVRKLTKHPAFDVKNPNNVYSLLGTFGANAVCFHEGSGEGY 836

Query:   861 KFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIA 920
             + + + V+ +D  NPQVA+R++   +RW+  D+ RQ L KA+L  I  A  LS +V+EI 
Sbjct:   837 RLIADYVLAIDPANPQVAARVLQPLTRWQMMDKKRQELMKAELNRIAKAERLSSDVYEIV 896

Query:   921 SKSL 924
             +KSL
Sbjct:   897 TKSL 900
GO:0004177 "aminopeptidase activity" evidence=ISS
GO:0006508 "proteolysis" evidence=ISS
TIGR_CMR|GSU_0304 GSU_0304 "aminopeptidase N" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|P04825 pepN [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1494 VC_1494 "aminopeptidase N" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2808 CPS_2808 "aminopeptidase N" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2841 SPO_2841 "aminopeptidase N" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2600 SO_2600 "aminopeptidase N" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|MAL13P1.56 MAL13P1.56 "m1-family aminopeptidase" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|O96935 O96935 "M1 family aminopeptidase" [Plasmodium falciparum FcB1/Columbia (taxid:186763)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IEK1 MAL13P1.56 "M1-family aminopeptidase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P45274AMPN_HAEIN3, ., 4, ., 1, 1, ., 20.46040.91790.9781yesno
P37893AMPN_CAUCR3, ., 4, ., 1, 1, ., 20.43580.91680.9837yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.110.921
3rd Layer3.4.11.20.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query926
cd09600861 cd09600, M1_APN_1, Peptidase M1 family containing 0.0
PRK14015875 PRK14015, pepN, aminopeptidase N; Provisional 0.0
TIGR02414863 TIGR02414, pepN_proteo, aminopeptidase N, Escheric 0.0
COG0308859 COG0308, PepN, Aminopeptidase N [Amino acid transp 0.0
pfam11940365 pfam11940, DUF3458, Domain of unknown function (DU 1e-180
cd09595407 cd09595, M1, Peptidase M1 family contains aminopep 7e-75
pfam01433390 pfam01433, Peptidase_M1, Peptidase family M1 1e-60
cd09601446 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f 2e-43
cd09602438 cd09602, M1_APN_3, Peptidase M1 family containing 5e-40
cd09603415 cd09603, M1_APN_4, Peptidase M1 family Aminopeptid 3e-39
TIGR02412831 TIGR02412, pepN_strep_liv, aminopeptidase N, Strep 1e-24
TIGR02411602 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola 1e-19
cd09599442 cd09599, M1_LTA4H, Peptidase M1 family contains le 5e-18
pfam13485128 pfam13485, Peptidase_MA_2, Peptidase MA superfamil 9e-11
cd09604435 cd09604, M1_APN_5, Peptidase M1 family containing 1e-10
>gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information 
 Score = 1485 bits (3847), Expect = 0.0
 Identities = 547/875 (62%), Positives = 658/875 (75%), Gaps = 26/875 (2%)

Query: 62  DYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIE 121
           DYK P+Y    VDL F L EEKTIV+S + V     GS +PLVLDG+DLKLVSIK+NG  
Sbjct: 1   DYKPPDYLIPKVDLDFDLDEEKTIVTSTLQVVRN-GGSGAPLVLDGEDLKLVSIKINGEP 59

Query: 122 LKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRK 181
           L+EG+Y LDS  LT+ S P   FTLEI TEI P +NT+LEG+YKS G FCTQCEAEGFR+
Sbjct: 60  LEEGEYQLDSESLTISSLPPDKFTLEIETEIDPAENTALEGLYKSGGIFCTQCEAEGFRR 119

Query: 182 ITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDPFKKPCYLF 241
           IT+Y DRPD+M+K+   IEADK+ YPVLLSNGNL+E G LE GRH+A+WEDPF KPCYLF
Sbjct: 120 ITYYLDRPDVMSKFTVRIEADKTKYPVLLSNGNLVEEGELEDGRHFAVWEDPFPKPCYLF 179

Query: 242 ALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDL 301
           ALVAG L   +D F T+SGRKV+L I+    D  K AHAM SLK +MKWDED FGLEYDL
Sbjct: 180 ALVAGDLGVLEDKFTTKSGRKVALEIYVEPGDESKCAHAMESLKKSMKWDEDRFGLEYDL 239

Query: 302 DLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNR 361
           DLFNIVAV DFNMGAMENK LNIFNSKLVLA PETA+DADY  I  VIGHEYFHNWTGNR
Sbjct: 240 DLFNIVAVDDFNMGAMENKGLNIFNSKLVLADPETATDADYERIESVIGHEYFHNWTGNR 299

Query: 362 VTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPH 421
           VTCRDWFQLSLKEGLTVFRDQEFS+DMGSR VKRI DV  LR +QFP+DAGPMAHP+RP 
Sbjct: 300 VTCRDWFQLSLKEGLTVFRDQEFSADMGSRAVKRIEDVRFLRAHQFPEDAGPMAHPIRPD 359

Query: 422 SYI------------KGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRD 469
           SYI            KGAEV+RMY TLLG +GFRKGMDLYF+RHDGQAVTCEDF AAM D
Sbjct: 360 SYIEMNNFYTATVYEKGAEVIRMYHTLLGEEGFRKGMDLYFQRHDGQAVTCEDFVAAMED 419

Query: 470 ANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAI 529
           AN  + + F  WYSQAGTP++ V S+Y AE +T++L   Q  P TPGQP K+P+ IP+A+
Sbjct: 420 ANGVDLSQFRRWYSQAGTPKVTVKSAYDAEAKTFTLTLSQSTPPTPGQPEKKPLHIPIAV 479

Query: 530 GLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILR 589
           GLL+++GKD+PL      G             TTVL +TK E+ FVF  ++E+P+PS+LR
Sbjct: 480 GLLDANGKDLPLQ-----GGGLGT--------TTVLELTKAEQTFVFDGVAEKPVPSLLR 526

Query: 590 GYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPK 649
           G+SAP++LE DLSD DL FLLA+DSD FNRWEAGQ LARKL+L+LV +FQQ +PL ++ K
Sbjct: 527 GFSAPVKLEYDLSDDDLAFLLAHDSDAFNRWEAGQTLARKLLLALVREFQQGQPLPVDEK 586

Query: 650 FVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKA 709
           F+   RS+L D +LD  F A  ++LP E EI + MEV DPDA+H  R  + KQLA+ELK 
Sbjct: 587 FIDALRSLLTDPTLDPAFKALLLSLPSENEIAERMEVIDPDAIHEAREALIKQLATELKD 646

Query: 710 EFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQ 769
           E L   E NR   EY  +   +ARRALKN  L+YLA+LED +I  LA+ ++ +A+NMT+ 
Sbjct: 647 ELLELYEENRKNEEYSVDAEAIARRALKNTCLSYLAALEDPEITALAVAQFNSASNMTDA 706

