Citrus Sinensis ID: 036769
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 306 | ||||||
| 224084425 | 823 | predicted protein [Populus trichocarpa] | 0.911 | 0.339 | 0.541 | 4e-65 | |
| 296087389 | 839 | unnamed protein product [Vitis vinifera] | 0.885 | 0.323 | 0.487 | 9e-63 | |
| 147834523 | 839 | hypothetical protein VITISV_000519 [Viti | 0.885 | 0.323 | 0.476 | 4e-60 | |
| 359480653 | 826 | PREDICTED: probable receptor-like protei | 0.862 | 0.319 | 0.476 | 3e-59 | |
| 225438853 | 842 | PREDICTED: probable receptor-like protei | 0.885 | 0.321 | 0.491 | 5e-59 | |
| 147801769 | 842 | hypothetical protein VITISV_030033 [Viti | 0.885 | 0.321 | 0.491 | 6e-59 | |
| 296087383 | 1825 | unnamed protein product [Vitis vinifera] | 0.921 | 0.154 | 0.462 | 2e-56 | |
| 359480651 | 830 | PREDICTED: probable receptor-like protei | 0.921 | 0.339 | 0.462 | 2e-56 | |
| 225438861 | 923 | PREDICTED: probable receptor-like protei | 0.918 | 0.304 | 0.453 | 6e-56 | |
| 225438855 | 830 | PREDICTED: probable receptor-like protei | 0.908 | 0.334 | 0.483 | 8e-56 |
| >gi|224084425|ref|XP_002307290.1| predicted protein [Populus trichocarpa] gi|222856739|gb|EEE94286.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 201/288 (69%), Gaps = 9/288 (3%)
Query: 22 LLSVGLNCAAYSLPEKYFINCGSDTEVTSGNRIFRGD---RNSDSISFSEPSYPVKNSSQ 78
+LS+ L AY++P+KYFI+CGSDT T+ R F GD NS S +F+ S PVK+S++
Sbjct: 1 MLSLHLPSLAYTVPDKYFISCGSDTNSTASGRTFIGDLTSGNSGSFTFTRQSSPVKDSNK 60
Query: 79 LPDTLALYQTARVFDQSSHYEFDISSNGTHLVRLHFFAFSSAKNLYNAVFNVSTSHPFLL 138
T LYQTAR+F + S YEF ISS GT+LVRLHFF+FS + NL A+F+V S L
Sbjct: 61 STATPPLYQTARIFRERSSYEFVISSAGTYLVRLHFFSFSYSANLSTALFDVLASE-ISL 119
Query: 139 LHNFNVQNSSQSPVIKDFFLSITQGKFCVYFRPQESSFAFVSAIEVFVVDPLPLSSIPDN 198
+ NF+V + S SP+IK+FF++IT GKF +YF PQ SSFAFV+AIE+F+ P + IP +
Sbjct: 120 VDNFSVPHRSNSPLIKEFFINITVGKFPIYFMPQGSSFAFVNAIELFLA---PENFIPSS 176
Query: 199 GPHVSPIGTKTNSYPGIHPKALQTIYRINVGGPMISQENDTLGRNWIPDDRYLYNPDTAK 258
P VSP G++ + I L TI+RINVGGP +S ENDTL R W+PDD +LY+PDTAK
Sbjct: 177 APLVSPAGSEGKN-EDILSMVLLTIHRINVGGPTLSPENDTLWRYWVPDDSFLYSPDTAK 235
Query: 259 IVGPIANL-NYLGIASEYTAPDSVYQTAKHMNKNNSRLSNNFNITWCF 305
+ +++ N G S+Y APD VYQTAK MN NNSR SNNFNITW F
Sbjct: 236 NISSLSSKPNSQGGVSKYIAPDLVYQTAKEMNINNSRSSNNFNITWSF 283