Query: 770 FAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPA 829
            AAL+A+VQ     RD  LDDFY KW+ D LV++KWFALQA S  P  +E V+ LL HPA
Sbjct: 707 LAALSALVQIDSPERDAALDDFYDKWKDDPLVLDKWFALQASSPRPNVLETVKALLQHPA 766

Query: 830 FDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWR 889
           FD++NPN+V SLIGGF  +    HAKDGSGYKFL + +++LDK NPQVA+R+V AFSRW+
Sbjct: 767 FDIKNPNRVRSLIGGFASNNPAFHAKDGSGYKFLADKIIKLDKFNPQVAARLVEAFSRWK 826

Query: 890 RFDETRQNLAKAQLEMIMSANGLSENVFEIASKSL 924
           + DE RQ+L KA LE I++A GLS+NV+EI SK L
Sbjct: 827 KLDEPRQSLMKAALERILAAPGLSKNVYEIVSKIL 861

This family contains aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease belonging to the M1 gluzincin family. It includes bacterial-type alanyl aminopeptidases as well as PfA-M1 aminopeptidase (Plasmodium falciparum-type). APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets, Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 861
>gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional Back     alignment and domain information
>gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type Back     alignment and domain information
>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|221331 pfam11940, DUF3458, Domain of unknown function (DUF3458) Back     alignment and domain information
>gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 Back     alignment and domain information
>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) Back     alignment and domain information
>gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N Back     alignment and domain information
>gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily Back     alignment and domain information
>gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 926
TIGR02414863 pepN_proteo aminopeptidase N, Escherichia coli typ 100.0
PRK14015875 pepN aminopeptidase N; Provisional 100.0
COG0308859 PepN Aminopeptidase N [Amino acid transport and me 100.0
KOG1046882 consensus Puromycin-sensitive aminopeptidase and r 100.0
PF11940367 DUF3458: Domain of unknown function (DUF3458); Int 100.0
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 100.0
TIGR02411601 leuko_A4_hydro leukotriene A-4 hydrolase/aminopept 100.0
PF01433390 Peptidase_M1: Peptidase family M1 This is family M 100.0
KOG1047613 consensus Bifunctional leukotriene A4 hydrolase/am 100.0
KOG1932 1180 consensus TATA binding protein associated factor [ 100.0
COG3975558 Predicted protease with the C-terminal PDZ domain 99.29
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 99.25
PF13485128 Peptidase_MA_2: Peptidase MA superfamily 99.04
PF05299122 Peptidase_M61: M61 glycyl aminopeptidase; InterPro 97.26
PF10460366 Peptidase_M30: Peptidase M30; InterPro: IPR019501 97.02
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 94.72
PF07607128 DUF1570: Protein of unknown function (DUF1570); In 92.84
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 92.64
PF10026195 DUF2268: Predicted Zn-dependent protease (DUF2268) 91.48
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 87.92
PRK13800897 putative oxidoreductase/HEAT repeat-containing pro 87.76
KOG1046882 consensus Puromycin-sensitive aminopeptidase and r 86.63
PRK04860160 hypothetical protein; Provisional 82.78
smart00731146 SprT SprT homologues. Predicted to have roles in t 80.31
>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type Back     alignment and domain information 
Probab=100.00  E-value=2.5e-187  Score=1691.25  Aligned_cols=850  Identities=56%  Similarity=0.954  Sum_probs=804.7

Q ss_pred             CCCCCCcceEEEEEEEEECCCeEEEEEEEEEEEeccCCCCcEEEEcCCcEEEEEEEcCeEecccceEecCCEEEEECCCC
Q 036603           62 DYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEGDYHLDSRHLTLQSPPN  141 (926)
Q Consensus        62 ~y~~p~~~~~~~~L~~~l~~~~~~v~g~i~i~~~~~~~~~~l~L~~~~L~I~~v~i~G~~l~~~~y~~~~~~L~I~l~~~  141 (926)
                      ||++|+|.+.||+|+|+++++.++++|+++|+++...+.+.|+||+.+|+|.+|++||+.+....|+.+++.|+|...+ 
T Consensus         1 dy~~~~~~v~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~~~l~Ld~~~L~I~sV~v~g~~~~~~~~~~~~~~L~I~~~~-   79 (863)
T TIGR02414         1 DYKPPPFLIEKTHLDFDLHEEETVVRARLTVRRNPDGNGAPLVLDGEELKLLSIAIDGKPLAAGDYQLDDETLTIASVP-   79 (863)
T ss_pred             CCCCCCceEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCCcEEEEecCCEEEEEEECCEecCcceEEEcCCEEEEeeCC-
Confidence            7999999999999999999999999999999988654567899999999999999999887545688899999999755 


Q ss_pred             CeEEEEEEEEEeeccCCCCCceEeeCCeEEeccccCCcceeeccCCCCCCceeEEEEEEEcCCCceEEecCCccccceec
Q 036603          142 GAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNL  221 (926)
Q Consensus       142 ~~~~L~I~~~~~p~~~~~~~Gly~s~~~~~Tq~ep~~aR~~fPc~DeP~~katf~l~I~~p~~~~~v~lSNG~l~~~~~~  221 (926)
                      +.++|+|.|.++|..++.+.|+|+++++++|||||+|||++|||+|+|++||+|+++|++|++.|++++|||++++..+.
T Consensus        80 ~~~~l~i~~~~~p~~n~~l~GlY~s~~~~~TQ~Ep~gaR~ifpc~DeP~~kAtf~vtI~~p~~~y~v~lSNg~~~~~~~~  159 (863)
T TIGR02414        80 ESFTLEIETEIHPEENTSLEGLYKSGGNFCTQCEAEGFRRITYFPDRPDVMSRYTVTITADKKKYPVLLSNGNKIASGEL  159 (863)
T ss_pred             ccEEEEEEEEeecccCCCCeEEEEeCCeEEEEecCCCCCcCCCCCCCCCCceEEEEEEEECCCcceEEEeCCccccceec
Confidence            57999999999999999999999999999999999999999999999999999999999998756688999999888777


Q ss_pred             cCCeEEEEEeCCcccccceeeeEeccceeEEeeeeecCCceEEEEEEccCCChhhHHHHHHHHHHHHHHHHHHhCCCCCC
Q 036603          222 EGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDL  301 (926)
Q Consensus       222 ~~g~~~~~f~~~~p~ptyl~a~~vG~f~~~~~~~~t~~g~~v~l~vy~~~~~~~~~~~al~~~~~~l~~~e~~fG~~YP~  301 (926)
                      .+|+++++|+.++|||+|+|||++|+|+++++.+++.+|++|++++|++|+..++++++++.++++|+|||++||+|||+
T Consensus       160 ~~g~~~~~f~~t~pmptYLfA~vaGdf~~~~~~~~t~sg~~v~l~iy~~p~~~~~~~~al~~~~~~L~~~E~~fG~pYPl  239 (863)
T TIGR02414       160 PDGRHWAEWEDPFPKPSYLFALVAGDLDVLEDTFTTKSGREVALRVYVEEGNKDKCDHAMESLKKAMKWDEEVFGLEYDL  239 (863)
T ss_pred             CCCeEEEEEeCCCCcChhHheEEEeCCEEEEEEeeccCCCceEEEEEEccCcHHHHHHHHHHHHHHHHHHHHHhCCCCCh
Confidence            78999999999999999999999999999998888889999999999999999999999999999999999999999999


Q ss_pred             CcccEEEecCCCCccccccccccccccccccCCCCCChHHHHHHHHHHHHHHHHHhhCCcccccCCCchhHHHHHHHHHH
Q 036603          302 DLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRD  381 (926)
Q Consensus       302 ~k~~iV~vp~f~~gaMEn~Gli~~~~~~ll~~~~~~t~~~~~~i~~viaHElaHqWfGn~Vt~~~w~dlWL~EGfAty~~  381 (926)
                      +||++|++|+|++||||||||++|++.+++.++...++.+++.+..+|+||++||||||+|||+||+++|||||||+|++
T Consensus       240 ~k~diVavpdf~~GaMEN~GLi~f~e~~lL~~~~~~td~~~~~i~~VIaHElaHqWfGNlVT~~~W~~LWLnEGfAty~e  319 (863)
T TIGR02414       240 DIFMIVAVDDFNMGAMENKGLNIFNSKYVLADPETATDADYERIESVIAHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRD  319 (863)
T ss_pred             hhccEEecCCCCCccccccceeccccceEEeCCCCCCHHHHHHHHHHHHHHHHHHHhcceeeecchhhhhhhhhHHHHHH
Confidence            99999999999999999999999999999999988888889999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCHHHHHHHHHHHhhhccCCCCCCCCCCCCCc------------cccchHHHHHHHHHHhhCHHHHHHHHHHH
Q 036603          382 QEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRP------------HSYIKGAEVVRMYKTLLGSQGFRKGMDLY  449 (926)
Q Consensus       382 ~~~~~~~~~~~~~r~~~~~~l~~~~~~~D~~~~~~pi~~------------~~Y~KGa~vl~ML~~~lG~e~F~~~lr~Y  449 (926)
                      ++|..++.+....++.++..++..++.+|+++++||+++            ++|.||++|||||+.+||++.|++||+.|
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~lr~~~f~~D~~p~~~Pi~~~~~~~i~~~y~~i~Y~KGA~vLrML~~~LGee~F~~gLr~Y  399 (863)
T TIGR02414       320 QEFSADMTSRAVKRIEDVRLLRAHQFPEDAGPMAHPVRPESYVEINNFYTATVYEKGAEVIRMLHTLLGEEGFRKGMDLY  399 (863)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHhhhhcccccccCCCCCCcchhhHHhccchHHhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            999998887777778777777777889999999999853            57999999999999999999999999999


Q ss_pred             HHhcCCCCCCHHHHHHHHHHhcCcChHHHHHHHhcCCcceEEEEEEeecCCcEEEEEEEEecCCCCCCCCCcceEEEEEE
Q 036603          450 FKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKEPMFIPVAI  529 (926)
Q Consensus       450 l~~~~~~~~t~~Df~~~le~~sg~dL~~f~~W~~q~G~P~l~V~~~~~~~~~~~~l~l~Q~~~~~~~~~~~~~~~iPv~i  529 (926)
                      +++|++++++++||+++|++++|.|+++|++|++|+|+|.|+|+.+|+.+++.++|+++|.+++.++++++.+|+|||.+
T Consensus       400 l~r~~~~~at~~Df~~ale~asg~dL~~f~~W~~q~G~P~v~v~~~yd~~~~~~~lt~~Q~~~~~~~~~~~~~~~iPl~i  479 (863)
T TIGR02414       400 FSRHDGQAVTCEDFVAAMEDASGRDLNQFRRWYSQAGTPVLEVKENYDAAKKTYTLTVRQSTPPTPGQTEKKPLHIPIAV  479 (863)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHhCCCHHHHHHHHcCCCCceeEEEEEEcCCCCEEEEEEEEeCCCCCCCCcCCceEEEEEE
Confidence            99999999999999999999999999999999999999999999999988888999999999887788889999999999


Q ss_pred             EEEcCCCCccccceeecCCcccccCCCCCCcceEEEEEcCCccEEEEccCCCCCchhhhccCCCCeeecCCCCHHHHHhh
Q 036603          530 GLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFL  609 (926)
Q Consensus       530 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ln~~~~~f~~~~~~~~p~~sllr~fsapv~~~~~~~~~~l~~l  609 (926)
                      ++.+.+|+.+...   ++|..         ..+.++.+++.+++|+|.+++++|++|++|+||+||++.+++++++|++|
T Consensus       480 ~l~~~~G~~~~~~---~~~~~---------~~~~~l~l~~~~~~f~f~~~~~~p~~sl~r~fsapv~l~~~~~~~~l~~l  547 (863)
T TIGR02414       480 GLLGPNGRKLMLS---LDGER---------DTTRVLELTEAEQTFVFEGIAEKPVPSLLRGFSAPVNLEYPYSDEDLLLL  547 (863)
T ss_pred             EEEeCCCCEeeec---ccCCC---------CcceEEEEccCEEEEEEcCCCCCCeeeecCCCCceEEEeCCCCHHHHHHH
Confidence            9999999876643   33321         01357999999999999999999999999999999999999999999999