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087389|emb|CBI33763.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147834523|emb|CAN60912.1| hypothetical protein VITISV_000519 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359480653|ref|XP_003632509.1| PREDICTED: probable receptor-like protein kinase At2g23200-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225438853|ref|XP_002278695.1| PREDICTED: probable receptor-like protein kinase At5g24010 [Vitis vinifera] gi|296087388|emb|CBI33762.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147801769|emb|CAN74534.1| hypothetical protein VITISV_030033 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296087383|emb|CBI33757.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359480651|ref|XP_002278814.2| PREDICTED: probable receptor-like protein kinase At5g24010-like [Vitis vinifera] gi|147778584|emb|CAN60310.1| hypothetical protein VITISV_015005 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225438861|ref|XP_002278746.1| PREDICTED: probable receptor-like protein kinase At5g24010-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225438855|ref|XP_002278713.1| PREDICTED: probable receptor-like protein kinase At5g24010 [Vitis vinifera] gi|296087387|emb|CBI33761.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 306 | ||||||
| TAIR|locus:2050080 | 871 | AT2G21480 [Arabidopsis thalian | 0.908 | 0.319 | 0.355 | 1.9e-37 | |
| TAIR|locus:2136338 | 878 | AT4G39110 [Arabidopsis thalian | 0.866 | 0.301 | 0.359 | 8.8e-37 | |
| TAIR|locus:2151349 | 855 | THE1 "THESEUS1" [Arabidopsis t | 0.928 | 0.332 | 0.331 | 6e-36 | |
| TAIR|locus:2174249 | 829 | AT5G59700 [Arabidopsis thalian | 0.895 | 0.330 | 0.345 | 4.8e-34 | |
| TAIR|locus:2178707 | 824 | AT5G24010 [Arabidopsis thalian | 0.905 | 0.336 | 0.345 | 6.1e-34 | |
| TAIR|locus:2075346 | 830 | HERK1 "hercules receptor kinas | 0.875 | 0.322 | 0.346 | 1.6e-32 | |
| TAIR|locus:2163158 | 842 | AT5G61350 [Arabidopsis thalian | 0.859 | 0.312 | 0.346 | 4e-31 | |
| TAIR|locus:2058636 | 834 | AT2G23200 [Arabidopsis thalian | 0.882 | 0.323 | 0.333 | 1e-26 | |
| TAIR|locus:2039717 | 815 | AT2G39360 [Arabidopsis thalian | 0.869 | 0.326 | 0.325 | 8.9e-26 | |
| TAIR|locus:2081895 | 895 | FER "FERONIA" [Arabidopsis tha | 0.911 | 0.311 | 0.325 | 7.1e-24 |
| TAIR|locus:2050080 AT2G21480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 108/304 (35%), Positives = 164/304 (53%)
Query: 16 LIFLLHLLSV-----GLNCAAYSLPEKYFINCGSDTEV-TSGNRIFRGDRNSDSISFSEP 69
L+FL L S G A + + I+CGS + T R+F+ D S+++ + E
Sbjct: 30 LLFLTGLASAVGAVGGSPTAGFKPADDILIDCGSKSSTKTPEGRVFKSD--SETVQYIEA 87
Query: 70 SYPVKNSSQLPDTLA--LYQTARVFDQSSHYEFDISSNGTHLVRLHFFAFSSAK-NLYNA 126
++ S+ D L +Y TA++F + + Y+F ++ G H VRLHFFAF + K +L A
Sbjct: 88 KDDIQVSAPPSDKLPSPIYLTAKIFREEAIYKFHLTRPGWHWVRLHFFAFPNDKFDLQQA 147
Query: 127 VFNVSTSHPFLLLHNF---NVQNSSQSPVIKDFFLSITQGKFCVYFRPQESSFAFVSAIE 183
F+V T ++LLHNF N N SQ+ V K++ L++T +F + F+P + S AF++ IE