Q ss_pred             HhcCCChhhHHHHHHHHHHHHHHHHHHhhccCCCCCCChhHHHHHHHHhcCCCCCHHHHHHHhCCCCHHHHHhhcccCCH
Q 036603          610 LANDSDEFNRWEAGQVLARKLMLSLVADFQQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADP  689 (926)
Q Consensus       610 l~~d~D~f~r~~Ag~~l~~~~~l~l~~~~~~e~~~~v~~~~~~~l~~~~~~~~~~~~~~a~~l~lp~~~~l~~~~~~~dp  689 (926)
                      ++||+|+||||+|+|.|+.+.++.++..+..+.+..+.+.++++++.+|.+..+|++|+|++|+||++++|+++++.+||
T Consensus       548 ~~~d~d~~~r~~a~q~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~a~~l~lp~~~~l~~~~~~~d~  627 (863)
T TIGR02414       548 LAHDSDPFNRWEAGQRLARRVILANIARAQGGEELPVDPAFIDALGKLLNDPHLDAAFKALLLALPSEAYLAELMENIDP  627 (863)
T ss_pred             HhhCCChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCHHHHHHHhcCCCHHHHHHHccCCCH
Confidence            99999999999999999999999999877666677788999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHhHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHhCCChhHH
Q 036603          690 DAVHAVRTFIRKQLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYKTATNMTEQ  769 (926)
Q Consensus       690 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~a~nmtd~  769 (926)
                      ++||.||++++++||.+++++|.++|+++...++|+++++++|+|+|||+||+||+..++++..++|.+||++|+||||+
T Consensus       628 ~~i~~~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~l~n~~l~~l~~~~~~~~~~~~~~~~~~a~~mtd~  707 (863)
T TIGR02414       628 DALHAAREFLRAAIARQLADDLLRLYDALQENGPYSVDPAAAGRRALRNACLSYLSAADDAEIRNLALEQFKSADNMTDR  707 (863)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHhCCCHHHH
Confidence            99999999999999999999999999998766779999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCcchHHHHHHHHHHhcCCchHHHHHHHHhhcccCCCChHHHHHHHhcCCCCCCCCCcchhhhhhhcc-CC
Q 036603          770 FAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFC-GS  848 (926)
Q Consensus       770 ~~al~~l~~~~~~~~~~~l~~f~~~~~~~~l~~~kw~~~~a~~~~~~~~~~v~~l~~~~~f~~~~pn~~r~l~~~f~-~n  848 (926)
                      ++||++|+++++++|+++|++||++|++|||||||||++||++++++++++|++|++||+|+++||||||||||+|| +|
T Consensus       708 ~~al~~l~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa~~~~~~~~~~v~~l~~h~~f~~~npn~~ral~~~f~~~n  787 (863)
T TIGR02414       708 LAALSALVHFESDFRERALAAFYQKWKDDPLVMDKWFALQATSPRPDTLERVKALLQHPAFDLKNPNRVRALIGAFANNN  787 (863)
T ss_pred             HHHHHHHhcCCChhHHHHHHHHHHHHCCCchhHHHHHHHHhCCCcccHHHHHHHHhcCCCCCcCCCcHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998 89


Q ss_pred             CcccccCCCchhHHHHHHHHHhhhcChhHHhhhhhHhhhhhccCHHHHHHHHHHHHHHHhccCCCccHHHHHHhhh
Q 036603          849 PVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSL  924 (926)
Q Consensus       849 ~~~fh~~~g~gy~~~~~~~~~~~~~np~~a~r~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ls~~~~e~~~~~l  924 (926)
                      |.+||++||+||+||||+|++||++||||||||+++|++|+||+++||++|+++|+||++.++||+||+|||+|+|
T Consensus       788 ~~~fh~~~g~gy~~~~~~i~~ld~~Np~~aarl~~~~~~w~~~~~~r~~~m~~~l~~i~~~~~ls~d~~e~~~~~l  863 (863)
T TIGR02414       788 LVRFHDISGSGYRFLADQIIAIDRFNPQVAARLLEPLTRWRKLDPKRQELMKAALERIAAEENLSKDVREVVSKLL  863 (863)
T ss_pred             cccccCCCCcHHHHHHHHHHHhcCcCHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHhCcCCCccHHHHHHhhC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999997

The M1 family of zinc metallopeptidases contains a number of distinct, well-separated clades of proteins with aminopeptidase activity. Several are designated aminopeptidase N, EC 3.4.11.2, after the Escherichia coli enzyme, suggesting a similar activity profile. This family consists of all aminopeptidases closely related to E. coli PepN and presumed to have similar (not identical) function. Nearly all are found in Proteobacteria, but members are found also in Cyanobacteria, plants, and apicomplexan parasites. This family differs greatly in sequence from the family of aminopeptidases typified by Streptomyces lividans PepN (TIGR02412), from the membrane bound aminopeptidase N family in animals, etc.
>PRK14015 pepN aminopeptidase N; Provisional Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification Back     alignment and domain information
>KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] Back     alignment and domain information
>KOG1932 consensus TATA binding protein associated factor [Transcription] Back     alignment and domain information
>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] Back     alignment and domain information
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
>PF13485 Peptidase_MA_2: Peptidase MA superfamily Back     alignment and domain information
>PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria Back     alignment and domain information
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK04860 hypothetical protein; Provisional Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query926
2dq6_A870 Crystal Structure Of Aminopeptidase N From Escheric 0.0
2hpo_A891 Structure Of Aminopeptidase N From E. Coli Suggests 0.0
3puu_A891 Crystal Structure Of Glu121gln Mutant Of E. Coli Am 0.0
2gtq_A867 Crystal Structure Of Aminopeptidase N From Human Pa 0.0
3q43_A891 X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin 1e-154
3ebi_A890 Structure Of The M1 Alanylaminopeptidase From Malar 1e-154
3ebg_A889 Structure Of The M1 Alanylaminopeptidase From Malar 1e-154
3t8v_A895 A Bestatin-Based Chemical Biology Strategy Reveals 1e-154
1gw6_A610 Structure Of Leukotriene A4 Hydrolase D375n Mutant 3e-19
3u9w_A608 Structure Of Human Leukotriene A4 Hydrolase In Comp 3e-19
2r59_A616 Leukotriene A4 Hydrolase Complexed With Inhibitor R 3e-19
3cho_A610 Crystal Structure Of Leukotriene A4 Hydrolase In Co 3e-19
1hs6_A611 Structure Of Leukotriene A4 Hydrolase Complexed Wit 3e-19
1sqm_A610 Structure Of [r563a] Leukotriene A4 Hydrolase Lengt 3e-19
3b7s_A616 [e296q]lta4h In Complex With Rsr Substrate Length = 7e-19
1h19_A611 Structure Of [e271q] Leukotriene A4 Hydrolase Lengt 7e-19
3qnf_A954 Crystal Structure Of The Open State Of Human Endopl 1e-18
4e36_A967 Crystal Structure Of The Human Endoplasmic Reticulu 1e-18
2yd0_A897 Crystal Structure Of The Soluble Domain Of Human En 1e-18
3mdj_A921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 2e-18
3se6_A967 Crystal Structure Of The Human Endoplasmic Reticulu 4e-18
4f5c_A959 Crystal Structure Of The Spike Receptor Binding Dom 4e-17
4h5h_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 4e-17
4fke_A909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 4e-17
4hol_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 1e-16
1z1w_A780 Crystal Structures Of The Tricorn Interacting Facor 1e-14
3q7j_A780 Engineered Thermoplasma Acidophilum F3 Factor Mimic 4e-14
4fyq_A903 Human Aminopeptidase N (Cd13) Length = 903 4e-14
3cia_A605 Crystal Structure Of Cold-Aminopeptidase From Colwe 8e-10
2xq0_A632 Structure Of Yeast Lta4 Hydrolase In Complex With B 2e-06
2xpy_A632 Structure Of Native Leukotriene A4 Hydrolase From S 3e-06
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 Back     alignment and structure 
Iteration: 1