Sbjct: 148 TFSVLTEK-YVLLHNFKLSNDNNDSQATVQKEYLLNMTDAQFALRFKPMKGSAAFINGIE 206
Query: 184 VFVVDPLPLSSIPDNGPHVSPIGTKTNSYPGIHPKALQTIYRINVGGPMISQENDTLGRN 243
+ V P L I D G + P+ N + G+ A Q++YR+NVGGP+I+ +NDTLGR
Sbjct: 207 L-VSAPDEL--ISDAGTSLFPV----NGFSGLSDYAYQSVYRVNVGGPLITPQNDTLGRT 259
Query: 244 WIPDDRYLYNPDTAKIV--GPIANLNYLGIASEYTAPDSVYQTAKHMXXXXXXXXXXXXI 301
W PD YL + + AK V P A + G+ + AP +VY T M +
Sbjct: 260 WTPDKEYLKDENLAKDVKTNPTAIIYPPGV-TPLIAPQTVYATGAEMADSQTIDPNFN-V 317
Query: 302 TWCF 305
TW F
Sbjct: 318 TWNF 321
|
|
| TAIR|locus:2136338 AT4G39110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2151349 THE1 "THESEUS1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174249 AT5G59700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178707 AT5G24010 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075346 HERK1 "hercules receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2163158 AT5G61350 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2058636 AT2G23200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039717 AT2G39360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2081895 FER "FERONIA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| grail3.0027010001 | SubName- Full=Putative uncharacterized protein; (823 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 306 | |||
| pfam12819 | 335 | pfam12819, Malectin_like, Carbohydrate-binding pro | 2e-23 | |
| pfam11721 | 164 | pfam11721, Malectin, Di-glucose binding within end | 3e-09 |
| >gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 2e-23
Identities = 56/283 (19%), Positives = 96/283 (33%), Gaps = 56/283 (19%)
Query: 40 INCGSDTEVT----SGNRIFRGDRNSDSISFSEPSYPVKNSSQLPDTLALYQTARVFDQS 95
I+CG + + S + D + S + + Y+T R F
Sbjct: 1 IDCGLPSNESYTDPSTGITWVSD---AGFIDTGKSGNISKENSSSFLSKPYKTLRSFPDG 57
Query: 96 SH--YEFDISSNG--THLVRLHFFAFSSAKNLYNAVFNVSTSHPFLLLHNFNV------Q 145
Y ++ +L+R F + Y+ + +VS+ F L N+
Sbjct: 58 KRNCYTLPVTPGKGTKYLIRATFLYGN-----YDGLNSVSSPPSFDLYLGVNLWTTVNLS 112
Query: 146 NSSQSPVIKDFFLSITQGK---FCVYFRPQESSFAFVSAIEVFVVDPLPLSSIPDNGPHV 202
N S V+K++ + +T+ C + F+SA+E+ PLP S P +G
Sbjct: 113 NDSGDSVVKEYIIHVTKSDTLSVC--LVNTGTGTPFISALELR---PLPDSLYPSSGGSQ 167
Query: 203 SPIGTKTNSYPGIHPKALQTIYRINVG--GPMISQENDTLGRNWIPDDRYLYNPDTAKIV 260
AL+ + R+N G I +D R W P + +
Sbjct: 168 ----------------ALKLVARLNFGGSEGTIRYPDDVYDRIWEPFF----SSPGWSQI 207
Query: 261 GPIANLNYLGIASEYTAPDSVYQTAKHMNKNNSRLSNNFNITW 303
+++ + Y P +V QTA S N TW
Sbjct: 208 STSLSVDISSNNAPYIPPSAVLQTAVTPTNA----SAPLNFTW 246
|
Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. Length = 335 |
| >gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 306 | |||
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 100.0 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 100.0 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 99.85 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.84 | |
| PF12819 | 347 | Malectin_like: Carbohydrate-binding protein of the | 99.68 | |
| KOG3593 | 355 | consensus Predicted receptor-like serine/threonine | 96.73 | |
| PF11721 | 174 | Malectin: Di-glucose binding within endoplasmic re | 94.46 |
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=358.60 Aligned_cols=235 Identities=32% Similarity=0.549 Sum_probs=179.0
Q ss_pred EeeCCCCccC-----CCCceeeCCCCCCccccc-CCccceecC-C-CCCCChhhccceeecC--CCceEEEecCC--CCe
Q 036769 40 INCGSDTEVT-----SGNRIFRGDRNSDSISFS-EPSYPVKNS-S-QLPDTLALYQTARVFD--QSSHYEFDISS--NGT 107 (306)
Q Consensus 40 InCG~~~~~~-----~~gr~W~~D~~~~~~y~~-~~~~~v~~~-~-~~~~~~~~Y~TaR~F~--~~~~Y~fpv~~--~G~ 107 (306)
||||++.+.. ..||+|++|.+ |+. |.+..+... + .....+++|+|||+|+ ...||+|++.+ +++
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~----~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~ 76 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDD----FIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGK 76 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCC----cccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCce
Confidence 7999986632 34999999995 776 654444211 1 1124578999999999 45899999973 349
Q ss_pred EEEEEEEeccccCCC-----CcCeeEEEEECCceEEEEeeeecCCCCCcEEEEEEEeec-CCeEEEEEEecC-CCceeEE
Q 036769 108 HLVRLHFFAFSSAKN-----LYNAVFNVSTSHPFLLLHNFNVQNSSQSPVIKDFFLSIT-QGKFCVYFRPQE-SSFAFVS 180 (306)
Q Consensus 108 YlVRLhF~~~~~~~~-----~~~~~FdV~i~~~~~ll~~f~v~~~~~~~~~kEf~v~v~-~~~L~I~f~P~~-~~~aFIN 180 (306)
|||||||+|++|++. .+.+.||++++. ..|..+++......+++|||+++++ ++.|.|||+|.. +.+||||
T Consensus 77 yliRl~F~~gnyd~~~fs~~~~~~~FdL~~~~--n~~~tV~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIs 154 (347)
T PF12819_consen 77 YLIRLHFYYGNYDGLNFSVSSSPPTFDLLLGF--NFWSTVNLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFIS 154 (347)
T ss_pred EEEEEEeccccccccccccccCCcceEEEECC--ceeEEEEecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCcee
Confidence 999999999999962 236779999998 6677776653223579999999998 799999999998 4569999
Q ss_pred eeeeeecCCCCCCCCCCCCCCcccCCccCCCCCCCcccceeeEEEEeecCCc--cCCCCCCCCCCcCCCCCCcccCCCCe
Q 036769 181 AIEVFVVDPLPLSSIPDNGPHVSPIGTKTNSYPGIHPKALQTIYRINVGGPM--ISQENDTLGRNWIPDDRYLYNPDTAK 258 (306)
Q Consensus 181 aIEI~~~~~lp~~ly~~~~~~~~~~~~~~~~~~~~~~~aL~t~~RlNvGg~~--I~~~~D~~~R~W~~D~~yl~~~~~~~ 258 (306)
||||++ ||+++|++. ...++.|||++||+||||+. |++++|++||+|.+ |. ......