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/885 (45%), Positives = 548/885 (61%), Gaps = 31/885 (3%)
Query: 54  QPKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLV 113
           QP+  +  DY+ P+Y    +DL F L  +KT+V++ ++   R   S +PL L+G+DLKLV
Sbjct: 4   QPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTA-VSQAVRHGASDAPLRLNGEDLKLV 62
Query: 114 SIKVNGIELKEGDYHLDSRHLTLQSPPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQ 173
           S+ +N        +  +   L + + P   FTL+I+ EI P  NT+LEG+Y+S    CTQ
Sbjct: 63  SVHINDEPWTA--WKEEEGALVISNLPE-RFTLKIINEISPAANTALEGLYQSGDALCTQ 119
Query: 174 CEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWEDP 233
           CEAEGFR IT+Y DRPD++A++   I ADK  YP LLSNGN + +G LE GRH+  W+DP
Sbjct: 120 CEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDP 179
Query: 234 FKKPCYLFALVAGQLESRDDIFVTRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKWDED 293
           F KPCYLFALVAG  +   D F TRSGR+V+L ++    +L +   AM SLK +MKWDE+
Sbjct: 180 FPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEE 239
Query: 294 VFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEY 353
            FGLEYDLD++ IVAV  FNMGAMENK LNIFNSK VLA  +TA+D DY  I  VIGHEY
Sbjct: 240 RFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEY 299
Query: 354 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGP 413
           FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSD+GSR V RI +V  +R  QF +DA P
Sbjct: 300 FHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASP 359
Query: 414 MAHPVRPHS------------YIKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCE 461
           MAHP+RP              Y KGAEV+RM  TLLG + F+KGM LYF+RHDG A TC+
Sbjct: 360 MAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCD 419
Query: 462 DFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEVPSTPGQPVKE 521
           DF  AM DA++ + ++F  WYSQ+GTP + V   Y+ ET  Y+L   Q  P+TP Q  K+
Sbjct: 420 DFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQ 479
Query: 522 PMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISE 581
           P+ IP AI L ++ GK +PL    H            PV  +VL VT+ E+ FVF ++  
Sbjct: 480 PLHIPFAIELYDNEGKVIPLQKGGH------------PV-NSVLNVTQAEQTFVFDNVYF 526
Query: 582 RPIPSILRGYSAPIRXXXXXXXXXXXXXXXXXXXEFNRWEAGQVLARKLMLSLVADFQQN 641
           +P+P++L  +SAP++                   +F+RW+A Q L    +   VA  QQ 
Sbjct: 527 QPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQG 586
Query: 642 KPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRK 701
           +PL L       FR++L D  +D    A+ +TLP   E+ ++ ++ DP A+  VR  + +
Sbjct: 587 QPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTR 646
Query: 702 QLASELKAEFLTTVENNRSTGEYVFNHHNMARRALKNIALAYLASLEDADIVELALREYK 761
            LA+EL  E L  + N     EY   H ++A+R L+N  L +LA  E      L  +++ 
Sbjct: 647 TLATELADELL-AIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFH 705
Query: 762 TATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDIPGNVECV 821
            A NMT+  AAL+A V      RD ++ ++  KW  + LV++KWF LQA S     +E V
Sbjct: 706 EANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETV 765
Query: 822 QRLLDHPAFDLRNPNKVYSLIGGFCGS-PVNLHAKDGSGYKFLGEMVVQLDKINPQVASR 880
           + LL H +F + NPN++ SLIG F GS P   HA+DGSGY FL EM+  L+  NPQVASR
Sbjct: 766 RGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASR 825
Query: 881 MVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSENVFEIASKSLA 925
           ++    R +R+D  RQ   +A LE +     LS +++E  +K+LA
Sbjct: 826 LIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA 870
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 Back     alignment and structure
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 Back     alignment and structure
>pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 Back     alignment and structure
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 Back     alignment and structure
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 Back     alignment and structure
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 Back     alignment and structure
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 Back     alignment and structure
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 Back     alignment and structure
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 Back     alignment and structure
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 Back     alignment and structure
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 Back     alignment and structure
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 Back     alignment and structure
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 Back     alignment and structure
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 Back     alignment and structure
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 Back     alignment and structure
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 Back     alignment and structure
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 Back     alignment and structure
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query926
3ebh_A889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 0.0
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 0.0
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 0.0
3b7s_A616 Leukotriene A-4 hydrolase; transition state, analo 7e-50
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 3e-49
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 2e-46
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 1e-41
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 2e-40
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 6e-40
4fgm_A597 Aminopeptidase N family protein; structural genomi 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 Back     alignment and structure
 Score = 1123 bits (2907), Expect = 0.0
 Identities = 314/909 (34%), Positives = 484/909 (53%), Gaps = 61/909 (6%)

Query: 55  PKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVS 114
           PK  + KDYK   +  + V L  ++ +++TIV S + +          LV DG  LK+  
Sbjct: 1   PKIHYRKDYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINE 60

Query: 115 IKVNGIELKEG-DYHLDSRHLTLQSP--PNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFC 171
           I +N  +L EG +Y  D+  LT+ S   P   F       I+P+ N +L G+YKS     
Sbjct: 61  ISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKSKNIIV 120

Query: 172 TQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLSNGNLIERGNLEGGRHYALWE 231
           +QCEA GFR+ITF+ DRPD+MAKY   + ADK  YPVLLSNG+ +    + GGRH A + 
Sbjct: 121 SQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARFN 180

Query: 232 DPFKKPCYLFALVAGQLESRDDIFV-TRSGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKW 290
           DP  KPCYLFA+VAG L+     ++   + +KV L +++  + + K   A+  LK +M +
Sbjct: 181 DPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAF 240

Query: 291 DEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIG 350
           DED FGLEYDL   N+VAV DFN+GAMENK LNIFN+  +LAS + + D  YA IL V+G
Sbjct: 241 DEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVG 300

Query: 351 HEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQD 410
           HEYFH +TGNRVT RDWFQL+LKEGLTV R+  FS +M      R++ V  LR+ QF +D
Sbjct: 301 HEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLED 360

Query: 411 AGPMAHPVRPHSYI------------KGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAV 458
           + P++HP+RP SY+            KG+EV+RMY T+LG + ++KG D+Y K++DG   
Sbjct: 361 SSPLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNTA 420

Query: 459 TCEDFFAAMRDA-------NDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEV 511
           TCEDF  AM  A       N A    +LLW+SQ+GTP +    +Y AE + YS+   Q  
Sbjct: 421 TCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYT 480

Query: 512 PSTPGQPVKEPMFIPVAIGLLNSSGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKE 571
                Q  K+P+FIP+++GL+N       +                     T L +TK+ 
Sbjct: 481 KPDENQKEKKPLFIPISVGLINPENGKEMI-------------------SQTTLELTKES 521

Query: 572 EEFVFSDISERPIPSILRGYSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLM 631
           + FVF++I+ +PIPS+ RG+SAP+ +E  L+D +   LL  DSD F R+ +   +  K +
Sbjct: 522 DTFVFNNIAVKPIPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMKQI 581

Query: 632 LSLVADF--------QQNKPLVLNPKFVHGFRSMLGDSSLDKEFIAKAITLPGEGEIMDM 683
           L    +F        +  +   +N +F+   + +L D   D  F +  ++LP +  I++ 
Sbjct: 582 LMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHADAGFKSYIVSLPQDRYIINF 641

Query: 684 MEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTG--------EYVFNHHNMARRA 735
           +   D D +   + +I KQ+  +L   +    ++  +          E   +   M  R 
Sbjct: 642 VSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHVDFDQMNMRT 701

Query: 736 LKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKW 795
           L+N  L+ L+  +  +I+   + E+  +   +    +L+           E+ D  Y   
Sbjct: 702 LRNTLLSLLSKAQYPNILNEII-EHSKSPYPSNWLTSLSVSAYFDK--YFELYDKTYKLS 758

Query: 796 QHDYLVVNKWFALQAMSDIPGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAK 855
           + D L++ +W    + SD     E +++L +    D +NPN + ++   F  +    H  
Sbjct: 759 KDDELLLQEWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDI 818

Query: 856 DGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDETRQNLAKAQLEMIMSANGLSEN 915
            G GYK + E++ + DK NP VA+++   F  W + D  RQ L   ++  ++    +S N
Sbjct: 819 SGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNKLDTKRQELMLNEMNTMLQEPQISNN 878

Query: 916 VFEIASKSL 924
           + E   +  
Sbjct: 879 LKEYLLRLT 887
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 Back     alignment and structure
>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query926
3ebh_A889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 100.0
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 100.0
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 100.0
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 100.0
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 100.0
4fke_A909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 100.0
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 100.0
3u9w_A608 Leukotriene A-4 hydrolase; hydrolase-hydrolase inh 100.0
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 100.0
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 100.0
4fgm_A597 Aminopeptidase N family protein; structural genomi 99.97
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 99.81
4fke_A909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 87.04
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 83.08
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Back     alignment and structure
Probab=100.00  E-value=2.4e-184  Score=1679.25  Aligned_cols=848  Identities=37%  Similarity=0.651  Sum_probs=794.5

Q ss_pred             CcccccCCCCCCCcceEEEEEEEEECCCeEEEEEEEEEEEeccCCCCcEEEEcCCcEEEEEEEcCeEeccc-ceEecCCE
Q 036603           55 PKEIFLKDYKMPNYYFDTVDLKFSLGEEKTIVSSKITVFPRVEGSSSPLVLDGQDLKLVSIKVNGIELKEG-DYHLDSRH  133 (926)
Q Consensus        55 p~~~~~~~y~~p~~~~~~~~L~~~l~~~~~~v~g~i~i~~~~~~~~~~l~L~~~~L~I~~v~i~G~~l~~~-~y~~~~~~  133 (926)
                      |+.++++||++|+|++.||+|++++++++.+++|+++|+.+...+.+.|+||+.+|+|.+|++||+++... .|..+++.
T Consensus         1 ~~~~~~~dy~~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~~l~~~~~~~~~~~~   80 (889)
T 3ebh_A            1 PKIHYRKDYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEF   80 (889)
T ss_dssp             CCCEEGGGCCCCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTEECCBTTTEEECSSE
T ss_pred             CCceeCCCCCCCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCEEcCcccceEecCCE
Confidence            56689999999999999999999999999999999999987655568899999999999999999987422 58899999


Q ss_pred             EEEEC--CCCCeEEEEEEEEEeeccCCCCCceEeeCCeEEeccccCCcceeeccCCCCCCceeEEEEEEEcCCCceEEec
Q 036603          134 LTLQS--PPNGAFTLEIVTEIYPQKNTSLEGIYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYKCYIEADKSLYPVLLS  211 (926)
Q Consensus       134 L~I~l--~~~~~~~L~I~~~~~p~~~~~~~Gly~s~~~~~Tq~ep~~aR~~fPc~DeP~~katf~l~I~~p~~~~~v~lS  211 (926)
                      |+|.+  .+++.++|+|.|+++|..++.+.|+|+++++++|||||.+||+||||||+|++||+|+++|++|++.|++++|
T Consensus        81 L~I~l~~l~~~~~~l~I~y~~~p~~~~~l~Gly~s~~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~~~valS  160 (889)
T 3ebh_A           81 LTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKSKNIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLS  160 (889)
T ss_dssp             EEECGGGSCSSSEEEEEEEEECGGGCTTCSEEEEETTEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTTCCEEEE
T ss_pred             EEEecCCCCCCcEEEEEEEEecCccCCCceeeEEECCeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEccccCeEEEc
Confidence            99975  3457899999999998888889999999999999999999999999999999999999999999973457899