T Consensus 155 aiEl~~---lp~~ly~~~--------------~~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~---~~-~~~~~~ 213 (347)
T PF12819_consen 155 AIELRP---LPDSLYPDT--------------DANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQP---YS-SSPGWS 213 (347)
T ss_pred EEEEEE---CCccceecc--------------ccCCCceeEEEEeecCCCcccccCCCCCcceeeccc---cc-cCcccc
Confidence 999999 999999531 12357899999999999998 99999999999994 31 111122
Q ss_pred eeccceeeeecCCCCCCCChHHHHHHHhhcccCCCCCCCceeEeEEe
Q 036769 259 IVGPIANLNYLGIASEYTAPDSVYQTAKHMNKNNSRLSNNFNITWCF 305 (306)
Q Consensus 259 ~~~~~~~i~y~~~~~~~~aP~~VY~TA~~m~~~~~~~~~~~nltW~f 305 (306)
..+...+|++....++|.||..||+||++|++. + . ++|+||.|
T Consensus 214 ~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~-s-~--~~nltw~~ 256 (347)
T PF12819_consen 214 NISTTSNININSSNNPYDAPSAVYQTARTPSNS-S-D--PLNLTWSF 256 (347)
T ss_pred ccccceeeecccCCccCcChHHHHHhhhccccc-c-c--ceEEEecc
Confidence 222334465333457899999999999999977 4 2 49999987
|
This entry represents a malectin-like domain found in a number of plant receptor kinases. |
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] | Back alignment and domain information |
|---|
| >KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 306 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 2e-22 | |
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 3e-08 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 | Back alignment and structure |
|---|
Score = 91.2 bits (226), Expect = 2e-22
Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 20/165 (12%)
Query: 38 YFINCGSDTEVTSGNRIFRGDRNSDSISFSEPSYPVKNSSQLPDTL--ALYQTARVFDQS 95
+ +N G ++ V +R D + + Y +K + LYQT R + S
Sbjct: 8 WAVNAGGESHVDVHGIHYRKDPLEGRVGRAS-DYGMKLPILRSNPEDQVLYQTERYNEDS 66
Query: 96 SHYEFDISSNGTHLVRLHFFAFSSAKNLYNAVFNVSTSHPFLLLHNFNVQNSSQSP---- 151
Y+ I G +++ L FA VF+V + ++ + ++ +
Sbjct: 67 FGYDIPIKEEGEYVLVLK-FAEVYFAQSQQKVFDVRVNG-HTVVKDLDIFDRVGHSTAHD 124
Query: 152 -----VIKDFFLSIT------QGKFCVYFRPQESSFAFVSAIEVF 185
IK LS+ GK V F V A+ +
Sbjct: 125 EIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIM 169
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 306 | |||
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 100.0 | |
| 2jwp_A | 174 | Malectin, MGC80075; sugar binding, sugar binding p | 98.66 | |
| 2wz8_A | 156 | Cellulosome protein dockerin type I; sugar binding | 89.7 | |
| 2w47_A | 144 | Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. | 89.54 | |
| 2vzp_A | 127 | Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS | 86.93 | |
| 2w3j_A | 145 | Carbohydrate binding module; sugar-binding protein | 86.32 | |
| 2w87_A | 139 | Esterase D, XYL-CBM35; plant cell WALL degradation | 80.65 |
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=240.23 Aligned_cols=145 Identities=20% Similarity=0.223 Sum_probs=117.7
Q ss_pred ceEEEeeCCCCccCCCCceeeCCCCCCccccc-CCcc----ceecCCCCCCChhhccceeecCCCceEEEecCCCCeEEE
Q 036769 36 EKYFINCGSDTEVTSGNRIFRGDRNSDSISFS-EPSY----PVKNSSQLPDTLALYQTARVFDQSSHYEFDISSNGTHLV 110 (306)
Q Consensus 36 ~~~~InCG~~~~~~~~gr~W~~D~~~~~~y~~-~~~~----~v~~~~~~~~~~~~Y~TaR~F~~~~~Y~fpv~~~G~YlV 110 (306)
..|||||||+..++.+||+|.+|.. |.. +... ........++++.+|+|||+|+.+++|.||+.++|+|+|
T Consensus 6 ~~~~INcGg~~~~d~~gr~w~~D~~----~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~V 81 (174)
T 2jwp_A 6 VIWAVNAGGESHVDVHGIHYRKDPL----EGRVGRASDYGMKLPILRSNPEDQVLYQTERYNEDSFGYDIPIKEEGEYVL 81 (174)
T ss_dssp EEEEEEETSSSEEETTTEEECSSCS----STTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCSCEEEEEECCSCEEEEE
T ss_pred EEEEEECCCCCccCCCCCEEcCCcC----cccCCcccccccceEecccCCCCchhhhhhccCCCCeEEEEEeCCCeEEEE
Confidence 5799999999876778999999974 432 2111 111111122467899999999999999999987899999
Q ss_pred EEEEeccccCCCCcCeeEEEEECCceEEEEeeeec--CCCCCcEEEEEEEee-------------cCCeEEEEEEecCCC
Q 036769 111 RLHFFAFSSAKNLYNAVFNVSTSHPFLLLHNFNVQ--NSSQSPVIKDFFLSI-------------TQGKFCVYFRPQESS 175 (306)
Q Consensus 111 RLhF~~~~~~~~~~~~~FdV~i~~~~~ll~~f~v~--~~~~~~~~kEf~v~v-------------~~~~L~I~f~P~~~~ 175 (306)
||||||+.+. +.++|+|||+||+ .+++++||+. ++...+++|||.+.+ .+++|+|+|.|....
T Consensus 82 rLhF~ei~~~-~~~~rvFdV~ing-~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~ 159 (174)
T 2jwp_A 82 VLKFAEVYFA-QSQQKVFDVRVNG-HTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYD 159 (174)
T ss_dssp EEEEECCSCC-CSSSSCEEEEETT-EEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSC
T ss_pred EEEEeccccC-CCCCeEeEEEECC-EEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCC
Confidence 9999999887 5899999999999 9999999997 334678999998874 567899999997667
Q ss_pred ceeEEeeeeee
Q 036769 176 FAFVSAIEVFV 186 (306)
Q Consensus 176 ~aFINaIEI~~ 186 (306)
.||||||||++
T Consensus 160 ~a~inaIEI~~ 170 (174)
T 2jwp_A 160 NPKVCALFIMK 170 (174)
T ss_dssp SSSEEEEEEES
T ss_pred CcEEEEEEEEe
Confidence 89999999998
|
| >2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* | Back alignment and structure |
|---|
| >2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A | Back alignment and structure |
|---|
| >2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* | Back alignment and structure |
|---|
| >2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} | Back alignment and structure |
|---|
| >2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 306 | |||
| d2o14a1 | 146 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.95 |
| >d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Galactose-binding domain-like superfamily: Galactose-binding domain-like family: YxiM N-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=97.95 E-value=5.3e-05 Score=61.58 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=62.5
Q ss_pred CceEEEecCCCCeEEEEEEEeccccCCCCcCeeEEEEECCceEEEEeeeecCCCCCcEEEEEEEeecCCeEEEEEEecC-
Q 036769 95 SSHYEFDISSNGTHLVRLHFFAFSSAKNLYNAVFNVSTSHPFLLLHNFNVQNSSQSPVIKDFFLSITQGKFCVYFRPQE- 173 (306)
Q Consensus 95 ~~~Y~fpv~~~G~YlVRLhF~~~~~~~~~~~~~FdV~i~~~~~ll~~f~v~~~~~~~~~kEf~v~v~~~~L~I~f~P~~- 173 (306)
...|.++|. +|.|.|+++|-+. ...+|.+.+ ...+.++. .....+.|.|++++++|+|.|....
T Consensus 64 ~~~f~v~vP-nG~Y~Vtv~~Gd~--------~~~~~~~eg-~~~~~~~~-----g~~~~~~~~V~VtDG~L~l~ft~~~~ 128 (146)
T d2o14a1 64 NNTFNVDLP-NGLYEVKVTLGNT--------ARASVAAEG-VFQVINMT-----GDGAEDTFQIPVTDGQLNLLVTEGKA 128 (146)
T ss_dssp SCCEEEECC-SEEEEEEEEESSC--------SEEEEEETT-EEEEEEEE-----STTCEEEEEEEECSSEEEEEEEESST
T ss_pred CceEEEECC-CCeEEEEEEEecC--------CCccEEEee-EEeccccC-----CccEEEEEEEEEECCeEEEEEecCCC
Confidence 358999996 8999999999862 234788888 77777763 3446788999999999999998655
Q ss_pred CCceeEEeeeeee
Q 036769 174 SSFAFVSAIEVFV 186 (306)
Q Consensus 174 ~~~aFINaIEI~~ 186 (306)
+..|-||+|||.+
T Consensus 129 G~~~~in~l~I~~ 141 (146)
T d2o14a1 129 GTAFTLSALKIKK 141 (146)
T ss_dssp TSCCEEEEEEEEE
T ss_pred CCccEEEEEEEEe
Confidence 5679999999999
|