Q ss_pred             CCccccceeccCCeEEEEEeCCcccccceeeeEeccceeEEeeeeec-CCceEEEEEEccCCChhhHHHHHHHHHHHHHH
Q 036603          212 NGNLIERGNLEGGRHYALWEDPFKKPCYLFALVAGQLESRDDIFVTR-SGRKVSLRIWTPAQDLPKTAHAMYSLKAAMKW  290 (926)
Q Consensus       212 NG~l~~~~~~~~g~~~~~f~~~~p~ptyl~a~~vG~f~~~~~~~~t~-~g~~v~l~vy~~~~~~~~~~~al~~~~~~l~~  290 (926)
                      ||+++++...++|+++++|+.++|||+|++||++|+|.++++.+++. +|++|++++|++|+..++++++++.++++|+|
T Consensus       161 Ng~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~~~~l~~  240 (889)
T 3ebh_A          161 NGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAF  240 (889)
T ss_dssp             SSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHHHHHHHH
T ss_pred             cCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHHHHHHHH
Confidence            99999887777899999999999999999999999999999877777 88899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCcccEEEecCCCCccccccccccccccccccCCCCCChHHHHHHHHHHHHHHHHHhhCCcccccCCCch
Q 036603          291 DEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQL  370 (926)
Q Consensus       291 ~e~~fG~~YP~~k~~iV~vp~f~~gaMEn~Gli~~~~~~ll~~~~~~t~~~~~~i~~viaHElaHqWfGn~Vt~~~w~dl  370 (926)
                      ||++||+||||+||++|++|+|++|||||||+++|++.++++++...++.+++.+..+|+||+|||||||+|||+||+++
T Consensus       241 ~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~~~W~dl  320 (889)
T 3ebh_A          241 DEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQL  320 (889)
T ss_dssp             HHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEESSGGGH
T ss_pred             HHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeeecccccc
Confidence            99999999999999999999999999999999999999999999888888899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhccCCCCCCCCCCCCCc------------cccchHHHHHHHHHHhhC
Q 036603          371 SLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRP------------HSYIKGAEVVRMYKTLLG  438 (926)
Q Consensus       371 WL~EGfAty~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~D~~~~~~pi~~------------~~Y~KGa~vl~ML~~~lG  438 (926)
                      |||||||+|++++|.+++.+....++.++..++..++.+|.++++||+.+            ++|.||++|||||+..||
T Consensus       321 WLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~~~~~ei~~~f~~i~Y~KGa~vLrML~~~lG  400 (889)
T 3ebh_A          321 TLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILG  400 (889)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSCSEESCGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCCcchhhhhhhccchhhhHHHHHHHHHHHHhC
Confidence            99999999999999999888777777776666666677888899999753            379999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhc-------CcChHHHHHHHhcCCcceEEEEEEeecCCcEEEEEEEEec
Q 036603          439 SQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDAN-------DAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGQEV  511 (926)
Q Consensus       439 ~e~F~~~lr~Yl~~~~~~~~t~~Df~~~le~~s-------g~dL~~f~~W~~q~G~P~l~V~~~~~~~~~~~~l~l~Q~~  511 (926)
                      ++.|++||+.|+++|+|++++++|||++|++++       |.|++.|.+|++|+|+|.|+|+.+|+.+++.++|+|+|++
T Consensus       401 de~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~f~~Wl~q~G~P~l~V~~~~d~~~~~~~ltl~Q~~  480 (889)
T 3ebh_A          401 EEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYT  480 (889)
T ss_dssp             HHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTGGGHHHHCCSCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHHHHHHhcCCCCceEEEEEeecCCCCEEEEEEEEec
Confidence            999999999999999999999999999999999       9999987799999999999999999987788999999999


Q ss_pred             CCCCCCCCCcceEEEEEEEEEcC-CCCccccceeecCCcccccCCCCCCcceEEEEEcCCccEEEEccCCCCCchhhhcc
Q 036603          512 PSTPGQPVKEPMFIPVAIGLLNS-SGKDMPLSSVYHNGKLQSLGSNNQPVYTTVLRVTKKEEEFVFSDISERPIPSILRG  590 (926)
Q Consensus       512 ~~~~~~~~~~~~~iPv~i~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ln~~~~~f~~~~~~~~p~~sllr~  590 (926)
                      +.+++++++.+|+|||.+++.+. +|..++.                    ..++.+++++++|+|.+++++|++|++|+
T Consensus       481 ~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~--------------------~~~l~l~~~~q~f~~~~~~~~p~~sl~r~  540 (889)
T 3ebh_A          481 KPDENQKEKKPLFIPISVGLINPENGKEMIS--------------------QTTLELTKESDTFVFNNIAVKPIPSLFRG  540 (889)
T ss_dssp             CCCSSCSSCCCCCEEEEEEEECTTTCCBCSC--------------------CEEEEECSSEEEEEESCCCSCCEEEESTT
T ss_pred             CCCCCCCCCceEEEEEEEEEEeCCCCccccc--------------------eeEEEecCCcEEEEEcCCCCCCeEEEcCC
Confidence            98888888889999999999987 7775431                    14789999999999999999999999999


Q ss_pred             CCCCeeecCCCCHHHHHhhHhcCCChhhHHHHHHHHHHHHHHHHHHhhccCC--------CCCCChhHHHHHHHHhcCCC
Q 036603          591 YSAPIRLESDLSDSDLFFLLANDSDEFNRWEAGQVLARKLMLSLVADFQQNK--------PLVLNPKFVHGFRSMLGDSS  662 (926)
Q Consensus       591 fsapv~~~~~~~~~~l~~ll~~d~D~f~r~~Ag~~l~~~~~l~l~~~~~~e~--------~~~v~~~~~~~l~~~~~~~~  662 (926)
                      ||+||++++++++++|++|++||+|+||||+|+|.|+.+.+++++...+.+.        +..+++.++++++.+|.+..
T Consensus       541 fsa~v~l~~~~~~~~l~~l~~~d~d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  620 (889)
T 3ebh_A          541 FSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPH  620 (889)
T ss_dssp             CCSSSEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTCTT
T ss_pred             CCceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999988765443        55678899999999999999


Q ss_pred             CCHHHHHHHhCCCCHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--------CCCCCHhHHHHH
Q 036603          663 LDKEFIAKAITLPGEGEIMDMMEVADPDAVHAVRTFIRKQLASELKAEFLTTVENNRSTG--------EYVFNHHNMARR  734 (926)
Q Consensus       663 ~~~~~~a~~l~lp~~~~l~~~~~~~dp~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~r  734 (926)
                      +|++|+|++|+||++++|+++++++||++||.||++++++||.+|+++|.++|+++...+        +|+++++++|+|
T Consensus       621 ~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  700 (889)
T 3ebh_A          621 ADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHVDFDQMNMR  700 (889)
T ss_dssp             SCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999875333        699999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHHHHHHHHhCCChhHHHHHHHHHHcCCcchHHHHHHHHHHhcCCchHHHHHHHHhhcccCC
Q 036603          735 ALKNIALAYLASLEDADIVELALREYKTATNMTEQFAALAAIVQKPGKIRDEVLDDFYGKWQHDYLVVNKWFALQAMSDI  814 (926)
Q Consensus       735 ~l~n~~l~~l~~~~~~~~~~~~~~~~~~a~nmtd~~~al~~l~~~~~~~~~~~l~~f~~~~~~~~l~~~kw~~~~a~~~~  814 (926)
                      +|||+||+||+..++++..++|.+||++| ||||++|||++|+++  ++|+++|++||++|++|+|||||||++||+++.
T Consensus       701 ~l~n~~l~~l~~~~~~~~~~~~~~~~~~a-nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~dkwf~~qa~~~~  777 (889)
T 3ebh_A          701 TLRNTLLSLLSKAQYPNILNEIIEHSKSP-YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLLQEWLKTVSRSDR  777 (889)
T ss_dssp             HHHHHHHHHHHHTTCTTHHHHHHHHTTCS-CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCChhHHHHHHHHHhhc-ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchhhHhHHHhhCCCC
Confidence            99999999999998889999999999999 999999999999996  889999999999999999999999999999999


Q ss_pred             CChHHHHHHHhcCCCCCCCCCcchhhhhhhccCCCcccccCCCchhHHHHHHHHHhhhcChhHHhhhhhHhhhhhccCHH
Q 036603          815 PGNVECVQRLLDHPAFDLRNPNKVYSLIGGFCGSPVNLHAKDGSGYKFLGEMVVQLDKINPQVASRMVSAFSRWRRFDET  894 (926)
Q Consensus       815 ~~~~~~v~~l~~~~~f~~~~pn~~r~l~~~f~~n~~~fh~~~g~gy~~~~~~~~~~~~~np~~a~r~~~~~~~~~~~~~~  894 (926)
                      ++++++|++||+||+|+++||||||||||+||+||++||++||+||+||||+|++||++||||||||+++|.+|+|||++
T Consensus       778 ~~~~~~v~~l~~h~~f~~~npn~~r~l~g~f~~n~~~fh~~~g~gy~~~~~~~~~ld~~np~~a~r~~~~~~~~~~~~~~  857 (889)
T 3ebh_A          778 KDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLIAEVITKTDKFNPMVATQLCEPFKLWNKLDTK  857 (889)
T ss_dssp             TTHHHHHHHHHHHTTTTCCCHHHHHHHHTGGGGCHHHHTCTTSHHHHHHHHHHHHHHTTCHHHHHHTTGGGGGGGGBCHH
T ss_pred             cCHHHHHHHHhcCCCCCCCCCcHHHHHHHHHhcChhhccCCCCcHHHHHHHHHHHHcccChHHHHHHHHHHHHHHhcCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCccHHHHHHhhhc
Q 036603          895 RQNLAKAQLEMIMSANGLSENVFEIASKSLA  925 (926)
Q Consensus       895 ~~~~~~~~l~~~~~~~~ls~~~~e~~~~~l~  925 (926)
                      ||++||++|+||++.++||+||+|||+|+|+
T Consensus       858 r~~~~~~~l~~~~~~~~ls~~~~e~~~~~l~  888 (889)
T 3ebh_A          858 RQELMLNEMNTMLQEPQISNNLKEYLLRLTN  888 (889)
T ss_dssp             HHHHHHHHHHHHHTCTTCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCCCCCcCHHHHHHHHhc
Confidence            9999999999999999999999999999996
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Back     alignment and structure
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 926
d3b7sa3252 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat 2e-36
d3b7sa2208 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term 4e-25
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 2e-36
 Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 35/259 (13%)

Query: 259 SGRKVS--LRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAV-PDFNMG 315
             R++     +W+  + + K+A+     ++ +K  ED+ G  Y    ++++ + P F  G
Sbjct: 2   ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYG 60

Query: 316 AMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEG 375
            MEN  L      L+      ++         VI H+  H+WTGN VT + W    L EG
Sbjct: 61  GMENPCLTFVTPTLLAGDKSLSN---------VIAHQISHSWTGNLVTNKTWDHFWLNEG 111

Query: 376 LTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPH-------------- 421
            TV+ ++     +     +    +      Q         HP                  
Sbjct: 112 HTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYS 171

Query: 422 --SYIKGAEVVRMYKTLLGSQ-GFRKGMDLYFKRHDGQAVTCEDFFAAM-----RDANDA 473
              Y KG  ++   + LLG    F   +  Y ++   +++T +D+   +        +  
Sbjct: 172 SVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVL 231

Query: 474 EFANFLLWYSQAGTPRLKV 492
              ++  W    G P +K 
Sbjct: 232 NQVDWNAWLYSPGLPPIKP 250
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query926
d3b7sa3252 Leukotriene A4 hydrolase catalytic domain {Human ( 100.0
d3b7sa2208 Leukotriene A4 hydrolase N-terminal domain {Human 99.96
d1u4ga_298 Elastase {Pseudomonas aeruginosa [TaxId: 287]} 88.16
d1bqba_301 Aureolysin {Staphylococcus aureus [TaxId: 1280]} 85.54
d1r55a_203 ADAM33 {Human (Homo sapiens) [TaxId: 9606]} 80.56
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=392.78  Aligned_cols=221  Identities=22%  Similarity=0.404  Sum_probs=184.5

Q ss_pred             EEEEEEccCCChhhHHHHHHHHHHHHHHHHHHhCCCCCCCcccEEEe-cCCCCccccccccccccccccccCCCCCChHH
Q 036603          263 VSLRIWTPAQDLPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAV-PDFNMGAMENKSLNIFNSKLVLASPETASDAD  341 (926)
Q Consensus       263 v~l~vy~~~~~~~~~~~al~~~~~~l~~~e~~fG~~YP~~k~~iV~v-p~f~~gaMEn~Gli~~~~~~ll~~~~~~t~~~  341 (926)
                      +.|+||++|+..++++++++.++++|++||++|| |||++|+++|++ |+|..|||||+|++++++..++.+..      
T Consensus         8 ~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~------   80 (252)
T d3b7sa3           8 PRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS------   80 (252)
T ss_dssp             TTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST------
T ss_pred             CceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccceeeeecchhccccch------
Confidence            5789999999999999999999999999999999 999999999999 68889999999999999887654432      


Q ss_pred             HHHHHHHHHHHHHHHhhCCcccccCCCchhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhccCCC----CCCCCCCC
Q 036603          342 YAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSKLRNYQFPQ----DAGPMAHP  417 (926)
Q Consensus       342 ~~~i~~viaHElaHqWfGn~Vt~~~w~dlWL~EGfAty~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~----D~~~~~~p  417 (926)
                         +..+|+||+|||||||+||++||+++||+||||+|++..+.++..+....+......++......    +..|.+.+
T Consensus        81 ---~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (252)
T d3b7sa3          81 ---LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKL  157 (252)
T ss_dssp             ---TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSS
T ss_pred             ---HHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCccee
Confidence               34689999999999999999999999999999999999999888776543332221111111100    11111111


Q ss_pred             ------------CCccccchHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCcChHHH----H-
Q 036603          418 ------------VRPHSYIKGAEVVRMYKTLLG-SQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANF----L-  479 (926)
Q Consensus       418 ------------i~~~~Y~KGa~vl~ML~~~lG-~e~F~~~lr~Yl~~~~~~~~t~~Df~~~le~~sg~dL~~f----~-  479 (926)
                                  +..++|.||++||+||+..|| ++.|+++||.|+++|++++++++||++++++++|++++.+    + 
T Consensus       158 ~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~f~  237 (252)
T d3b7sa3         158 VVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWN  237 (252)
T ss_dssp             SCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSCHH
T ss_pred             eccccccchhhcccceeecchhHHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhccccchhhHhHHH
Confidence                        235689999999999999999 6789999999999999999999999999999999999887    6 


Q ss_pred             HHHhcCCcceEEEE
Q 036603          480 LWYSQAGTPRLKVT  493 (926)
Q Consensus       480 ~W~~q~G~P~l~V~  493 (926)
                      +|++++|+|+|+|+
T Consensus       238 ~W~~~~G~P~l~v~  251 (252)
T d3b7sa3         238 AWLYSPGLPPIKPN  251 (252)
T ss_dssp             HHHHCCSSCSSCCC
T ss_pred             HHhcCCCCCeeecc
Confidence            99999999999985
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure