Citrus Sinensis ID: 036830
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 760 | 2.2.26 [Sep-21-2011] | |||||||
| O65351 | 757 | Subtilisin-like protease | no | no | 0.948 | 0.952 | 0.389 | 1e-129 | |
| Q39547 | 731 | Cucumisin OS=Cucumis melo | N/A | no | 0.884 | 0.919 | 0.396 | 1e-129 | |
| O64495 | 775 | Subtilisin-like protease | no | no | 0.931 | 0.913 | 0.378 | 1e-125 | |
| Q9LLL8 | 749 | Xylem serine proteinase 1 | no | no | 0.896 | 0.909 | 0.374 | 1e-116 | |
| P29141 | 806 | Minor extracellular prote | yes | no | 0.672 | 0.633 | 0.244 | 1e-24 | |
| P0DD35 | 1169 | C5a peptidase OS=Streptoc | no | no | 0.463 | 0.301 | 0.249 | 4e-10 | |
| P0DD34 | 1169 | C5a peptidase OS=Streptoc | N/A | no | 0.463 | 0.301 | 0.249 | 4e-10 | |
| P15926 | 1167 | C5a peptidase OS=Streptoc | no | no | 0.463 | 0.301 | 0.242 | 2e-09 | |
| P15293 | 1902 | PII-type proteinase OS=La | N/A | no | 0.567 | 0.226 | 0.236 | 3e-09 | |
| Q5X9R0 | 1184 | C5a peptidase OS=Streptoc | N/A | no | 0.463 | 0.297 | 0.247 | 3e-09 |
| >sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 303/778 (38%), Positives = 428/778 (55%), Gaps = 57/778 (7%)
Query: 1 MASSLMLLQLLPFLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLN 60
M+SS L F L L F +SS+ YIV+M S Q ++
Sbjct: 1 MSSSF--LSSTAFFLLLCLGFCHVSSSSSDQGTYIVHMAKS-------QMPSSFDLHSNW 51
Query: 61 HMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLH 120
+ L SI S E L++ Y++A GFS LT EA +L V+SV P+ +LH
Sbjct: 52 YDSSLRSISDSAE-----LLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELH 106
Query: 121 TTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWK 180
TTR+ FL A Y SD+V+GV+DTG+WPES S++D+G G IPS WK
Sbjct: 107 TTRTPLFLGLDEHTADLFPEAGSY----SDVVVGVLDTGVWPESKSYSDEGFGPIPSSWK 162
Query: 181 GVCMESPDFKKSHCNRKLIGARHCSRASTNK----DNSGSSRDPL---GHGTHTASTAAG 233
G C +F S CNRKLIGAR +R + D S SR P GHGTHT+STAAG
Sbjct: 163 GGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDESKESRSPRDDDGHGTHTSSTAAG 222
Query: 234 NYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISI 293
+ V A G A GTARG +P +R+A YK C GGC + IL AID AI D V+++S+S+
Sbjct: 223 SVVEGASLLGYASGTARGMAPRARVAVYKVCWLGGCFSSDILAAIDKAIADNVNVLSMSL 282
Query: 294 GLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRD 353
G +DY D +AIGA A +RG++V CSAGN GP +++N APW+ TV A T+DRD
Sbjct: 283 G--GGMSDYYRDGVAIGAFAAMERGILVSCSAGNAGPSSSSLSNVAPWITTVGAGTLDRD 340
Query: 354 FQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDT 413
F + +LGNGK G ++ K P Y A N++ + + C+ TL P
Sbjct: 341 FPALAILGNGKNFTGVSLFKGEALPDKLLPFIY----AGNASNATNGNLCMTGTLIPEKV 396
Query: 414 RGRKIAVAENVEAQ-------------GLIFIN---DDEKIWPTERGILPYAEVGKVAGF 457
+G+ + + A+ G+I N + E++ + +LP VG+ AG
Sbjct: 397 KGKIVMCDRGINARVQKGDVVKAAGGVGMILANTAANGEEL-VADAHLLPATTVGEKAGD 455
Query: 458 RIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLA 517
I +Y+ ++ NPTA+I T+ +P+PVVA FSSRGP T NILKPD+ APGV +LA
Sbjct: 456 IIRHYVTTDPNPTASISILGTVVGVKPSPVVAAFSSRGPNSITPNILKPDLIAPGVNILA 515
Query: 518 AIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577
A P G+ + + + + SGTSM+CPHV+G AA +KSV +W+ + I+SALMTT
Sbjct: 516 AWTGAAG-PTGLASDSRRVEFNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTT 574
Query: 578 ATVYDNTGTPLTN-SSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSK 636
A G PL + ++G + P + GAG ++P A NPGL++ T +DYL FLC Y+
Sbjct: 575 AYKTYKDGKPLLDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTS 634
Query: 637 KNIRSMTNTTFNC-PKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYI 695
IRS++ + C P KS + ++++NYPS +++ + GA + RTVT+VG +
Sbjct: 635 PQIRSVSRRNYTCDPSKSYS--VADLNYPSFAVN-VDGVGAYK-YTRTVTSVGGAGTYSV 690
Query: 696 SMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASF-FGKEASSGYN-YGSITWSDDRHSV 751
+ + +G+ + V P L F E K S+ +F SG N +GSI WSD +H V
Sbjct: 691 KVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPSGSNSFGSIEWSDGKHVV 748
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Serine protease. Has a substrate preference for the hydrophobic residues Phe and Ala and the basic residue Asp in the P1 position, and for Asp, Leu or Ala in the P1' position. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: - |
| >sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 292/736 (39%), Positives = 418/736 (56%), Gaps = 64/736 (8%)
Query: 34 YIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAI 93
YIVYMG + ED + A L+H +L ++ S + S++H YK +F GF+
Sbjct: 34 YIVYMG---------RKLEDPDSAHLHHRAMLEQVVGSTFAPE-SVLHTYKRSFNGFAVK 83
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVI 153
LT+ EA ++ + VVSVF + + +LHTTRSWDFL + + + S+IV+
Sbjct: 84 LTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLGFPLTVPRRS-------QVESNIVV 136
Query: 154 GVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR--HCSRASTNK 211
GV+DTGIWPESPSF+D+G P +WKG C S +F+ CNRK+IGAR H R +
Sbjct: 137 GVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIGRPISPG 193
Query: 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSG 271
D +G RD GHGTHTASTAAG VS A +GL GTARGG P +RIA+YK C GCS
Sbjct: 194 DVNGP-RDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSD 252
Query: 272 AAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPY 331
IL A DDAI DGVDIIS+S+G +N Y D IAIG+ HA +RG++ SAGN GP
Sbjct: 253 TDILAAYDDAIADGVDIISLSVGGANPR-HYFVDAIAIGSFHAVERGILTSNSAGNGGPN 311
Query: 332 PFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIA 391
FT A+ +PWL +VAAST+DR F + V +GNG++ +G +I N ++ YPL G+ I
Sbjct: 312 FFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSI---NTFDNQYYPLVSGRDIP 368
Query: 392 VNSTLVSQASQCLYTTLYPMDTRGRKIAVAE----------NVEAQGLIFINDDEKIWPT 441
S + C ++ P +G KI V E +++ + + + + +
Sbjct: 369 NTGFDKSTSRFCTDKSVNPNLLKG-KIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDY-A 426
Query: 442 ERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTE 501
+ LP + + + YI S ++P ATI + TI + APVV FSSRGP T+
Sbjct: 427 DSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSRGPNRATK 485
Query: 502 NILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSV 561
+++KPD++ PGV +LAA P GGI + + + SGTSM+CPH+TG A ++K+
Sbjct: 486 DVIKPDISGPGVEILAAW-PSVAPVGGI---RRNTLFNIISGTSMSCPHITGIATYVKTY 541
Query: 562 RRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTT 621
W+ + IKSALMTTA +P+ N+ N G+G +NPLKA+ PGLV+
Sbjct: 542 NPTWSPAAIKSALMTTA-------SPM-NARFNPQAEFAYGSGHVNPLKAVRPGLVYDAN 593
Query: 622 IKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVK 681
DY++FLC GY+ + +R +T C ++ + + ++NYPS +S Q +
Sbjct: 594 ESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGR-VWDLNYPSFGLSVSPSQTFNQYFN 652
Query: 682 RTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGI-----IKLSFKASFFGKEASSG 736
RT+T+V +TY +M++AP GL + V P L+F G+ L+ + S G S+
Sbjct: 653 RTLTSVAPQASTYRAMISAPQGLTISVNPNVLSF-NGLGDRKSFTLTVRGSIKGFVVSA- 710
Query: 737 YNYGSITWSDDRHSVR 752
S+ WSD H VR
Sbjct: 711 ----SLVWSDGVHYVR 722
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Cucumis melo (taxid: 3656) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 5 |
| >sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 292/772 (37%), Positives = 408/772 (52%), Gaps = 64/772 (8%)
Query: 13 FLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSE 72
FLC+ +L+F +S+S + YIV + +S + + D ++ L L E
Sbjct: 7 FLCIIFLLFCSSSSEILQKQTYIVQLHPNSETAKTFASKFDWHLSFLQEAVLGVEEEEEE 66
Query: 73 ESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAA 132
S RL ++ Y A +GF+A LT+SEA L VV+V PD VLQ+ TT S+ FL
Sbjct: 67 PSSRL--LYSYGSAIEGFAAQLTESEAEILRYSPEVVAVRPDHVLQVQTTYSYKFLGLDG 124
Query: 133 KPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKS 192
W ++ + +IGV+DTG+WPESPSF+D GM IP +WKG+C E F S
Sbjct: 125 FGNSGVWSKSRFGQGT---IIGVLDTGVWPESPSFDDTGMPSIPRKWKGICQEGESFSSS 181
Query: 193 HCNRKLIGAR---HCSRASTNKDNSG-------SSRDPLGHGTHTASTAAGNYVSNAIYF 242
CNRKLIGAR R + + + S S+RD GHGTHTAST G+ VS A
Sbjct: 182 SCNRKLIGARFFIRGHRVANSPEESPNMPREYISARDSTGHGTHTASTVGGSSVSMANVL 241
Query: 243 GLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADY 302
G G ARG +P + IA YK C GC + IL AID AI D VD++S+S+G
Sbjct: 242 GNGAGVARGMAPGAHIAVYKVCWFNGCYSSDILAAIDVAIQDKVDVLSLSLG--GFPIPL 299
Query: 303 MNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGN 362
+D IAIG A +RG+ VIC+AGN+GP +VANTAPW+ T+ A T+DR F + V L N
Sbjct: 300 YDDTIAIGTFRAMERGISVICAAGNNGPIESSVANTAPWVSTIGAGTLDRRFPAVVRLAN 359
Query: 363 GKAIKGTAISLSNLSRSKTYPLAYGKAI-----AVNSTLVSQASQ----CLYTTLYPMDT 413
GK + G ++ YP GK I V V+ + CL +L +
Sbjct: 360 GKLLYGESL----------YP---GKGIKNAGREVEVIYVTGGDKGSEFCLRGSLPREEI 406
Query: 414 RGRKIAVAENV-----------EAQGLIFINDDEKIWPTERGI----LPYAEVGKVAGFR 458
RG+ + V EA G+ I + +I E I LP +G
Sbjct: 407 RGKMVICDRGVNGRSEKGEAVKEAGGVAMILANTEINQEEDSIDVHLLPATLIGYTESVL 466
Query: 459 IINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAA 518
+ Y+N+ P A I+ T+ AP VA FS+RGP L +ILKPD+ APGV ++AA
Sbjct: 467 LKAYVNATVKPKARIIFGGTVIGRSRAPEVAQFSARGPSLANPSILKPDMIAPGVNIIAA 526
Query: 519 IVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTA 578
P+ P G+P + + + SGTSM+CPHV+G A I+S W+ + IKSALMTTA
Sbjct: 527 W-PQNLGPTGLPYDSRRVNFTVMSGTSMSCPHVSGITALIRSAYPNWSPAAIKSALMTTA 585
Query: 579 TVYDNTGTPLTNSSGNN-ANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKK 637
+YD G + + GN A +GAG +NP KA+NPGLV+ DY+ +LC G+++
Sbjct: 586 DLYDRQGKAIKD--GNKPAGVFAIGAGHVNPQKAINPGLVYNIQPVDYITYLCTLGFTRS 643
Query: 638 NIRSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISM 697
+I ++T+ +C ++NYPSI++ R + R VTNVGSPN+ Y
Sbjct: 644 DILAITHKNVSCNGILRKNPGFSLNYPSIAVI-FKRGKTTEMITRRVTNVGSPNSIYSVN 702
Query: 698 VNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSG-----YNYGSITW 744
V AP G+ V V P++L F LS++ F K+ + G + G +TW
Sbjct: 703 VKAPEGIKVIVNPKRLVFKHVDQTLSYRVWFVLKKKNRGGKVASFAQGQLTW 754
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Serine protease involved in the negative regulation of stomatal density and distribution. Positive regulator of water use efficiency (WUE). Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 277/739 (37%), Positives = 403/739 (54%), Gaps = 58/739 (7%)
Query: 34 YIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAI 93
YI+Y+G ++ E H+ LLSS+ S+E + ++ Y AF F+A
Sbjct: 38 YIIYLG---------DRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAK 88
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDF--LAAAAKPAKNTWFNHKYHKAASDI 151
L+ EA + + VVSV + +LHTT+SWDF L AK ++ KA D+
Sbjct: 89 LSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLPLTAK---------RHLKAERDV 139
Query: 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNK 211
+IGV+DTGI P+S SF D G+G P++WKG C +F + CN K+IGA++
Sbjct: 140 IIGVLDTGITPDSESFLDHGLGPPPAKWKGSCGPYKNF--TGCNNKIIGAKYFKHDGNVP 197
Query: 212 DNSGSSRDPL---GHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+G R P+ GHGTHT+ST AG V+NA +G+A GTARG P +R+A YK C
Sbjct: 198 --AGEVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARLAMYKVCWARS 255
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
GC+ IL + AIHDGV+IISIS + ADY +D I++G+ HA ++G++ + SAGN
Sbjct: 256 GCADMDILAGFEAAIHDGVEIISIS--IGGPIADYSSDSISVGSFHAMRKGILTVASAGN 313
Query: 328 DGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYG 387
DGP TV N PW+ TVAAS IDR F+S + LGNGK+ G IS+ + ++K+YPL G
Sbjct: 314 DGPSSGTVTNHEPWILTVAASGIDRTFKSKIDLGNGKSFSGMGISMFS-PKAKSYPLVSG 372
Query: 388 KAIAVNSTLVSQASQCLYTTLYPMDTRGRKI-------AVAENVEAQG--LIFINDDEKI 438
A N+ A C +L +G+ + V +++ G I D+ +
Sbjct: 373 VDAAKNTDDKYLARYCFSDSLDRKKVKGKVMVCRMGGGGVESTIKSYGGAGAIIVSDQYL 432
Query: 439 WPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPT--VTIPRHRPAPVVAYFSSRGP 496
+ + P V G I YINS ++ +A I T VTI PAP VA FSSRGP
Sbjct: 433 DNAQIFMAPATSVNSSVGDIIYRYINSTRSASAVIQKTRQVTI----PAPFVASFSSRGP 488
Query: 497 GLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAA 556
+ +LKPD+AAPG+ +LAA + G+ + + + + SGTSMACPHV G AA
Sbjct: 489 NPGSIRLLKPDIAAPGIDILAAFTLKRSLT-GLDGDTQFSKFTILSGTSMACPHVAGVAA 547
Query: 557 FIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGL 616
++KS WT + IKSA++T+A P++ +A G G+INP +A +PGL
Sbjct: 548 YVKSFHPDWTPAAIKSAIITSA-------KPISRRVNKDAE-FAYGGGQINPRRAASPGL 599
Query: 617 VFKTTIKDYLRFLCYYGYSKKNIRSMTNT-TFNCPKKSSAKLISNINYPSISIS-KLARQ 674
V+ Y++FLC GY+ + + T + +C ++NYP+I ++ + A+
Sbjct: 600 VYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRSAKT 659
Query: 675 GAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEAS 734
+ +R VTNVG P++ Y + V AP G+ + V PQ L+F + K SFK K+ +
Sbjct: 660 STLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKASQKRSFKVVVKAKQMT 719
Query: 735 SGYNY-GSITWSDDRHSVR 752
G G + W RHSVR
Sbjct: 720 PGKIVSGLLVWKSPRHSVR 738
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 157/641 (24%), Positives = 260/641 (40%), Gaps = 130/641 (20%)
Query: 81 HHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAA--AAKP---- 134
Y+ F GFS L +E L V +V+P+ + + D + A P
Sbjct: 104 REYEQVFSGFSMKLPANEIPKLLAVKDVKAVYPNVTYKTDNMKDKDVTISEDAVSPQMDD 163
Query: 135 ------AKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPD 188
A + W I + +IDTG+ +N PD
Sbjct: 164 SAPYIGANDAW---DLGYTGKGIKVAIIDTGV-----EYN-----------------HPD 198
Query: 189 FKKSHCNRK---LIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLA 245
KK+ K + + + + D G + D HGTH A T A N
Sbjct: 199 LKKNFGQYKGYDFVDNDYDPKETPTGDPRGEATD---HGTHVAGTVAAN----------- 244
Query: 246 GGTARGGSPFSRIASYKACKEGGCSGAA-ILQAIDDAIHDGVDIISISIGLSNSEADYMN 304
GT +G +P + + +Y+ GG ++ ++ A+ DG D++++S+G S + D+
Sbjct: 245 -GTIKGVAPDATLLAYRVLGPGGSGTTENVIAGVERAVQDGADVMNLSLGNSLNNPDWAT 303
Query: 305 DPIAIGALH-AQQRGVVVICSAGNDGPYPFTVAN--TAPWLFTVAASTIDRD-------- 353
AL A GVV + S GN GP +TV + T+ +V A+ + +
Sbjct: 304 ST----ALDWAMSEGVVAVTSNGNSGPNGWTVGSPGTSREAISVGATQLPLNEYAVTFGS 359
Query: 354 FQSTVLLG-----NGKAIKGTAISL--SNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYT 406
+ S ++G + KA+ + L + + +K + GK + +V + S
Sbjct: 360 YSSAKVMGYNKEDDVKALNNKEVELVEAGIGEAKDFE---GKDLTGKVAVVKRGSIAF-- 414
Query: 407 TLYPMDTRGRKIAVAENVEAQG----LIFINDDEKIWPTERGI-LPYAEVGKVAGFRIIN 461
+ A+N + G +++ N +I G+ +P ++ G ++++
Sbjct: 415 -----------VDKADNAKKAGAIGMVVYNNLSGEIEANVPGMSVPTIKLSLEDGEKLVS 463
Query: 462 YINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAI-V 520
+ + + T L T+ + VA FSSRGP + T ++KPD++APGV +++ I
Sbjct: 464 ALKAGETKTTFKL---TVSKAL-GEQVADFSSRGPVMDTW-MIKPDISAPGVNIVSTIPT 518
Query: 521 PRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATV 580
PD P G Y + GTSMA PH+ GA A IK + KW+ IK+A+M
Sbjct: 519 HDPDHPYG---------YGSKQGTSMASPHIAGAVAVIKQAKPKWSVEQIKAAIM----- 564
Query: 581 YDNTGTPLTNSSGNNANPHE-MGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNI 639
NT L +S G PH GAG + A+ + Y FL K+N
Sbjct: 565 --NTAVTLKDSDG-EVYPHNAQGAGSARIMNAIKADSLVSPGSYSYGTFL------KENG 615
Query: 640 RSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTV 680
N TF +SS + + Y S + S ++ G R V
Sbjct: 616 NETKNETFTIENQSSIRKSYTLEY-SFNGSGISTSGTSRVV 655
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Not required for growth or sporulation. Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
| >sp|P0DD35|C5AP_STRPQ C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=scpA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 172/425 (40%), Gaps = 73/425 (17%)
Query: 223 HGTHTASTAAGNYVSNAIY-FGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDA 281
HGTH + +GN S + L G R+ + + A QAI DA
Sbjct: 195 HGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYA---QAIRDA 251
Query: 282 IHDGVDIISISIGLSNSEADYMN--DPIAIGALHAQQRGVVVICSAGNDGPY-------- 331
++ G +I++S G N+ Y N D +A+ +GV ++ SAGND +
Sbjct: 252 VNLGAKVINMSFG--NAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPL 309
Query: 332 ----PFTVANT---APWLFTVAASTIDRDFQ--STVLLGNGKAIKGTAISLSNLSRSKTY 382
+ V T A TVA+ + D+ +TV + + + +S + +K Y
Sbjct: 310 ADHPDYGVVGTPAAADSTLTVASYSPDKQLTETATVKTADQQDKEMPVLSTNRFEPNKAY 369
Query: 383 PLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442
AY + +D + KIA A+ A G++ ++ +K +P E
Sbjct: 370 DYAYANRGTKEDDFKDVKGKIALIERGDIDFKD-KIANAKKAGAVGVLIYDNQDKGFPIE 428
Query: 443 R---GILPYAEVGKVAGFRIINYINSNK----NPTATILPTVTIPRHRPAPVVAYFSSRG 495
+P A + + G + + NS K N T +LPT + + ++ FSS G
Sbjct: 429 LPNVDQMPAAFISRKDGLLLKD--NSKKTITFNATPKVLPTASGTK------LSRFSSWG 480
Query: 496 PGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAA 555
L + +KPD+AAPG +L+++ A K YA SGTSM+ P V G
Sbjct: 481 --LTADGNIKPDIAAPGQDILSSV-----------ANNK---YAKLSGTSMSAPLVAGIM 524
Query: 556 AFIKSVRRKWTYSMI--------KSALMTTAT-VYDNTGTPLTNSSGNNANPHEMGAGEI 606
++ M K LM++AT +YD +P + GAG +
Sbjct: 525 GLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAY-------FSPRQQGAGAV 577
Query: 607 NPLKA 611
+ KA
Sbjct: 578 DAKKA 582
|
This virulence factor of S.pyogenes specifically cleaves the human serum chemotaxin C5a at '68-Lys-|-Asp-69' bond near its C-terminus, destroying its ability to serve as a chemoattractant. Streptococcus pyogenes serotype M3 (strain SSI-1) (taxid: 193567) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 1 EC: 1 EC: 0 |
| >sp|P0DD34|C5AP_STRP3 C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=scpA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 172/425 (40%), Gaps = 73/425 (17%)
Query: 223 HGTHTASTAAGNYVSNAIY-FGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDA 281
HGTH + +GN S + L G R+ + + A QAI DA
Sbjct: 195 HGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYA---QAIRDA 251
Query: 282 IHDGVDIISISIGLSNSEADYMN--DPIAIGALHAQQRGVVVICSAGNDGPY-------- 331
++ G +I++S G N+ Y N D +A+ +GV ++ SAGND +
Sbjct: 252 VNLGAKVINMSFG--NAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPL 309
Query: 332 ----PFTVANT---APWLFTVAASTIDRDFQ--STVLLGNGKAIKGTAISLSNLSRSKTY 382
+ V T A TVA+ + D+ +TV + + + +S + +K Y
Sbjct: 310 ADHPDYGVVGTPAAADSTLTVASYSPDKQLTETATVKTADQQDKEMPVLSTNRFEPNKAY 369
Query: 383 PLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442
AY + +D + KIA A+ A G++ ++ +K +P E
Sbjct: 370 DYAYANRGTKEDDFKDVKGKIALIERGDIDFKD-KIANAKKAGAVGVLIYDNQDKGFPIE 428
Query: 443 R---GILPYAEVGKVAGFRIINYINSNK----NPTATILPTVTIPRHRPAPVVAYFSSRG 495
+P A + + G + + NS K N T +LPT + + ++ FSS G
Sbjct: 429 LPNVDQMPAAFISRKDGLLLKD--NSKKTITFNATPKVLPTASGTK------LSRFSSWG 480
Query: 496 PGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAA 555
L + +KPD+AAPG +L+++ A K YA SGTSM+ P V G
Sbjct: 481 --LTADGNIKPDIAAPGQDILSSV-----------ANNK---YAKLSGTSMSAPLVAGIM 524
Query: 556 AFIKSVRRKWTYSMI--------KSALMTTAT-VYDNTGTPLTNSSGNNANPHEMGAGEI 606
++ M K LM++AT +YD +P + GAG +
Sbjct: 525 GLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAY-------FSPRQQGAGAV 577
Query: 607 NPLKA 611
+ KA
Sbjct: 578 DAKKA 582
|
This virulence factor of S.pyogenes specifically cleaves the human serum chemotaxin C5a at '68-Lys-|-Asp-69' bond near its C-terminus, destroying its ability to serve as a chemoattractant. Streptococcus pyogenes serotype M3 (taxid: 301448) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 1 EC: 1 EC: 0 |
| >sp|P15926|C5AP_STRPY C5a peptidase OS=Streptococcus pyogenes GN=scpA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 171/425 (40%), Gaps = 73/425 (17%)
Query: 223 HGTHTASTAAGNYVSNAIY-FGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDA 281
HGTH + +GN S + L G R+ + + A QAI DA
Sbjct: 193 HGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYA---QAIRDA 249
Query: 282 IHDGVDIISISIGLSNSEADYMN--DPIAIGALHAQQRGVVVICSAGNDGPY-------- 331
++ G +I++S G N+ Y N D +A+ +GV ++ SAGND +
Sbjct: 250 VNLGAKVINMSFG--NAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPL 307
Query: 332 ----PFTVANT---APWLFTVAASTIDRDFQSTVLL--GNGKAIKGTAISLSNLSRSKTY 382
+ V T A TVA+ + D+ T ++ + + + +S + +K Y
Sbjct: 308 ADHPDYGVVGTPAAADSTLTVASYSPDKQLTETAMVKTDDQQDKEMPVLSTNRFEPNKAY 367
Query: 383 PLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442
AY + +D + K+A A+ A G++ ++ +K +P E
Sbjct: 368 DYAYANRGMKEDDFKDVKGKIALIERGDIDFKD-KVANAKKAGAVGVLIYDNQDKGFPIE 426
Query: 443 R---GILPYAEVGKVAGFRIINYINSNK----NPTATILPTVTIPRHRPAPVVAYFSSRG 495
+P A + + G + + N K N T +LPT + + ++ FSS G
Sbjct: 427 LPNVDQMPAAFISRKDGLLLKD--NPQKTITFNATPKVLPTASGTK------LSRFSSWG 478
Query: 496 PGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAA 555
L + +KPD+AAPG +L+++ A K YA SGTSM+ P V G
Sbjct: 479 --LTADGNIKPDIAAPGQDILSSV-----------ANNK---YAKLSGTSMSAPLVAGIM 522
Query: 556 AFIKSVRRKWTYSMI--------KSALMTTAT-VYDNTGTPLTNSSGNNANPHEMGAGEI 606
++ M K LM++AT +YD +P + GAG +
Sbjct: 523 GLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAY-------FSPRQQGAGAV 575
Query: 607 NPLKA 611
+ KA
Sbjct: 576 DAKKA 580
|
This virulence factor of S.pyogenes specifically cleaves the human serum chemotaxin C5a at '68-Lys-|-Asp-69' bond near its C-terminus, destroying its ability to serve as a chemoattractant. Streptococcus pyogenes (taxid: 1314) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 1 EC: 1 EC: 0 |
| >sp|P15293|P2P_LACLC PII-type proteinase OS=Lactococcus lactis subsp. cremoris GN=prt PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 213/542 (39%), Gaps = 111/542 (20%)
Query: 139 WFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKK------- 191
W N+KY + V+ VID+GI P+ D + S K V + D +K
Sbjct: 201 WSNYKYKGEGT--VVSVIDSGI---DPTHKDMRL----SDDKDVKLTKSDVEKFTDTAKH 251
Query: 192 -SHCNRKL-IGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTA 249
+ N K+ G + T D++ + HG H A N G A
Sbjct: 252 GRYFNSKVPYGFNYADNNDTITDDTVDEQ----HGMHVAGIIGAN--------GTGDDPA 299
Query: 250 R---GGSPFSRIASYKACKEGGCSG----AAILQAIDDAIHDGVDIISISIGLSNSEADY 302
+ G +P +++ + K S A ++ AI+D+ G D++++S+G S+S
Sbjct: 300 KSVVGVAPEAQLLAMKVFTNSDTSATTGSATLVSAIEDSAKIGADVLNMSLG-SDSGNQT 358
Query: 303 MNDPIAIGALHAQQRGVVVICSAGNDGP------------YPFT------VANTAPWLFT 344
+ DP +A + G + SAGN G Y T+ T
Sbjct: 359 LEDPELAAVQNANESGTAAVISAGNSGTSGSATEGVNKDYYGLQDNEMVGTPGTSRGATT 418
Query: 345 VA-ASTIDRDFQS-TVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQ 402
VA A D Q+ T+ G G + I LS+ + ++ + S +S+
Sbjct: 419 VASAENTDVITQAVTITDGTGLQLGPETIQLSSNDFTGSFDQKKFYVVKDASGNLSKGKV 478
Query: 403 CLYTTLYPMDTRGRKIAVAENVE--------------AQGLIFINDDEKIWPTERGIL-- 446
YT D +G KIA+ + E A GLI +N+D P L
Sbjct: 479 ADYT----ADAKG-KIAIVKRGELTFADKQKYAQAAGAAGLIIVNNDGTATPVTSMALTT 533
Query: 447 --PYAEVGKVAGFRIINYINSNKNPTATILPTVT-IPRHR-PAPVVAYFSSRGPGLPTEN 502
P + V G ++++++ ++ + + + +T +P + ++ F+S GP N
Sbjct: 534 TFPTFGLSSVTGQKLVDWVAAHPDDSLGVKIALTLVPNQKYTEDKMSDFTSYGP---VSN 590
Query: 503 I-LKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSV 561
+ KPD+ APG G I + + Y SGTSMA P + G+ A +K
Sbjct: 591 LSFKPDITAPG--------------GNIWSTQNNNGYTNMSGTSMASPFIAGSQALLKQA 636
Query: 562 RRKWT------YSMIKSALMTT--ATVYDNTGTPLTNSSGNN--ANPHEMGAGEINPLKA 611
Y +K +T TV NT P+ + + NN +P GAG ++ A
Sbjct: 637 LNNKNNPFYAYYKQLKGTALTDFLKTVEMNTAQPINDINYNNVIVSPRRQGAGLVDVKAA 696
Query: 612 LN 613
++
Sbjct: 697 ID 698
|
Protease which breaks down milk proteins during the growth of the bacteria on milk. Lactococcus lactis subsp. cremoris (taxid: 1359) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 9 EC: 6 |
| >sp|Q5X9R0|C5AP_STRP6 C5a peptidase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=scpA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 170/425 (40%), Gaps = 73/425 (17%)
Query: 223 HGTHTASTAAGNYVSNAIY-FGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDA 281
HGTH + +GN S + L G R+ + + A QAI DA
Sbjct: 193 HGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYA---QAIRDA 249
Query: 282 IHDGVDIISISIGLSNSEADYMN--DPIAIGALHAQQRGVVVICSAGNDGPY-------- 331
++ G +I++S G N+ Y N D +A+ +GV ++ SAGND +
Sbjct: 250 VNLGAKVINMSFG--NAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPL 307
Query: 332 ----PFTVANT---APWLFTVAASTIDRDFQ--STVLLGNGKAIKGTAISLSNLSRSKTY 382
+ V T A TVA+ + D+ +TV + + + +S + +K Y
Sbjct: 308 ADHPDYGVVGTPAAADSTLTVASYSPDKQLTETATVKTADQQDKEMPVLSTNRFEPNKAY 367
Query: 383 PLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442
AY + +D + KIA A+ A G++ ++ +K +P E
Sbjct: 368 DYAYANRGMKEDDFKDVKGKIALIERGDIDFKD-KIANAKKAGAVGVLIYDNQDKGFPIE 426
Query: 443 R---GILPYAEVGKVAGFRIINYINSNK----NPTATILPTVTIPRHRPAPVVAYFSSRG 495
+P A + + G + N K N T +LPT + + ++ FSS G
Sbjct: 427 LPNVDQMPAAFISRKDGLLLKE--NPQKTITFNATPKVLPTASGTK------LSRFSSWG 478
Query: 496 PGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAA 555
L + +KPD+AAPG +L+++ A K YA SGTSM+ P V G
Sbjct: 479 --LTADGNIKPDIAAPGQDILSSV-----------ANNK---YAKLSGTSMSAPLVAGIM 522
Query: 556 AFIKSVRRKWTYSMI--------KSALMTTAT-VYDNTGTPLTNSSGNNANPHEMGAGEI 606
++ M K LM++AT +YD +P + GAG +
Sbjct: 523 GLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEKAY-------FSPRQQGAGAV 575
Query: 607 NPLKA 611
+ KA
Sbjct: 576 DAKKA 580
|
This virulence factor of S.pyogenes specifically cleaves the human serum chemotaxin C5a at '68-Lys-|-Asp-69' bond near its C-terminus, destroying its ability to serve as a chemoattractant. Streptococcus pyogenes serotype M6 (taxid: 301450) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 1 EC: 1 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 760 | ||||||
| 255569223 | 777 | Xylem serine proteinase 1 precursor, put | 0.956 | 0.935 | 0.634 | 0.0 | |
| 356554917 | 777 | PREDICTED: subtilisin-like protease-like | 0.986 | 0.965 | 0.601 | 0.0 | |
| 225465381 | 777 | PREDICTED: subtilisin-like protease [Vit | 0.959 | 0.938 | 0.606 | 0.0 | |
| 224073086 | 741 | predicted protein [Populus trichocarpa] | 0.943 | 0.967 | 0.632 | 0.0 | |
| 356546290 | 778 | PREDICTED: subtilisin-like protease-like | 0.981 | 0.958 | 0.593 | 0.0 | |
| 449516513 | 738 | PREDICTED: subtilisin-like protease-like | 0.931 | 0.959 | 0.603 | 0.0 | |
| 449458133 | 733 | PREDICTED: subtilisin-like protease-like | 0.913 | 0.946 | 0.6 | 0.0 | |
| 242057023 | 790 | hypothetical protein SORBIDRAFT_03g01130 | 0.975 | 0.937 | 0.517 | 0.0 | |
| 414877062 | 782 | TPA: putative subtilase family protein [ | 0.973 | 0.946 | 0.514 | 0.0 | |
| 125525399 | 788 | hypothetical protein OsI_01395 [Oryza sa | 0.969 | 0.935 | 0.497 | 0.0 |
| >gi|255569223|ref|XP_002525580.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] gi|223535159|gb|EEF36839.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/760 (63%), Positives = 579/760 (76%), Gaps = 33/760 (4%)
Query: 26 SSNEIPKPYIVYMGSSSRSNLIIQN-GEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYK 84
SS++ P+ YIVYMGSS N+ +N + VE A H+QLLSSIIPS ESER+SL+HHY
Sbjct: 26 SSSQTPQQYIVYMGSSGNGNVGGENTDQSVESA---HLQLLSSIIPSHESERISLVHHYS 82
Query: 85 HAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKY 144
HAF GFSA+LT+ EAS LSGH+ VVSVF DP L+LHTTRSWDFL A + + KY
Sbjct: 83 HAFTGFSAMLTEIEASELSGHERVVSVFKDPTLKLHTTRSWDFLEANS----GMQSSQKY 138
Query: 145 HKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHC 204
+SD++IGVIDTGIWPESPSF+D+G+GEIPSRWKGVCME DFKKS+CNRKLIGAR+
Sbjct: 139 SHLSSDVIIGVIDTGIWPESPSFSDKGLGEIPSRWKGVCMEGHDFKKSNCNRKLIGARYY 198
Query: 205 SR-ASTNKDN-------SGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFS 256
T K+N +GS RD +GHGTHTAS A G V+N Y+GLA GTARGGSP S
Sbjct: 199 DTILRTYKNNKTHVAKPNGSPRDDIGHGTHTASIAGGAEVANVSYYGLARGTARGGSPSS 258
Query: 257 RIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNS-EADYMNDPIAIGALHAQ 315
R+A YKAC GC+G+ ILQAIDDAI DGVD+ISISIGLS+ ++DY+NDPIAIGA HAQ
Sbjct: 259 RLAIYKACTTDGCAGSTILQAIDDAIKDGVDVISISIGLSSIFQSDYLNDPIAIGAFHAQ 318
Query: 316 QRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375
Q GV++ICSAGNDGP P+T+ N+APW+FTVAAS IDRDFQST++LGNGK +G+AI+ SN
Sbjct: 319 QMGVMIICSAGNDGPDPYTIVNSAPWIFTVAASNIDRDFQSTMILGNGKTFRGSAINFSN 378
Query: 376 LSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR---------------KIAV 420
L RS+TYPLA+G A N T VS+A C +L G+ K V
Sbjct: 379 LKRSRTYPLAFGGNAAANFTPVSEARNCYPGSLDRAKVAGKIVVCIDNDPSIPRRIKKLV 438
Query: 421 AENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIP 480
E+ A+GLI IN+ E+ P + G+ P+AEVG +AG +++ YINS K PTATILP V +P
Sbjct: 439 VEDARAKGLILINEVEEGVPFDSGVFPFAEVGNIAGTQLLKYINSTKKPTATILPAVDVP 498
Query: 481 RHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYAL 540
R+RPAPVVAYFSSRGP TENILKPD+ APGVA+LAAI P+ + G +P G+KPA YA+
Sbjct: 499 RYRPAPVVAYFSSRGPAQLTENILKPDIMAPGVAILAAITPK-NESGSVPVGKKPAGYAI 557
Query: 541 RSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHE 600
RSGTSMACPHVTGAAAFIKSV + W+ S I+SALMTTA +Y+N G PLTNSS + +NPHE
Sbjct: 558 RSGTSMACPHVTGAAAFIKSVHQGWSSSRIRSALMTTANIYNNMGKPLTNSSSSYSNPHE 617
Query: 601 MGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISN 660
MG GEINPL AL+PGLVF+TT +DYL+FLCYYGYS+KNIRSM+NT FNCP+ S KLISN
Sbjct: 618 MGVGEINPLSALDPGLVFETTTEDYLQFLCYYGYSEKNIRSMSNTNFNCPRVSFDKLISN 677
Query: 661 INYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGII 720
INYPS+SISKL R RTVKR VTNVGSPN+TY++ + AP GL VKV P+KL F EG+
Sbjct: 678 INYPSVSISKLDRHQPARTVKRIVTNVGSPNSTYVTTLQAPQGLEVKVTPKKLIFKEGVS 737
Query: 721 KLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFAVDVE 760
+ SFK SF GK A+ GYNYGS+TW D HSVR+ FAV VE
Sbjct: 738 RKSFKISFNGKMATKGYNYGSVTWVDGTHSVRLTFAVYVE 777
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356554917|ref|XP_003545787.1| PREDICTED: subtilisin-like protease-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/778 (60%), Positives = 586/778 (75%), Gaps = 28/778 (3%)
Query: 7 LLQLLPFLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLS 66
L Q L FL + L+ ++ S++IPKPY+VYMG+SS +N+ G + +I + +H+ LLS
Sbjct: 4 LQQFLHFLFVASLLISSTAISDQIPKPYVVYMGNSSPNNI----GVEGQILESSHLHLLS 59
Query: 67 SIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWD 126
SIIPSE+SER++L HH+ HAF GFSA+LT+ EASALSGHD VVSVFPDPVLQLHTTRSWD
Sbjct: 60 SIIPSEQSERIALTHHFSHAFSGFSALLTEGEASALSGHDSVVSVFPDPVLQLHTTRSWD 119
Query: 127 FLAAAAKPAKNTWFNHKYHK-AASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCME 185
FL + ++ K H+ ++SDI+IGVIDTGIWPESPSF D+G+GEIPSRWKGVCME
Sbjct: 120 FLESDLGMKPYSYGTPKLHQHSSSDIIIGVIDTGIWPESPSFRDEGIGEIPSRWKGVCME 179
Query: 186 SPDFKKSHCNRKLIGARHCSRASTNKDNS-------GSSRDPLGHGTHTASTAAGNYVSN 238
DFKKS+CNRKLIGAR+ + +T+ DN GS RD +GHGTHTAS AAG +V+N
Sbjct: 180 GSDFKKSNCNRKLIGARYYNILATSGDNQTHIEATKGSPRDSVGHGTHTASIAAGVHVNN 239
Query: 239 AIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNS 298
A YFGLA GTARGGSP +RIA+YK C + GCSGA IL+AIDDA+ DGVDIISISIGLS+
Sbjct: 240 ASYFGLAQGTARGGSPSTRIAAYKTCSDEGCSGATILKAIDDAVKDGVDIISISIGLSSL 299
Query: 299 -EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQST 357
++D+++DPIAIGA HA+Q+GV+V+CSAGNDGP PFTV NTAPW+FT+AAS IDR+FQST
Sbjct: 300 FQSDFLSDPIAIGAFHAEQKGVLVVCSAGNDGPDPFTVVNTAPWIFTIAASNIDRNFQST 359
Query: 358 VLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLY-------- 409
++LGNGK +GT I+ SNL+ SK + L +G+ +A S+A C +L
Sbjct: 360 IVLGNGKYFQGTGINFSNLTHSKMHRLVFGEQVAAKFVPASEARNCFPGSLDFNKTAGSI 419
Query: 410 -------PMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINY 462
P +R K V ++ A G+I IN+D K P + G P+ +VG + G +I+ Y
Sbjct: 420 VVCVNDDPTVSRQIKKLVVQDARAIGIILINEDNKDAPFDAGAFPFTQVGNLEGHQILQY 479
Query: 463 INSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPR 522
INS KNPTATILPT + R +P+P+VA FSSRGP TEN+LKPDV APGV +LAA++P+
Sbjct: 480 INSTKNPTATILPTTEVSRLKPSPIVASFSSRGPSSLTENVLKPDVMAPGVGILAAVIPK 539
Query: 523 PDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYD 582
PG +P G+KP+ YA++SGTSMACPHVTGAAAFIKSV KW+ SMIKSALMTTAT Y+
Sbjct: 540 TKEPGSVPIGKKPSLYAIKSGTSMACPHVTGAAAFIKSVHTKWSSSMIKSALMTTATNYN 599
Query: 583 NTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSM 642
N PLTNSS + A+PHEMG GEINPL+ALNPGLVF+T ++DYLRFLCY+GYS+K IRSM
Sbjct: 600 NLRKPLTNSSNSIADPHEMGVGEINPLRALNPGLVFETDVEDYLRFLCYFGYSQKIIRSM 659
Query: 643 TNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPS 702
+ T FNCPK SS LISN+NYPSIS+S L +Q + + R VTNVGS NATY + V AP
Sbjct: 660 SKTNFNCPKNSSEGLISNVNYPSISVSTLKKQQKAKVITRKVTNVGSLNATYTAKVLAPE 719
Query: 703 GLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFAVDVE 760
GL VKV P KL F EG+ ++++K SF+GKEA SGYN+GS+TW D H V +FAV VE
Sbjct: 720 GLVVKVIPNKLVFSEGVQRMTYKVSFYGKEARSGYNFGSLTWLDGHHYVHTVFAVKVE 777
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465381|ref|XP_002273703.1| PREDICTED: subtilisin-like protease [Vitis vinifera] gi|296085427|emb|CBI29159.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/765 (60%), Positives = 576/765 (75%), Gaps = 36/765 (4%)
Query: 23 ASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHH 82
A+++ NEIPK Y+VYMG SS +G + E+A+ +H+QLLS+IIPS ESER+SLIH
Sbjct: 22 AASNENEIPKSYVVYMGKSSN-----NHGGEAEVAESSHLQLLSAIIPSSESERISLIHS 76
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNH 142
Y HAFKGFSA+LT EAS LSGH+ +VS+FPDP+LQLHTTRSWDFL + F+H
Sbjct: 77 YNHAFKGFSAMLTQGEASILSGHEEIVSIFPDPLLQLHTTRSWDFLNVESGITSTPLFHH 136
Query: 143 KYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR 202
+ D++IGVIDTGIWPESPSF+D G+GEIPSRWKGVCME DFKKS+CNRKLIGAR
Sbjct: 137 NLSR---DVIIGVIDTGIWPESPSFSDNGIGEIPSRWKGVCMEGSDFKKSNCNRKLIGAR 193
Query: 203 HCS--------RASTNKDN----SGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTAR 250
+ + ++S+NK + +GS RD +GHGTHTAS AAG ++NA Y+GLA GTAR
Sbjct: 194 YYNTPKALIQPKSSSNKSHPINLTGSPRDSVGHGTHTASIAAGAPIANASYYGLAPGTAR 253
Query: 251 GGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSN-SEADYMNDPIAI 309
GGSP +RIASYKAC GCSG+ I++A DDAI DGVDIIS+SIG+++ ++D++NDPIAI
Sbjct: 254 GGSPSARIASYKACSLEGCSGSTIMKAFDDAIKDGVDIISVSIGMTSIFQSDFLNDPIAI 313
Query: 310 GALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGT 369
GA HAQQ GV+V+CSAGN GP P+T+ N+APW+FTVAAS IDRDFQSTV+LGNGK G
Sbjct: 314 GAFHAQQMGVMVVCSAGNSGPDPYTIVNSAPWIFTVAASNIDRDFQSTVVLGNGKTFPGP 373
Query: 370 AISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIA---------- 419
AI+ SNL+RSKTYPLA + +A T S A C +L P RG+ I
Sbjct: 374 AINFSNLTRSKTYPLARSEDVAAAFTPSSDARSCYPGSLDPKKVRGKIIVCSGDGSNPRR 433
Query: 420 ----VAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILP 475
V E+ +A G+I I++ +K P E GI P+ EVG +AGF I+ YINS KNPTATILP
Sbjct: 434 IQKLVVEDAKAIGMILIDEYQKGSPFESGIYPFTEVGDIAGFHILKYINSTKNPTATILP 493
Query: 476 TVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKP 535
T +PR RPAPVVA+FSSRGPG TENILKPD+ APGVA+LAA++P+ + G +P G K
Sbjct: 494 TKEVPRIRPAPVVAFFSSRGPGGLTENILKPDIMAPGVAILAAMIPKTEV-GSVPIGRKV 552
Query: 536 ATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNN 595
+ + +RSGTSMACPHVTGAAAFIKSV +W+ SMI+SALMTTA + +N LTNS+G +
Sbjct: 553 SKFGIRSGTSMACPHVTGAAAFIKSVHPQWSSSMIRSALMTTAIISNNMRKDLTNSTGFS 612
Query: 596 ANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSA 655
ANPHEMG GEI+PL+ALNPGLVF+T +DYL FLCYYGY +K IR++ N F CP S
Sbjct: 613 ANPHEMGVGEISPLRALNPGLVFETASEDYLHFLCYYGYPEKTIRAVANKKFTCPSTSFD 672
Query: 656 KLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTF 715
+LISNINYPSISISKL R A +TV RTV NVGSPN+TYI+ ++AP GL + V P+K+ F
Sbjct: 673 ELISNINYPSISISKLDRHLAAQTVTRTVRNVGSPNSTYIAQLHAPVGLEITVSPKKIVF 732
Query: 716 VEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFAVDVE 760
VEG+ + +FK SF GKEAS GY++GSITW D HSVR +FAV+VE
Sbjct: 733 VEGLERATFKVSFKGKEASRGYSFGSITWFDGLHSVRTVFAVNVE 777
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073086|ref|XP_002303965.1| predicted protein [Populus trichocarpa] gi|222841397|gb|EEE78944.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/750 (63%), Positives = 570/750 (76%), Gaps = 33/750 (4%)
Query: 34 YIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAI 93
Y+VYMGSSS GE EIA+ H+QLLSSIIPS ESER+SLIHHY HAFKGFSA+
Sbjct: 1 YVVYMGSSSSG----NGGEAPEIAEAGHLQLLSSIIPSHESERISLIHHYSHAFKGFSAM 56
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVI 153
LT++EAS L+GHD +VS+F DP+LQLHTTRSWDFL A++ HK+ +SD++I
Sbjct: 57 LTENEASVLAGHDGIVSIFRDPILQLHTTRSWDFLEASSGMQNK----HKHPPLSSDVII 112
Query: 154 GVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRA----ST 209
G+IDTGIWPESPSFND G+GEIPSRWKGVCME DFKKS+CNRKLIGAR+ S
Sbjct: 113 GMIDTGIWPESPSFNDDGIGEIPSRWKGVCMEGYDFKKSNCNRKLIGARYYDSIQRTYSN 172
Query: 210 NKDN----SGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACK 265
NK + S RD GHGTHT S AAG V+N Y LAGGTARGGSP SRIA YKAC
Sbjct: 173 NKTHMAKPDDSPRDFDGHGTHTTSIAAGAKVANVSYHDLAGGTARGGSPSSRIAIYKACT 232
Query: 266 EGGCSGAAILQAIDDAIHDGVDIISISIGLSN-SEADYMNDPIAIGALHAQQRGVVVICS 324
GCSG+ IL+AIDDAI DGVDIISISIG+S+ ++DY+NDPIAIG+ HAQQ ++V+CS
Sbjct: 233 LDGCSGSTILKAIDDAIKDGVDIISISIGMSSLFQSDYLNDPIAIGSFHAQQMNIMVVCS 292
Query: 325 AGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPL 384
GNDGP +T+ N+APW+FTVAAS IDRDFQSTVLLGNGK +G+AIS SN +RS+ YPL
Sbjct: 293 GGNDGPDLYTIVNSAPWIFTVAASNIDRDFQSTVLLGNGKTFQGSAISFSNFNRSRNYPL 352
Query: 385 AYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR---------------KIAVAENVEAQGL 429
A+G+ +A T +S+A C +L G+ K V E+ A+GL
Sbjct: 353 AFGEDVAAKFTPISEARNCYPGSLDTQKVAGKIVVCTDDDLNIPRQIKKLVVEDARAKGL 412
Query: 430 IFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVA 489
I +++DE + P + G P+AEVG ++G +II YIN K PTATILPT +PR+RPAP VA
Sbjct: 413 ILVSEDETVVPFDSGTFPFAEVGNLSGLQIIKYINGTKKPTATILPTRDVPRYRPAPTVA 472
Query: 490 YFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACP 549
YFSSRGPG TENILKPD+ APGVA+LAA++P + G +P G KP YA++SGTSMACP
Sbjct: 473 YFSSRGPGQYTENILKPDIMAPGVAILAAVIPEKE-AGSVPVGNKPTGYAIKSGTSMACP 531
Query: 550 HVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPL 609
HVTGAAAFIKS W+ SMIKSALMTTAT+YDNTG PL NSS + ANPHE+G GEINPL
Sbjct: 532 HVTGAAAFIKSFHHGWSTSMIKSALMTTATIYDNTGKPLQNSSHHFANPHEVGVGEINPL 591
Query: 610 KALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISNINYPSISIS 669
KALNPGLVF+TT +D+L+FLCYYGYS+KNIRSM+ T FNCP+ S +LISNINYPSISIS
Sbjct: 592 KALNPGLVFETTTEDFLQFLCYYGYSEKNIRSMSKTNFNCPRISIDRLISNINYPSISIS 651
Query: 670 KLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFF 729
L R +T+KRTVTNVG PNATYIS V+AP GL VKVFP+K+ F+EG+ ++SFK F+
Sbjct: 652 NLDRHKPAQTIKRTVTNVGCPNATYISRVHAPVGLEVKVFPKKIVFIEGLTRVSFKVLFY 711
Query: 730 GKEASSGYNYGSITWSDDRHSVRMMFAVDV 759
GKEASSGYN+GS+TW D RHSV + FAV+V
Sbjct: 712 GKEASSGYNFGSVTWFDGRHSVLLSFAVNV 741
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546290|ref|XP_003541562.1| PREDICTED: subtilisin-like protease-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/783 (59%), Positives = 584/783 (74%), Gaps = 37/783 (4%)
Query: 7 LLQLLPFLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLS 66
L + L F + L+ + S+ PKPY+VYMG+SS + + G + +IA+ +H+QLLS
Sbjct: 4 LQKFLHFFFVASLLISTTAISDHTPKPYVVYMGNSSPNKI----GVESQIAESSHLQLLS 59
Query: 67 SIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWD 126
IIPSEESER++L HH+ HAF GFSA+LT+SEASALSGHD VVSVFPDPVL+LHTTRSWD
Sbjct: 60 LIIPSEESERIALTHHFSHAFSGFSAMLTESEASALSGHDGVVSVFPDPVLELHTTRSWD 119
Query: 127 FLAA--AAKPAKNTWFNH---KYHKAAS-DIVIGVIDTGIWPESPSFNDQGMGEIPSRWK 180
FL + KP +++H HK S DI+IGVIDTGIWPESPSF D+G+GEIPS+WK
Sbjct: 120 FLESELGMKP----YYSHGTPTLHKHPSTDIIIGVIDTGIWPESPSFRDEGIGEIPSKWK 175
Query: 181 GVCMESPDFKKSHCNRKLIGARHCSRASTNKDNS-------GSSRDPLGHGTHTASTAAG 233
GVCME DFKKS+CNRKLIGAR+ +T+ DN GS RD +GHGTHTAS AAG
Sbjct: 176 GVCMEGRDFKKSNCNRKLIGARYYKIQATSGDNQTHIEAAKGSPRDTVGHGTHTASIAAG 235
Query: 234 NYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISI 293
+V+NA YFGLA GTARGGSP +RIA+YK C + GCSGA IL+AIDDA+ DGVDIISISI
Sbjct: 236 VHVNNASYFGLAKGTARGGSPSTRIAAYKTCSDEGCSGATILKAIDDAVKDGVDIISISI 295
Query: 294 GLSNS-EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDR 352
GLS+ ++D+++DPIAIGA HA+Q+GV+V+CSAGNDGP PFTV N+APW+FT+AAS IDR
Sbjct: 296 GLSSLFQSDFLSDPIAIGAFHAEQKGVLVVCSAGNDGPDPFTVVNSAPWIFTIAASNIDR 355
Query: 353 DFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLY--- 409
+FQST++LGNGK ++GT I+ SNL+ SK + L +G+ +A S+A C +L
Sbjct: 356 NFQSTIVLGNGKYLQGTGINFSNLTHSKMHRLVFGEQVAAKFVPASEARNCFPGSLDFNK 415
Query: 410 ------------PMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGF 457
P +R K V ++ A G+I IN++ K P + G+ P+ +VG + G
Sbjct: 416 TAGNIVVCVNDDPSVSRRIKKLVVQDARAVGIILINENNKDAPFDAGVFPFTQVGNLEGH 475
Query: 458 RIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLA 517
+I+ YINS KNPTATILPT + R +P+P+VA FSSRGP TENILKPDV APGV +LA
Sbjct: 476 QILKYINSTKNPTATILPTTEVARSKPSPIVASFSSRGPSSLTENILKPDVMAPGVGILA 535
Query: 518 AIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577
A++P+ PG +P G+KP+ YA++SGTSMACPHVTGAAAFIKSV +KW+ SMIKSALMTT
Sbjct: 536 AVIPKSKEPGSVPIGKKPSLYAIKSGTSMACPHVTGAAAFIKSVHKKWSSSMIKSALMTT 595
Query: 578 ATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKK 637
AT Y+N PLTNSS + A PHEMG GEINPL+ALNPGLVF+T ++DYLRFLCY+GYS+K
Sbjct: 596 ATNYNNMRKPLTNSSNSIAGPHEMGVGEINPLRALNPGLVFETDVEDYLRFLCYFGYSQK 655
Query: 638 NIRSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISM 697
IRS++ T FNCPK SS LIS++NYPSISIS L RQ + + RTVTNVG NATY +
Sbjct: 656 IIRSISETNFNCPKNSSEDLISSVNYPSISISTLKRQQKAKVITRTVTNVGYLNATYTAK 715
Query: 698 VNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFAV 757
V AP GL V+V P KL F EG+ ++++K SF+GKEA GYN+GS+TW D H V +FAV
Sbjct: 716 VRAPQGLVVEVIPNKLVFSEGVQRMTYKVSFYGKEAHGGYNFGSLTWLDGHHYVHTVFAV 775
Query: 758 DVE 760
VE
Sbjct: 776 KVE 778
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449516513|ref|XP_004165291.1| PREDICTED: subtilisin-like protease-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/737 (60%), Positives = 544/737 (73%), Gaps = 29/737 (3%)
Query: 50 NGEDVEIA--KLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDH 107
NGED + A +L++ QLLSS+IPS S R +IH Y HAFKGFSA+LT+ EAS+LSG D
Sbjct: 3 NGEDEQTAGDELDYFQLLSSVIPSSGS-RAVVIHQYHHAFKGFSAMLTEEEASSLSGIDG 61
Query: 108 VVSVFPDPVLQLHTTRSWDFL-AAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPS 166
+VSVFPDP LQLHTTRSWDFL + + + ++SD+++GVIDTGI+PES S
Sbjct: 62 IVSVFPDPTLQLHTTRSWDFLDSISGLRPPTPLPPPHSYPSSSDVIVGVIDTGIFPESQS 121
Query: 167 FNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNS------GSSRDP 220
FND+G+GEIPS+WKGVCME+PDFKKS+CNRKLIGAR+ + N ++S G+ RD
Sbjct: 122 FNDEGIGEIPSKWKGVCMEAPDFKKSNCNRKLIGARYYNVVELNGNDSHVGPPKGTPRDS 181
Query: 221 LGHGTHTASTAAGNYVSNAIYFGLAGGTARGG-SPFSRIASYKACKEGGCSGAAILQAID 279
GHGTHT+S AAG V NA YFGLA GTARGG SP +RIASYK C GCSGAAIL+AID
Sbjct: 182 HGHGTHTSSIAAGARVPNASYFGLARGTARGGGSPSTRIASYKVCAGVGCSGAAILKAID 241
Query: 280 DAIHDGVDIISISIGLSNS--EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVAN 337
DAI DGVDIISISIG+ + ++DY+NDPIAIGALHAQ GV+V+CSAGNDGP P TV N
Sbjct: 242 DAIKDGVDIISISIGIGSPLFQSDYLNDPIAIGALHAQLMGVLVVCSAGNDGPDPNTVGN 301
Query: 338 TAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLV 397
APW+FTVAAS IDRDFQSTV+LGNGK GTAI+LSNL+ SKTYPL +G+ A T
Sbjct: 302 VAPWIFTVAASNIDRDFQSTVVLGNGKTFPGTAINLSNLTSSKTYPLVFGQDAAAKFTPT 361
Query: 398 SQASQCLYTTLYPMDTRGR---------------KIAVAENVEAQGLIFINDDEKIWPTE 442
S+A C +L G+ K V ++ +A GLI IN+ K P +
Sbjct: 362 SEARNCFPGSLDRSKVAGKIVVCASDDFSTSRIIKELVVQDAKAMGLILINEASKSVPMD 421
Query: 443 RGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTEN 502
I P+ ++G G +I+ YINS KNPTATIL TV + R +PAP VAYFSSRGP TEN
Sbjct: 422 SNIFPFTQIGNSEGLQILEYINSTKNPTATILKTVEVRRLKPAPTVAYFSSRGPSPLTEN 481
Query: 503 ILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVR 562
ILKPD+ APGV++LAA++P+ D G P G+KP+ YA++SGTSMACPHV GAAAFIKSV
Sbjct: 482 ILKPDITAPGVSILAAMIPKSDEDTG-PIGKKPSNYAMKSGTSMACPHVAGAAAFIKSVY 540
Query: 563 RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTI 622
W+ SMIKSALMTTAT YDN + N++ N +NPHEMGAGEI+P+KALNPGLVF+TT
Sbjct: 541 HDWSSSMIKSALMTTATQYDNQRKYMRNTTDNPSNPHEMGAGEISPIKALNPGLVFETTN 600
Query: 623 KDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKR 682
+D+L FLCYYGYS K IRSM F CPK S LISN+NYPSISI+KL R+ A + V+R
Sbjct: 601 EDHLLFLCYYGYSNKVIRSMLKQNFTCPKTSKEDLISNVNYPSISIAKLDRKQAAKVVER 660
Query: 683 TVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSI 742
TVTNVG+P+ATYI+ V++ GL VKV P+K+ F E + K++FK SF+GKEA +GYN+GSI
Sbjct: 661 TVTNVGAPDATYIAKVHSSEGLIVKVNPRKIVFSEKVKKVTFKVSFYGKEARNGYNFGSI 720
Query: 743 TWSDDRHSVRMMFAVDV 759
TW D HSVR FAV+V
Sbjct: 721 TWRDTAHSVRTFFAVNV 737
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449458133|ref|XP_004146802.1| PREDICTED: subtilisin-like protease-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/720 (60%), Positives = 528/720 (73%), Gaps = 26/720 (3%)
Query: 65 LSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRS 124
+ S+ E R +IH Y HAFKGFSA+LT+ EAS+LSG D +VSVFPDP LQLHTTRS
Sbjct: 14 IRSLKEKESGSRAVVIHQYHHAFKGFSAMLTEEEASSLSGIDGIVSVFPDPTLQLHTTRS 73
Query: 125 WDFL-AAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVC 183
WDFL + + + ++SD+++GVIDTGI+PES SFND+G+GEIPS+WKGVC
Sbjct: 74 WDFLDSISGLRPPTPLPPPHSYPSSSDVIVGVIDTGIFPESQSFNDEGIGEIPSKWKGVC 133
Query: 184 MESPDFKKSHCNRKLIGARHCSRASTNKDNS------GSSRDPLGHGTHTASTAAGNYVS 237
ME+PDFKKS+CNRKLIGAR+ + N ++S G+ RD GHGTHT+S AAG V
Sbjct: 134 MEAPDFKKSNCNRKLIGARYYNVVELNGNDSHVGPPKGTPRDSHGHGTHTSSIAAGARVP 193
Query: 238 NAIYFGLAGGTARGG-SPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLS 296
NA YFGLA GTARGG SP +RIASYK C GCSGAAIL+AIDDAI DGVDIISISIG+
Sbjct: 194 NASYFGLARGTARGGGSPSTRIASYKVCAGVGCSGAAILKAIDDAIKDGVDIISISIGIG 253
Query: 297 NS--EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDF 354
+ ++DY+NDPIAIGALHAQ GV+V+CSAGNDGP P TV N APW+FTVAAS IDRDF
Sbjct: 254 SPLFQSDYLNDPIAIGALHAQLMGVLVVCSAGNDGPDPNTVGNVAPWIFTVAASNIDRDF 313
Query: 355 QSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTR 414
QSTV+LGNGK GTAI+LSNL+ SKTYPL +G+ A T S+A C +L
Sbjct: 314 QSTVVLGNGKTFPGTAINLSNLTSSKTYPLVFGQDAAAKFTPTSEARNCFPGSLDRSKVA 373
Query: 415 GR---------------KIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRI 459
G+ K V ++ +A GLI IN+ K P + I P+ ++G G +I
Sbjct: 374 GKIVVCASDDFSTSRIIKELVVQDAKAMGLILINEASKSVPMDSNIFPFTQIGNSEGLQI 433
Query: 460 INYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAI 519
+ YINS KNPTATIL TV + R +PAP VAYFSSRGP TENILKPD+ APGV++LAA+
Sbjct: 434 LEYINSTKNPTATILKTVEVRRLKPAPTVAYFSSRGPSPLTENILKPDITAPGVSILAAM 493
Query: 520 VPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
+P+ D G P G+KP+ YA++SGTSMACPHV GAAAFIKSV W+ SMIKSALMTTAT
Sbjct: 494 IPKSDEDTG-PIGKKPSNYAMKSGTSMACPHVAGAAAFIKSVYHDWSSSMIKSALMTTAT 552
Query: 580 VYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNI 639
YDN + N++ N +NPHEMGAGEI+P+KALNPGLVF+TT +D+L FLCYYGYS K I
Sbjct: 553 QYDNQRKYMRNTTDNPSNPHEMGAGEISPIKALNPGLVFETTNEDHLLFLCYYGYSNKVI 612
Query: 640 RSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVN 699
RSM F CPK S LISN+NYPSISI+KL R+ A + V+RTVTNVG+P+ATYI+ V+
Sbjct: 613 RSMLKQNFTCPKTSKEDLISNVNYPSISIAKLDRKQAAKVVERTVTNVGAPDATYIAKVH 672
Query: 700 APSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFAVDV 759
+ GL VKV P+K+ F E + K++FK SF+GKEA +GYN+GSITW D HSVR FAV+V
Sbjct: 673 SSEGLIVKVNPRKIVFSEKVKKVTFKVSFYGKEARNGYNFGSITWRDTAHSVRTFFAVNV 732
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242057023|ref|XP_002457657.1| hypothetical protein SORBIDRAFT_03g011300 [Sorghum bicolor] gi|241929632|gb|EES02777.1| hypothetical protein SORBIDRAFT_03g011300 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/787 (51%), Positives = 532/787 (67%), Gaps = 46/787 (5%)
Query: 13 FLCLHWLIFVASTSSNEIP-----KPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSS 67
FL L + + V S++ P + Y+VYMGS S + + H+Q+LSS
Sbjct: 9 FLVLAYRLLVPLLSASAEPDHTTKQSYVVYMGSPSGGVNGGGVSDPEAAVQAAHLQMLSS 68
Query: 68 IIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDF 127
I+PS+E R +L Y HAF+GF+A LT+ EA+ALSGH+ VVSVF D LQLHTTRSWDF
Sbjct: 69 IVPSDEQGRAALTQSYHHAFEGFAAALTEKEAAALSGHERVVSVFKDRALQLHTTRSWDF 128
Query: 128 LAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESP 187
L + +A+ D++IG++DTG+WPESPSFND GM ++P+RW+GVCME P
Sbjct: 129 LEVQS----GLQSGRLGRRASGDVIIGIVDTGVWPESPSFNDAGMRDVPARWRGVCMEGP 184
Query: 188 DFKKSHCNRKLIGARH------------CSRASTNKDNSGSSRDPLGHGTHTASTAAGNY 235
DFKKS+CN+KLIGAR+ S A +GS RD +GHGTHTASTAAG
Sbjct: 185 DFKKSNCNKKLIGARYYGVQPESSAPNASSSAMATPAATGSPRDTVGHGTHTASTAAGAV 244
Query: 236 VSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGL 295
VS+A Y+GLA G A+GG+P SR+A Y+AC GGCS +A+L+AIDDA+ DGVD+ISISIG+
Sbjct: 245 VSDADYYGLARGAAKGGAPSSRVAVYRACSLGGCSTSAVLKAIDDAVGDGVDVISISIGM 304
Query: 296 SNS-EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDF 354
S+ ++D++ DPIA+GALHA QRGV+V+CS GNDGP P+TV N+APW+ TVAAS+IDR F
Sbjct: 305 SSVFQSDFLTDPIALGALHAHQRGVLVVCSGGNDGPNPYTVVNSAPWILTVAASSIDRSF 364
Query: 355 QSTVLLGNGKAIKGTAISLSNLSRS-KTYPLAYGKAIAVNSTLVSQASQCLYTTL----- 408
QST+ LGNG +KG AI+ SN S S + +PL +G +A + V++AS C +L
Sbjct: 365 QSTIALGNGDVVKGVAINFSNHSLSGEKFPLVFGAEVAAHYAPVAEASNCYPGSLDAQKV 424
Query: 409 ----------YPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFR 458
PM +R K VAE A+GL+ I+D EK P G ++VG AG +
Sbjct: 425 AGKIVVCVSTDPMVSRRVKKLVAEGSGARGLVLIDDAEKDVPFVAGGFALSQVGTDAGAQ 484
Query: 459 IINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAA 518
I+ YINS KNPTA ILPT + +PAPVVA FS+RGPGL TE+ILKPD+ APGV++LAA
Sbjct: 485 ILEYINSTKNPTAVILPTEEVGDFKPAPVVASFSARGPGL-TESILKPDLMAPGVSILAA 543
Query: 519 IVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTA 578
+P D +P G+KP+ YA++SGTSMACPHV GAAAF+KS WT SMI+SALMTTA
Sbjct: 544 TIPSTDTE-DVPPGKKPSAYAIKSGTSMACPHVAGAAAFVKSAHPGWTPSMIRSALMTTA 602
Query: 579 TVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKN 638
T +N G PL +S+G A H+MGAGE++PL+AL+PGLVF TT +DYL FLCYYGY +++
Sbjct: 603 TTTNNLGKPLASSTGAAATGHDMGAGEMSPLRALSPGLVFDTTAQDYLSFLCYYGYKEQH 662
Query: 639 IRSMT-NTTFNCPKKS-SAKLI-SNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYI 695
+R ++ + F+CP + S LI S +NYPSIS+ +L R V RT NVG NATY
Sbjct: 663 VRKISGDARFSCPAGAPSPDLIASAVNYPSISVPRLQRGKPAAVVARTAMNVGPSNATYA 722
Query: 696 SMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASF---FGKEASSGYNYGSITWSDDRHSVR 752
+ V+AP+GLAV+V P +L F ++ SF G S GY +G++TWSD HSVR
Sbjct: 723 ATVDAPAGLAVRVSPDRLVFSRRWTTAWYEVSFDVAAGAGVSKGYVHGAVTWSDGAHSVR 782
Query: 753 MMFAVDV 759
FAV+V
Sbjct: 783 TPFAVNV 789
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414877062|tpg|DAA54193.1| TPA: putative subtilase family protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/789 (51%), Positives = 531/789 (67%), Gaps = 49/789 (6%)
Query: 6 MLLQLLPFLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLL 65
++ +L + L L+ ++ + + Y+VYMGS S G D E + H+Q+L
Sbjct: 7 FVVLVLAYRLLVPLLSGSAEPDHTTKESYVVYMGSPS-------GGGDPEAVQAAHLQML 59
Query: 66 SSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSW 125
SSI+PS+E R++L H Y HAF+GF+A LTD EA+ALSGH+ VVSVF D LQLHTTRSW
Sbjct: 60 SSIVPSDEQGRVALTHSYHHAFEGFAAALTDKEAAALSGHERVVSVFKDRALQLHTTRSW 119
Query: 126 DFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCME 185
DFL + +A+ D+++G++DTG+WPESPSFND GM ++P+RW+GVCME
Sbjct: 120 DFLEVQS----GLQSGRLGRRASGDVIMGIVDTGVWPESPSFNDAGMRDVPARWRGVCME 175
Query: 186 SPDFKKSHCNRKLIGARH------------CSRASTNKDNSGSSRDPLGHGTHTASTAAG 233
PDFKKS+CN+KLIGAR S A +GS RD +GHGTHTASTAAG
Sbjct: 176 GPDFKKSNCNKKLIGARFYGVQPESSASNASSSAVATPAATGSPRDTVGHGTHTASTAAG 235
Query: 234 NYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISI 293
VS+A Y+GLA G A+GG+P SR+A Y+AC GGCS +A+L+AIDDA+ DGVD+ISISI
Sbjct: 236 AVVSDADYYGLARGAAKGGAPSSRVAVYRACSLGGCSASAVLKAIDDAVGDGVDVISISI 295
Query: 294 GLSNS-EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDR 352
G+S+ ++D++ DPIA+GALHA QRGV+V+CS GNDGP P+TV N+APW+ TVAAS+IDR
Sbjct: 296 GMSSVFQSDFLTDPIALGALHAHQRGVLVVCSGGNDGPNPYTVVNSAPWILTVAASSIDR 355
Query: 353 DFQSTVLLGNGKAIKGTAISLSNLSRS-KTYPLAYGKAIAVNSTLVSQASQCLYTTLY-- 409
FQST+ LGNG +KG AI+ SN S S + YPL +G +A + V++AS C +L
Sbjct: 356 SFQSTIALGNGDVVKGVAINFSNHSLSGEQYPLVFGAQVAAHYAPVAEASNCYPGSLDAQ 415
Query: 410 -------------PMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAG 456
PM +R K VAE A+GL+ I+D EK P G ++VG AG
Sbjct: 416 KVAGKIVVCVSTDPMVSRRVKKLVAEGSGARGLVLIDDAEKDVPFVTGGFALSQVGTDAG 475
Query: 457 FRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVL 516
+I+ YINS KNPTA IL T + +PAPVVA FS+RGPGL TE+ILKPD+ APGV++L
Sbjct: 476 AQILEYINSTKNPTAVILQTEDVGDFKPAPVVASFSARGPGL-TESILKPDLMAPGVSIL 534
Query: 517 AAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMT 576
AA +P D +P G+K + YA++SGTSMACPHV GAAAF+KS WT SMI+SALMT
Sbjct: 535 AATIPSTDSED-VPPGKKQSAYAIKSGTSMACPHVAGAAAFVKSAHPGWTPSMIRSALMT 593
Query: 577 TATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSK 636
TAT +N G PL +S+G A H+MGAGE++PL+AL+PGLVF T+ +DYL LCYYGY +
Sbjct: 594 TATTTNNLGKPLASSTGAAATGHDMGAGEMSPLRALSPGLVFDTSTQDYLDLLCYYGYKE 653
Query: 637 KNIRSMTNTT-FNCPKKS-SAKLI-SNINYPSISISKLARQGAIRTVKRTVTNVGSPNAT 693
+ +R ++ F+CP + S LI S +NYPSIS+ +L R G TV RT NVG NAT
Sbjct: 654 QQVRKISGAARFSCPAGAPSPDLIASAVNYPSISVPRLKR-GRPATVARTAMNVGPSNAT 712
Query: 694 YISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASF---FGKEASSGYNYGSITWSDDRHS 750
Y + V+AP GLAV+V P +L F ++ SF S GY +G++TWSD HS
Sbjct: 713 YAATVDAPPGLAVRVSPDRLVFSRRWTTARYEVSFDVAAAAAVSKGYVHGAVTWSDGAHS 772
Query: 751 VRMMFAVDV 759
VR FAV+V
Sbjct: 773 VRTPFAVNV 781
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|125525399|gb|EAY73513.1| hypothetical protein OsI_01395 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/788 (49%), Positives = 522/788 (66%), Gaps = 51/788 (6%)
Query: 13 FLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSE 72
+ ++ L+ S ++ + Y+VYMG + ++ E A+ HM++L+S+ P+
Sbjct: 10 LVLVYRLLVPLSAEPDQTRESYVVYMGGGGGAGAGVEE----EAARAMHMEMLTSVAPAG 65
Query: 73 ESE---RLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLA 129
+ + +L Y HAF+GF+A LT++EA+ALSGH+ VVSVF D L+LHTTRSWDFL
Sbjct: 66 DDQGRAAAALTQSYHHAFQGFAAELTEAEAAALSGHERVVSVFRDRALELHTTRSWDFLD 125
Query: 130 AAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDF 189
+ + +A+ D++IG++DTG+WPES SF+D GMG +P+RW+GVCME PDF
Sbjct: 126 VQS----GLRSDRLGRRASGDVIIGIVDTGVWPESASFSDAGMGPVPARWRGVCMEGPDF 181
Query: 190 KKSHCNRKLIGARHCSRASTNKD----------NSGSSRDPLGHGTHTASTAAGNYVSNA 239
KKS CN+KLIGAR+ S + GS RD +GHGTHTASTAAG V A
Sbjct: 182 KKSSCNKKLIGARYYSSQPGSASSSSAAGAVTATGGSPRDAVGHGTHTASTAAGAVVPGA 241
Query: 240 IYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNS- 298
Y+GLA G A+GG+P SR+A YKAC GGC+ +A+L+AIDDA+ DGVD++SISIG+S++
Sbjct: 242 GYYGLARGAAKGGAPASRVAVYKACSLGGCASSAVLKAIDDAVGDGVDVVSISIGMSSAF 301
Query: 299 EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTV 358
++D++ DPIA+GA HA QRGV+V+CS GNDGP P+TV N+APW+ TVAAS+IDR F ST+
Sbjct: 302 QSDFLADPIALGAFHAHQRGVLVVCSGGNDGPNPYTVVNSAPWILTVAASSIDRSFHSTI 361
Query: 359 LLGNGKAIKGTAISLSNLS-RSKTYPLAYGKAIAVNSTLVSQASQCLYTTLY-------- 409
+LGNG +KG AI+ SN S YPL +G +A T VS+AS C +L
Sbjct: 362 VLGNGTLVKGIAINFSNQSITGGQYPLVFGPQVAGRYTPVSEASNCYPGSLDAQKAAGKI 421
Query: 410 -------PMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINY 462
PM +R K VAE A GL+ I+D EK P G P+++V AG +I+ Y
Sbjct: 422 VVCVGTDPMVSRRVKKLVAEGAGASGLVLIDDAEKAVPFVAGGFPFSQVATDAGAQILEY 481
Query: 463 INSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPR 522
INS KNPTA ILPT +PAPVVA FS+RGPG TE ILKPD+ APGV++LAA +P
Sbjct: 482 INSTKNPTAVILPTEDAKDDKPAPVVASFSARGPGGLTEAILKPDLMAPGVSILAATIPT 541
Query: 523 PDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYD 582
D+ +PAG+ P+ +A++SGTSMACPHV GAAAF+KS W+ SMI+SALMTTAT +
Sbjct: 542 ADKED-VPAGKNPSPFAIKSGTSMACPHVAGAAAFVKSAHPGWSPSMIRSALMTTATTRN 600
Query: 583 NTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSM 642
N G + +S+G A H+MGAGEI+PL+AL+PGLVF TT +DYL FLCYYGY ++ +R +
Sbjct: 601 NLGQAVASSTGAAATGHDMGAGEISPLRALSPGLVFDTTTRDYLNFLCYYGYKEQLVRKL 660
Query: 643 -----TNTTFNCPKKS-SAKLI-SNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYI 695
F CP+ + S LI S +NYPSIS+ +L G TV R NVG PNATY
Sbjct: 661 AGAGAAGAAFACPRGAPSPDLIASGVNYPSISVPRL-LAGRTATVSRVAMNVGPPNATYA 719
Query: 696 SMVNAPSGLAVKVFPQKLTF----VEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSV 751
+ V AP GLAVKV P++L F ++SF+ + G AS GY +G++TWSD HSV
Sbjct: 720 AAVEAPPGLAVKVSPERLVFSSRWTTAAYQVSFEIAGAGAGASKGYVHGAVTWSDGAHSV 779
Query: 752 RMMFAVDV 759
R FAV+V
Sbjct: 780 RTPFAVNV 787
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 760 | ||||||
| TAIR|locus:2198656 | 769 | ATSBT5.2 "AT1G20160" [Arabidop | 0.930 | 0.919 | 0.432 | 6e-151 | |
| TAIR|locus:2198606 | 780 | AT1G20150 "AT1G20150" [Arabido | 0.882 | 0.860 | 0.405 | 1.3e-132 | |
| UNIPROTKB|Q0J050 | 769 | Os09g0530800 "Os09g0530800 pro | 0.930 | 0.919 | 0.407 | 4.5e-130 | |
| UNIPROTKB|Q7XTY8 | 776 | OSJNBa0019K04.9 "Os04g0573300 | 0.865 | 0.847 | 0.422 | 7.6e-128 | |
| TAIR|locus:2153291 | 736 | SBT4.12 "AT5G59090" [Arabidops | 0.842 | 0.869 | 0.421 | 1.2e-127 | |
| TAIR|locus:2050215 | 772 | AIR3 "AT2G04160" [Arabidopsis | 0.931 | 0.917 | 0.388 | 1.8e-126 | |
| TAIR|locus:2136824 | 746 | UNE17 "AT4G26330" [Arabidopsis | 0.776 | 0.790 | 0.387 | 4e-123 | |
| TAIR|locus:2091010 | 775 | AT3G14240 "AT3G14240" [Arabido | 0.439 | 0.430 | 0.468 | 8.2e-123 | |
| TAIR|locus:2154528 | 713 | AT5G58840 "AT5G58840" [Arabido | 0.376 | 0.401 | 0.521 | 1.9e-121 | |
| TAIR|locus:2168434 | 732 | SBT4.13 "AT5G59120" [Arabidops | 0.840 | 0.872 | 0.411 | 2.2e-121 |
| TAIR|locus:2198656 ATSBT5.2 "AT1G20160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 324/749 (43%), Positives = 434/749 (57%)
Query: 34 YIVYMGSSSRSNLIIQNGEDVEIAKLNHMQXXXXXXXXXXXXXXXXXHHYKHAFKGFSAI 93
YIVYMGS+S + N +I +N M H YKH F GF+A
Sbjct: 36 YIVYMGSASSA----ANANRAQIL-INTM---------FKRRANDLLHTYKHGFSGFAAR 81
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVI 153
LT EA ++ VVSVFPDP QLHTT SWDFL ++ + D ++
Sbjct: 82 LTAEEAKVIAKKPGVVSVFPDPHFQLHTTHSWDFLKYQTSVKVDSGPPSSASDGSYDSIV 141
Query: 154 GVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDN 213
G++DTGIWPES SFND+ MG IPSRWKG CME+ DFK S+CNRK+IGAR+ + +
Sbjct: 142 GILDTGIWPESESFNDKDMGPIPSRWKGTCMEAKDFKSSNCNRKIIGARYYKNPDDDSEY 201
Query: 214 SGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAA 273
++RD +GHG+H +ST AG+ V NA Y+G+A GTA+GGS +RIA YK C GGC+G++
Sbjct: 202 Y-TTRDVIGHGSHVSSTIAGSAVENASYYGVASGTAKGGSQNARIAMYKVCNPGGCTGSS 260
Query: 274 ILQAIDDAIHDGVDIISISIGL-SNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP 332
IL A DDAI DGVD++S+S+G + + D DPIAIGA HA ++G++VICSAGNDGP
Sbjct: 261 ILAAFDDAIADGVDVLSLSLGAPAYARIDLNTDPIAIGAFHAVEQGILVICSAGNDGPDG 320
Query: 333 FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAV 392
TV NTAPW+ TVAA+TIDRDF+S V+LG K IKG I SN+S+S YPL +GK+
Sbjct: 321 GTVTNTAPWIMTVAANTIDRDFESDVVLGGNKVIKGEGIHFSNVSKSPVYPLIHGKSAKS 380
Query: 393 NSTLVSQASQCLYTTLYPMDTRGRKIAVAENV-----------EAQ-----GLIFINDDE 436
A C +L +G KI + ENV E + G +F++D
Sbjct: 381 ADASEGSARACDSDSLDQEKVKG-KIVLCENVGGSYYASSARDEVKSKGGTGCVFVDDRT 439
Query: 437 KIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGP 496
+ + G P + I +Y+NS K+P ATILPT T+ + PAP VAYFSSRGP
Sbjct: 440 RAVASAYGSFPTTVIDSKEAAEIFSYLNSTKDPVATILPTATVEKFTPAPAVAYFSSRGP 499
Query: 497 GLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT-YALRSGTSMACPHVTGAA 555
T +ILKPD+ APGV++LAA I KPA+ Y + SGTSMA PHV+ A
Sbjct: 500 SSLTRSILKPDITAPGVSILAAWT---GNDSSISLEGKPASQYNVISGTSMAAPHVSAVA 556
Query: 556 AFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPG 615
+ IKS W S I+SA+MTTAT +N +T +G A P++ GAGE++ ++ PG
Sbjct: 557 SLIKSQHPTWGPSAIRSAIMTTATQTNNDKGLITTETGATATPYDSGAGELSSTASMQPG 616
Query: 616 LVFKTTIKDYLRFLCYYGYSKKNIRSMTNT---TFNCPKKSSAKLXXXXXXXXXXXXKLA 672
LV++TT DYL FLCYYGY+ I++M+ F CP S+ L
Sbjct: 617 LVYETTETDYLNFLCYYGYNVTTIKAMSKAFPENFTCPADSNLDLISTINYPSIGISGFK 676
Query: 673 RQGAIRTVKRTVTNVGSPN-ATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGK 731
G+ +TV RTVTNVG A Y V P G ++V P+KL F + KL+++
Sbjct: 677 GNGS-KTVTRTVTNVGEDGEAVYTVSVETPPGFNIQVTPEKLQFTKDGEKLTYQVIVSAT 735
Query: 732 EASSGYNYGSITWSDDRHSVRMMFAVDVE 760
+ +G++TWS+ ++ VR + E
Sbjct: 736 ASLKQDVFGALTWSNAKYKVRSPIVISSE 764
|
|
| TAIR|locus:2198606 AT1G20150 "AT1G20150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1300 (462.7 bits), Expect = 1.3e-132, P = 1.3e-132
Identities = 288/710 (40%), Positives = 417/710 (58%)
Query: 81 HHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWF 140
H YKH F GF+A L++ EA ++ V+SVFPD +LQLHTTRSWDFL + ++T+F
Sbjct: 67 HRYKHGFSGFAAHLSEDEAHLIAKQPGVLSVFPDQMLQLHTTRSWDFLVQESYQ-RDTYF 125
Query: 141 NHKYHKAAS-----DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKS--H 193
++ S D +IG +D+GIWPE+ SFND+ MG +P +WKG CM +
Sbjct: 126 TEMNYEQESEMHEGDTIIGFLDSGIWPEAQSFNDRHMGPVPEKWKGTCMRGKKTQPDSFR 185
Query: 194 CNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGS 253
CNRKLIGAR+ + + + + RD LGHGTH AS AAG ++NA Y+GLA G RGGS
Sbjct: 186 CNRKLIGARYYNSSFFLDPDYETPRDFLGHGTHVASIAAGQIIANASYYGLASGIMRGGS 245
Query: 254 PFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALH 313
P SRIA Y+AC GC G++IL A DDAI DGVD+ISIS+GL + + DP++IG+ H
Sbjct: 246 PSSRIAMYRACSLLGCRGSSILAAFDDAIADGVDVISISMGLWPD--NLLEDPLSIGSFH 303
Query: 314 AQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGN--GKAIKGTAI 371
A +RG+ V+CS GN GP +V N APW+ TVAASTIDR F+S +LLG + I+G I
Sbjct: 304 AVERGITVVCSVGNSGPSSQSVFNAAPWMITVAASTIDRGFESNILLGGDENRLIEGFGI 363
Query: 372 SLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIF 431
+++N+ +++ YPL + ++ A C TL +G+ + +++ Q + +
Sbjct: 364 NIANIDKTQAYPLIHARSAKKIDANEEAARNCAPDTLDQTIVKGKIVVCDSDLDNQVIQW 423
Query: 432 INDDEK--------IWPTERGILPYAEVGKVA-------GFRIINYINSNKNPTATILPT 476
+D+ K + E L + + + G +I++YINS + P ATI+PT
Sbjct: 424 KSDEVKRLGGIGMVLVDDESMDLSFIDPSFLVTIIKPEDGIQIMSYINSTREPIATIMPT 483
Query: 477 VTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPA 536
+ H AP + FSSRGP L T +ILKPD+AAPGV +LA+ + DR P G+ P
Sbjct: 484 RSRTGHMLAPSIPSFSSRGPYLLTRSILKPDIAAPGVNILASWLVG-DR-NAAPEGKPPP 541
Query: 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNA 596
+ + SGTSM+CPHV+G AA +KS W+ + I+SA+MTTA NTG+ +T +G A
Sbjct: 542 LFNIESGTSMSCPHVSGIAARLKSRYPSWSPAAIRSAIMTTAVQMTNTGSHITTETGEKA 601
Query: 597 NPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTT---FNCPKKS 653
P++ GAG++ +PGL+++T DYL FL YYG++ I+ ++N F CP++S
Sbjct: 602 TPYDFGAGQVTIFGPSSPGLIYETNHMDYLNFLGYYGFTSDQIKKISNRIPQGFACPEQS 661
Query: 654 SAKLXXXXXXXXXXXXKLARQGAIRTVKRTVTNV-----GSPNATYISMVNAPSGLAVKV 708
+ + + R V RTVTNV G + Y ++AP GL V+V
Sbjct: 662 NRGDISNINYPSISISNFNGKES-RRVSRTVTNVASRLIGDEDTVYTVSIDAPEGLLVRV 720
Query: 709 FPQKLTFVEGIIKLSFKASFFGKEASSGYN-YGSITWSDDRHSVRMMFAV 757
P++L F + KLS++ F + +GSITWS+ ++VR F V
Sbjct: 721 IPRRLHFRKIGDKLSYQVIFSSTTTILKDDAFGSITWSNGMYNVRSPFVV 770
|
|
| UNIPROTKB|Q0J050 Os09g0530800 "Os09g0530800 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
Identities = 307/754 (40%), Positives = 414/754 (54%)
Query: 40 SSSRSNL-IIQNGED-----VEIAKLNHMQXXXXXXXXXXXXXXXXXHHYKHAFKGFSAI 93
SSSRSN+ I+ GE E+ + H + Y+H F GF+A+
Sbjct: 20 SSSRSNVYIVYMGERHHGLRPELVQEAHHGMLAAVLGSEQAAMDAILYSYRHGFSGFAAV 79
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVI 153
LT +A+ LS VV V + VL LHTTRSWDF+ P+ + D +I
Sbjct: 80 LTGGQAARLSDWPGVVRVVRNRVLDLHTTRSWDFMGVNPSPSGGGILLES--RFGEDSII 137
Query: 154 GVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSR---ASTN 210
GV+DTGIWPES SF D G+GE+P RWKG C+ F S+CNRK+IGA+ + A
Sbjct: 138 GVLDTGIWPESASFRDDGIGEVPRRWKGQCVAGEKFNASNCNRKIIGAKWYVKGYEAEYG 197
Query: 211 KDNSG------SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC 264
K N+ S+RD +GHGTHTASTAAG V+NA + GLA G ARGG+ +R+A YK C
Sbjct: 198 KMNTSDIYEFMSARDAVGHGTHTASTAAGALVANASFRGLAKGVARGGAQRARLAVYKVC 257
Query: 265 -KEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVIC 323
G C+ A IL A DDAIHDGVD+IS+S+G + Y++D ++IG+ HA +GVVV+C
Sbjct: 258 WATGDCTAADILAAFDDAIHDGVDVISVSLGQAPPLPAYVDDVLSIGSFHAVAKGVVVVC 317
Query: 324 SAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYP 383
SAGN GPY TV N+APW+ TVAA TIDR F + ++LGN G + S SK+
Sbjct: 318 SAGNSGPYSETVINSAPWIVTVAAGTIDRIFLAKIILGNNSTYVGQTL-YSGKHPSKSVR 376
Query: 384 LAYGKAIAVNSTLVSQASQC----LYTTLYP------MDTRGRKIA-VA-ENVEAQ---G 428
+ Y + I+ ++ + A C L TL TR ++ A VA E V+ G
Sbjct: 377 IVYAEDISSDNADDTDARSCTAGSLNATLVKGNVVLCFQTRAQRSASVAVETVKKARGVG 436
Query: 429 LIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVV 488
+IF K + I P +V G I+ Y S +NP A TI AP V
Sbjct: 437 VIFAQFLTKDIASSLDI-PCVQVDYQVGTAILAYTTSMRNPVAQFSFPKTIVGELVAPEV 495
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
AYFSSRGP + +ILKPD+AAPGV +LAA P I + + + SGTSM+C
Sbjct: 496 AYFSSRGPSSLSPSILKPDIAAPGVNILAAWSPA----AAISSAIGSVNFKIDSGTSMSC 551
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSG--NNANPHEMGAGEI 606
PH++G A +KS+ W+ + +KSAL+TTA V+D G + + + N+ANP + G G +
Sbjct: 552 PHISGVVALLKSMHPNWSPAAVKSALVTTANVHDAYGFEMVSEAAPYNDANPFDYGGGHV 611
Query: 607 NPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLXXXXXXXXX 666
NP +A +PGLV+ + DY+RFLC GY+ I SMT C ++L
Sbjct: 612 NPNRAAHPGLVYDMGVSDYMRFLCSMGYNTSAISSMTQQQTTCQHTPKSQLNLNVPSITI 671
Query: 667 XXXKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKA 726
+ G + TV RTVTNVG + Y + V AP G+ V V P LTF + KL FK
Sbjct: 672 PELR----GKL-TVSRTVTNVGPALSKYRARVEAPPGVDVTVSPSLLTFNSTVRKLPFKV 726
Query: 727 SFFGKEASSG-YNYGSITWSDDRHSVRMMFAVDV 759
+F K G Y +GS+TW D H+VR+ V +
Sbjct: 727 TFQAKLKVKGRYTFGSLTWEDGTHTVRIPLVVRI 760
|
|
| UNIPROTKB|Q7XTY8 OSJNBa0019K04.9 "Os04g0573300 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
Identities = 296/701 (42%), Positives = 406/701 (57%)
Query: 81 HHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWF 140
++Y+ AF GF+A L + EA ++ D V++V P+ VLQLHTTRS DFL + + W
Sbjct: 79 YNYETAFHGFAAQLDEEEAELMAEADGVLAVIPETVLQLHTTRSPDFLGIGPEVSNRIWS 138
Query: 141 NHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIG 200
+ A D+V+GV+DTGIWPESPSF+D+G+G +P++WKG+C F ++CNRK++G
Sbjct: 139 DSL---ADHDVVVGVLDTGIWPESPSFSDKGLGPVPAKWKGLCQTGRGFTTANCNRKIVG 195
Query: 201 AR---HCSRASTNKDNSG----SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGS 253
AR + AS+ N S RD GHGTHTA+TAAG+ V +A +G AGG ARG +
Sbjct: 196 ARIFYNGYEASSGPINETTELKSPRDQDGHGTHTAATAAGSPVQDANLYGYAGGVARGMA 255
Query: 254 PFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALH 313
P +R+A+YK C GGC + IL A+D A+ DGVD++SIS+G S Y D ++I +
Sbjct: 256 PRARVAAYKVCWAGGCFSSDILAAVDRAVSDGVDVLSISLGGGASR--YYLDSLSIASFG 313
Query: 314 AQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAI-- 371
A Q GV V CSAGN GP P ++ N +PW+ TV AST+DRDF +TV LGNG I G ++
Sbjct: 314 AMQMGVFVACSAGNAGPDPISLTNLSPWITTVGASTMDRDFPATVTLGNGANITGVSLYK 373
Query: 372 SLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKI----AVAENV--- 424
L NLS + YP+ Y + NS++ S CL TL P D G+ + ++ V
Sbjct: 374 GLRNLSPQEQYPVVY---LGGNSSMPDPRSLCLEGTLQPHDVSGKIVICDRGISPRVQKG 430
Query: 425 ----EAQGLIFI------NDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATIL 474
EA G+ I N +E + + +LP VG+ G +Y S PTAT+
Sbjct: 431 QVVKEAGGIGMILANTAANGEELV--ADSHLLPAVAVGEAEGIAAKSYSKSAPKPTATLS 488
Query: 475 PTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEK 534
T RP+PVVA FSSRGP + T ILKPDV APGV +LAA P + + +
Sbjct: 489 FGGTKLGIRPSPVVAAFSSRGPNILTLEILKPDVVAPGVNILAAWSGDAS-PSSLSSDSR 547
Query: 535 PATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSS-G 593
+ + SGTSM+CPHV G AA IK+ W+ + IKSALMTTA V+DNT P+ +++ G
Sbjct: 548 RVGFNILSGTSMSCPHVAGVAALIKASHPDWSPAQIKSALMTTAYVHDNTYRPMKDAATG 607
Query: 594 NNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMT-NTTFNCPKK 652
+ P E GAG I+P++AL PGLV+ DYL FLC + +R+ T N+ C
Sbjct: 608 KASTPFEHGAGHIHPVRALTPGLVYDIGQADYLEFLCTQHMTPMQLRTFTKNSNMTCRHT 667
Query: 653 -SSAKLXXXXXXXXXXXXKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQ 711
SSA + ++ A+ TV+RTVTNVG P++TY V G V V P
Sbjct: 668 FSSASDLNYPAISVVFADQPSK--AL-TVRRTVTNVGPPSSTYHVKVTKFKGADVIVEPN 724
Query: 712 KLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVR 752
L FV KLS+K + K A +G+++WSD H VR
Sbjct: 725 TLHFVSTNQKLSYKVTVTTKAAQKAPEFGALSWSDGVHIVR 765
|
|
| TAIR|locus:2153291 SBT4.12 "AT5G59090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
Identities = 291/691 (42%), Positives = 405/691 (58%)
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNH 142
YK +F GF+A LT+SE + ++ + VVSVFP+ +LQLHTT SWDF+ K KNT N
Sbjct: 73 YKRSFNGFAARLTESERTLIAEIEGVVSVFPNKILQLHTTTSWDFMGV--KEGKNTKRNL 130
Query: 143 KYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR 202
SD +IGVIDTGIWPES SF+D+G G P +WKGVC +F CN KLIGAR
Sbjct: 131 AIE---SDTIIGVIDTGIWPESKSFSDKGFGPPPKKWKGVCSGGKNFT---CNNKLIGAR 184
Query: 203 HCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK 262
+ T RD GHGTHTASTAAGN V + +FG+ GT RGG P SRIA+YK
Sbjct: 185 DYTSEGT--------RDTSGHGTHTASTAAGNAVKDTSFFGIGNGTVRGGVPASRIAAYK 236
Query: 263 ACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVI 322
C + GCS A+L + DDAI DGVD+I+ISIG + +DPIAIGA HA +G++ +
Sbjct: 237 VCTDSGCSSEALLSSFDDAIADGVDLITISIGFQFPSI-FEDDPIAIGAFHAMAKGILTV 295
Query: 323 CSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTY 382
SAGN GP P TV++ APW+FTVAAST +R F + V+LGNGK + G +++ ++ + K Y
Sbjct: 296 SSAGNSGPKPTTVSHVAPWIFTVAASTTNRGFITKVVLGNGKTLAGRSVNAFDM-KGKKY 354
Query: 383 PLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIA--------VAENVEAQGLIFIND 434
PL YGK+ A ++ A+ C L +G+ + +A++V A +I +
Sbjct: 355 PLVYGKSAASSACDAKTAALCAPACLNKSRVKGKILVCGGPSGYKIAKSVGAIAIIDKSP 414
Query: 435 DEKIWPTERGILPYAEVGKVAGFR-IINYINSNKNPTATILPTVTIPRHRPAPVVAYFSS 493
+ T LP + + K F+ +++YI S +P A +L T TI +R +PV+A FSS
Sbjct: 415 RPDVAFTHH--LPASGL-KAKDFKSLVSYIESQDSPQAAVLKTETI-FNRTSPVIASFSS 470
Query: 494 RGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE--KPATYALRSGTSMACPHV 551
RGP +ILKPD+ APGV +LAA P G P+ + + Y++ SGTSMACPHV
Sbjct: 471 RGPNTIAVDILKPDITAPGVEILAAF-----SPNGEPSEDDTRRVKYSVFSGTSMACPHV 525
Query: 552 TGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKA 611
G AA++K+ +W+ SMI+SA+MTTA G + ++ GAG ++P+ A
Sbjct: 526 AGVAAYVKTFYPRWSPSMIQSAIMTTAWPVKAKGRGIASTE------FAYGAGHVDPMAA 579
Query: 612 LNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLXXXXXXXXXXXXKL 671
LNPGLV++ D++ FLC Y+ K ++ ++ T C KK+ K+ KL
Sbjct: 580 LNPGLVYELDKADHIAFLCGMNYTSKTLKIISGDTVKCSKKN--KILPRNLNYPSMSAKL 637
Query: 672 ARQGAIRTV--KRTVTNVGSPNATYISMVNAPSG--LAVKVFPQKLTFVEGIIKLSFKAS 727
+ + +V RT+TNVG+PN+TY S V A G L++KV P L F K SF +
Sbjct: 638 SGTDSTFSVTFNRTLTNVGTPNSTYKSKVVAGHGSKLSIKVTPSVLYFKTVNEKQSFSVT 697
Query: 728 FFGKEASSGY-NYGSITWSDDRHSVRMMFAV 757
G + S + ++ WSD H+VR V
Sbjct: 698 VTGSDVDSEVPSSANLIWSDGTHNVRSPIVV 728
|
|
| TAIR|locus:2050215 AIR3 "AT2G04160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 293/755 (38%), Positives = 401/755 (53%)
Query: 34 YIVYMGSSSRSNLIIQNGEDVEIAKLNHMQXXXXXXXXXXXXXXXXXHHYKHAFKGFSAI 93
Y+VY G+ S I ++ D K H + Y GF+A
Sbjct: 32 YVVYFGAHSHVGEITEDAMDR--VKETHYDFLGSFTGSRERATDAIFYSYTKHINGFAAH 89
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAK---PAKNTWFNHKYHKAASD 150
L A +S H VVSVFP+ L+LHTTRSWDFL P+ + W ++ D
Sbjct: 90 LDHDLAYEISKHPEVVSVFPNKALKLHTTRSWDFLGLEHNSYVPSSSIWRKARF---GED 146
Query: 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSR---A 207
+I +DTG+WPES SF D+G+G IPSRWKG+C D HCNRKLIGAR+ ++ A
Sbjct: 147 TIIANLDTGVWPESKSFRDEGLGPIPSRWKGICQNQKD-ATFHCNRKLIGARYFNKGYAA 205
Query: 208 STNKDNSG--SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC- 264
+ NS S RD GHG+HT STAAG++V FG GTA+GGSP +R+A+YK C
Sbjct: 206 AVGHLNSSFDSPRDLDGHGSHTLSTAAGDFVPGVSIFGQGNGTAKGGSPRARVAAYKVCW 265
Query: 265 ---KEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVV 321
K C A +L A D AIHDG D+IS+S+G + ND +AIG+ HA ++ +VV
Sbjct: 266 PPVKGNECYDADVLAAFDAAIHDGADVISVSLG--GEPTSFFNDSVAIGSFHAAKKRIVV 323
Query: 322 ICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKT 381
+CSAGN GP TV+N APW TV AST+DR+F S ++LGNGK KG ++S + L +K
Sbjct: 324 VCSAGNSGPADSTVSNVAPWQITVGASTMDREFASNLVLGNGKHYKGQSLSSTALPHAKF 383
Query: 382 YPL-AYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVA---EN--VEAQGLIFINDD 435
YP+ A A A N++ + A C +L P+ T+G KI V +N VE + +
Sbjct: 384 YPIMASVNAKAKNASALD-AQLCKLGSLDPIKTKG-KILVCLRGQNGRVEKGRAVALGGG 441
Query: 436 -----EKIWPT------ERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRP 484
E + T + +LP ++ F + YI+ K P A I P+ T +P
Sbjct: 442 IGMVLENTYVTGNDLLADPHVLPATQLTSKDSFAVSRYISQTKKPIAHITPSRTDLGLKP 501
Query: 485 APVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGT 544
APV+A FSS+GP + ILKPD+ APGV+V+AA P + + SGT
Sbjct: 502 APVMASFSSKGPSIVAPQILKPDITAPGVSVIAAYTGAVS-PTNEQFDPRRLLFNAISGT 560
Query: 545 SMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAG 604
SM+CPH++G A +K+ W+ + I+SA+MTTAT+ D+ P+ N++ A P GAG
Sbjct: 561 SMSCPHISGIAGLLKTRYPSWSPAAIRSAIMTTATIMDDIPGPIQNATNMKATPFSFGAG 620
Query: 605 EINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLXXXXXXX 664
+ P A+NPGLV+ IKDYL FLC GY+ I + F C SS K+
Sbjct: 621 HVQPNLAVNPGLVYDLGIKDYLNFLCSLGYNASQISVFSGNNFTC---SSPKISLVNLNY 677
Query: 665 XXXXXKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSF 724
+ TV RTV NVG P+ Y VN P G+ V V P L F + + +F
Sbjct: 678 PSITVPNLTSSKV-TVSRTVKNVGRPSM-YTVKVNNPQGVYVAVKPTSLNFTKVGEQKTF 735
Query: 725 KASFFGKEAS--SGYNYGSITWSDDRHSVRMMFAV 757
K + + GY +G + WSD +H VR V
Sbjct: 736 KVILVKSKGNVAKGYVFGELVWSDKKHRVRSPIVV 770
|
|
| TAIR|locus:2136824 UNE17 "AT4G26330" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 983 (351.1 bits), Expect = 4.0e-123, Sum P(2) = 4.0e-123
Identities = 241/622 (38%), Positives = 330/622 (53%)
Query: 159 GIWPESPSFNDQGMGE-IPSRWKGVCMESPDFKKS-HCNRKLIGARHCSRAS-------- 208
GIWPES SF + + IPS W G C+ DF S HCNRKLIGAR R
Sbjct: 113 GIWPESESFRETPEAKPIPSSWNGKCVGGEDFDPSVHCNRKLIGARFYLRGFEETYGTID 172
Query: 209 -TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAI-YFGLAGGTARGGSPFSRIASYKAC-- 264
T S RD LGHGTHTASTA G+ V N +FGL GTARGG+P +R+A +K C
Sbjct: 173 FTRDPEYRSPRDYLGHGTHTASTAVGSVVRNVSGFFGLGRGTARGGAPLARLAVFKTCWG 232
Query: 265 K--EGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVI 322
K EG C+ A IL A DDAIHDGV +IS S G S + + IGA HA +RG+ V+
Sbjct: 233 KDLEGVCTEADILAAFDDAIHDGVHVISASFGYSPPLSPFFESSADIGAFHAAERGISVV 292
Query: 323 CSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTY 382
S GNDGP P V N APW +VAAST+DR F + +++ + G ++ ++ +
Sbjct: 293 FSTGNDGPDPGVVQNVAPWAVSVAASTVDRSFPTRIVIDGSFTLTGQSLISQEITGTLAL 352
Query: 383 PLAY--GKAIAVNSTLVSQASQCL---YTTLYPMDTRGRKIAVAENVEAQGLIFINDDEK 437
Y G + + A++ + ++TL P+ A A A LIF +
Sbjct: 353 ATTYFNGGVCKWENWMKKLANETIILCFSTLGPVQFIEEAQAAAIRANALALIFAASPTR 412
Query: 438 IWPTERGILPYAEVGKVAGFRIINYI-NSNKNPTATILPTVTIPRHRPAPVVAYFSSRGP 496
E ++P V + G RI NY+ S P I P+ T+ AP VAYFSSRGP
Sbjct: 413 QLAEEVDMIPTVRVDILHGTRIRNYLARSPTVPMVKIGPSKTVIGETTAPSVAYFSSRGP 472
Query: 497 GLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAA 556
+ +ILKPD+ APG+ +LAA PR P +P + + +SGTSM+CPHV G A
Sbjct: 473 SSLSPDILKPDITAPGIGILAAWPPRTP-PTLLPGDHRSIEWNFQSGTSMSCPHVAGVMA 531
Query: 557 FIKSVRRKWTYSMIKSALMTTATVYDNT-GTPLTNSSGNNANPHEMGAGEINPLKALNPG 615
++S W+ S I+SA+MTTA D + L+ S + +P ++GAG INPLKA++PG
Sbjct: 532 LLQSAHPDWSPSAIRSAIMTTAYTRDTSYDLILSGGSMKSTDPFDIGAGHINPLKAMDPG 591
Query: 616 LVFKTTIKDYLRFLCYYGYSKKNIRSMT---NTTFNCPKKSSAKLXXXXXXXXXXXXKLA 672
LV+ T DY+ F+C GY+ + I+SM + C S + L
Sbjct: 592 LVYNTRTDDYVLFMCNIGYTDQEIKSMVLHPEPSTTCLPSHSYRTNADFNYPSITIPSLR 651
Query: 673 RQGAIRTVKRTVTNVG-SPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGK 731
RT+KRTV+NVG + N Y + P G+ V ++P+ L F + + S+ +F
Sbjct: 652 ---LTRTIKRTVSNVGPNKNTVYFVDIIRPVGVEVLIWPRILVFSKCQQEHSYYVTFKPT 708
Query: 732 EASSG-YNYGSITWSDDRHSVR 752
E SG Y +G I W++ H VR
Sbjct: 709 EIFSGRYVFGEIMWTNGLHRVR 730
|
|
| TAIR|locus:2091010 AT3G14240 "AT3G14240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 725 (260.3 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 164/350 (46%), Positives = 203/350 (58%)
Query: 81 HHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWF 140
H Y F GFSA LT +AS L H HV+SV P+ V LHTTRS +FL +
Sbjct: 64 HTYDTVFHGFSARLTSQDASQLLDHPHVISVIPEQVRHLHTTRSPEFLGLRSTDKAGLLE 123
Query: 141 NHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIG 200
+ SD+VIGVIDTG+WPE PSF+D+G+G +P +WKG C+ S DF +S CNRKL+G
Sbjct: 124 ESDF---GSDLVIGVIDTGVWPERPSFDDRGLGPVPIKWKGQCIASQDFPESACNRKLVG 180
Query: 201 ARH-CS--RASTNKDNSG----SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGS 253
AR C A+ K N S RD GHGTHTAS +AG YV A G A G A G +
Sbjct: 181 ARFFCGGYEATNGKMNETTEFRSPRDSDGHGTHTASISAGRYVFPASTLGYAHGVAAGMA 240
Query: 254 PFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALH 313
P +R+A+YK C GC + IL A D A+ DGVD+IS+S+G Y D IAIGA
Sbjct: 241 PKARLAAYKVCWNSGCYDSDILAAFDTAVADGVDVISLSVG--GVVVPYYLDAIAIGAFG 298
Query: 314 AQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAI-S 372
A RG+ V SAGN GP TV N APW+ TV A TIDRDF + V LGNGK I G ++
Sbjct: 299 AIDRGIFVSASAGNGGPGALTVTNVAPWMTTVGAGTIDRDFPANVKLGNGKMISGVSVYG 358
Query: 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAE 422
L + YPL YG ++ S S CL +L P +G KI + +
Sbjct: 359 GPGLDPGRMYPLVYGGSLLGGDGYSS--SLCLEGSLDPNLVKG-KIVLCD 405
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| TAIR|locus:2154528 AT5G58840 "AT5G58840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 738 (264.8 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 159/305 (52%), Positives = 199/305 (65%)
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNH 142
YK +F GF+A LT+SE ++ + VVSVFPD +L TT SWDFL K KNT N
Sbjct: 76 YKRSFNGFAARLTESERERVAEMEGVVSVFPDINYKLQTTASWDFLGL--KEGKNTKRNL 133
Query: 143 KYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR 202
SD +IG ID+GIWPES SF+D+G G P +WKGVC +F CN KLIGAR
Sbjct: 134 AIE---SDTIIGFIDSGIWPESESFSDKGFGPPPKKWKGVCSAGKNFT---CNNKLIGAR 187
Query: 203 HCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK 262
+ N G+ RD GHGTHTASTAAGN V N ++G+ GTARGG P SRIA+YK
Sbjct: 188 DYT-------NEGT-RDIEGHGTHTASTAAGNAVKNTSFYGIGNGTARGGVPASRIAAYK 239
Query: 263 ACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVI 322
AC E GC+ ++L A DDAI DGVD+ISIS+G +N Y DPIAIGA HA +G++ +
Sbjct: 240 ACSEMGCTTESVLSAFDDAIADGVDLISISLG-ANLVRTYETDPIAIGAFHAMVKGILTV 298
Query: 323 CSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTY 382
SAGN GP P +V + APW+ TVAAS +R F + V+LGNGK G +++ +L + K Y
Sbjct: 299 QSAGNGGPNPGSVMSVAPWILTVAASNTNRGFVTKVVLGNGKTFVGKSLNAFDL-KGKNY 357
Query: 383 PLAYG 387
PL YG
Sbjct: 358 PL-YG 361
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| TAIR|locus:2168434 SBT4.13 "AT5G59120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 285/692 (41%), Positives = 393/692 (56%)
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNH 142
YK +F GF+A LT+SE ++ VVSVFP+ LQL TT SWDF+ K T N
Sbjct: 72 YKRSFNGFAARLTESERERVAKMVGVVSVFPNKKLQLQTTTSWDFMGL--KEGIKTKRNP 129
Query: 143 KYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR 202
SD +IGVID+GI PES SF+D+G G P +WKGVC +F CN KLIGAR
Sbjct: 130 TVE---SDTIIGVIDSGITPESQSFSDKGFGPPPQKWKGVCSGGKNFT---CNNKLIGAR 183
Query: 203 HCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK 262
+ T RD GHGTHTASTAAGN V +A +FG+ GT RGG P SR+A+YK
Sbjct: 184 DYTSEGT--------RDMDGHGTHTASTAAGNAVVDASFFGIGNGTVRGGVPASRVAAYK 235
Query: 263 ACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVI 322
C GCS A+L A DDAI DGVD+I+ISIG + + + NDPIAIGA HA +GV+ +
Sbjct: 236 VCTPTGCSSEALLSAFDDAIADGVDLITISIG-DKTASMFQNDPIAIGAFHAMAKGVLTV 294
Query: 323 CSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTY 382
SAGN GP P +V+ APW+ TVAAST +R F + V+LGNGK + G +++ + + K Y
Sbjct: 295 NSAGNSGPKPISVSGVAPWILTVAASTTNRGFVTKVVLGNGKTLVGKSVNAYEM-KGKDY 353
Query: 383 PLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIA--------VAENVEAQGLIFIND 434
PL YGK+ A ++ A C + + +G+ + + E+V A GLI+
Sbjct: 354 PLVYGKSAASSACDAESAGLCELSCVDKSRVKGKILVCGGPGGLKIVESVGAVGLIYRTP 413
Query: 435 DEKIWPTERGILPYAEVGKVA-GFR-IINYINSNKNPTATILPTVTIPRHRPAPVVAYFS 492
P I P G + F +++Y+ S +P A +L T I +R +PV+A FS
Sbjct: 414 K----PDVAFIHPLPAAGLLTEDFESLVSYLESTDSPQAIVLKTEAI-FNRTSPVIASFS 468
Query: 493 SRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE--KPATYALRSGTSMACPH 550
SRGP +ILKPD+ APGV +LAA P G P+ + + Y++ SGTSM+CPH
Sbjct: 469 SRGPNTIAVDILKPDITAPGVEILAAY-----SPAGEPSQDDTRHVKYSVLSGTSMSCPH 523
Query: 551 VTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLK 610
V G AA++K+ KW+ SMI+SA+MTTA + TGT + ++ G+G ++P+
Sbjct: 524 VAGVAAYVKTFNPKWSPSMIQSAIMTTAWPVNATGTGIASTE------FAYGSGHVDPIA 577
Query: 611 ALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLXXXXXXXXXXXXK 670
A NPGLV++ D++ FLC Y+ + ++ ++ T C + + K+ K
Sbjct: 578 ASNPGLVYELDKSDHIAFLCGMNYTSQVLKVISGETVTCSE--AKKILPRNLNYPSMSAK 635
Query: 671 LARQGAIRTV--KRTVTNVGSPNATYISMVNAPSG--LAVKVFPQKLTFVEGIIKLSFKA 726
L+ G TV RT+TNVG+PN+TY S V A G L VK+ P L+F K SF
Sbjct: 636 LSGSGTTFTVTFNRTLTNVGTPNSTYTSKVVAGHGSKLDVKITPSVLSFKTVNEKQSFTV 695
Query: 727 SFFGKEASSGY-NYGSITWSDDRHSVRMMFAV 757
+ G S + ++ WSD H+VR V
Sbjct: 696 TVTGSNLDSEVPSSANLIWSDGTHNVRSPIVV 727
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.21 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.III.2712.1 | hypothetical protein (741 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 760 | |||
| cd04852 | 307 | cd04852, Peptidases_S8_3, Peptidase S8 family doma | 1e-109 | |
| cd04852 | 307 | cd04852, Peptidases_S8_3, Peptidase S8 family doma | 2e-24 | |
| cd07474 | 295 | cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid | 3e-24 | |
| cd07474 | 295 | cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid | 1e-23 | |
| cd00306 | 241 | cd00306, Peptidases_S8_S53, Peptidase domain in th | 2e-19 | |
| cd07487 | 264 | cd07487, Peptidases_S8_1, Peptidase S8 family doma | 2e-19 | |
| cd07487 | 264 | cd07487, Peptidases_S8_1, Peptidase S8 family doma | 2e-18 | |
| pfam05922 | 76 | pfam05922, Inhibitor_I9, Peptidase inhibitor I9 | 5e-16 | |
| cd07477 | 229 | cd07477, Peptidases_S8_Subtilisin_subset, Peptidas | 2e-15 | |
| cd07475 | 346 | cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 | 3e-14 | |
| cd07481 | 264 | cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep | 4e-14 | |
| cd07489 | 312 | cd07489, Peptidases_S8_5, Peptidase S8 family doma | 3e-13 | |
| cd02120 | 126 | cd02120, PA_subtilisin_like, PA_subtilisin_like: P | 4e-13 | |
| cd07490 | 254 | cd07490, Peptidases_S8_6, Peptidase S8 family doma | 8e-13 | |
| cd07475 | 346 | cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 | 2e-12 | |
| cd07490 | 254 | cd07490, Peptidases_S8_6, Peptidase S8 family doma | 2e-12 | |
| pfam00082 | 277 | pfam00082, Peptidase_S8, Subtilase family | 2e-12 | |
| pfam00082 | 277 | pfam00082, Peptidase_S8, Subtilase family | 2e-12 | |
| cd07473 | 259 | cd07473, Peptidases_S8_Subtilisin_like, Peptidase | 3e-12 | |
| cd07478 | 455 | cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam | 5e-12 | |
| cd07482 | 294 | cd07482, Peptidases_S8_Lantibiotic_specific_protea | 1e-11 | |
| cd07484 | 260 | cd07484, Peptidases_S8_Thermitase_like, Peptidase | 7e-11 | |
| cd07489 | 312 | cd07489, Peptidases_S8_5, Peptidase S8 family doma | 2e-10 | |
| cd07477 | 229 | cd07477, Peptidases_S8_Subtilisin_subset, Peptidas | 3e-10 | |
| cd04848 | 267 | cd04848, Peptidases_S8_Autotransporter_serine_prot | 4e-10 | |
| cd04842 | 293 | cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 | 4e-10 | |
| cd00306 | 241 | cd00306, Peptidases_S8_S53, Peptidase domain in th | 7e-10 | |
| cd07485 | 273 | cd07485, Peptidases_S8_Fervidolysin_like, Peptidas | 5e-09 | |
| cd07478 | 455 | cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam | 3e-08 | |
| cd04077 | 255 | cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep | 4e-08 | |
| cd04077 | 255 | cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep | 5e-08 | |
| cd07473 | 259 | cd07473, Peptidases_S8_Subtilisin_like, Peptidase | 6e-08 | |
| cd07496 | 285 | cd07496, Peptidases_S8_13, Peptidase S8 family dom | 9e-08 | |
| cd07484 | 260 | cd07484, Peptidases_S8_Thermitase_like, Peptidase | 1e-07 | |
| cd07480 | 297 | cd07480, Peptidases_S8_12, Peptidase S8 family dom | 2e-07 | |
| cd07480 | 297 | cd07480, Peptidases_S8_12, Peptidase S8 family dom | 2e-07 | |
| COG1404 | 508 | COG1404, AprE, Subtilisin-like serine proteases [P | 1e-06 | |
| cd07481 | 264 | cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep | 3e-06 | |
| cd04857 | 412 | cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_ | 4e-06 | |
| cd07493 | 261 | cd07493, Peptidases_S8_9, Peptidase S8 family doma | 1e-05 | |
| cd07493 | 261 | cd07493, Peptidases_S8_9, Peptidase S8 family doma | 2e-05 | |
| cd07479 | 255 | cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 fa | 3e-05 | |
| TIGR03921 | 350 | TIGR03921, T7SS_mycosin, type VII secretion-associ | 8e-05 | |
| cd05561 | 239 | cd05561, Peptidases_S8_4, Peptidase S8 family doma | 1e-04 | |
| cd04848 | 267 | cd04848, Peptidases_S8_Autotransporter_serine_prot | 2e-04 | |
| COG1404 | 508 | COG1404, AprE, Subtilisin-like serine proteases [P | 2e-04 | |
| cd07476 | 267 | cd07476, Peptidases_S8_thiazoline_oxidase_subtilis | 2e-04 | |
| cd07483 | 291 | cd07483, Peptidases_S8_Subtilisin_Novo-like, Pepti | 2e-04 | |
| cd04857 | 412 | cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_ | 3e-04 | |
| cd07497 | 311 | cd07497, Peptidases_S8_14, Peptidase S8 family dom | 4e-04 | |
| cd07497 | 311 | cd07497, Peptidases_S8_14, Peptidase S8 family dom | 4e-04 | |
| cd07498 | 242 | cd07498, Peptidases_S8_15, Peptidase S8 family dom | 7e-04 | |
| TIGR03921 | 350 | TIGR03921, T7SS_mycosin, type VII secretion-associ | 8e-04 | |
| cd04842 | 293 | cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 | 0.001 | |
| cd04847 | 291 | cd04847, Peptidases_S8_Subtilisin_like_2, Peptidas | 0.001 | |
| cd05561 | 239 | cd05561, Peptidases_S8_4, Peptidase S8 family doma | 0.002 | |
| cd05562 | 275 | cd05562, Peptidases_S53_like, Peptidase domain in | 0.002 | |
| cd05562 | 275 | cd05562, Peptidases_S53_like, Peptidase domain in | 0.002 |
| >gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
Score = 334 bits (859), Expect = e-109
Identities = 127/241 (52%), Positives = 142/241 (58%), Gaps = 12/241 (4%)
Query: 117 LQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIP 176
QLHTTRS DFL A A I+IGV+DTGIWPE PSF D G G P
Sbjct: 1 YQLHTTRSPDFLGLP--GAWGGSLLGA-ANAGEGIIIGVLDTGIWPEHPSFADVGGGPYP 57
Query: 177 SRWKGVCMESPDFKKSHCNRKLIGARHCSRA--STNKDNSG----SSRDPLGHGTHTAST 230
W G C+ DF CN KLIGAR+ S + NS S RD GHGTHTAST
Sbjct: 58 HTWPGDCVTGEDFNPFSCNNKLIGARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTAST 117
Query: 231 AAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEGGCSGAAILQAIDDAIHDGVDII 289
AAGN V NA G A GTA G +P +RIA YK C +GGC G+ IL AID AI DGVD+I
Sbjct: 118 AAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAIADGVDVI 177
Query: 290 SISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAAST 349
S SIG + D DPIAI LHA + G+ V SAGN GP TV N APW+ TVAAST
Sbjct: 178 SYSIGGGSP--DPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAAST 235
Query: 350 I 350
+
Sbjct: 236 L 236
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307 |
| >gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 504 LKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRR 563
LKPD+AAPGV +LAA P G P + +A SGTSMA PHV G AA +KS
Sbjct: 236 LKPDIAAPGVDILAAWTP----EGADPGDARGEDFAFISGTSMASPHVAGVAALLKSAHP 291
Query: 564 KWTYSMIKSALMTTAT 579
W+ + IKSALMTTA
Sbjct: 292 DWSPAAIKSALMTTAY 307
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307 |
| >gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+ + VIDTGI P G G + KG DF + + +
Sbjct: 2 KGVKVAVIDTGIDYTHPDL--GGPGFPNDKVKG----GYDF---------VDDDYDPMDT 46
Query: 209 TNKD---NSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACK 265
S+ D GHGTH A AGN V+ G+A P + + +YK
Sbjct: 47 RPYPSPLGDASAGDATGHGTHVAGIIAGNGVNVGTIKGVA--------PKADLYAYKVLG 98
Query: 266 EGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICS 324
GG + I+ AI+ A+ DG+D+I++S+G S + +DP AI +A + GVVV+ +
Sbjct: 99 PGGSGTTDVIIAAIEQAVDDGMDVINLSLG---SSVNGPDDPDAIAINNAVKAGVVVVAA 155
Query: 325 AGNDGPYPFTVAN--TAPWLFTVAASTIDRDFQS 356
AGN GP P+T+ + TAP TV AST+ ++
Sbjct: 156 AGNSGPAPYTIGSPATAPSAITVGASTVADVAEA 189
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The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 295 |
| >gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 52/136 (38%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
Query: 477 VTIPRHRPAPVVAYFSSRGPGLPTEN-ILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKP 535
T+ A V SSRGP PT + +KPD+ APGV +++ P G
Sbjct: 181 STVADVAEADTVGPSSSRGP--PTSDSAIKPDIVAPGVDIMSTA---PGSGTG------- 228
Query: 536 ATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNN 595
YA SGTSMA PHV GAAA +K W+ + IK+ALM NT PL +S G
Sbjct: 229 --YARMSGTSMAAPHVAGAAALLKQAHPDWSPAQIKAALM-------NTAKPLYDSDGVV 279
Query: 596 ANPHEMGAGEINPLKA 611
GAG ++ L+A
Sbjct: 280 YPVSRQGAGRVDALRA 295
|
The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 295 |
| >gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
Score = 88.0 bits (218), Expect = 2e-19
Identities = 52/207 (25%), Positives = 79/207 (38%), Gaps = 45/207 (21%)
Query: 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTN 210
+ + VIDTG+ P+ P + G D N
Sbjct: 1 VTVAVIDTGVDPDHPDLDG---------LFGGGDGGNDD------------------DDN 33
Query: 211 KDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEGGC 269
++ D GHGTH A A + G G +P +++ K +G
Sbjct: 34 ENGPTDPDDGNGHGTHVAGIIAASAN---------NGGGVGVAPGAKLIPVKVLDGDGSG 84
Query: 270 SGAAILQAIDDAIHD-GVDIISISIGLSNSEAD-YMNDPIAIGALHAQQRGVVVICSAGN 327
S + I AID A D G D+I++S+G S +++ AI + GV+V+ +AGN
Sbjct: 85 SSSDIAAAIDYAAADQGADVINLSLGGPGSPPSSALSE--AIDYA-LAKLGVLVVAAAGN 141
Query: 328 DGPYPFTVAN---TAPWLFTVAASTID 351
DGP T +P + V A D
Sbjct: 142 DGPDGGTNIGYPAASPNVIAVGAVDRD 168
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Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 241 |
| >gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 2e-19
Identities = 50/209 (23%), Positives = 79/209 (37%), Gaps = 47/209 (22%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
I + V+DTGI P F+ + + DF
Sbjct: 2 KGITVAVLDTGIDAPHPDFDGRIIRFA------------DFV------------------ 31
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGN-YVSNAIYFGLAGGTARGGSPFSRIASYKAC-KE 266
+ + D GHGTH A AG+ SN Y G+A P + + K
Sbjct: 32 NTVNGRTTPYDDNGHGTHVAGIIAGSGRASNGKYKGVA--------PGANLVGVKVLDDS 83
Query: 267 GGCSGAAILQAIDDAI----HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVI 322
G S + I+ ID + + ++++S+G + Y DP+ G+VV+
Sbjct: 84 GSGSESDIIAGIDWVVENNEKYNIRVVNLSLGAPPDPS-YGEDPLCQAVERLWDAGIVVV 142
Query: 323 CSAGNDGPYPFTVAN--TAPWLFTVAAST 349
+AGN GP P T+ + +P + TV A
Sbjct: 143 VAAGNSGPGPGTITSPGNSPKVITVGAVD 171
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 264 |
| >gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 2e-18
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
++YFSSRGP + +KPDV APG +++ P + G+ +G Y SGTSMA
Sbjct: 180 ISYFSSRGPTG--DGRIKPDVVAPGENIVSCRSPGGNPGAGVGSG-----YFEMSGTSMA 232
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
PHV+GA A + T +K L TAT
Sbjct: 233 TPHVSGAIALLLQANPILTPDEVKCILRDTAT 264
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 264 |
| >gnl|CDD|203351 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 5e-16
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 34 YIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAI 93
YIV +G +H +S + ++ YKH F GF+A
Sbjct: 2 YIVKFK----------DGVSKAAVFSSHKSWHASSKEEAAGASI--LYSYKHGFNGFAAK 49
Query: 94 LTDSEASALSGHDHVVSVFPDPVLQLH 120
LT+ EA L H V V PD V++LH
Sbjct: 50 LTEEEAEKLRKHPDVEYVEPDQVVELH 76
|
This family includes the proteinase B inhibitor from Saccharomyces cerevisiae and the activation peptides from peptidases of the subtilisin family. The subtilisin propeptides are known to function as molecular chaperones, assisting in the folding of the mature peptidase, but have also been shown to act as 'temporary inhibitors'. Length = 76 |
| >gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 2e-15
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
Query: 487 VVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSM 546
A FSS GP + ++AAPGV +L+ P YA SGTSM
Sbjct: 161 NRASFSSTGPEV--------ELAAPGVDILSTY------PNN--------DYAYLSGTSM 198
Query: 547 ACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577
A PHV G AA + S R + T + ++ AL T
Sbjct: 199 ATPHVAGVAALVWSKRPELTNAQVRQALNKT 229
|
This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 229 |
| >gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 3e-14
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 33/140 (23%)
Query: 484 PAPVVAYFSSRGPGLPTENI-LKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRS 542
++ FSS GP T ++ LKPD+ APG + + + TY S
Sbjct: 230 NGGQMSGFSSWGP---TPDLDLKPDITAPGGNIYSTV------NDN--------TYGYMS 272
Query: 543 GTSMACPHVTGAAAFIKS-VRRKWT-------YSMIKSALMTTAT-VYDNTGTPLTNSSG 593
GTSMA PHV GA+A +K ++ K+ ++K+ LM TAT D+ T S
Sbjct: 273 GTSMASPHVAGASALVKQRLKEKYPKLSGEELVDLVKNLLMNTATPPLDSEDTKTYYS-- 330
Query: 594 NNANPHEMGAGEINPLKALN 613
P GAG I+ KA+
Sbjct: 331 ----PRRQGAGLIDVAKAIA 346
|
Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 346 |
| >gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 4e-14
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 16/76 (21%)
Query: 487 VVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSM 546
V+A FSSRGP T +KPD++APGV + +A+ PGG Y SGTSM
Sbjct: 186 VLADFSSRGPS--TYGRIKPDISAPGVNIRSAV------PGG--------GYGSSSGTSM 229
Query: 547 ACPHVTGAAAFIKSVR 562
A PHV G AA + S
Sbjct: 230 AAPHVAGVAALLWSAN 245
|
Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Length = 264 |
| >gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 23/133 (17%)
Query: 485 APVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGT 544
A V +YFSS GP E LKPDVAAPG +L+ P GG YA+ SGT
Sbjct: 185 ASVDSYFSSWGPTN--ELYLKPDVAAPGGNILSTY---PLAGGG---------YAVLSGT 230
Query: 545 SMACPHVTGAAAFIKSVRR-KWTYSMIKSALMTTAT---VYDNTGTPLTNSSGNNANPHE 600
SMA P+V GAAA + R K + + ++ L +TA D T + A +
Sbjct: 231 SMATPYVAGAAALLIQARHGKLSPAELRDLLASTAKPLPWSDGTSALP-----DLAPVAQ 285
Query: 601 MGAGEINPLKALN 613
GAG +N KAL
Sbjct: 286 QGAGLVNAYKALY 298
|
gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 312 |
| >gnl|CDD|239035 cd02120, PA_subtilisin_like, PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-13
Identities = 47/135 (34%), Positives = 61/135 (45%), Gaps = 27/135 (20%)
Query: 357 TVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR 416
V LGNGK I G ++ NL KTYPL Y ++ AS CL +L P +G
Sbjct: 1 VVTLGNGKTIVGQSLYPGNL---KTYPLVY----KSANSGDVDASLCLPGSLDPSKVKG- 52
Query: 417 KI------------AVAENVEAQ---GLIFIND---DEKIWPTERGILPYAEVGKVAGFR 458
KI A + V+A G+I ND + + +LP V G
Sbjct: 53 KIVLCDRGGNTSRVAKGDAVKAAGGAGMILANDPTDGLDV-VADAHVLPAVHVDYEDGTA 111
Query: 459 IINYINSNKNPTATI 473
I++YINS NPTATI
Sbjct: 112 ILSYINSTSNPTATI 126
|
This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, members of the tomato P69 family, and tomato LeSBT2. These proteins belong to the peptidase S8 family. Cucumisin from the juice of melon fruits is a thermostable serine peptidase, with a broad substrate specificity for oligopeptides and proteins. A. thaliana Ara12 is a thermostable, extracellular serine protease, found chiefly in silique tissue and stem tissue. Ara12 is stimulated by Ca2+ ions. A. glutinosa ag12 is expressed at high levels in the nodules, and at low levels in the shoot tips; it is implicated in both symbiotic and non-symbiotic processes in plant development. The tomato P69 protease family is comprised of various protein isoforms of approximately 69KDa. These isoforms accumulate extracellularly. Some of the P69 genes are tightly regulated in a tissue specific fashion, and by environmental and developmental signals. For example: infection with avirulent bacteria activates transcription of the genes for the P69 B and C isoforms, the P69 E transcript was detected only in roots, and the P69F transcript only in hydathodes. The Tomato LeSBT2 subtilase transcript was not detected in flowers and roots, but was present in cotyledons and leaves. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Length = 126 |
| >gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 8e-13
Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
A S P + KPDVAAPGV V +A R G G+ Y SGTSMA
Sbjct: 175 ASLVSAPDSPP-DEYTKPDVAAPGVDVYSA------RQGANGDGQ----YTRLSGTSMAA 223
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTA 578
PHV G AA + + + IK AL TA
Sbjct: 224 PHVAGVAALLAAAHPDLSPEQIKDALTETA 253
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 254 |
| >gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 2e-12
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 25/238 (10%)
Query: 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSH-----CNRKLIGARHCSR 206
V+ VID+G+ P +F + +++ E+ K N K+ A +
Sbjct: 14 VVAVIDSGVDPTHDAFR--LDDDSKAKYSEE-FEAKKKKAGIGYGKYYNEKVPFAYN--- 67
Query: 207 ASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK---A 263
+ N D+ D HG H A AGN G+ +G +P +++ + K
Sbjct: 68 YADNNDDILDEDDGSSHGMHVAGIVAGNGDEEDNGEGI-----KGVAPEAQLLAMKVFSN 122
Query: 264 CKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVIC 323
+ G A +AI+DA+ G D+I++S+G + ++DP A++ GVVV+
Sbjct: 123 PEGGSTYDDAYAKAIEDAVKLGADVINMSLGSTAG-FVDLDDPEQQAIKRAREAGVVVVV 181
Query: 324 SAGNDG----PYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLS 377
+AGNDG +A P TV + D TV N K +S S
Sbjct: 182 AAGNDGNSGSGTSKPLATNNPDTGTVGSPATADDV-LTVASANKKVPNPNGGQMSGFS 238
|
Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 346 |
| >gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 2e-12
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 222 GHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDA 281
GHGTH + T G G A G G +P + + K +GG S + I+ ++ A
Sbjct: 44 GHGTHVSGTIGG---------GGAKGVYIGVAPEADLLHGKVLDDGGGSLSQIIAGMEWA 94
Query: 282 IHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPW 341
+ D++S+S+G + D + + A+ AL Q G + + SAGN+G +A
Sbjct: 95 VEKDADVVSMSLGGTYYSEDPLEE--AVEALSNQT-GALFVVSAGNEGHGTSGSPGSAYA 151
Query: 342 LFTVAASTIDRD 353
+V A +DRD
Sbjct: 152 ALSVGA--VDRD 161
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 254 |
| >gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 42/210 (20%)
Query: 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNK 211
+GV+DTGI P D + N
Sbjct: 1 TVGVLDTGIDVNHP----------------------DLSGRYIGLAYRNGYD---FVDND 35
Query: 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSG 271
+ D GHGTH A A + + G+A P +++ S K G +
Sbjct: 36 PDPTPDDDNNGHGTHVAGIIAAGDNNGSGGVGVA--------PNAKLESVKVLPGSGGTD 87
Query: 272 AAILQAIDDAI--HDGVDIISISIGLSNSEADYMNDPIAIGALH-AQQRGVVVICSAGND 328
+ + AI+ A + + +I++S+G + + I A++ A +G + + +AGN
Sbjct: 88 SELAGAIEWAAERPNDIRVINMSLGPVDGPPSSWSSAIDELAVNGADNKGSLFVVAAGNG 147
Query: 329 GPYPFTVANTAP-----WLFTVAASTIDRD 353
G Y + P + TV A T +
Sbjct: 148 GDYADNNPVSDPASANNII-TVGAVTENGT 176
|
Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567. Length = 277 |
| >gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 25/126 (19%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+A FS+ G + + +KPD+ APG +L++ P G+ + SGTSMA
Sbjct: 177 IADFSNYGGPV---DGIKPDIVAPGGNILSSG----------PGGDLGGYDSH-SGTSMA 222
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
P V GAAA + S T +++ L+TTAT S G + G G +N
Sbjct: 223 APLVAGAAALLLSANPSLTPETLRALLVTTAT--------DLGSMGLD---RSFGYGLLN 271
Query: 608 PLKALN 613
KA+
Sbjct: 272 LGKAVK 277
|
Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567. Length = 277 |
| >gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 3e-12
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 14/73 (19%)
Query: 507 DVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWT 566
D+AAPGV +L+ PGG Y SGTSMA PHV GAAA + S+ T
Sbjct: 201 DLAAPGVDILSTS------PGG--------GYGYMSGTSMATPHVAGAAALLLSLNPNLT 246
Query: 567 YSMIKSALMTTAT 579
+ IK A++++A
Sbjct: 247 AAQIKDAILSSAD 259
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 259 |
| >gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 5e-12
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 16/71 (22%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+A FS RGP + +KPD+AAPGV +L A PGG Y RSGTS+A
Sbjct: 359 IAIFSGRGP--TRDGRIKPDIAAPGVNILTAS------PGG--------GYTTRSGTSVA 402
Query: 548 CPHVTGAAAFI 558
V GA A +
Sbjct: 403 AAIVAGACALL 413
|
GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 455 |
| >gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 1e-11
Identities = 49/193 (25%), Positives = 73/193 (37%), Gaps = 52/193 (26%)
Query: 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTN 210
+ + VID+GI P+ P S P G
Sbjct: 2 VTVAVIDSGIDPDHP-------DLKNSISSYSKNLVPKG----------GYD-----GKE 39
Query: 211 KDNSGSSR---DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK-ACKE 266
+G D LGHGT A A N G +G +P I SY+
Sbjct: 40 AGETGDINDIVDKLGHGTAVAGQIAAN------------GNIKGVAPGIGIVSYRVFGSC 87
Query: 267 GGCSGAAILQAIDDAIHDGVDIISISIG--------LSNSEADY--MNDPIAIGALHAQQ 316
G + I++AI DA DGVD+I++S+G + + +Y I +A+
Sbjct: 88 GSAESSWIIKAIIDAADDGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAIN----YAKS 143
Query: 317 RGVVVICSAGNDG 329
+G +V+ +AGNDG
Sbjct: 144 KGSIVVAAAGNDG 156
|
Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 294 |
| >gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 7e-11
Identities = 54/209 (25%), Positives = 77/209 (36%), Gaps = 54/209 (25%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S + + V+DTG+ P P G DF
Sbjct: 28 SGVTVAVVDTGVDPTHPDLLKV------KFVLGY-----DFV------------------ 58
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKE-G 267
DN + D GHGTH A A +N G+AG +P ++I K G
Sbjct: 59 ---DNDSDAMDDNGHGTHVAGIIAAA--TNNGT-GVAGV-----APKAKIMPVKVLDANG 107
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
S A I I A G +I++S+G + + + I +A +GVVV+ +AGN
Sbjct: 108 SGSLADIANGIRYAADKGAKVINLSLG-GGLGSTALQEAIN----YAWNKGVVVVAAAGN 162
Query: 328 DG----PYPFTVANTAPWLFTVAASTIDR 352
+G YP P VAA+ D
Sbjct: 163 EGVSSVSYP----AAYPGAIAVAATDQDD 187
|
Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 260 |
| >gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 22/118 (18%)
Query: 219 DPL---GHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAA-- 273
DP+ GHGTH A A N NA F G +P + + +Y+ GCSG+
Sbjct: 63 DPMDCQGHGTHVAGIIAAN--PNAYGF-------TGVAPEATLGAYRVF---GCSGSTTE 110
Query: 274 --ILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDG 329
I+ A A DG D+I+ S+G + ++ DP A+ A GVVV +AGNDG
Sbjct: 111 DTIIAAFLRAYEDGADVITASLGGPSGWSE---DPWAVVASRIVDAGVVVTIAAGNDG 165
|
gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 312 |
| >gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
Score = 61.0 bits (149), Expect = 3e-10
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 47/182 (25%)
Query: 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAST 209
+ + VIDTGI P +G G T
Sbjct: 1 GVKVAVIDTGIDSSHPDLKLNIVG-------GANF------------------------T 29
Query: 210 NKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGC 269
DN+ D GHGTH A A + N + G G +P + + + K + G
Sbjct: 30 GDDNNDYQ-DGNGHGTHVAGIIAA--LDNGV-----GVV--GVAPEADLYAVKVLNDDGS 79
Query: 270 SGA-AILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGND 328
I+ I+ AI +G+DII++S+G S++ + + I A G++V+ +AGN
Sbjct: 80 GTYSDIIAGIEWAIENGMDIINMSLG-GPSDSPALREAIKK----AYAAGILVVAAAGNS 134
Query: 329 GP 330
G
Sbjct: 135 GN 136
|
This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 229 |
| >gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 47/208 (22%), Positives = 65/208 (31%), Gaps = 51/208 (24%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+ + +GVID+GI P F G + V +
Sbjct: 3 AGVKVGVIDSGIDLSHPEFA----GRVSEASYYV-------------------------A 33
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
N S+ D HGTH A A G A P + + S +A G
Sbjct: 34 VNDAGYASNGDGDSHGTHVAGVIAAARDGGG-----MHGVA----PDATLYSARASASAG 84
Query: 269 CSG--AAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGA----------LHAQQ 316
+ A I A D GV II+ S G + + A A
Sbjct: 85 STFSDADIAAAYDFLAASGVRIINNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAAN 144
Query: 317 RGVVVICSAGNDGPY-PFTVANTAPWLF 343
G + + +AGNDG P A P+L
Sbjct: 145 AGGLFVFAAGNDGQANPSLAAAALPYLE 172
|
Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface. Length = 267 |
| >gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT-YALRSGTSM 546
VA FSSRGP + +KPD+ APG +L+A R GG G+ + Y +SGTSM
Sbjct: 201 VASFSSRGPT--YDGRIKPDLVAPGTGILSA------RSGGGGIGDTSDSAYTSKSGTSM 252
Query: 547 ACPHVTGAAAFI-KSVRRKW-------TYSMIKSALMTTA 578
A P V GAAA + + + + +++K+ L+ +A
Sbjct: 253 ATPLVAGAAALLRQYFVDGYYPTKFNPSAALLKALLINSA 292
|
Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases. Length = 293 |
| >gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 7e-10
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 20/89 (22%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
+ S+ G D+AAPG +L++ YA SGTSMA
Sbjct: 173 SPSSNGGA--------GVDIAAPGGDILSSPTTGGG------------GYATLSGTSMAA 212
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTT 577
P V G AA + S T + +K+AL++T
Sbjct: 213 PIVAGVAALLLSANPDLTPAQVKAALLST 241
|
Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 241 |
| >gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 5e-09
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
A FS+ G + D+AAPGV + + VP+ D GG Y SGTSMA
Sbjct: 198 KASFSNYGRWV--------DIAAPGVGTILSTVPKLDGDGG-------GNYEYLSGTSMA 242
Query: 548 CPHVTGAAAFIKS 560
PHV+G AA + S
Sbjct: 243 APHVSGVAALVLS 255
|
Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 273 |
| >gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-08
Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 150 DIVIGVIDTGIWPESPSF-NDQGMGEIPSRW----KGVCMESPDFKKSHCNRKLIGARHC 204
+++G+IDTGI P F N+ G I W G + ++I A
Sbjct: 5 GVLVGIIDTGIDYLHPEFRNEDGTTRILYIWDQTIPGGPPPGGYYGGGEYTEEIINA--- 61
Query: 205 SRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIA----- 259
+ AS N + SRD GHGTH A AAGN +N + G+A P + +
Sbjct: 62 ALASDNPYDIVPSRDENGHGTHVAGIAAGNGDNNPDFKGVA--------PEAELIVVKLK 113
Query: 260 SYKACKEGGCSGAAILQAIDDAIHDGVD-------------IISISIGLSNSEADYMNDP 306
K Q D I + +I+IS+G +N +
Sbjct: 114 QAKKYLREFYEDVPFYQETD--IMLAIKYLYDKALELNKPLVINISLG-TNFGSHDGTSL 170
Query: 307 I--AIGALHAQQRGVVVICSAGNDG 329
+ I A+ ++ RG+ V+ AGN+G
Sbjct: 171 LERYIDAI-SRLRGIAVVVGAGNEG 194
|
GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 455 |
| >gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
Score = 54.8 bits (133), Expect = 4e-08
Identities = 40/162 (24%), Positives = 59/162 (36%), Gaps = 43/162 (26%)
Query: 206 RASTNKD--NSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKA 263
RA D D GHGTH A T G G A+ A+ A
Sbjct: 46 RAIWGADFVGGDPDSDCNGHGTHVAGTVGGKTY----------GVAKK-------ANLVA 88
Query: 264 CKEGGCSG----AAILQAIDDAIHDGVD-----IISISIGLSNSEADYMNDPIAIGALHA 314
K C+G + I+ ++ +D + ++S+G S A ++ +A A
Sbjct: 89 VKVLDCNGSGTLSGIIAGLEWVANDATKRGKPAVANMSLGGGASTA--LDAAVA----AA 142
Query: 315 QQRGVVVICSAGNDG----PY-PFTVANTAPWLFTVAASTID 351
GVVV+ +AGN Y P + TV A+ D
Sbjct: 143 VNAGVVVVVAAGNSNQDACNYSPASAPEA----ITVGATDSD 180
|
The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K. Length = 255 |
| >gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 5e-08
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
A FS+ G + D+ APGV +L+A + A SGTSMA
Sbjct: 184 ASFSNYGSCV--------DIFAPGVDILSAWI------------GSDTATATLSGTSMAA 223
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTATV 580
PHV G AA++ S+ + + +K+ L+ AT
Sbjct: 224 PHVAGLAAYLLSLGPDLSPAEVKARLLNLATK 255
|
The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K. Length = 255 |
| >gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 6e-08
Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 36/213 (16%)
Query: 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRA 207
+ D+V+ VIDTG+ P + W E P + +
Sbjct: 1 SGDVVVAVIDTGVDYNHPDL-------KDNMWVNP-GEIPGNGIDDDGNGYVDDIYGWNF 52
Query: 208 STNKDNSGSSRDPLGHGTHTAST--AAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC- 264
N ++ D GHGTH A A GN N I G+AG +I K
Sbjct: 53 VNNDNDPM---DDNGHGTHVAGIIGAVGN---NGI--GIAGVAWNV-----KIMPLKFLG 99
Query: 265 KEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICS 324
+G + + ++AID A+ G II+ S G + AI A G++ + +
Sbjct: 100 ADGSGTTSDAIKAIDYAVDMGAKIINNSWGGGGPSQALRD---AIAR--AIDAGILFVAA 154
Query: 325 AGNDG------PYPFTVANTAPWLFTVAASTID 351
AGNDG P + + + +VAA+ +
Sbjct: 155 AGNDGTNNDKTPT-YPASYDLDNIISVAATDSN 186
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 259 |
| >gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 9e-08
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVP---RPDRPGGIPAGEKPATYALRSGTS 545
A +S+ GP + DV+APG + + G G +TY GTS
Sbjct: 204 ASYSNYGPAV--------DVSAPGGDCASDVNGDGYPDSNTGTTSPGG--STYGFLQGTS 253
Query: 546 MACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577
MA PHV G AA +KSV T + I+S L +T
Sbjct: 254 MAAPHVAGVAALMKSVNPSLTPAQIESLLQST 285
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 285 |
| >gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 1e-07
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 23/90 (25%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
A FS+ G + DV+APG GGI + YA SGTSMA
Sbjct: 190 ASFSNYGKWV--------DVSAPG--------------GGILSTTPDGDYAYMSGTSMAT 227
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTA 578
PHV G AA + S + + S ++ AL TA
Sbjct: 228 PHVAGVAALLYS-QGPLSASEVRDALKKTA 256
|
Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values. Length = 260 |
| >gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 55/236 (23%), Positives = 78/236 (33%), Gaps = 72/236 (30%)
Query: 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAST 209
+ + V+DTGI P+F G + + F
Sbjct: 9 GVRVAVLDTGIDLTHPAF------------AGRDITTKSFV------------------- 37
Query: 210 NKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGC 269
+D GHGTH A T G V Y G ARG K +GG
Sbjct: 38 ---GGEDVQDGHGHGTHCAGTIFGRDVPGPRY-----GVARGA---EIALIGKVLGDGGG 86
Query: 270 SGAAILQAIDDAIHDGVDIISISIG--------------LSNSEA-----DYMNDPIAI- 309
IL I A+ +G D+IS+S+G L+ S A A+
Sbjct: 87 GDGGILAGIQWAVANGADVISMSLGADFPGLVDQGWPPGLAFSRALEAYRQRARLFDALM 146
Query: 310 ---GALHAQQRGVVVICSAGNDGP---YPFTVANTA--PWLFTVAASTIDRDFQST 357
A A RG +++ +AGN+ V N A P VAA + ++
Sbjct: 147 TLVAAQAALARGTLIVAAAGNESQRPAGIPPVGNPAACPSAMGVAA--VGALGRTG 200
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 297 |
| >gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 14/51 (27%)
Query: 506 PDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAA 556
D+AAPGV +++A PGG Y SGTSMA PHV G AA
Sbjct: 213 VDIAAPGVDIVSA------APGG--------GYRSMSGTSMATPHVAGVAA 249
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 297 |
| >gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 51.9 bits (123), Expect = 1e-06
Identities = 54/252 (21%), Positives = 83/252 (32%), Gaps = 49/252 (19%)
Query: 143 KYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR 202
+ + VIDTG+ P + DF
Sbjct: 136 GAGLTGKGVTVAVIDTGVDASHPDLAGSAVAG------------GDF------------- 170
Query: 203 HCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK 262
+ D D GHGTH A T A N +P +++ K
Sbjct: 171 ------VDGDPEPPFLDDNGHGTHVAGTIAAVIFDNGAGVAGV-------APGAKLLLVK 217
Query: 263 ACKEGGCSG--AAILQAIDDAI--HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRG 318
GG SG + + + I+ A D+I++S+G S S++ A+ A A G
Sbjct: 218 VLGSGGGSGELSDVAEGIEGAANLGGPADVINLSLGGSLSDSASPALGDALAAA-ANAGG 276
Query: 319 VVVICSAGNDGPYPFTVANTAPWLF------TVAASTIDRDFQSTVLLGNGKAIKGTAIS 372
VV++ +AGNDG P + V A + S G+ + A
Sbjct: 277 VVIVAAAGNDGSNASGGDLAYPASYPAPNVIAVGALDLSDTVASFSNDGSPTGVDIAAPG 336
Query: 373 LSNLSRSKTYPL 384
++ LS S L
Sbjct: 337 VNILSLSAVNTL 348
|
Length = 508 |
| >gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 3e-06
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 31/163 (19%)
Query: 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSG 271
N+ D GHGTHT T GN G G +P +R + +A G +
Sbjct: 43 GNTPLPYDDNGHGTHTMGTMVGNDG---------DGQQIGVAPGARWIACRALDRNGGND 93
Query: 272 AAILQAID--DAIHD----------GVDIISISIGLSNSEADYMNDPIAIGALHAQQRGV 319
A L+ A D D+I+ S G + + +++ A+ A A G+
Sbjct: 94 ADYLRCAQWMLAPTDSAGNPADPDLAPDVINNSWGGPSGDNEWLQP--AVAAWRAA--GI 149
Query: 320 VVICSAGNDGPYPFTVANTA---PWLFTVAASTIDR---DFQS 356
+ +AGNDGP T+ P F V A+ + DF S
Sbjct: 150 FPVFAAGNDGPRCSTLNAPPANYPESFAVGATDRNDVLADFSS 192
|
Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Length = 264 |
| >gnl|CDD|173796 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 4e-06
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 223 HGTHTASTAAGNYVSNAIYFGLAGGTA----RGGSPFSRIASYKACKEGGCSGAAILQAI 278
HGTH A AA ++ G+A G + G +R+ S + +G A+++A+
Sbjct: 187 HGTHVAGIAAAHFPEEPERNGVAPGAQIVSIKIGD--TRLGSME-------TGTALVRAM 237
Query: 279 DDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQ---QRGVVVICSAGNDGPYPFTV 335
AI D+I++S G EA + + I L + + GV+ + SAGN+GP TV
Sbjct: 238 IAAIETKCDLINMSYG----EATHWPNSGRIIELMNEAVNKHGVIFVSSAGNNGPALSTV 293
|
Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing. Length = 412 |
| >gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 51/196 (26%), Positives = 73/196 (37%), Gaps = 54/196 (27%)
Query: 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTN 210
I I VID G P + E+ FK N +++G S N
Sbjct: 2 ITIAVIDAGF----PKVH----------------EAFAFKHLFKNLRILGEYDFVDNSNN 41
Query: 211 KDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACK-EGGC 269
+ + HGT ST AG Y + GTA ASY + E
Sbjct: 42 TNYTDDD-----HGTAVLSTMAG-YTPGVMV-----GTAPN-------ASYYLARTEDVA 83
Query: 270 SGAAI-----LQAIDDAIHDGVDIISISIGLS-------NSEADYMND---PIAIGALHA 314
S + + A + A GVDIIS S+G + + M+ I+ A A
Sbjct: 84 SETPVEEDNWVAAAEWADSLGVDIISSSLGYTTFDNPTYSYTYADMDGKTSFISRAANIA 143
Query: 315 QQRGVVVICSAGNDGP 330
+G++V+ SAGN+G
Sbjct: 144 ASKGMLVVNSAGNEGS 159
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 261 |
| >gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 2e-05
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 16/92 (17%)
Query: 487 VVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSM 546
A FSS GP + LKPDV A G + V D +GTS
Sbjct: 185 NKASFSSIGP--TADGRLKPDVMALGTGIY---VINGD-----------GNITYANGTSF 228
Query: 547 ACPHVTGAAAFIKSVRRKWTYSMIKSALMTTA 578
+CP + G A + WT IK A++ +A
Sbjct: 229 SCPLIAGLIACLWQAHPNWTNLQIKEAILKSA 260
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 261 |
| >gnl|CDD|173805 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 family domain in SKI-1-like proteins | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 3e-05
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
TN N + D LGHGT A A S G A P + I ++
Sbjct: 33 TNWTNEKTLDDGLGHGTFVAGVIAS---SREQCLGFA--------PDAEIYIFRVFTNNQ 81
Query: 269 CSGAA-ILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
S + L A + AI +D++++SIG D+M+ P ++++ + GN
Sbjct: 82 VSYTSWFLDAFNYAILTKIDVLNLSIG----GPDFMDKPFVDKVWELTANNIIMVSAIGN 137
Query: 328 DGPYPFTVANTAPWLFTVAASTIDRD 353
DGP T+ N A + + ID D
Sbjct: 138 DGPLYGTLNNPADQMDVIGVGGIDFD 163
|
SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 255 |
| >gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 8e-05
Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 22/148 (14%)
Query: 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGG----TARGGSPFSRIASYKACKEGGCSGAAI 274
D GHGT A AG + G+A R S + G +
Sbjct: 49 DCDGHGTLVAGIIAGRPGEGDGFSGVAPDARILPIRQTSAAFEPDEGTS---GVGDLGTL 105
Query: 275 LQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALH-AQQRGVVVICSAGNDG---- 329
+AI A G D+I+IS+ +DP A+ A +GVVV+ +AGN G
Sbjct: 106 AKAIRRAADLGADVINISLVACLPAGSGADDPELGAAVRYALDKGVVVVAAAGNTGGDGQ 165
Query: 330 ----PYPFTVANTAPWLFTVAASTIDRD 353
YP A + +A +IDRD
Sbjct: 166 KTTVVYP------AWYPGVLAVGSIDRD 187
|
Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]. Length = 350 |
| >gnl|CDD|173797 cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 22/126 (17%)
Query: 223 HGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAI 282
HGT AS AG G G + +A G S A+ +A+D
Sbjct: 38 HGTAVASLLAGAGAQRP-------GLLPGADLYGADVFGRAGGGEGASALALARALDWLA 90
Query: 283 HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGP---------YPF 333
GV +++IS+ N +A A RG+V++ +AGNDGP YP
Sbjct: 91 EQGVRVVNISLAGPP------NALLAAAVAAAAARGMVLVAAAGNDGPAAPPLYPAAYPG 144
Query: 334 TVANTA 339
+A TA
Sbjct: 145 VIAVTA 150
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 239 |
| >gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 18/75 (24%)
Query: 508 VAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTY 567
+AAPG + + PD G Y SGTS A PHV+GAAA + K+ +
Sbjct: 208 LAAPGENIYSTD---PDGGNG---------YGRVSGTSFAAPHVSGAAALLAQ---KFPW 252
Query: 568 ---SMIKSALMTTAT 579
++ L+TTAT
Sbjct: 253 LTADQVRQTLLTTAT 267
|
Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface. Length = 267 |
| >gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 38/162 (23%), Positives = 59/162 (36%), Gaps = 19/162 (11%)
Query: 484 PAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSG 543
+ VA FS+ G D+AAPGV +L+ G A Y SG
Sbjct: 314 LSDTVASFSNDGSPT------GVDIAAPGVNILSLSAVNTLPGDG-------ADYVTLSG 360
Query: 544 TSMACPHVTGAAAFIKSVR-RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPH--- 599
TSMA PHV+G AA + S + T + +++ ++TTA + +G G
Sbjct: 361 TSMAAPHVSGVAALVLSANPNELTPAQVRNLIVTTAGLTPLSGVDNLVGGGLANLDAAAT 420
Query: 600 --EMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNI 639
G N + + T+ L + +
Sbjct: 421 DVAGGTLPANGTGSSQGAVEAPGTLALLTPALGGTVPAAVAV 462
|
Length = 508 |
| >gnl|CDD|173802 cd07476, Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease, Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 223 HGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSR--IASYKACKEGGCSGAAILQAIDD 280
HGTH AS + FG + G +P R A GCS + +AI+
Sbjct: 52 HGTHVAS----------LIFGQPCSSVEGIAPLCRGLNIPIFAEDRRGCSQLDLARAINL 101
Query: 281 AIHDGVDIISISIGL--SNSEADYMNDPIAIGALH-AQQRGVVVICSAGNDG 329
A+ G II+IS G EA DPI A+ QQ V+++ +AGN+G
Sbjct: 102 ALEQGAHIINISGGRLTQTGEA----DPILANAVAMCQQNNVLIVAAAGNEG 149
|
Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Length = 267 |
| >gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 14/73 (19%)
Query: 507 DVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWT 566
DV APG + + PD Y SGTSMA P V+G AA I S T
Sbjct: 233 DVFAPGERIYSTT---PDN-----------EYETDSGTSMAAPVVSGVAALIWSYYPNLT 278
Query: 567 YSMIKSALMTTAT 579
+K ++ +
Sbjct: 279 AKEVKQIILESGV 291
|
Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin.. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 291 |
| >gnl|CDD|173796 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 28/97 (28%)
Query: 492 SSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRS-----GTSM 546
SSRGP + L ++APG AI P + L+ GTSM
Sbjct: 333 SSRGPT--ADGALGVSISAPG----GAIASVP-------------NWTLQGSQLMNGTSM 373
Query: 547 ACPHVTGAAAFI----KSVRRKWTYSMIKSALMTTAT 579
+ P+ G A + K+ +T ++ AL TA
Sbjct: 374 SSPNACGGIALLLSGLKAEGIPYTPYSVRRALENTAK 410
|
Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing. Length = 412 |
| >gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 219 DPLGHGTHTASTAAGN-YVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGC-------S 270
D HGT AS AAG + +Y RG +P ++IA+ KA G +
Sbjct: 54 DFFSHGTSCASVAAGRGKMEYNLYGYTGKFLIRGIAPDAKIAAVKALWFGDVIYAWLWTA 113
Query: 271 GAAILQAIDDAIHDG---VDIISISIGLSNSEADYMN---DPIA--IGALHAQQRGVVVI 322
G + I+ G VD+IS S G+SN D + I AL GV ++
Sbjct: 114 GFDPVDRKLSWIYTGGPRVDVISNSWGISNFAYTGYAPGLDISSLVIDAL-VTYTGVPIV 172
Query: 323 CSAGNDGPYPFTVANTAP----WLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375
+AGN GP T+ TAP +V A+T + D++ L G G +S S+
Sbjct: 173 SAAGNGGPGYGTI--TAPGAASLAISVGAAT-NFDYRPFYLFGYLPGGSGDVVSWSS 226
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 311 |
| >gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
V +SSRGP KPD+AA G A R GG A + + L GTSMA
Sbjct: 221 VVSWSSRGPS--IAGDPKPDLAAIGAFAWAPG--RVLDSGG--ALDGNEAFDLFGGTSMA 274
Query: 548 CPHVTGAAAFI------KSVRRKWTYSMIKSALMTTA 578
P G+AA + K ++ ++++ LM+TA
Sbjct: 275 TPMTAGSAALVISALKEKEGVGEYDPFLVRTILMSTA 311
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 311 |
| >gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 15/90 (16%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALR-SGTSMA 547
A +S+ G + D+ APGV G AG+ P SGTS A
Sbjct: 167 ASYSNYGNYV--------DLVAPGVG------IWTTGTGRGSAGDYPGGGYGSFSGTSFA 212
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577
P G AA I S T + ++ L +T
Sbjct: 213 SPVAAGVAALILSANPNLTPAEVEDILTST 242
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 242 |
| >gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 8e-04
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 32/122 (26%)
Query: 491 FSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPH 550
FS GP D+AAPG +++ PGG A SGTS A P
Sbjct: 193 FSLPGP--------WVDLAAPGENIVSL------SPGG-------DGLATTSGTSFAAPF 231
Query: 551 VTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLK 610
V+G AA ++S T + ++ + TA D+ + +G G ++P+
Sbjct: 232 VSGTAALVRSRFPDLTAAQVRRRIEATA---DHPARGGRDDY--------VGYGVVDPVA 280
Query: 611 AL 612
AL
Sbjct: 281 AL 282
|
Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]. Length = 350 |
| >gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 46/207 (22%), Positives = 66/207 (31%), Gaps = 38/207 (18%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
++GV DTG+ F D + +RK++
Sbjct: 7 KGQIVGVADTGLDTNHCFFYDPNFNKTNLF----------------HRKIVRYDSL---- 46
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAG---NYVSNAIYFGLAGGTARGGSPFSRIASYKACK 265
S + D GHGTH A AG + S ++Y G+A A+ F I
Sbjct: 47 -----SDTKDDVDGHGTHVAGIIAGKGNDSSSISLYKGVAPK-AKLY--FQDIGDTSGNL 98
Query: 266 EGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSA 325
+ + DA G I S S G S Y A ++ + SA
Sbjct: 99 SSPPDLNKLFSPMYDA---GARISSNSWG-SPVNNGYTLLARAYDQFAYNNPDILFVFSA 154
Query: 326 GNDGPYPFTVANTAPW---LFTVAAST 349
GNDG + + TV AS
Sbjct: 155 GNDGNDGSNTIGSPATAKNVLTVGASN 181
|
Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases. Length = 293 |
| >gnl|CDD|173793 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCS- 270
D G + D LGHGT A A+Y L P R+ S + G +
Sbjct: 29 DEPGWTADDLGHGTAVAGL--------ALYGDLTLPGNGLPRPGCRLESVRVLPPNGEND 80
Query: 271 ----GAAILQAIDDAI---HDGVDIISISIGLSNSEADYMNDPIAIGAL---HAQQRGVV 320
G L+AI A+ D V + ++S+G D P + A A + V+
Sbjct: 81 PELYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPIDD--GRPSSWAAALDQLAAEYDVL 138
Query: 321 VICSAGNDGP 330
+ SAGN G
Sbjct: 139 FVVSAGNLGD 148
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 291 |
| >gnl|CDD|173797 cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 15/72 (20%)
Query: 507 DVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWT 566
D AAPGV V A PGG Y SGTS A P VT A A +
Sbjct: 168 DFAAPGVDVWVA------APGG--------GYRYVSGTSFAAPFVTAALALLLQASPLAP 213
Query: 567 YSMIKSALMTTA 578
++ L TA
Sbjct: 214 -DDARARLAATA 224
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 239 |
| >gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
Query: 484 PAPVVAYFSSRGPGLPT-ENILKPDVAAP-GVAVLAAIVPRPDRPGGIPAGEKPATYALR 541
P + F G LPT E KPDV AP GV P +
Sbjct: 168 PGGTPSSFDPVGIRLPTPEVRQKPDVTAPDGVNG----------TVDGDGDGPPNFF--- 214
Query: 542 SGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
GTS A PH G AA + S T + I+ AL +TA
Sbjct: 215 -GTSAAAPHAAGVAALVLSANPGLTPADIRDALRSTAL 251
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase. Length = 275 |
| >gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 33/117 (28%), Positives = 39/117 (33%), Gaps = 19/117 (16%)
Query: 267 GGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQ-------QRGV 319
G AI G DII IG Y+N+P AQ GV
Sbjct: 72 AGGGELDFAAAIRALAAAGADIIVDDIG-------YLNEPFFQDGPIAQAVDEVVASPGV 124
Query: 320 VVICSAGNDGPYPFTVA-NTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375
+ SAGNDG AP V A D+ +T G+ A GT S
Sbjct: 125 LYFSSAGNDGQSGSIFGHAAAPGAIAVGAV----DYGNTPAFGSDPAPGGTPSSFDP 177
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase. Length = 275 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 760 | |||
| cd04852 | 307 | Peptidases_S8_3 Peptidase S8 family domain, unchar | 100.0 | |
| PTZ00262 | 639 | subtilisin-like protease; Provisional | 100.0 | |
| cd05562 | 275 | Peptidases_S53_like Peptidase domain in the S53 fa | 100.0 | |
| cd07497 | 311 | Peptidases_S8_14 Peptidase S8 family domain, uncha | 100.0 | |
| cd07479 | 255 | Peptidases_S8_SKI-1_like Peptidase S8 family domai | 100.0 | |
| cd07478 | 455 | Peptidases_S8_CspA-like Peptidase S8 family domain | 100.0 | |
| cd07475 | 346 | Peptidases_S8_C5a_Peptidase Peptidase S8 family do | 100.0 | |
| cd07489 | 312 | Peptidases_S8_5 Peptidase S8 family domain, unchar | 100.0 | |
| cd07476 | 267 | Peptidases_S8_thiazoline_oxidase_subtilisin-like_p | 100.0 | |
| cd05561 | 239 | Peptidases_S8_4 Peptidase S8 family domain, unchar | 100.0 | |
| cd07474 | 295 | Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam | 100.0 | |
| cd07483 | 291 | Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa | 100.0 | |
| cd07481 | 264 | Peptidases_S8_BacillopeptidaseF-like Peptidase S8 | 100.0 | |
| cd07493 | 261 | Peptidases_S8_9 Peptidase S8 family domain, unchar | 100.0 | |
| KOG1153 | 501 | consensus Subtilisin-related protease/Vacuolar pro | 100.0 | |
| cd04857 | 412 | Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid | 100.0 | |
| cd07487 | 264 | Peptidases_S8_1 Peptidase S8 family domain, unchar | 100.0 | |
| cd07485 | 273 | Peptidases_S8_Fervidolysin_like Peptidase S8 famil | 100.0 | |
| cd04077 | 255 | Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 | 100.0 | |
| cd04847 | 291 | Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil | 100.0 | |
| cd07484 | 260 | Peptidases_S8_Thermitase_like Peptidase S8 family | 100.0 | |
| cd07490 | 254 | Peptidases_S8_6 Peptidase S8 family domain, unchar | 100.0 | |
| cd07496 | 285 | Peptidases_S8_13 Peptidase S8 family domain, uncha | 100.0 | |
| cd07494 | 298 | Peptidases_S8_10 Peptidase S8 family domain, uncha | 100.0 | |
| cd07498 | 242 | Peptidases_S8_15 Peptidase S8 family domain, uncha | 100.0 | |
| cd07473 | 259 | Peptidases_S8_Subtilisin_like Peptidase S8 family | 100.0 | |
| cd04842 | 293 | Peptidases_S8_Kp43_protease Peptidase S8 family do | 100.0 | |
| cd07477 | 229 | Peptidases_S8_Subtilisin_subset Peptidase S8 famil | 100.0 | |
| cd07480 | 297 | Peptidases_S8_12 Peptidase S8 family domain, uncha | 100.0 | |
| cd04843 | 277 | Peptidases_S8_11 Peptidase S8 family domain, uncha | 100.0 | |
| cd07491 | 247 | Peptidases_S8_7 Peptidase S8 family domain, unchar | 100.0 | |
| PF00082 | 282 | Peptidase_S8: Subtilase family This is family S8 i | 100.0 | |
| cd07492 | 222 | Peptidases_S8_8 Peptidase S8 family domain, unchar | 100.0 | |
| cd07482 | 294 | Peptidases_S8_Lantibiotic_specific_protease Peptid | 100.0 | |
| cd04059 | 297 | Peptidases_S8_Protein_convertases_Kexins_Furin-lik | 100.0 | |
| cd04848 | 267 | Peptidases_S8_Autotransporter_serine_protease_like | 100.0 | |
| KOG4266 | 1033 | consensus Subtilisin kexin isozyme-1/site 1 protea | 100.0 | |
| KOG1114 | 1304 | consensus Tripeptidyl peptidase II [Posttranslatio | 100.0 | |
| cd07488 | 247 | Peptidases_S8_2 Peptidase S8 family domain, unchar | 100.0 | |
| cd00306 | 241 | Peptidases_S8_S53 Peptidase domain in the S8 and S | 99.98 | |
| COG1404 | 508 | AprE Subtilisin-like serine proteases [Posttransla | 99.91 | |
| KOG3526 | 629 | consensus Subtilisin-like proprotein convertase [P | 99.89 | |
| cd04056 | 361 | Peptidases_S53 Peptidase domain in the S53 family. | 99.72 | |
| PF05922 | 82 | Inhibitor_I9: Peptidase inhibitor I9; InterPro: IP | 98.89 | |
| PF06280 | 112 | DUF1034: Fn3-like domain (DUF1034); InterPro: IPR0 | 98.65 | |
| KOG3525 | 431 | consensus Subtilisin-like proprotein convertase [P | 98.58 | |
| cd02133 | 143 | PA_C5a_like PA_C5a_like: Protease-associated domai | 98.4 | |
| COG4934 | 1174 | Predicted protease [Posttranslational modification | 98.37 | |
| cd02120 | 126 | PA_subtilisin_like PA_subtilisin_like: Protease-as | 98.24 | |
| cd04816 | 122 | PA_SaNapH_like PA_SaNapH_like: Protease-associated | 97.29 | |
| cd02122 | 138 | PA_GRAIL_like PA _GRAIL_like: Protease-associated | 97.04 | |
| PF02225 | 101 | PA: PA domain; InterPro: IPR003137 The PA (Proteas | 96.95 | |
| cd02130 | 122 | PA_ScAPY_like PA_ScAPY_like: Protease-associated d | 96.81 | |
| cd02129 | 120 | PA_hSPPL_like PA_hSPPL_like: Protease-associated d | 96.78 | |
| cd02127 | 118 | PA_hPAP21_like PA_hPAP21_like: Protease-associated | 96.78 | |
| cd04818 | 118 | PA_subtilisin_1 PA_subtilisin_1: Protease-associat | 96.77 | |
| cd02124 | 129 | PA_PoS1_like PA_PoS1_like: Protease-associated (PA | 96.64 | |
| cd00538 | 126 | PA PA: Protease-associated (PA) domain. The PA dom | 96.62 | |
| cd02126 | 126 | PA_EDEM3_like PA_EDEM3_like: protease associated d | 96.56 | |
| PF14874 | 102 | PapD-like: Flagellar-associated PapD-like | 96.49 | |
| cd02132 | 139 | PA_GO-like PA_GO-like: Protease-associated domain | 96.34 | |
| cd02125 | 127 | PA_VSR PA_VSR: Protease-associated (PA) domain-con | 96.15 | |
| cd04819 | 127 | PA_2 PA_2: Protease-associated (PA) domain subgrou | 95.9 | |
| cd04813 | 117 | PA_1 PA_1: Protease-associated (PA) domain subgrou | 95.68 | |
| cd02123 | 153 | PA_C_RZF_like PA_C-RZF_ like: Protease-associated | 95.65 | |
| cd04817 | 139 | PA_VapT_like PA_VapT_like: Protease-associated dom | 95.49 | |
| PF10633 | 78 | NPCBM_assoc: NPCBM-associated, NEW3 domain of alph | 95.15 | |
| PF11614 | 118 | FixG_C: IG-like fold at C-terminal of FixG, putati | 89.69 | |
| PF06030 | 121 | DUF916: Bacterial protein of unknown function (DUF | 88.29 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 85.67 |
| >cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-51 Score=438.31 Aligned_cols=298 Identities=54% Similarity=0.772 Sum_probs=254.1
Q ss_pred cccccCCCccccccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccC
Q 036830 117 LQLHTTRSWDFLAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHC 194 (760)
Q Consensus 117 ~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~ 194 (760)
++++++++++++++.... ...+|..+ |+||+|||||||||++||+|.+.+..+++..|.+.|..+..+....|
T Consensus 1 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (307)
T cd04852 1 YQLHTTRSPDFLGLPGAW-----GGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFNPFSC 75 (307)
T ss_pred CCccccCCHHHcCCCCCC-----CcccccccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcCccCc
Confidence 467889999999987522 23356666 99999999999999999999998888999999999999988887889
Q ss_pred ccceecccccCCCCCCC------CCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC
Q 036830 195 NRKLIGARHCSRASTNK------DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268 (760)
Q Consensus 195 n~ki~g~~~~~~~~~~~------~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g 268 (760)
|+|+++.++|.+++... .+..++.|..||||||||||||+...+....|...+.+.||||+|+|+.+|+++..+
T Consensus 76 ~~ki~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~~~~~~~~~GvAP~a~l~~~kv~~~~~ 155 (307)
T cd04852 76 NNKLIGARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDG 155 (307)
T ss_pred CCeEEEEEEcccchhhccCcccccCCCCCccCCCCchhhhhhhcCCCcccccccccccccEEEECCCCeEEEEEEecCCC
Confidence 99999999998764321 234667889999999999999998776666666677889999999999999998844
Q ss_pred -CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEecc
Q 036830 269 -CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAA 347 (760)
Q Consensus 269 -~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA 347 (760)
+..+++++||++|++++++|||||||... .....+.+..++..+.++|++||+||||+|+...+.++..||+++||+
T Consensus 156 ~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~--~~~~~~~~~~~~~~a~~~gilvV~aAGN~g~~~~~~~~~~~~vi~Vga 233 (307)
T cd04852 156 GCFGSDILAAIDQAIADGVDVISYSIGGGS--PDPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAA 233 (307)
T ss_pred CccHHHHHHHHHHHHHcCCCEEEeCCCCCC--CCcccCHHHHHHHHHHhCCCEEEEECCCCCCCCCcccCCCCCeEEEEe
Confidence 88999999999999999999999999984 245667888888899999999999999999888888888999999997
Q ss_pred ccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCce
Q 036830 348 STIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQ 427 (760)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~ 427 (760)
++
T Consensus 234 ~~------------------------------------------------------------------------------ 235 (307)
T cd04852 234 ST------------------------------------------------------------------------------ 235 (307)
T ss_pred cc------------------------------------------------------------------------------
Confidence 31
Q ss_pred EEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCc
Q 036830 428 GLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPD 507 (760)
Q Consensus 428 ~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 507 (760)
+|||
T Consensus 236 ----------------------------------------------------------------------------~~~d 239 (307)
T cd04852 236 ----------------------------------------------------------------------------LKPD 239 (307)
T ss_pred ----------------------------------------------------------------------------Cccc
Confidence 4679
Q ss_pred eeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 508 VAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 508 I~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
|+|||.+|++++..... .........|..++|||||||+|||++|||+|++|+|+|+|||++|++||+
T Consensus 240 i~apG~~i~~~~~~~~~----~~~~~~~~~~~~~sGTS~AaP~vaG~aALl~~~~p~~t~~~v~~~L~~tA~ 307 (307)
T cd04852 240 IAAPGVDILAAWTPEGA----DPGDARGEDFAFISGTSMASPHVAGVAALLKSAHPDWSPAAIKSALMTTAY 307 (307)
T ss_pred eeeccCceeecccCccc----cccCCCCCcEEEeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 99999999999864211 112223378999999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >PTZ00262 subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-50 Score=448.07 Aligned_cols=302 Identities=18% Similarity=0.168 Sum_probs=215.9
Q ss_pred cccccccC----CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCcccc---ccccCCCCCcccCccceecccccCCCCCCCC
Q 036830 140 FNHKYHKA----ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKG---VCMESPDFKKSHCNRKLIGARHCSRASTNKD 212 (760)
Q Consensus 140 ~~~~~~~~----G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g---~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~ 212 (760)
++++|+.. |+||+|||||||||++||||.+.-... +....| ....+..+ ... ..+++|.++
T Consensus 303 ~~~aw~~~~~~~g~gV~VAVIDTGID~~HPDL~~ni~~n-~~el~GrdgiDdD~nG~-----vdd-~~G~nfVd~----- 370 (639)
T PTZ00262 303 LDETQELIEPHEVNDTNICVIDSGIDYNHPDLHDNIDVN-VKELHGRKGIDDDNNGN-----VDD-EYGANFVNN----- 370 (639)
T ss_pred chHHHHHhhccCCCCcEEEEEccCCCCCChhhhhhcccc-cccccCccccccccCCc-----ccc-cccccccCC-----
Confidence 55666532 999999999999999999998521000 000001 00000000 011 122344332
Q ss_pred CCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEe
Q 036830 213 NSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISI 291 (760)
Q Consensus 213 ~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~ 291 (760)
...+.|.+||||||||||||...++ ..+.||||+|+|+.+|++++.+ +..+++++||+||++.|++||||
T Consensus 371 -~~~P~D~~GHGTHVAGIIAA~gnN~--------~Gi~GVAP~AkLi~vKVld~~G~G~~sdI~~AI~yA~~~GA~VINm 441 (639)
T PTZ00262 371 -DGGPMDDNYHGTHVSGIISAIGNNN--------IGIVGVDKRSKLIICKALDSHKLGRLGDMFKCFDYCISREAHMING 441 (639)
T ss_pred -CCCCCCCCCcchHHHHHHhccccCC--------CceeeeecccccceEEEecCCCCccHHHHHHHHHHHHHCCCCEEEe
Confidence 2456889999999999999986432 2347999999999999998777 88899999999999999999999
Q ss_pred cccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC--------------ccC----CCCceEEecccccccc
Q 036830 292 SIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT--------------VAN----TAPWLFTVAASTIDRD 353 (760)
Q Consensus 292 SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--------------~~~----~~p~vitVgA~~~~~~ 353 (760)
|||+.. ....+..++.+|.++|++||+||||+|..... ++. ..|++|+|||++.+.
T Consensus 442 SlG~~~-----~s~~l~~AV~~A~~kGILVVAAAGN~g~~~~s~p~~~~~d~~~~~~YPaa~s~~~~nVIaVGAv~~d~- 515 (639)
T PTZ00262 442 SFSFDE-----YSGIFNESVKYLEEKGILFVVSASNCSHTKESKPDIPKCDLDVNKVYPPILSKKLRNVITVSNLIKDK- 515 (639)
T ss_pred ccccCC-----ccHHHHHHHHHHHHCCCEEEEeCCCCCCCcccccccccccccccccCChhhhccCCCEEEEeeccCCC-
Confidence 999873 34567788899999999999999999854321 121 235677777653221
Q ss_pred ceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEc
Q 036830 354 FQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFIN 433 (760)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~ 433 (760)
T Consensus 516 -------------------------------------------------------------------------------- 515 (639)
T PTZ00262 516 -------------------------------------------------------------------------------- 515 (639)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCc
Q 036830 434 DDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGV 513 (760)
Q Consensus 434 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~ 513 (760)
.....++.||++|.. ++||+|||+
T Consensus 516 -------------------------------------------------~~~~s~s~~Snyg~~-------~VDIaAPG~ 539 (639)
T PTZ00262 516 -------------------------------------------------NNQYSLSPNSFYSAK-------YCQLAAPGT 539 (639)
T ss_pred -------------------------------------------------CCcccccccccCCCC-------cceEEeCCC
Confidence 000123456666532 349999999
Q ss_pred eEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCC
Q 036830 514 AVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSG 593 (760)
Q Consensus 514 ~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~ 593 (760)
+|+|+++. +.|..++|||||||||||+||||++++|+|+++||+++|++||.++..
T Consensus 540 dI~St~p~--------------g~Y~~~SGTSmAAP~VAGvAALLlS~~P~LT~~qV~~iL~~TA~~l~~---------- 595 (639)
T PTZ00262 540 NIYSTFPK--------------NSYRKLNGTSMAAPHVAAIASLILSINPSLSYEEVIRILKESIVQLPS---------- 595 (639)
T ss_pred CeeeccCC--------------CceeecCCCchhHHHHHHHHHHHHhhCCCCCHHHHHHHHHHhCccCCC----------
Confidence 99999876 789999999999999999999999999999999999999999986521
Q ss_pred CCCCCCCCCC-cccCccccCCCceeeecChhhHHhhhhhcCC
Q 036830 594 NNANPHEMGA-GEINPLKALNPGLVFKTTIKDYLRFLCYYGY 634 (760)
Q Consensus 594 ~~~~~~~~G~-G~vn~~~Al~~~l~~~~~~~~~~~~~~~~g~ 634 (760)
.+..+|| |+||+++||+.++.+.. .++.++-+++|
T Consensus 596 ---~~n~~~wgG~LDa~kAV~~Ai~~~~---~~~~~~~~~~~ 631 (639)
T PTZ00262 596 ---LKNKVKWGGYLDIHHAVNLAIASKH---GRTEIAKSQSW 631 (639)
T ss_pred ---CCCccccCcEEcHHHHHHHHHhccc---cchhhcCchhH
Confidence 2222343 89999999997775543 33333344443
|
|
| >cd05562 Peptidases_S53_like Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=407.86 Aligned_cols=268 Identities=25% Similarity=0.208 Sum_probs=202.6
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|+|||||||.+||++.+-....++..+ .+... .....|..+|||||
T Consensus 4 G~gv~vaviDtGvd~~~~~~~~~~~~~l~~~~-----------------------~~~~~------~~~~~d~~gHGT~v 54 (275)
T cd05562 4 GTGIKIGVISDGFDGLGDAADDQASGDLPGNV-----------------------NVLGD------LDGGSGGGDEGRAM 54 (275)
T ss_pred CCceEEEEEeCCccccccccccccCCCCCcce-----------------------eeccc------cCCCCCCCchHHHH
Confidence 99999999999999999865432111111111 01100 13345788999999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHH
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPI 307 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~ 307 (760)
||||+ ||||+|+|+.+|+. ...+++++||+|+++.|++|||||||... ...+.+..+
T Consensus 55 Agii~------------------GvAP~a~l~~~~~~----~~~~~i~~ai~~a~~~g~~Vin~S~g~~~-~~~~~~~~~ 111 (275)
T cd05562 55 LEIIH------------------DIAPGAELAFHTAG----GGELDFAAAIRALAAAGADIIVDDIGYLN-EPFFQDGPI 111 (275)
T ss_pred HHHHh------------------ccCCCCEEEEEecC----CCHHHHHHHHHHHHHcCCCEEEecccccC-CCcccCCHH
Confidence 99995 89999999999875 45789999999999999999999999874 222334567
Q ss_pred HHHHHHHHhC-CcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeE
Q 036830 308 AIGALHAQQR-GVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLA 385 (760)
Q Consensus 308 ~~a~~~a~~~-Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~ 385 (760)
..+++++.++ |++||+||||+|.... ..++..|++|+|||++...........+.
T Consensus 112 ~~ai~~a~~~~GvlvVaAAGN~g~~~~~~~Pa~~~~vitVgA~~~~~~~~~~s~~~~----------------------- 168 (275)
T cd05562 112 AQAVDEVVASPGVLYFSSAGNDGQSGSIFGHAAAPGAIAVGAVDYGNTPAFGSDPAP----------------------- 168 (275)
T ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCCCccCCCCCCCeEEEEeeccCCCccccccccc-----------------------
Confidence 7888888887 9999999999997543 44677899999999865421100000000
Q ss_pred ecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhc
Q 036830 386 YGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINS 465 (760)
Q Consensus 386 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 465 (760)
T Consensus 169 -------------------------------------------------------------------------------- 168 (275)
T cd05562 169 -------------------------------------------------------------------------------- 168 (275)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCc-eEEeeecCCCCCCCCCCCCCCCCcceeeecc
Q 036830 466 NKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGV-AVLAAIVPRPDRPGGIPAGEKPATYALRSGT 544 (760)
Q Consensus 466 ~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~-~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGT 544 (760)
.......+.|+++||+. ++++||||+|||. ++.+.+.. +.|..++||
T Consensus 169 ----------------~~~~s~~~~~~~~~p~~--~~~~~~di~Apgg~~~~~~~~~--------------~~~~~~sGT 216 (275)
T cd05562 169 ----------------GGTPSSFDPVGIRLPTP--EVRQKPDVTAPDGVNGTVDGDG--------------DGPPNFFGT 216 (275)
T ss_pred ----------------CCCcccccCCcccCcCC--CCCcCCeEEcCCcccccCCCcC--------------Cceeecccc
Confidence 00012345678889987 7889999999975 44554433 679999999
Q ss_pred cchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 545 SMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 545 SmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
|||||||||++|||+|++|+|++++||++|++||+++. .+.++..||||+||+.+||+
T Consensus 217 S~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~-----------~~g~d~~~G~G~vda~~Av~ 274 (275)
T cd05562 217 SAAAPHAAGVAALVLSANPGLTPADIRDALRSTALDMG-----------EPGYDNASGSGLVDADRAVA 274 (275)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcccC-----------CCCCCCCcCcCcccHHHHhh
Confidence 99999999999999999999999999999999999763 23467789999999999986
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi |
| >cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-48 Score=412.64 Aligned_cols=288 Identities=28% Similarity=0.264 Sum_probs=192.5
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|||||||||++||+|.+... ..|+. .|+ +...+..+.++..+ ....+.|.+||||||
T Consensus 1 G~gV~VaViDTGid~~HPdl~~~~~----~~~~~------~~d---~~~~~~~g~d~~~~-----~~~~~~D~~gHGThv 62 (311)
T cd07497 1 GEGVVIAIVDTGVDYSHPDLDIYGN----FSWKL------KFD---YKAYLLPGMDKWGG-----FYVIMYDFFSHGTSC 62 (311)
T ss_pred CCCeEEEEEeCCcCCCChhHhcccC----CCccc------ccC---cCCCccCCcCCCCC-----ccCCCCCccccchhH
Confidence 8999999999999999999964211 00100 000 00112222222211 113467899999999
Q ss_pred hhhcccccccccccccc-cCCcccccCCCCeEEEEEeccCCC-CCHHHHHH-------HHHHHH--hCCCcEEEecccCC
Q 036830 228 ASTAAGNYVSNAIYFGL-AGGTARGGSPFSRIASYKACKEGG-CSGAAILQ-------AIDDAI--HDGVDIISISIGLS 296 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~-~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~-------ai~~a~--~~g~dVIN~SlG~~ 296 (760)
||||||....+.+.+|+ ....+.||||+|+|+.+|++...+ +....+.. +++|.+ +++++|||||||..
T Consensus 63 AGiiag~~~~~~~~~~~~~~~g~~GVAP~A~l~~vkvl~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~VIN~S~G~~ 142 (311)
T cd07497 63 ASVAAGRGKMEYNLYGYTGKFLIRGIAPDAKIAAVKALWFGDVIYAWLWTAGFDPVDRKLSWIYTGGPRVDVISNSWGIS 142 (311)
T ss_pred HHHHhccCcccccccccccccceeeeCCCCEEEEEEEEecCCcchhhhhhhccchhhhhhhhhhccCCCceEEEecCCcC
Confidence 99999986543222221 123568999999999999997543 33333333 344443 68999999999986
Q ss_pred CCCC---CCCCcHHHHHHHHH-HhCCcEEEEecCCCCCCCCC--ccCCCCceEEeccccccccceeeEEeCCCeeEeeee
Q 036830 297 NSEA---DYMNDPIAIGALHA-QQRGVVVICSAGNDGPYPFT--VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTA 370 (760)
Q Consensus 297 ~~~~---~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~~--~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~ 370 (760)
.... ....+..+..++.+ .++|+++|+||||+|+...+ .++.++++|+|||++.......
T Consensus 143 ~~~~~~~~~g~~~~~~~~d~~~~~~Gv~vV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~~~~~~-------------- 208 (311)
T cd07497 143 NFAYTGYAPGLDISSLVIDALVTYTGVPIVSAAGNGGPGYGTITAPGAASLAISVGAATNFDYRPF-------------- 208 (311)
T ss_pred CCCccccccCcCHHHHHHHHHHhcCCCEEEEeCCCCCCCCccccCccCCCCeEEEEeccCCcccch--------------
Confidence 3110 01122333333332 48999999999999976443 4567799999999864310000
Q ss_pred eecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEE
Q 036830 371 ISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAE 450 (760)
Q Consensus 371 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~ 450 (760)
+...+
T Consensus 209 -----------~~~~~---------------------------------------------------------------- 213 (311)
T cd07497 209 -----------YLFGY---------------------------------------------------------------- 213 (311)
T ss_pred -----------hhhcc----------------------------------------------------------------
Confidence 00000
Q ss_pred echhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCC
Q 036830 451 VGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIP 530 (760)
Q Consensus 451 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~ 530 (760)
.....+.++.||||||+. ++++||||+|||++|+++.+..... .
T Consensus 214 ------------------------------~~~~~~~~~~fSs~Gp~~--~g~~kPdv~ApG~~i~s~~~~~~~~----~ 257 (311)
T cd07497 214 ------------------------------LPGGSGDVVSWSSRGPSI--AGDPKPDLAAIGAFAWAPGRVLDSG----G 257 (311)
T ss_pred ------------------------------ccCCCCCccccccCCCCc--ccCCCCceeccCcceEeecccCCCC----c
Confidence 011236689999999998 8999999999999999987643210 0
Q ss_pred CCCCCCcceeeecccchhhhHHHHHHHHHHhCC------CCCHHHHHHHHHhcc
Q 036830 531 AGEKPATYALRSGTSMACPHVTGAAAFIKSVRR------KWTYSMIKSALMTTA 578 (760)
Q Consensus 531 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P------~ls~~~ik~~L~~TA 578 (760)
.......|..++|||||||||||++|||+|++| .++|++||++|++||
T Consensus 258 ~~~~~~~y~~~sGTSmAaP~VaG~aALll~~~~~~~~~~~~~~~~vk~~L~~tA 311 (311)
T cd07497 258 ALDGNEAFDLFGGTSMATPMTAGSAALVISALKEKEGVGEYDPFLVRTILMSTA 311 (311)
T ss_pred ccCCCcceeeecchhhhhHHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHHHhcC
Confidence 111225799999999999999999999999886 689999999999997
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-48 Score=402.08 Aligned_cols=240 Identities=26% Similarity=0.355 Sum_probs=196.9
Q ss_pred cccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCC
Q 036830 144 YHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPL 221 (760)
Q Consensus 144 ~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~ 221 (760)
|+++ |+||+|||||||||.+||+|.+.. ...+|... ....|..
T Consensus 1 W~~g~tG~gv~VaviDsGv~~~hp~l~~~~----------------------------~~~~~~~~-------~~~~d~~ 45 (255)
T cd07479 1 WQLGYTGAGVKVAVFDTGLAKDHPHFRNVK----------------------------ERTNWTNE-------KTLDDGL 45 (255)
T ss_pred CCCCCCCCCCEEEEEeCCCCCCCcchhccc----------------------------cccccCCC-------CCCCCCC
Confidence 6777 999999999999999999997310 00111111 3345778
Q ss_pred CccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCC
Q 036830 222 GHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEA 300 (760)
Q Consensus 222 gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~ 300 (760)
||||||||||+|+.. .+.||||+|+|+.+|++.+.+ ...+.++++++|+++.+++|||||||...
T Consensus 46 gHGT~VAGiIa~~~~-----------~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~a~~~a~~~~~~Vin~S~G~~~--- 111 (255)
T cd07479 46 GHGTFVAGVIASSRE-----------QCLGFAPDAEIYIFRVFTNNQVSYTSWFLDAFNYAILTKIDVLNLSIGGPD--- 111 (255)
T ss_pred CcHHHHHHHHHccCC-----------CceeECCCCEEEEEEeecCCCCchHHHHHHHHHhhhhcCCCEEEeeccCCC---
Confidence 999999999998752 237999999999999998776 67788999999999999999999999863
Q ss_pred CCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC--ccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCC
Q 036830 301 DYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT--VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSR 378 (760)
Q Consensus 301 ~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 378 (760)
+.+.++..++.++.++|++||+||||+|+...+ .+...+++|+|||++.+
T Consensus 112 -~~~~~~~~~~~~~~~~gi~vV~aaGN~g~~~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 163 (255)
T cd07479 112 -FMDKPFVDKVWELTANNIIMVSAIGNDGPLYGTLNNPADQMDVIGVGGIDFD--------------------------- 163 (255)
T ss_pred -CCCcHHHHHHHHHHHCCcEEEEEcCCCCCCcccccCcccCCCceEEeeeccC---------------------------
Confidence 344566667788899999999999999976444 35566899999985421
Q ss_pred CceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHH
Q 036830 379 SKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFR 458 (760)
Q Consensus 379 ~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 458 (760)
T Consensus 164 -------------------------------------------------------------------------------- 163 (255)
T cd07479 164 -------------------------------------------------------------------------------- 163 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCC----CCCcccCceeeCCceEEeeecCCCCCCCCCCCCCC
Q 036830 459 IINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLP----TENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEK 534 (760)
Q Consensus 459 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~----~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~ 534 (760)
+.++.|||+|++.. ..+++||||.|||.+|+++...
T Consensus 164 ---------------------------~~~~~~S~~g~~~~~~p~~~g~~~~di~apG~~i~~~~~~------------- 203 (255)
T cd07479 164 ---------------------------DNIARFSSRGMTTWELPGGYGRVKPDIVTYGSGVYGSKLK------------- 203 (255)
T ss_pred ---------------------------CccccccCCCCCcccccCCCCCcCccEEecCCCeeccccC-------------
Confidence 45789999996532 2678899999999999988654
Q ss_pred CCcceeeecccchhhhHHHHHHHHHHhCC----CCCHHHHHHHHHhccccc
Q 036830 535 PATYALRSGTSMACPHVTGAAAFIKSVRR----KWTYSMIKSALMTTATVY 581 (760)
Q Consensus 535 ~~~y~~~sGTSmAaP~VAG~aALl~q~~P----~ls~~~ik~~L~~TA~~~ 581 (760)
+.|..++|||||||||||++|||+|++| .++|++||++|++||+++
T Consensus 204 -~~~~~~sGTS~AaP~VaG~aAll~s~~p~~~~~~~p~~vk~~L~~sA~~~ 253 (255)
T cd07479 204 -GGCRALSGTSVASPVVAGAVALLLSTVPEKRDLINPASMKQALIESATRL 253 (255)
T ss_pred -CCeEEeccHHHHHHHHHHHHHHHHHhCccccCCCCHHHHHHHHHhhcccC
Confidence 6788999999999999999999999998 799999999999999975
|
SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem |
| >cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-48 Score=429.13 Aligned_cols=393 Identities=24% Similarity=0.296 Sum_probs=253.6
Q ss_pred CCCeEEEEEeCCCCCCCCCCCC-CCCCCCCCccccccccCCCCCcccCccceecccccCC----C---CCCCCCCCCCCC
Q 036830 148 ASDIVIGVIDTGIWPESPSFND-QGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSR----A---STNKDNSGSSRD 219 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~-~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~----~---~~~~~~~~~~~d 219 (760)
|+||+|||||||||+.||+|.+ ++.+++...|++....+... ....+...+.. . .....+.....|
T Consensus 3 G~GV~VaVIDtGId~~hp~F~~~dg~tRi~~~wDq~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~p~~~~~~~D 76 (455)
T cd07478 3 GKGVLVGIIDTGIDYLHPEFRNEDGTTRILYIWDQTIPGGPPP------GGYYGGGEYTEEIINAALASDNPYDIVPSRD 76 (455)
T ss_pred CCceEEEEEECCCCCCCHHHccCCCCchhHHhhhCcCCCCCCC------ccccCceEEeHHHHHHHHhcCCccccCcCCC
Confidence 9999999999999999999986 57889999999887654321 11111111111 0 000012245678
Q ss_pred CCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-----------CCHHHHHHHHHHHHhC----
Q 036830 220 PLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-----------CSGAAILQAIDDAIHD---- 284 (760)
Q Consensus 220 ~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-----------~~~~~i~~ai~~a~~~---- 284 (760)
..||||||||||||+..+ +..+.||||+|+|+.+|++...+ +...++++||+|+++.
T Consensus 77 ~~GHGThvAGIiag~~~~--------~~~~~GvAp~a~l~~vk~~~~~~~~~~~~~~~~~~~~~~i~~ai~~~~~~a~~~ 148 (455)
T cd07478 77 ENGHGTHVAGIAAGNGDN--------NPDFKGVAPEAELIVVKLKQAKKYLREFYEDVPFYQETDIMLAIKYLYDKALEL 148 (455)
T ss_pred CCCchHHHHHHHhcCCCC--------CCCccccCCCCcEEEEEeecCCCcccccccccccCcHHHHHHHHHHHHHHHHHh
Confidence 999999999999998753 23458999999999999998764 5688999999999874
Q ss_pred -CCcEEEecccCCCCCCCCCCcHHHHHHHHHHhC-CcEEEEecCCCCCCCCCccCCC-C----c--eEEeccccccccce
Q 036830 285 -GVDIISISIGLSNSEADYMNDPIAIGALHAQQR-GVVVICSAGNDGPYPFTVANTA-P----W--LFTVAASTIDRDFQ 355 (760)
Q Consensus 285 -g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~-Gi~vV~AAGN~G~~~~~~~~~~-p----~--vitVgA~~~~~~~~ 355 (760)
.+.|||||||... +.....+.++.++..+..+ |++||+||||+|....+..... + . -+.|+... ..+.
T Consensus 149 ~~p~VInlSlG~~~-g~~~g~~~l~~~i~~~~~~~gv~vV~aaGNeg~~~~h~~~~~~~~~~~~~ie~~v~~~~--~~~~ 225 (455)
T cd07478 149 NKPLVINISLGTNF-GSHDGTSLLERYIDAISRLRGIAVVVGAGNEGNTQHHHSGGIVPNGETKTVELNVGEGE--KGFN 225 (455)
T ss_pred CCCeEEEEccCcCC-CCCCCccHHHHHHHHHHhhCCeEEEEeCCCCCCcCCceeeeeccCCceEEEEEEECCCC--cceE
Confidence 3679999999875 4455667888888887766 9999999999997655543211 0 0 12222211 1111
Q ss_pred eeEEeCCCeeEeeeeeecccCCCCce------------eeeEecccccccccccccccccccCCCCCccccch-----hh
Q 036830 356 STVLLGNGKAIKGTAISLSNLSRSKT------------YPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR-----KI 418 (760)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~~~~~~~~------------~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gk-----k~ 418 (760)
-+++..... ..++...+|.++.. +...+... ..|... ..+....|. ..
T Consensus 226 ~eiW~~~~d---~~~v~i~sP~Ge~~~~i~~~~~~~~~~~~~~~~t-----------~i~v~y-~~~~~~~g~~~i~i~~ 290 (455)
T cd07478 226 LEIWGDFPD---RFSVSIISPSGESSGRINPGIGGSESYKFVFEGT-----------TVYVYY-YLPEPYTGDQLIFIRF 290 (455)
T ss_pred EEEecCCCC---EEEEEEECCCCCccCccCcCCCcceeEEEEECCe-----------EEEEEE-cCCCCCCCCeEEEEEc
Confidence 111111100 01111111111100 00000000 000000 001112222 11
Q ss_pred hhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCc----eecc-CCCCCceecccC
Q 036830 419 AVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTV----TIPR-HRPAPVVAYFSS 493 (760)
Q Consensus 419 ~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~----~~~~-~~~~~~~a~fSs 493 (760)
.....|.|.+.++........++ .|+|.-.+...+. .++......++++.... ++.. +...+.++.|||
T Consensus 291 -~~~~~GiW~i~~~~~~~~~g~~~-~Wlp~~~~~~~~t----~f~~~~~~~tit~Pa~~~~vitVga~~~~~~~~~~~Ss 364 (455)
T cd07478 291 -KNIKPGIWKIRLTGVSITDGRFD-AWLPSRGLLSENT----RFLEPDPYTTLTIPGTARSVITVGAYNQNNNSIAIFSG 364 (455)
T ss_pred -cCCCccceEEEEEeccCCCceEE-EEecCcCcCCCCC----EeecCCCCceEecCCCCCCcEEEEEEeCCCCcccCccC
Confidence 23455888888887655444344 5666554443322 23444444444444332 1111 223456999999
Q ss_pred CCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhC------CCCCH
Q 036830 494 RGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVR------RKWTY 567 (760)
Q Consensus 494 ~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~------P~ls~ 567 (760)
|||+. ++++||||+|||++|+++.+. +.|..++|||||||||||++|||+|++ |.|++
T Consensus 365 ~G~~~--~~~~kpdi~APG~~i~s~~~~--------------~~~~~~sGTS~Aap~vaG~aALl~~~~~~~~~~p~~~~ 428 (455)
T cd07478 365 RGPTR--DGRIKPDIAAPGVNILTASPG--------------GGYTTRSGTSVAAAIVAGACALLLQWGIVRGNDPYLYG 428 (455)
T ss_pred CCcCC--CCCcCceEEecCCCEEEeecC--------------CcEEeeCcHHHHHHHHHHHHHHHHHhchhccCCCCCCH
Confidence 99998 899999999999999999886 789999999999999999999999975 56799
Q ss_pred HHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCc
Q 036830 568 SMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAG 604 (760)
Q Consensus 568 ~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G 604 (760)
++||++|++||+++. +..+++++||||
T Consensus 429 ~~ik~~L~~tA~~~~----------~~~~pn~~~GyG 455 (455)
T cd07478 429 EKIKTYLIRGARRRP----------GDEYPNPEWGYG 455 (455)
T ss_pred HHHHHHHHHhCccCC----------CCCCCCCCCCCC
Confidence 999999999999763 245688999998
|
GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure |
| >cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-47 Score=413.93 Aligned_cols=310 Identities=30% Similarity=0.384 Sum_probs=234.1
Q ss_pred ccccC---CCCeEEEEEeCCCCCCCCCCCCCCCCCCCC-----ccccccccCCCCCcccCccceecccccCCCCCCCCCC
Q 036830 143 KYHKA---ASDIVIGVIDTGIWPESPSFNDQGMGEIPS-----RWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNS 214 (760)
Q Consensus 143 ~~~~~---G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~-----~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~ 214 (760)
+|+.+ |+||+|||||||||++||+|.+....+... .+...+..+ ...+++.+++.+++|.++....
T Consensus 2 ~w~~~~~~G~gv~VaViDtGv~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--- 75 (346)
T cd07475 2 LWDKGGYKGEGMVVAVIDSGVDPTHDAFRLDDDSKAKYSEEFEAKKKKAGIG---YGKYYNEKVPFAYNYADNNDDI--- 75 (346)
T ss_pred hhhhcCCCCCCcEEEEEeCCCCCCChhHccCCCcccccchhhhhhhhcccCC---CCcccccCCCeeEcCCCCCCcc---
Confidence 56655 999999999999999999998654332111 111111111 1224567888888888664321
Q ss_pred CCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccC--CC-CCHHHHHHHHHHHHhCCCcEEEe
Q 036830 215 GSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKE--GG-CSGAAILQAIDDAIHDGVDIISI 291 (760)
Q Consensus 215 ~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~--~g-~~~~~i~~ai~~a~~~g~dVIN~ 291 (760)
....|..+|||||||||+|...+.. .+..+.||||+|+|+.+|+++. .+ .....+++|++++++.|++||||
T Consensus 76 ~~~~~~~~HGT~vagiiag~~~~~~-----~~~~~~GiAp~a~l~~~~v~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~ 150 (346)
T cd07475 76 LDEDDGSSHGMHVAGIVAGNGDEED-----NGEGIKGVAPEAQLLAMKVFSNPEGGSTYDDAYAKAIEDAVKLGADVINM 150 (346)
T ss_pred CCCCCCCCcHHHHHHHHhcCCCccc-----cCCceEEeCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 2245789999999999999875421 1345689999999999999973 33 78889999999999999999999
Q ss_pred cccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCc----------------cCCCCceEEeccccccccce
Q 036830 292 SIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTV----------------ANTAPWLFTVAASTIDRDFQ 355 (760)
Q Consensus 292 SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~----------------~~~~p~vitVgA~~~~~~~~ 355 (760)
|||... ........+..++.++.++|++||+||||+|...... +...+++|+||+++..
T Consensus 151 S~G~~~-~~~~~~~~~~~~~~~a~~~giliv~aAGN~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~Vga~~~~---- 225 (346)
T cd07475 151 SLGSTA-GFVDLDDPEQQAIKRAREAGVVVVVAAGNDGNSGSGTSKPLATNNPDTGTVGSPATADDVLTVASANKK---- 225 (346)
T ss_pred CCCcCC-CCCCCCCHHHHHHHHHhhCCeEEEEeCCCCCccCccccCcccccCCCcceecCCccCCCceEEeecccc----
Confidence 999985 2224567778888999999999999999998544321 2234566777664310
Q ss_pred eeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCC
Q 036830 356 STVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDD 435 (760)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~ 435 (760)
T Consensus 226 -------------------------------------------------------------------------------- 225 (346)
T cd07475 226 -------------------------------------------------------------------------------- 225 (346)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceE
Q 036830 436 EKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAV 515 (760)
Q Consensus 436 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I 515 (760)
......+.++.||+|||+. ..++||||+|||.+|
T Consensus 226 --------------------------------------------~~~~~~~~~~~~S~~G~~~--~~~~~pdi~apG~~i 259 (346)
T cd07475 226 --------------------------------------------VPNPNGGQMSGFSSWGPTP--DLDLKPDITAPGGNI 259 (346)
T ss_pred --------------------------------------------cCCCCCCccCCCcCCCCCc--ccCcCCeEEeCCCCe
Confidence 0012236688999999998 889999999999999
Q ss_pred EeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHh----CCCCCHHH----HHHHHHhcccccCCCCCC
Q 036830 516 LAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSV----RRKWTYSM----IKSALMTTATVYDNTGTP 587 (760)
Q Consensus 516 ~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~ls~~~----ik~~L~~TA~~~~~~g~p 587 (760)
+++... +.|..++|||||||+|||++|||+|+ +|.|++.+ ||++|++||.+...
T Consensus 260 ~s~~~~--------------~~~~~~~GTS~AaP~VaG~aALl~~~~~~~~p~l~~~~~~~~ik~~l~~ta~~~~~---- 321 (346)
T cd07475 260 YSTVND--------------NTYGYMSGTSMASPHVAGASALVKQRLKEKYPKLSGEELVDLVKNLLMNTATPPLD---- 321 (346)
T ss_pred EEecCC--------------CceEeeCcHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHhcCCcccc----
Confidence 999765 67899999999999999999999998 78999876 78899999984211
Q ss_pred cCCCCCCCCCCCCCCCcccCccccCC
Q 036830 588 LTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 588 ~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
.......+.+..+|+|+||+.+||+
T Consensus 322 -~~~~~~~~~~~~~G~G~vn~~~Av~ 346 (346)
T cd07475 322 -SEDTKTYYSPRRQGAGLIDVAKAIA 346 (346)
T ss_pred -cCCCCccCCccccCcchhcHHHhhC
Confidence 1112456678889999999999985
|
Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr |
| >cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=404.49 Aligned_cols=292 Identities=30% Similarity=0.371 Sum_probs=228.8
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCC----CCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS----TNKDN 213 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~----~~~~~ 213 (760)
++.+|+.+ |+||+|||||+|||++||+|.+.-.. +.++.+.+++..+. ....+
T Consensus 2 v~~~~~~g~tG~gv~VaViDsGid~~hp~l~~~~~~---------------------~~~~~~~~d~~~~~~~~~~~~~~ 60 (312)
T cd07489 2 VDKLHAEGITGKGVKVAVVDTGIDYTHPALGGCFGP---------------------GCKVAGGYDFVGDDYDGTNPPVP 60 (312)
T ss_pred hhhHHhCCCCCCCCEEEEEECCCCCCChhhhcCCCC---------------------CceeccccccCCcccccccCCCC
Confidence 45789988 99999999999999999999752110 01222223332111 00112
Q ss_pred CCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEec
Q 036830 214 SGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISIS 292 (760)
Q Consensus 214 ~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~S 292 (760)
...+.|..+|||||||||+|...+ ..+.||||+|+|+.+|++...+ ...+.++++++++++++++|||||
T Consensus 61 ~~~~~d~~gHGT~vAgiia~~~~~---------~~~~GiAp~a~i~~~~v~~~~~~~~~~~~~~ai~~a~~~~~~iIn~S 131 (312)
T cd07489 61 DDDPMDCQGHGTHVAGIIAANPNA---------YGFTGVAPEATLGAYRVFGCSGSTTEDTIIAAFLRAYEDGADVITAS 131 (312)
T ss_pred CCCCCCCCCcHHHHHHHHhcCCCC---------CceEEECCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcCCCEEEeC
Confidence 345667799999999999998743 2347999999999999998666 778889999999999999999999
Q ss_pred ccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC---CccCCCCceEEeccccccccceeeEEeCCCeeEeee
Q 036830 293 IGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF---TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGT 369 (760)
Q Consensus 293 lG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~---~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~ 369 (760)
||... .+..+.+...+.++.++|+++|+||||+|.... ..+...+++|+||+++
T Consensus 132 ~g~~~---~~~~~~~~~~~~~~~~~gv~iv~aaGN~g~~~~~~~~~p~~~~~vi~Vga~~-------------------- 188 (312)
T cd07489 132 LGGPS---GWSEDPWAVVASRIVDAGVVVTIAAGNDGERGPFYASSPASGRGVIAVASVD-------------------- 188 (312)
T ss_pred CCcCC---CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccCCccCCCeEEEEEec--------------------
Confidence 99874 344577778888999999999999999986532 3345668888888632
Q ss_pred eeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceE
Q 036830 370 AISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYA 449 (760)
Q Consensus 370 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~ 449 (760)
T Consensus 189 -------------------------------------------------------------------------------- 188 (312)
T cd07489 189 -------------------------------------------------------------------------------- 188 (312)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCC
Q 036830 450 EVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGI 529 (760)
Q Consensus 450 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~ 529 (760)
+.||++||+. +...||||+|||++++++++...
T Consensus 189 ---------------------------------------~~~s~~g~~~--~~~~kpdv~ApG~~i~~~~~~~~------ 221 (312)
T cd07489 189 ---------------------------------------SYFSSWGPTN--ELYLKPDVAAPGGNILSTYPLAG------ 221 (312)
T ss_pred ---------------------------------------CCccCCCCCC--CCCcCccEEcCCCCEEEeeeCCC------
Confidence 4679999987 78899999999999999987632
Q ss_pred CCCCCCCcceeeecccchhhhHHHHHHHHHHhC-CCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCc
Q 036830 530 PAGEKPATYALRSGTSMACPHVTGAAAFIKSVR-RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINP 608 (760)
Q Consensus 530 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~ 608 (760)
+.|..++|||||||+|||++||++|++ |.+++.+||++|++||.++...+..-. .....+...+|||+||+
T Consensus 222 ------~~~~~~~GTS~Aap~vaG~~Al~~~~~~~~~~~~~v~~~l~~ta~~~~~~~~~~~--~~~~~~~~~~G~G~vn~ 293 (312)
T cd07489 222 ------GGYAVLSGTSMATPYVAGAAALLIQARHGKLSPAELRDLLASTAKPLPWSDGTSA--LPDLAPVAQQGAGLVNA 293 (312)
T ss_pred ------CceEeeccHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhCccccccCCCcc--ccCCCCHhhcCcceeeH
Confidence 469999999999999999999999999 999999999999999998743221100 01236778999999999
Q ss_pred cccCCCceeee
Q 036830 609 LKALNPGLVFK 619 (760)
Q Consensus 609 ~~Al~~~l~~~ 619 (760)
++|++..-..+
T Consensus 294 ~~a~~~~~~~~ 304 (312)
T cd07489 294 YKALYATTTLS 304 (312)
T ss_pred HHHhcCCcccc
Confidence 99999654443
|
gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-46 Score=388.39 Aligned_cols=245 Identities=27% Similarity=0.345 Sum_probs=201.7
Q ss_pred ccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCC
Q 036830 143 KYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDP 220 (760)
Q Consensus 143 ~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~ 220 (760)
+|..+ |+||+|||||+|||++||+|.+....+.. .+.. ......|.
T Consensus 2 lw~~g~~g~gV~VaViDsGid~~hp~l~~~~~~~~~--------------------------~~~~------~~~~~~~~ 49 (267)
T cd07476 2 LFAFGGGDPRITIAILDGPVDRTHPCFRGANLTPLF--------------------------TYAA------AACQDGGA 49 (267)
T ss_pred ceeccCCCCCeEEEEeCCCcCCCChhhCCCcccccc--------------------------Cccc------cCCCCCCC
Confidence 68887 89999999999999999999853221100 0000 01344567
Q ss_pred CCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC--CCHHHHHHHHHHHHhCCCcEEEecccCCCC
Q 036830 221 LGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG--CSGAAILQAIDDAIHDGVDIISISIGLSNS 298 (760)
Q Consensus 221 ~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~ 298 (760)
.+||||||||++|+.. ..+.||||+|+|+.+|++...+ ++..++++||+||+++|++|||||||...
T Consensus 50 ~gHGT~VAgii~g~~~----------~~~~GvAp~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~- 118 (267)
T cd07476 50 SAHGTHVASLIFGQPC----------SSVEGIAPLCRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIINISGGRLT- 118 (267)
T ss_pred CCcHHHHHHHHhcCCC----------CCceeECcCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEEecCCcCC-
Confidence 8999999999998752 2357999999999999997654 45789999999999999999999999864
Q ss_pred CCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCC
Q 036830 299 EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSR 378 (760)
Q Consensus 299 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 378 (760)
........+..+++.+.++|++||+||||+|.....+++..|++|+|||++..
T Consensus 119 ~~~~~~~~l~~a~~~a~~~gvlvv~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------------------- 171 (267)
T cd07476 119 QTGEADPILANAVAMCQQNNVLIVAAAGNEGCACLHVPAALPSVLAVGAMDDD--------------------------- 171 (267)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCceEEEEeecCC---------------------------
Confidence 22344567788889999999999999999998777788888999999985421
Q ss_pred CceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHH
Q 036830 379 SKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFR 458 (760)
Q Consensus 379 ~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 458 (760)
T Consensus 172 -------------------------------------------------------------------------------- 171 (267)
T cd07476 172 -------------------------------------------------------------------------------- 171 (267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcc
Q 036830 459 IINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATY 538 (760)
Q Consensus 459 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y 538 (760)
+.++.||++|+.. .||||+|||.+|+++.+. +.|
T Consensus 172 ---------------------------~~~~~~s~~g~~~-----~~~~l~ApG~~i~~~~~~--------------~~~ 205 (267)
T cd07476 172 ---------------------------GLPLKFSNWGADY-----RKKGILAPGENILGAALG--------------GEV 205 (267)
T ss_pred ---------------------------CCeeeecCCCCCC-----CCceEEecCCCceeecCC--------------CCe
Confidence 3457899999864 378999999999999876 679
Q ss_pred eeeecccchhhhHHHHHHHHHHhCCC----CCHHHHHHHHHhcccccCC
Q 036830 539 ALRSGTSMACPHVTGAAAFIKSVRRK----WTYSMIKSALMTTATVYDN 583 (760)
Q Consensus 539 ~~~sGTSmAaP~VAG~aALl~q~~P~----ls~~~ik~~L~~TA~~~~~ 583 (760)
..++|||||||||||++|||+|.+|. ++|++||++|++||+++..
T Consensus 206 ~~~sGTS~AaP~vaG~aALl~s~~~~~~~~~~~~~vk~~L~~tA~~~~~ 254 (267)
T cd07476 206 VRRSGTSFAAAIVAGIAALLLSLQLRRGAPPDPLAVRRALLETATPCDP 254 (267)
T ss_pred EEeccHHHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHHhCccCCC
Confidence 99999999999999999999999887 8999999999999998743
|
Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). |
| >cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-46 Score=381.55 Aligned_cols=234 Identities=29% Similarity=0.356 Sum_probs=193.5
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhh
Q 036830 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAST 230 (760)
Q Consensus 151 v~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi 230 (760)
|+|||||||||++||+|.+... ..+++.. ....|..+||||||||
T Consensus 1 V~VavIDsGvd~~hp~l~~~~~---------------------------~~~~~~~--------~~~~~~~~HGT~vAgi 45 (239)
T cd05561 1 VRVGMIDTGIDTAHPALSAVVI---------------------------ARLFFAG--------PGAPAPSAHGTAVASL 45 (239)
T ss_pred CEEEEEeCCCCCCCcccccCcc---------------------------ccccCCC--------CCCCCCCCCHHHHHHH
Confidence 6899999999999999964211 1111110 1345678999999999
Q ss_pred cccccccccccccccCCcccccCCCCeEEEEEeccCCC----CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcH
Q 036830 231 AAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG----CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDP 306 (760)
Q Consensus 231 ~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g----~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~ 306 (760)
|+|...+. .||||+|+|+.+|++...+ ++..++++||+|+++.|++|||||||... ...
T Consensus 46 ia~~~~~~-----------~Gvap~a~i~~~~v~~~~~~~~~~~~~~i~~ai~~a~~~g~~VIn~S~g~~~------~~~ 108 (239)
T cd05561 46 LAGAGAQR-----------PGLLPGADLYGADVFGRAGGGEGASALALARALDWLAEQGVRVVNISLAGPP------NAL 108 (239)
T ss_pred HhCCCCCC-----------cccCCCCEEEEEEEecCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC------CHH
Confidence 99986321 5999999999999998642 67789999999999999999999999762 356
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCC-CCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeE
Q 036830 307 IAIGALHAQQRGVVVICSAGNDGPYP-FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLA 385 (760)
Q Consensus 307 ~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~ 385 (760)
+..++.++.++|++||+||||+|... ..+++..+++|+|++++.+
T Consensus 109 l~~ai~~a~~~gilvv~AaGN~g~~~~~~~Pa~~~~vi~V~a~~~~---------------------------------- 154 (239)
T cd05561 109 LAAAVAAAAARGMVLVAAAGNDGPAAPPLYPAAYPGVIAVTAVDAR---------------------------------- 154 (239)
T ss_pred HHHHHHHHHHCCCEEEEecCCCCCCCCccCcccCCCceEEEeecCC----------------------------------
Confidence 77788899999999999999999753 3566777899999975422
Q ss_pred ecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhc
Q 036830 386 YGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINS 465 (760)
Q Consensus 386 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 465 (760)
T Consensus 155 -------------------------------------------------------------------------------- 154 (239)
T cd05561 155 -------------------------------------------------------------------------------- 154 (239)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeeccc
Q 036830 466 NKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTS 545 (760)
Q Consensus 466 ~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTS 545 (760)
+.++.||++|+.. ||.|||++|+++.+. +.|..++|||
T Consensus 155 --------------------~~~~~~s~~g~~~--------di~ApG~~i~~~~~~--------------~~~~~~sGTS 192 (239)
T cd05561 155 --------------------GRLYREANRGAHV--------DFAAPGVDVWVAAPG--------------GGYRYVSGTS 192 (239)
T ss_pred --------------------CCccccCCCCCcc--------eEEccccceecccCC--------------CCEEEeCCHH
Confidence 4467899999976 999999999997655 6799999999
Q ss_pred chhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCc
Q 036830 546 MACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAG 604 (760)
Q Consensus 546 mAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G 604 (760)
||||||||++|||+|++| ++++|||++|++||+++. .+.++..||||
T Consensus 193 ~AaP~vaG~aAll~~~~p-~~~~~i~~~L~~ta~~~g-----------~~~~d~~~G~G 239 (239)
T cd05561 193 FAAPFVTAALALLLQASP-LAPDDARARLAATAKDLG-----------PPGRDPVFGYG 239 (239)
T ss_pred HHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhhccC-----------CCCcCCCcCCC
Confidence 999999999999999999 999999999999999763 34577889998
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-45 Score=389.94 Aligned_cols=282 Identities=39% Similarity=0.577 Sum_probs=217.1
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCC-C--------CCCCCC
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNK-D--------NSGSSR 218 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~-~--------~~~~~~ 218 (760)
|+||+|||||+|||++||+|.+... .+.++...++|....... . ......
T Consensus 1 G~gV~VaViDsGi~~~hp~l~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (295)
T cd07474 1 GKGVKVAVIDTGIDYTHPDLGGPGF---------------------PNDKVKGGYDFVDDDYDPMDTRPYPSPLGDASAG 59 (295)
T ss_pred CCCCEEEEEECCcCCCCcccccCCC---------------------CCCceeeeeECccCCCCcccccccccccccCCCC
Confidence 8999999999999999999974211 123333333333221110 0 112245
Q ss_pred CCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCC
Q 036830 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSN 297 (760)
Q Consensus 219 d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~ 297 (760)
|..+|||||||+|+|...+ ...+.||||+|+|+.+|++...+ +...++++||+|+++.+++|||||||...
T Consensus 60 ~~~~HGT~vAgiiag~~~n--------~~~~~Giap~a~i~~~~~~~~~~~~~~~~~~~ai~~a~~~~~~Iin~S~g~~~ 131 (295)
T cd07474 60 DATGHGTHVAGIIAGNGVN--------VGTIKGVAPKADLYAYKVLGPGGSGTTDVIIAAIEQAVDDGMDVINLSLGSSV 131 (295)
T ss_pred CCCCcHHHHHHHHhcCCCc--------cCceEeECCCCeEEEEEeecCCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 6899999999999988643 23457999999999999998555 88899999999999999999999999874
Q ss_pred CCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCc--cCCCCceEEeccccccccceeeEEeCCCeeEeeeeeeccc
Q 036830 298 SEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTV--ANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375 (760)
Q Consensus 298 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~--~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 375 (760)
....+.+..+++++.++|+++|+||||+|...... +...+++|+||++....
T Consensus 132 ---~~~~~~~~~~~~~~~~~gil~V~aAGN~g~~~~~~~~pa~~~~~i~Vga~~~~~----------------------- 185 (295)
T cd07474 132 ---NGPDDPDAIAINNAVKAGVVVVAAAGNSGPAPYTIGSPATAPSAITVGASTVAD----------------------- 185 (295)
T ss_pred ---CCCCCHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCCcCCCeEEEeeeeccC-----------------------
Confidence 22456778888999999999999999998765544 45678999999864210
Q ss_pred CCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhh
Q 036830 376 LSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVA 455 (760)
Q Consensus 376 ~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~ 455 (760)
T Consensus 186 -------------------------------------------------------------------------------- 185 (295)
T cd07474 186 -------------------------------------------------------------------------------- 185 (295)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCC-CCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCC
Q 036830 456 GFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSR-GPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEK 534 (760)
Q Consensus 456 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~-Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~ 534 (760)
.........|+++ |+.. ...+||||+|||.+|++++....
T Consensus 186 --------------------------~~~~~~~~~~~s~~~~~~--~~~~kpdv~apG~~i~~~~~~~~----------- 226 (295)
T cd07474 186 --------------------------VAEADTVGPSSSRGPPTS--DSAIKPDIVAPGVDIMSTAPGSG----------- 226 (295)
T ss_pred --------------------------cCCCCceeccCCCCCCCC--CCCcCCCEECCcCceEeeccCCC-----------
Confidence 0011233445555 4544 78899999999999999987632
Q ss_pred CCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCcccc
Q 036830 535 PATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKA 611 (760)
Q Consensus 535 ~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~A 611 (760)
..|..++|||||||+|||++|||+|++|.|++++||++|++||++....+ ....++..+|+|+||+.+|
T Consensus 227 -~~~~~~~GTS~AaP~vaG~aAll~~~~p~l~~~~v~~~L~~tA~~~~~~~-------~~~~~~~~~G~G~l~~~~A 295 (295)
T cd07474 227 -TGYARMSGTSMAAPHVAGAAALLKQAHPDWSPAQIKAALMNTAKPLYDSD-------GVVYPVSRQGAGRVDALRA 295 (295)
T ss_pred -CceEEeccHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCcccccCC-------CCcCChhccCcceeccccC
Confidence 67899999999999999999999999999999999999999999764432 2233567899999999987
|
The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=390.22 Aligned_cols=266 Identities=25% Similarity=0.324 Sum_probs=191.3
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCC---CCCCCcccccccc---------CCCCCcccCccceecccccCCCC--CCCCCC
Q 036830 149 SDIVIGVIDTGIWPESPSFNDQGM---GEIPSRWKGVCME---------SPDFKKSHCNRKLIGARHCSRAS--TNKDNS 214 (760)
Q Consensus 149 ~Gv~VgVIDtGid~~Hp~f~~~~~---~~~~~~~~g~~~~---------g~~f~~~~~n~ki~g~~~~~~~~--~~~~~~ 214 (760)
|+|+|||||||||++||+|++... ..++ .+|.... |.+|......+++.+...+.... ...++.
T Consensus 1 ~~V~VaviDtGid~~Hpdl~~~~~~n~~e~~--~~~~d~d~ng~~dd~~g~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~ 78 (291)
T cd07483 1 KTVIVAVLDSGVDIDHEDLKGKLWINKKEIP--GNGIDDDNNGYIDDVNGWNFLGQYDPRRIVGDDPYDLTEKGYGNNDV 78 (291)
T ss_pred CceEEEEEeCCCCCCChhhhhhhhcCCcccC--CCCccCCCCCccccccCeeccCCcccccccccCcccccccccccccc
Confidence 689999999999999999986311 1111 1111112 22232222222222222111110 001123
Q ss_pred CCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEeccc
Q 036830 215 GSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIG 294 (760)
Q Consensus 215 ~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG 294 (760)
..+.+..+|||||||||+|...++. .+.||||+|+|+.+|++........++++||+||++.|++|||||||
T Consensus 79 ~~~~~~~gHGT~VAGiIaa~~~n~~--------g~~GvAp~a~i~~~k~~~~g~~~~~~i~~Ai~~a~~~g~~IiN~S~G 150 (291)
T cd07483 79 NGPISDADHGTHVAGIIAAVRDNGI--------GIDGVADNVKIMPLRIVPNGDERDKDIANAIRYAVDNGAKVINMSFG 150 (291)
T ss_pred CCCCCCCCcHHHHHHHHhCcCCCCC--------ceEEECCCCEEEEEEEecCCCcCHHHHHHHHHHHHHCCCcEEEeCCC
Confidence 4455789999999999999864321 24799999999999998654477889999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC---cc--------CCCCceEEeccccccccceeeEEeCCC
Q 036830 295 LSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT---VA--------NTAPWLFTVAASTIDRDFQSTVLLGNG 363 (760)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~---~~--------~~~p~vitVgA~~~~~~~~~~~~~~~~ 363 (760)
... ....+.+..+++.+.++|+++|+||||+|..... ++ ...+++|+|||++...
T Consensus 151 ~~~---~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~p~~~~~~~~~~~~~vi~Vga~~~~~----------- 216 (291)
T cd07483 151 KSF---SPNKEWVDDAIKYAESKGVLIVHAAGNDGLDLDITPNFPNDYDKNGGEPANNFITVGASSKKY----------- 216 (291)
T ss_pred CCC---CCccHHHHHHHHHHHhCCeEEEEeCCCCCCCCCcCcCCCCcccccCccccCCeeEEeeccccC-----------
Confidence 763 1233456777788999999999999999854321 11 1235677777653220
Q ss_pred eeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCC
Q 036830 364 KAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTER 443 (760)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~ 443 (760)
T Consensus 217 -------------------------------------------------------------------------------- 216 (291)
T cd07483 217 -------------------------------------------------------------------------------- 216 (291)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCC
Q 036830 444 GILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRP 523 (760)
Q Consensus 444 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~ 523 (760)
....++.||++|+. +|||.|||.+|+++.+.
T Consensus 217 ----------------------------------------~~~~~~~~Sn~G~~-------~vdi~APG~~i~s~~~~-- 247 (291)
T cd07483 217 ----------------------------------------ENNLVANFSNYGKK-------NVDVFAPGERIYSTTPD-- 247 (291)
T ss_pred ----------------------------------------CcccccccCCCCCC-------ceEEEeCCCCeEeccCc--
Confidence 11346889999974 35999999999999765
Q ss_pred CCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 524 DRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 524 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||+
T Consensus 248 ------------~~~~~~sGTS~AaP~vaG~aAl~~s~~p~lt~~~v~~~L~~ta~ 291 (291)
T cd07483 248 ------------NEYETDSGTSMAAPVVSGVAALIWSYYPNLTAKEVKQIILESGV 291 (291)
T ss_pred ------------CCeEeeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCC
Confidence 78999999999999999999999999999999999999999984
|
Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a cat |
| >cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=377.48 Aligned_cols=247 Identities=31% Similarity=0.382 Sum_probs=197.1
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|||||+||+++||+|.+. |.+.... .+...+.+.+.. .....+.|..+|||||
T Consensus 1 G~GV~VaViDsGi~~~hp~l~~~--------~~~~~~~-----------~~~~~~~~~d~~---~~~~~~~d~~~HGT~v 58 (264)
T cd07481 1 GTGIVVANIDTGVDWTHPALKNK--------YRGWGGG-----------SADHDYNWFDPV---GNTPLPYDDNGHGTHT 58 (264)
T ss_pred CCCcEEEEEeCCCCCCChhHhhc--------ccccCCC-----------CcccccccccCC---CCCCCCCCCCCchhhh
Confidence 89999999999999999999852 1111000 000001111110 1124556788999999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh------------CCCcEEEecccC
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH------------DGVDIISISIGL 295 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~------------~g~dVIN~SlG~ 295 (760)
||||+|.... +...||||+|+|+.+|++...++...+++++++++++ .+++|||||||.
T Consensus 59 agii~g~~~~---------~~~~GvAp~a~i~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~Iin~S~G~ 129 (264)
T cd07481 59 MGTMVGNDGD---------GQQIGVAPGARWIACRALDRNGGNDADYLRCAQWMLAPTDSAGNPADPDLAPDVINNSWGG 129 (264)
T ss_pred hhheeecCCC---------CCceEECCCCeEEEEEeecCCCCcHHHHHHHHHHHHhcccccccccccccCCeEEEeCCCc
Confidence 9999987632 2237999999999999998877888899999999975 789999999998
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC---ccCCCCceEEeccccccccceeeEEeCCCeeEeeeeee
Q 036830 296 SNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT---VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372 (760)
Q Consensus 296 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~---~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 372 (760)
.. .....+..++..+.++|++||+||||+|..... .+...|++|+||+++.+
T Consensus 130 ~~----~~~~~~~~~~~~~~~~gvlvV~aaGN~~~~~~~~~~~pa~~~~vi~Vga~~~~--------------------- 184 (264)
T cd07481 130 PS----GDNEWLQPAVAAWRAAGIFPVFAAGNDGPRCSTLNAPPANYPESFAVGATDRN--------------------- 184 (264)
T ss_pred CC----CCchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCcCCCCcCCceEEEEecCCC---------------------
Confidence 84 134556667788889999999999999865443 45677899999985432
Q ss_pred cccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEec
Q 036830 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452 (760)
Q Consensus 373 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~ 452 (760)
T Consensus 185 -------------------------------------------------------------------------------- 184 (264)
T cd07481 185 -------------------------------------------------------------------------------- 184 (264)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCC
Q 036830 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~ 532 (760)
+.++.||++||.. .+++||||+|||.+|+++++.
T Consensus 185 ---------------------------------~~~~~~S~~g~~~--~~~~~~dv~ApG~~i~s~~~~----------- 218 (264)
T cd07481 185 ---------------------------------DVLADFSSRGPST--YGRIKPDISAPGVNIRSAVPG----------- 218 (264)
T ss_pred ---------------------------------CCCccccCCCCCC--CCCcCceEEECCCCeEEecCC-----------
Confidence 4568999999987 789999999999999999876
Q ss_pred CCCCcceeeecccchhhhHHHHHHHHHHhCCC--CCHHHHHHHHHhccc
Q 036830 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRK--WTYSMIKSALMTTAT 579 (760)
Q Consensus 533 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~--ls~~~ik~~L~~TA~ 579 (760)
+.|..++|||||||+|||++|||+|++|+ ++++|||.+|++||+
T Consensus 219 ---~~~~~~~GTS~AaP~vaG~aAll~~~~p~~~l~~~~v~~~L~~tA~ 264 (264)
T cd07481 219 ---GGYGSSSGTSMAAPHVAGVAALLWSANPSLIGDVDATEAILTETAR 264 (264)
T ss_pred ---CceEeeCcHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHhcC
Confidence 67899999999999999999999999999 999999999999985
|
Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. |
| >cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=377.71 Aligned_cols=245 Identities=28% Similarity=0.346 Sum_probs=197.3
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhh
Q 036830 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAS 229 (760)
Q Consensus 150 Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAG 229 (760)
||+||||||||+++||+|..... ..+.++.+.++|.++.. ....|..+|||||||
T Consensus 1 Gv~VaviDsGi~~~h~~~~~~~~--------------------~~~~~i~~~~~~~~~~~-----~~~~~~~~HGT~vag 55 (261)
T cd07493 1 GITIAVIDAGFPKVHEAFAFKHL--------------------FKNLRILGEYDFVDNSN-----NTNYTDDDHGTAVLS 55 (261)
T ss_pred CCEEEEEccCCCccCcchhhhcc--------------------ccCCceeeeecCccCCC-----CCCCCCCCchhhhhe
Confidence 79999999999999999942100 12345666666765421 113678899999999
Q ss_pred hcccccccccccccccCCcccccCCCCeEEEEEeccCCC---CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCC-----
Q 036830 230 TAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG---CSGAAILQAIDDAIHDGVDIISISIGLSNSEAD----- 301 (760)
Q Consensus 230 i~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~----- 301 (760)
||+|+.. +.+.||||+|+|+.+|+..... .....++.|++|+.+.+++|||||||.......
T Consensus 56 iia~~~~----------~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~~~ai~~a~~~~v~VIn~S~G~~~~~~~~~~~~ 125 (261)
T cd07493 56 TMAGYTP----------GVMVGTAPNASYYLARTEDVASETPVEEDNWVAAAEWADSLGVDIISSSLGYTTFDNPTYSYT 125 (261)
T ss_pred eeeeCCC----------CCEEEeCCCCEEEEEEecccCCcccccHHHHHHHHHHHHHcCCCEEEeCCCcCCCCCcccccc
Confidence 9999752 3357999999999999876433 456678999999999999999999998741110
Q ss_pred -----CCCcHHHHHHHHHHhCCcEEEEecCCCCCC---CCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeec
Q 036830 302 -----YMNDPIAIGALHAQQRGVVVICSAGNDGPY---PFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISL 373 (760)
Q Consensus 302 -----~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~---~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~ 373 (760)
.....+..+++.+.++|+++|+||||+|.. ....+...+++|+|||.+.+
T Consensus 126 ~~~~~~~~~~l~~a~~~a~~~gilvv~AAGN~g~~~~~~~~~Pa~~~~vi~Vga~~~~---------------------- 183 (261)
T cd07493 126 YADMDGKTSFISRAANIAASKGMLVVNSAGNEGSTQWKGIGAPADAENVLSVGAVDAN---------------------- 183 (261)
T ss_pred cccccccchHHHHHHHHHHhCCeEEEEECCCCCCCCCCcccCcccCCceEEEEEeccC----------------------
Confidence 112456778889999999999999999976 34566778999999985421
Q ss_pred ccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEech
Q 036830 374 SNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGK 453 (760)
Q Consensus 374 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~ 453 (760)
T Consensus 184 -------------------------------------------------------------------------------- 183 (261)
T cd07493 184 -------------------------------------------------------------------------------- 183 (261)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCC
Q 036830 454 VAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE 533 (760)
Q Consensus 454 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~ 533 (760)
+.++.||++||+. ++++||||+|||.++++....
T Consensus 184 --------------------------------~~~~~~S~~G~~~--~~~~~pdi~a~G~~~~~~~~~------------ 217 (261)
T cd07493 184 --------------------------------GNKASFSSIGPTA--DGRLKPDVMALGTGIYVINGD------------ 217 (261)
T ss_pred --------------------------------CCCCccCCcCCCC--CCCcCCceEecCCCeEEEcCC------------
Confidence 3567899999987 889999999999999986543
Q ss_pred CCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 534 KPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 534 ~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
+.|..++|||||||+|||++|||+|++|+|++.|||++|++||+
T Consensus 218 --~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~i~~~l~~tA~ 261 (261)
T cd07493 218 --GNITYANGTSFSCPLIAGLIACLWQAHPNWTNLQIKEAILKSAS 261 (261)
T ss_pred --CcEEeeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 67899999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-45 Score=376.21 Aligned_cols=333 Identities=23% Similarity=0.357 Sum_probs=263.3
Q ss_pred CCCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccc------ccc------------ceEEEec---cc
Q 036830 28 NEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEES------ERL------------SLIHHYK---HA 86 (760)
Q Consensus 28 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~------------~~~~~y~---~~ 86 (760)
...+.+|||.|+.... +...+.|.++++........ .-. .+.+.|. .+
T Consensus 77 ~~~~~~YiV~f~~~~~-----------q~~~s~~~~~~~~~h~~s~~~~s~~~~f~~~d~~~s~~~~~~i~~~f~i~~~~ 145 (501)
T KOG1153|consen 77 EALPSRYIVVFKPDAS-----------QQKISAHNRWVQQSHEVSSGKLSSEDAFYVKDTSDSKSTFGGIKNVFDIGGRV 145 (501)
T ss_pred cccccceEEEeCCCcc-----------HHHHHhhhHHHHHHhhhhhccccccceeEeeccccchhhhcccccccccccch
Confidence 3466899999994433 35677888887766532211 101 1334444 37
Q ss_pred eeeEEEEeCHHHHHHhcCCCCeEEEEeCccccccc-----CCCccccccccCCCc-----ccccccccccC-CCCeEEEE
Q 036830 87 FKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHT-----TRSWDFLAAAAKPAK-----NTWFNHKYHKA-ASDIVIGV 155 (760)
Q Consensus 87 ~~g~s~~l~~~~i~~L~~~p~V~~V~~~~~~~~~~-----~~s~~~~g~~~~~~~-----~~~~~~~~~~~-G~Gv~VgV 155 (760)
|+|..-..+.+.+..+++.|-++.++++..++... .+....|++.+..+. ..|..++|+.. |+||...|
T Consensus 146 ~~~y~~~ft~~~v~~i~~~p~~~~ve~~~~v~~~~~~~i~~Q~~APwgLaRvsh~~~~~y~~~~~Y~Y~~~aG~gvtaYv 225 (501)
T KOG1153|consen 146 FRGYTGYFTGESVCSIRSDPLIKAVEKDSVVEVDKISTIMLQNNAPWGLARVSHREKLKYDSWGNYVYEIDAGKGVTAYV 225 (501)
T ss_pred hhccccccccceeeeeccCcceeecccccccccccccceecccCCchhhhhhcccccccccchheEEeecccCCCeEEEE
Confidence 88888899999999999999999999998776543 222233455444332 25677888888 99999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhccccc
Q 036830 156 IDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNY 235 (760)
Q Consensus 156 IDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~ 235 (760)
+||||+.+||+|.+. ..| |..+. .-....|++||||||||+|++..
T Consensus 226 ~DTGVni~H~dFegR------a~w------Ga~i~----------------------~~~~~~D~nGHGTH~AG~I~sKt 271 (501)
T KOG1153|consen 226 LDTGVNIEHPDFEGR------AIW------GATIP----------------------PKDGDEDCNGHGTHVAGLIGSKT 271 (501)
T ss_pred ecccccccccccccc------eec------ccccC----------------------CCCcccccCCCcceeeeeeeccc
Confidence 999999999999863 233 21111 01345689999999999999986
Q ss_pred ccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhC---------CCcEEEecccCCCCCCCCCCc
Q 036830 236 VSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHD---------GVDIISISIGLSNSEADYMND 305 (760)
Q Consensus 236 ~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~---------g~dVIN~SlG~~~~~~~~~~~ 305 (760)
.|||.+++|+++||++++| +..+++++++|++++. +..|.|||+|+. ..-
T Consensus 272 --------------~GvAK~s~lvaVKVl~~dGsGt~Sdvi~GvE~~~k~h~~~k~~~~k~sv~NlSlGg~------~S~ 331 (501)
T KOG1153|consen 272 --------------FGVAKNSNLVAVKVLRSDGSGTVSDVIKGVEFVVKHHEKKKKKEGKKSVANLSLGGF------RSA 331 (501)
T ss_pred --------------cccccccceEEEEEeccCCcEeHHHHHhHHHHHHHHhhhhhcccCCCeEEEEecCCc------ccH
Confidence 5999999999999999998 9999999999999975 468999999998 346
Q ss_pred HHHHHHHHHHhCCcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeee
Q 036830 306 PIAIGALHAQQRGVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPL 384 (760)
Q Consensus 306 ~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~ 384 (760)
++..|+++|.+.|+.+++||||+..+.+ +.++.+..+|||||++..
T Consensus 332 aLn~AV~~A~~~Gi~fa~AAGNe~eDAC~~SPass~~aITVGAst~~--------------------------------- 378 (501)
T KOG1153|consen 332 ALNMAVNAASERGIHFAVAAGNEHEDACNSSPASSKKAITVGASTKN--------------------------------- 378 (501)
T ss_pred HHHHHHHHHhhcCeEEEEcCCCcchhhhccCcccccccEEecccccc---------------------------------
Confidence 6788889999999999999999998876 455788999999997642
Q ss_pred EecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHh
Q 036830 385 AYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYIN 464 (760)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~ 464 (760)
T Consensus 379 -------------------------------------------------------------------------------- 378 (501)
T KOG1153|consen 379 -------------------------------------------------------------------------------- 378 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecc
Q 036830 465 SNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGT 544 (760)
Q Consensus 465 ~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGT 544 (760)
+.+|.||+||+|+ ||.|||.+|+|+|.+.. ......|||
T Consensus 379 ---------------------D~iA~FSN~G~CV--------diFAPGv~IlSs~iGs~------------~at~ilSGT 417 (501)
T KOG1153|consen 379 ---------------------DTIAFFSNWGKCV--------DIFAPGVNILSSWIGSN------------NATAILSGT 417 (501)
T ss_pred ---------------------cchhhhcCcccee--------eeecCchhhhhhhhcCc------------cchheeecc
Confidence 6789999999999 99999999999998754 567899999
Q ss_pred cchhhhHHHHHHHHHHhCCC---------CCHHHHHHHHHhccc
Q 036830 545 SMACPHVTGAAAFIKSVRRK---------WTYSMIKSALMTTAT 579 (760)
Q Consensus 545 SmAaP~VAG~aALl~q~~P~---------ls~~~ik~~L~~TA~ 579 (760)
|||+|||||++|..++.+|. .+|.++|..++.-..
T Consensus 418 SMasPhvaG~aAy~ls~~~~~~~~f~n~~~s~~~lk~~~l~~~~ 461 (501)
T KOG1153|consen 418 SMASPHVAGLAAYFLSLGPLPDSSFANDAGSPSELKKRLLKFKT 461 (501)
T ss_pred cccCcchhhhHHHhhhcCCCChHHhhhccCChHHhhhhhhcccc
Confidence 99999999999999999883 388888888877555
|
|
| >cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-44 Score=385.14 Aligned_cols=219 Identities=28% Similarity=0.324 Sum_probs=166.3
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC---CCHHHHHHHHHHHHhCCCcEEEeccc
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG---CSGAAILQAIDDAIHDGVDIISISIG 294 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~~g~dVIN~SlG 294 (760)
.|+.+|||||||||||+..+ +..+.||||+|+|+++|+++... +....+++||+++++.|++|||||||
T Consensus 182 ~d~~gHGThVAGIIAg~~~~--------~~~~~GVAP~A~I~svkv~d~~~gs~~t~~~l~~ai~~ai~~gadVIN~SlG 253 (412)
T cd04857 182 TDSGAHGTHVAGIAAAHFPE--------EPERNGVAPGAQIVSIKIGDTRLGSMETGTALVRAMIAAIETKCDLINMSYG 253 (412)
T ss_pred CCCCCCHHHHHHHHhCCCCC--------CCceEEecCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHcCCCEEEecCC
Confidence 46789999999999998632 23457999999999999986532 23467999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHH-HHHhCCcEEEEecCCCCCCCCCccC---CCCceEEeccccccccceeeEEeCCCeeEeeee
Q 036830 295 LSNSEADYMNDPIAIGAL-HAQQRGVVVICSAGNDGPYPFTVAN---TAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTA 370 (760)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~-~a~~~Gi~vV~AAGN~G~~~~~~~~---~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~ 370 (760)
... ... ....+..++. .+.++|+++|+||||+|+...++.. ..+++|+|||+........
T Consensus 254 ~~~-~~~-~~~~~~~~~~~~~~~~GVlvVaAAGN~G~~~~tv~~P~~~~~~VIsVGA~~~~~~~~~-------------- 317 (412)
T cd04857 254 EAT-HWP-NSGRIIELMNEAVNKHGVIFVSSAGNNGPALSTVGAPGGTTSSVIGVGAYVSPEMMAA-------------- 317 (412)
T ss_pred cCC-CCc-cchHHHHHHHHHHHhCCCEEEEECCCCCCCccccCCccccCCCeEEEcceeccCcccc--------------
Confidence 874 111 1123333443 3457999999999999987776543 4689999999643210000
Q ss_pred eecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEE
Q 036830 371 ISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAE 450 (760)
Q Consensus 371 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~ 450 (760)
.|..
T Consensus 318 --------------~y~~-------------------------------------------------------------- 321 (412)
T cd04857 318 --------------EYSL-------------------------------------------------------------- 321 (412)
T ss_pred --------------cccc--------------------------------------------------------------
Confidence 0000
Q ss_pred echhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCC
Q 036830 451 VGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIP 530 (760)
Q Consensus 451 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~ 530 (760)
.....+.++.||||||+. ++.+||||+|||++|.|.-...
T Consensus 322 ------------------------------~~~~~~~~~~fSSrGP~~--dG~~~pdI~APG~~I~s~p~~~-------- 361 (412)
T cd04857 322 ------------------------------REKLPGNQYTWSSRGPTA--DGALGVSISAPGGAIASVPNWT-------- 361 (412)
T ss_pred ------------------------------ccccCCccccccccCCcc--cCCcCceEEeCCCcEEEcccCC--------
Confidence 001135689999999998 9999999999999998752111
Q ss_pred CCCCCCcceeeecccchhhhHHHHHHHHHH----hCCCCCHHHHHHHHHhcccc
Q 036830 531 AGEKPATYALRSGTSMACPHVTGAAAFIKS----VRRKWTYSMIKSALMTTATV 580 (760)
Q Consensus 531 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~ik~~L~~TA~~ 580 (760)
...|..|+|||||||||||++|||++ .+|+|+|.+||++|++||++
T Consensus 362 ----~~~~~~~sGTSmAaP~VAG~aALllSa~k~~~~~~tp~~Vk~aL~~TA~~ 411 (412)
T cd04857 362 ----LQGSQLMNGTSMSSPNACGGIALLLSGLKAEGIPYTPYSVRRALENTAKK 411 (412)
T ss_pred ----CCCeEEecccHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCcc
Confidence 15789999999999999999999975 46899999999999999985
|
Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing. |
| >cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=371.33 Aligned_cols=257 Identities=31% Similarity=0.476 Sum_probs=205.4
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|+|||+||+++||+|.+.... .| .+.... .......|..+|||||
T Consensus 1 G~gv~VaviDsGv~~~h~~l~~~~~~----~~-----------------------~~~~~~---~~~~~~~d~~~HGT~v 50 (264)
T cd07487 1 GKGITVAVLDTGIDAPHPDFDGRIIR----FA-----------------------DFVNTV---NGRTTPYDDNGHGTHV 50 (264)
T ss_pred CCCcEEEEEeCCCCCCCccccccccc----cc-----------------------cccccc---cCCCCCCCCCCchHHH
Confidence 89999999999999999999853211 00 000000 0124556778999999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhC----CCcEEEecccCCCCCCCC
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHD----GVDIISISIGLSNSEADY 302 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIN~SlG~~~~~~~~ 302 (760)
||||+|...+. .+.+.||||+|+|+.+|++++.+ ....++++||+|+++. +++|||||||... ....
T Consensus 51 Agiiag~~~~~-------~~~~~Giap~a~i~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~Iin~S~g~~~-~~~~ 122 (264)
T cd07487 51 AGIIAGSGRAS-------NGKYKGVAPGANLVGVKVLDDSGSGSESDIIAGIDWVVENNEKYNIRVVNLSLGAPP-DPSY 122 (264)
T ss_pred HHHHhcCCccc-------CCceEEECCCCeEEEEEeecCCCCccHHHHHHHHHHHHhhccccCceEEEeccCCCC-CCCC
Confidence 99999986431 23458999999999999998876 7888999999999998 9999999999885 2245
Q ss_pred CCcHHHHHHHHHHhCCcEEEEecCCCCCCCC--CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCc
Q 036830 303 MNDPIAIGALHAQQRGVVVICSAGNDGPYPF--TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSK 380 (760)
Q Consensus 303 ~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~--~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 380 (760)
..+.+..+++++.++|++||+||||+|.... ..+...+++|+|||++.+..
T Consensus 123 ~~~~~~~~~~~~~~~gilvv~aaGN~~~~~~~~~~p~~~~~vi~Vga~~~~~~--------------------------- 175 (264)
T cd07487 123 GEDPLCQAVERLWDAGIVVVVAAGNSGPGPGTITSPGNSPKVITVGAVDDNGP--------------------------- 175 (264)
T ss_pred CCCHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCCcccCCCceEEEeccCCCC---------------------------
Confidence 6678888899999999999999999997765 45667799999998754310
Q ss_pred eeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHH
Q 036830 381 TYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRII 460 (760)
Q Consensus 381 ~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 460 (760)
T Consensus 176 -------------------------------------------------------------------------------- 175 (264)
T cd07487 176 -------------------------------------------------------------------------------- 175 (264)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCccee
Q 036830 461 NYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYAL 540 (760)
Q Consensus 461 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~ 540 (760)
....++.||++||+. ++++||||+|||++|++..+.... ......+.|..
T Consensus 176 -----------------------~~~~~~~~s~~G~~~--~~~~~~di~apG~~i~~~~~~~~~-----~~~~~~~~~~~ 225 (264)
T cd07487 176 -----------------------HDDGISYFSSRGPTG--DGRIKPDVVAPGENIVSCRSPGGN-----PGAGVGSGYFE 225 (264)
T ss_pred -----------------------CCccccccccCCCCC--CCCcCCCEEccccceEeccccccc-----cCCCCCCceEe
Confidence 013468899999998 899999999999999998653210 01112267899
Q ss_pred eecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 541 RSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 541 ~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
++|||||||+|||++|||+|++|.+++.+||++|++||+
T Consensus 226 ~~GTS~Aap~vaG~~All~~~~p~~~~~~ik~~L~~tA~ 264 (264)
T cd07487 226 MSGTSMATPHVSGAIALLLQANPILTPDEVKCILRDTAT 264 (264)
T ss_pred ccccchHHHHHHHHHHHHHHHCcCCCHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-43 Score=370.89 Aligned_cols=261 Identities=27% Similarity=0.310 Sum_probs=200.4
Q ss_pred cccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCC
Q 036830 142 HKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRD 219 (760)
Q Consensus 142 ~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d 219 (760)
++|..+ |+||+|+|||||||++||+|.+..... .+ ......+.+.... .+......|
T Consensus 1 ~aw~~g~~G~gv~IaviDtGid~~Hp~~~~~~~~~-------------~~------~~~~~~~~~~~~~--~~~~~~~~~ 59 (273)
T cd07485 1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDGD-------------GY------DPAVNGYNFVPNV--GDIDNDVSV 59 (273)
T ss_pred CccccccCCCCcEEEEEeCCCCCCChhhccCCCCC-------------Cc------ccccCCccccccc--CCcCCCCCC
Confidence 378888 999999999999999999998641100 00 0000000010000 001234557
Q ss_pred CCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCC
Q 036830 220 PLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNS 298 (760)
Q Consensus 220 ~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~ 298 (760)
..+|||||||||+|...+....-|++ .+.|+||+|+|+.+|++...+ .....++++|+|+++.|++|||||||...
T Consensus 60 ~~gHGT~VAgiia~~~~~~~~~g~i~--~~~gvap~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~g~~~- 136 (273)
T cd07485 60 GGGHGTHVAGTIAAVNNNGGGVGGIA--GAGGVAPGVKIMSIQIFAGRYYVGDDAVAAAIVYAADNGAVILQNSWGGTG- 136 (273)
T ss_pred CCCCHHHHHHHHHcccCCCcceeccc--cccccCCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCcEEEecCCCCC-
Confidence 78999999999999865432222222 346799999999999998765 77889999999999999999999999873
Q ss_pred CCCCCCcHHHHHHHHHHhC-------CcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeee
Q 036830 299 EADYMNDPIAIGALHAQQR-------GVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAI 371 (760)
Q Consensus 299 ~~~~~~~~~~~a~~~a~~~-------Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~ 371 (760)
...+...+..++..+.++ |++||+||||+|......++..+++|+||+++.+
T Consensus 137 -~~~~~~~~~~a~~~~~~~~~~~~~~g~lvv~AaGN~g~~~~~~pa~~~~vi~V~a~~~~-------------------- 195 (273)
T cd07485 137 -GGIYSPLLKDAFDYFIENAGGSPLDGGIVVFSAGNSYTDEHRFPAAYPGVIAVAALDTN-------------------- 195 (273)
T ss_pred -ccccCHHHHHHHHHHHHhcccccCCCeEEEEecCCCCCCCCCCcccCCCeEEEEeccCC--------------------
Confidence 234556677777888888 9999999999998877778888999999986432
Q ss_pred ecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEe
Q 036830 372 SLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEV 451 (760)
Q Consensus 372 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i 451 (760)
T Consensus 196 -------------------------------------------------------------------------------- 195 (273)
T cd07485 196 -------------------------------------------------------------------------------- 195 (273)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCc-eEEeeecCCCCCCCCCC
Q 036830 452 GKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGV-AVLAAIVPRPDRPGGIP 530 (760)
Q Consensus 452 ~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~-~I~Sa~~~~~~~~~~~~ 530 (760)
+.++.||++|+.. ||+|||. .|+++++....
T Consensus 196 ----------------------------------~~~~~~S~~g~~~--------~i~apG~~~i~~~~~~~~~------ 227 (273)
T cd07485 196 ----------------------------------DNKASFSNYGRWV--------DIAAPGVGTILSTVPKLDG------ 227 (273)
T ss_pred ----------------------------------CCcCccccCCCce--------EEEeCCCCccccccccccC------
Confidence 4467899999977 9999999 89888765311
Q ss_pred CCCCCCcceeeecccchhhhHHHHHHHHHHhCCC-CCHHHHHHHHHhc
Q 036830 531 AGEKPATYALRSGTSMACPHVTGAAAFIKSVRRK-WTYSMIKSALMTT 577 (760)
Q Consensus 531 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~-ls~~~ik~~L~~T 577 (760)
.....|..++|||||||+|||++|||+|++|. ++|+|||++|++|
T Consensus 228 --~~~~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~~~~i~~~L~~T 273 (273)
T cd07485 228 --DGGGNYEYLSGTSMAAPHVSGVAALVLSKFPDVFTPEQIRKLLEES 273 (273)
T ss_pred --CCCCCeEeeccHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhC
Confidence 11267899999999999999999999999999 9999999999986
|
Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. Howev |
| >cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-43 Score=364.19 Aligned_cols=230 Identities=30% Similarity=0.385 Sum_probs=192.7
Q ss_pred ccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCC
Q 036830 143 KYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDP 220 (760)
Q Consensus 143 ~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~ 220 (760)
.|..+ |+||+|||||+||+++||+|.+. +...+.+... ....|.
T Consensus 17 ~~~~~~~G~gv~VaViDsGi~~~h~~~~~~---------------------------~~~~~~~~~~-------~~~~d~ 62 (255)
T cd04077 17 YYYDSSTGSGVDVYVLDTGIRTTHVEFGGR---------------------------AIWGADFVGG-------DPDSDC 62 (255)
T ss_pred eEecCCCCCCcEEEEEcCCCCCCChhhhCC---------------------------eeeeeecCCC-------CCCCCC
Confidence 55555 99999999999999999999741 1112222221 225678
Q ss_pred CCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhC-----CCcEEEeccc
Q 036830 221 LGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHD-----GVDIISISIG 294 (760)
Q Consensus 221 ~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~-----g~dVIN~SlG 294 (760)
.+|||||||||++.. .||||+|+|+.+|+++..+ ...+.++++++|+++. +++|||||||
T Consensus 63 ~~HGT~vAgiia~~~--------------~GvAp~a~i~~~~i~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~iin~S~g 128 (255)
T cd04077 63 NGHGTHVAGTVGGKT--------------YGVAKKANLVAVKVLDCNGSGTLSGIIAGLEWVANDATKRGKPAVANMSLG 128 (255)
T ss_pred CccHHHHHHHHHccc--------------cCcCCCCeEEEEEEeCCCCCcCHHHHHHHHHHHHhcccccCCCeEEEeCCC
Confidence 899999999999864 5999999999999998875 7788999999999987 4899999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-CCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeec
Q 036830 295 LSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP-FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISL 373 (760)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~ 373 (760)
... ...+..++.++.++|+++|+||||+|... ...++..|++|+||+++.+
T Consensus 129 ~~~------~~~~~~~~~~~~~~g~liV~aaGN~g~~~~~~~pa~~~~vi~Vga~~~~---------------------- 180 (255)
T cd04077 129 GGA------STALDAAVAAAVNAGVVVVVAAGNSNQDACNYSPASAPEAITVGATDSD---------------------- 180 (255)
T ss_pred CCC------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCcCccCCCceEEEeccCCC----------------------
Confidence 872 45677778899999999999999999765 4556778999999986532
Q ss_pred ccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEech
Q 036830 374 SNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGK 453 (760)
Q Consensus 374 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~ 453 (760)
T Consensus 181 -------------------------------------------------------------------------------- 180 (255)
T cd04077 181 -------------------------------------------------------------------------------- 180 (255)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCC
Q 036830 454 VAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE 533 (760)
Q Consensus 454 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~ 533 (760)
+..+.||++||.. ||+|||.+|.++.....
T Consensus 181 --------------------------------~~~~~~S~~g~~~--------~i~apG~~i~~~~~~~~---------- 210 (255)
T cd04077 181 --------------------------------DARASFSNYGSCV--------DIFAPGVDILSAWIGSD---------- 210 (255)
T ss_pred --------------------------------CCccCcccCCCCC--------cEEeCCCCeEecccCCC----------
Confidence 3367899999987 99999999999876422
Q ss_pred CCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 036830 534 KPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATV 580 (760)
Q Consensus 534 ~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~ 580 (760)
..|..++|||||||+|||++|||+|++|.+++++||++|++||++
T Consensus 211 --~~~~~~~GTS~Aap~vaG~~All~~~~p~~~~~~v~~~L~~tA~~ 255 (255)
T cd04077 211 --TATATLSGTSMAAPHVAGLAAYLLSLGPDLSPAEVKARLLNLATK 255 (255)
T ss_pred --CcEEeeCcHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhccC
Confidence 689999999999999999999999999999999999999999973
|
The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti |
| >cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-43 Score=372.49 Aligned_cols=265 Identities=23% Similarity=0.202 Sum_probs=187.4
Q ss_pred EEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhc
Q 036830 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTA 231 (760)
Q Consensus 152 ~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ 231 (760)
+|||||||||.+||+|...- .....+... .....|..||||||||||
T Consensus 2 ~VaviDtGi~~~hp~l~~~~---------------------------~~~~~~~~~------~~~~~d~~gHGT~vAgii 48 (291)
T cd04847 2 IVCVLDSGINRGHPLLAPAL---------------------------AEDDLDSDE------PGWTADDLGHGTAVAGLA 48 (291)
T ss_pred EEEEecCCCCCCChhhhhhh---------------------------ccccccccC------CCCcCCCCCChHHHHHHH
Confidence 79999999999999997410 111111110 011568899999999999
Q ss_pred ccccccccccccccCCcccccCCCCeEEEEEeccCCC-----CCHHHHHHHHHHHHhCC---CcEEEecccCCCCCCCCC
Q 036830 232 AGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-----CSGAAILQAIDDAIHDG---VDIISISIGLSNSEADYM 303 (760)
Q Consensus 232 Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-----~~~~~i~~ai~~a~~~g---~dVIN~SlG~~~~~~~~~ 303 (760)
++.... .....|+||+|+|+.+|++.+.+ ....++++||+|+++.. ++|||||||.........
T Consensus 49 a~~~~~--------~~~~~gvap~~~l~~~kv~~~~g~~~~~~~~~~~~~ai~~a~~~~~~~~~ViN~SlG~~~~~~~~~ 120 (291)
T cd04847 49 LYGDLT--------LPGNGLPRPGCRLESVRVLPPNGENDPELYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPIDDGR 120 (291)
T ss_pred HcCccc--------CCCCCCcccceEEEEEEEcCCCCCCCccChHHHHHHHHHHHHHhCCCceeEEEEecCCCCCccCCC
Confidence 976532 12347999999999999998763 56788999999999753 499999999985211111
Q ss_pred CcHHHHHHH-HHHhCCcEEEEecCCCCCCCCC------------ccCCCCceEEeccccccccceeeEEeCCCeeEeeee
Q 036830 304 NDPIAIGAL-HAQQRGVVVICSAGNDGPYPFT------------VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTA 370 (760)
Q Consensus 304 ~~~~~~a~~-~a~~~Gi~vV~AAGN~G~~~~~------------~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~ 370 (760)
...+..+++ .+.++|++||+||||+|..... .++.++++|+|||++.+.........
T Consensus 121 ~~~~~~~id~~a~~~gvlvV~aAGN~g~~~~~~~~~~~~~~~i~~Pa~~~~vItVgA~~~~~~~~~~s~~---------- 190 (291)
T cd04847 121 PSSWAAALDQLAAEYDVLFVVSAGNLGDDDAADGPPRIQDDEIEDPADSVNALTVGAITSDDDITDRARY---------- 190 (291)
T ss_pred CCcHHHHHHHHhccCCeEEEEECCCCCccccccccccccccccCCHHHhhhheeeeeeecCccCCCcccc----------
Confidence 124444554 3568999999999999977543 24556899999998764211000000
Q ss_pred eecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEE
Q 036830 371 ISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAE 450 (760)
Q Consensus 371 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~ 450 (760)
T Consensus 191 -------------------------------------------------------------------------------- 190 (291)
T cd04847 191 -------------------------------------------------------------------------------- 190 (291)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred echhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCC----
Q 036830 451 VGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRP---- 526 (760)
Q Consensus 451 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~---- 526 (760)
+.......+.||++||.. ++.+||||+|||++|.+.........
T Consensus 191 ------------------------------~~~~~~~~~~fs~~Gp~~--~~~~KPDl~apG~~i~~~~~~~~~~~~~~~ 238 (291)
T cd04847 191 ------------------------------SAVGPAPAGATTSSGPGS--PGPIKPDVVAFGGNLAYDPSGNAADGDLSL 238 (291)
T ss_pred ------------------------------cccccccCCCccccCCCC--CCCcCCcEEeeCCceeecCCCCCccCccee
Confidence 000001223499999998 89999999999999988643211000
Q ss_pred CCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 527 GGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 527 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
-..........|..++|||||||+|||++|||+|++|+++|++||++|++||+
T Consensus 239 ~~~~~~~~~~~~~~~~GTS~AaP~Vag~aAll~~~~p~~t~~~ikalL~~sA~ 291 (291)
T cd04847 239 LTTLSSPSGGGFVTVGGTSFAAPLAARLAAGLFAELPELSPETIRALLIHSAE 291 (291)
T ss_pred eecccCCCCCcccccccchHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhcC
Confidence 00001122378999999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=362.83 Aligned_cols=240 Identities=31% Similarity=0.390 Sum_probs=203.1
Q ss_pred cccccccC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSR 218 (760)
Q Consensus 140 ~~~~~~~~-G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 218 (760)
...+|..+ |+||+|+|||+||+++||+|.. .++...+++.+. ...+.
T Consensus 18 ~~~~~~~~~G~gv~I~viDsGi~~~h~~l~~--------------------------~~~~~~~~~~~~------~~~~~ 65 (260)
T cd07484 18 APKAWDITGGSGVTVAVVDTGVDPTHPDLLK--------------------------VKFVLGYDFVDN------DSDAM 65 (260)
T ss_pred hHHHHhhcCCCCCEEEEEeCCCCCCCccccc--------------------------CCcccceeccCC------CCCCC
Confidence 67899988 9999999999999999999842 122222233222 13356
Q ss_pred CCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCC
Q 036830 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSN 297 (760)
Q Consensus 219 d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~ 297 (760)
|..+|||||||||++...+. ..+.|+||+|+|+.+|++++.+ +...+++++|+++++.+++|||||||...
T Consensus 66 d~~~HGT~vagii~~~~~~~--------~~~~Giap~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~~~~~iin~S~g~~~ 137 (260)
T cd07484 66 DDNGHGTHVAGIIAAATNNG--------TGVAGVAPKAKIMPVKVLDANGSGSLADIANGIRYAADKGAKVINLSLGGGL 137 (260)
T ss_pred CCCCcHHHHHHHHhCccCCC--------CceEeECCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCeEEEecCCCCC
Confidence 78899999999999875332 2357999999999999998766 78889999999999999999999999883
Q ss_pred CCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCC
Q 036830 298 SEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLS 377 (760)
Q Consensus 298 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 377 (760)
....+..++..+.++|++||+||||+|.....+++..+++|+||+.+.+
T Consensus 138 -----~~~~~~~~~~~a~~~gilvV~aaGN~g~~~~~~pa~~~~vi~Vga~~~~-------------------------- 186 (260)
T cd07484 138 -----GSTALQEAINYAWNKGVVVVAAAGNEGVSSVSYPAAYPGAIAVAATDQD-------------------------- 186 (260)
T ss_pred -----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCCeEEEEeeCCC--------------------------
Confidence 4566777778889999999999999998888888999999999986432
Q ss_pred CCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHH
Q 036830 378 RSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGF 457 (760)
Q Consensus 378 ~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~ 457 (760)
T Consensus 187 -------------------------------------------------------------------------------- 186 (260)
T cd07484 187 -------------------------------------------------------------------------------- 186 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCc
Q 036830 458 RIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT 537 (760)
Q Consensus 458 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~ 537 (760)
+..+.||++|+.. |++|||.+|++..+. +.
T Consensus 187 ----------------------------~~~~~~s~~g~~~--------~~~apG~~i~~~~~~--------------~~ 216 (260)
T cd07484 187 ----------------------------DKRASFSNYGKWV--------DVSAPGGGILSTTPD--------------GD 216 (260)
T ss_pred ----------------------------CCcCCcCCCCCCc--------eEEeCCCCcEeecCC--------------CC
Confidence 3457889999876 999999999998765 67
Q ss_pred ceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 036830 538 YALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVY 581 (760)
Q Consensus 538 y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~ 581 (760)
|..++|||||||+|||++||+++++| +++++||++|++||+++
T Consensus 217 ~~~~~GTS~Aap~vag~~Al~~~~~p-~t~~~i~~~L~~tA~~~ 259 (260)
T cd07484 217 YAYMSGTSMATPHVAGVAALLYSQGP-LSASEVRDALKKTADDI 259 (260)
T ss_pred EEEeeeHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHhCccC
Confidence 99999999999999999999999999 99999999999999864
|
Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid |
| >cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=361.50 Aligned_cols=253 Identities=28% Similarity=0.341 Sum_probs=189.0
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhh
Q 036830 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAS 229 (760)
Q Consensus 150 Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAG 229 (760)
||+|||||+|||++||+|.+.- .....|..+. ........|..+|||||||
T Consensus 1 GV~VaviDsGv~~~hp~l~~~~---------------------------~~~~~~~~~~--~~~~~~~~d~~~HGT~vAg 51 (254)
T cd07490 1 GVTVAVLDTGVDADHPDLAGRV---------------------------AQWADFDENR--RISATEVFDAGGHGTHVSG 51 (254)
T ss_pred CCEEEEEeCCCCCCCcchhccc---------------------------CCceeccCCC--CCCCCCCCCCCCcHHHHHH
Confidence 7999999999999999997421 1111111110 0012445678899999999
Q ss_pred hcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHHH
Q 036830 230 TAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAI 309 (760)
Q Consensus 230 i~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~ 309 (760)
||+|+.. ++.+.||||+|+|+.+|++.+.++..++++++|+|+++.+++|||||||... .. .+.+..
T Consensus 52 iia~~~~---------~~~~~GvAp~a~i~~~~v~~~~~~~~~~~~~ai~~a~~~~~~Vin~S~g~~~--~~--~~~~~~ 118 (254)
T cd07490 52 TIGGGGA---------KGVYIGVAPEADLLHGKVLDDGGGSLSQIIAGMEWAVEKDADVVSMSLGGTY--YS--EDPLEE 118 (254)
T ss_pred HHhcCCC---------CCCEEEECCCCEEEEEEEecCCCCcHHHHHHHHHHHHhCCCCEEEECCCcCC--CC--CcHHHH
Confidence 9999864 2334699999999999999877788899999999999999999999999884 11 556666
Q ss_pred HHHHHHh-CCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecc
Q 036830 310 GALHAQQ-RGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGK 388 (760)
Q Consensus 310 a~~~a~~-~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~ 388 (760)
+++...+ +|++||+||||+|......++..+++|+|||++.+........
T Consensus 119 ~~~~~~~~~g~lvV~aAGN~g~~~~~~pa~~~~vi~Vga~~~~~~~~~~s~----------------------------- 169 (254)
T cd07490 119 AVEALSNQTGALFVVSAGNEGHGTSGSPGSAYAALSVGAVDRDDEDAWFSS----------------------------- 169 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCCCCCCCCCCccCCceeEEecccccCCccCccC-----------------------------
Confidence 6665554 6999999999999887777788899999999765421000000
Q ss_pred cccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCC
Q 036830 389 AIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKN 468 (760)
Q Consensus 389 ~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 468 (760)
T Consensus 170 -------------------------------------------------------------------------------- 169 (254)
T cd07490 170 -------------------------------------------------------------------------------- 169 (254)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchh
Q 036830 469 PTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548 (760)
Q Consensus 469 ~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAa 548 (760)
.........+.+|.. .....|||++|||.+|+++.... .....|..++||||||
T Consensus 170 ---------------~g~~~~~~~~~~~~~-~~~~~~~d~~apG~~i~~~~~~~----------~~~~~~~~~~GTS~Aa 223 (254)
T cd07490 170 ---------------FGSSGASLVSAPDSP-PDEYTKPDVAAPGVDVYSARQGA----------NGDGQYTRLSGTSMAA 223 (254)
T ss_pred ---------------CcccccccccCCCCC-ccCCcCceEEeccCCeEccccCC----------CCCCCeeecccHHHHH
Confidence 000112223333432 25568999999999999865221 1126799999999999
Q ss_pred hhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 549 P~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
|+|||++|||+|++|+|++++||.+|++||+
T Consensus 224 P~vaG~aAl~~~~~p~~~~~~i~~~L~~tA~ 254 (254)
T cd07490 224 PHVAGVAALLAAAHPDLSPEQIKDALTETAY 254 (254)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=361.85 Aligned_cols=209 Identities=27% Similarity=0.323 Sum_probs=170.0
Q ss_pred CCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHH----------hC
Q 036830 215 GSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAI----------HD 284 (760)
Q Consensus 215 ~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~----------~~ 284 (760)
....+..+|||||||||+|...++ ..+.||||+|+|+.+|+++..+...+++++|++|++ .+
T Consensus 65 ~~~~~~~~HGT~vAgiiaa~~~~~--------~~~~GvAp~a~i~~~~v~~~~~~~~~~i~~a~~~a~~~~~~~~~~~~~ 136 (285)
T cd07496 65 SGVSPSSWHGTHVAGTIAAVTNNG--------VGVAGVAWGARILPVRVLGKCGGTLSDIVDGMRWAAGLPVPGVPVNPN 136 (285)
T ss_pred CCCCCCCCCHHHHHHHHhCcCCCC--------CCceeecCCCeEEEEEEecCCCCcHHHHHHHHHHHhccCcCCCcccCC
Confidence 334567899999999999987422 234799999999999999877778899999999998 45
Q ss_pred CCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-CCccCCCCceEEeccccccccceeeEEeCCC
Q 036830 285 GVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP-FTVANTAPWLFTVAASTIDRDFQSTVLLGNG 363 (760)
Q Consensus 285 g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~ 363 (760)
+++|||||||... .....+..++..+.++|++||+||||+|... ...++..+++|+||+++.+
T Consensus 137 ~~~Iin~S~G~~~----~~~~~~~~ai~~a~~~GvivV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------ 200 (285)
T cd07496 137 PAKVINLSLGGDG----ACSATMQNAINDVRARGVLVVVAAGNEGSSASVDAPANCRGVIAVGATDLR------------ 200 (285)
T ss_pred CCeEEEeCCCCCC----CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCCCCCCceEEEeccCCC------------
Confidence 7899999999884 1156777888999999999999999999776 5667788999999986432
Q ss_pred eeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCC
Q 036830 364 KAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTER 443 (760)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~ 443 (760)
T Consensus 201 -------------------------------------------------------------------------------- 200 (285)
T cd07496 201 -------------------------------------------------------------------------------- 200 (285)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCC
Q 036830 444 GILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRP 523 (760)
Q Consensus 444 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~ 523 (760)
+.++.||++|+.. ||.|||++|.+......
T Consensus 201 ------------------------------------------~~~~~~S~~g~~v--------di~apG~~i~~~~~~~~ 230 (285)
T cd07496 201 ------------------------------------------GQRASYSNYGPAV--------DVSAPGGDCASDVNGDG 230 (285)
T ss_pred ------------------------------------------CCcccccCCCCCC--------CEEeCCCCccccCCCCc
Confidence 4568899999987 99999999998875432
Q ss_pred CCC-CCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 036830 524 DRP-GGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577 (760)
Q Consensus 524 ~~~-~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~T 577 (760)
... ...........|..++|||||||+|||++|||+|++|+|++++||++|++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAlv~~~~p~lt~~~v~~~L~~t 285 (285)
T cd07496 231 YPDSNTGTTSPGGSTYGFLQGTSMAAPHVAGVAALMKSVNPSLTPAQIESLLQST 285 (285)
T ss_pred cccccccccCCCCCceEeeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 110 000112223678999999999999999999999999999999999999976
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=360.60 Aligned_cols=250 Identities=23% Similarity=0.255 Sum_probs=182.9
Q ss_pred ccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCC
Q 036830 139 WFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGS 216 (760)
Q Consensus 139 ~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 216 (760)
++..+|+++ |+||+||||||||+..|| |...++. + ++ .+..+ ....
T Consensus 9 ~~~~~~~~G~~G~Gv~VaViDTGv~~~h~-~~~~~~~-------~---------------~~----~~~~~-----~~~~ 56 (298)
T cd07494 9 NATRVHQRGITGRGVRVAMVDTGFYAHPF-FESRGYQ-------V---------------RV----VLAPG-----ATDP 56 (298)
T ss_pred ChhHHHhcCCCCCCcEEEEEeCCCcCCch-hhcCCcc-------c---------------ee----ecCCC-----CCCC
Confidence 367899998 999999999999999998 6532211 0 00 00000 0133
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
..|..||||||||++. ||||+|+|+.+|++++ ..+++++||+|+++++++|||||||..
T Consensus 57 ~~D~~gHGT~vag~i~------------------GvAP~a~i~~vkv~~~---~~~~~~~ai~~a~~~g~dVIn~SlG~~ 115 (298)
T cd07494 57 ACDENGHGTGESANLF------------------AIAPGAQFIGVKLGGP---DLVNSVGAFKKAISLSPDIISNSWGYD 115 (298)
T ss_pred CCCCCCcchheeecee------------------EeCCCCeEEEEEccCC---CcHHHHHHHHHHHhcCCCEEEeecccC
Confidence 5678899999998764 8999999999999864 567799999999999999999999986
Q ss_pred CCCC--C------CCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEee
Q 036830 297 NSEA--D------YMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKG 368 (760)
Q Consensus 297 ~~~~--~------~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g 368 (760)
.... . .....+..++++|.++|++||+||||++. .+++..|++|+|||++.+.. +
T Consensus 116 ~~~~~~~~~~~~~~~~~al~~ai~~A~~~Gi~vVaAAGN~~~---~~Pa~~p~viaVga~~~~~~---------g----- 178 (298)
T cd07494 116 LRSPGTSWSRSLPNALKALAATLQDAVARGIVVVFSAGNGGW---SFPAQHPEVIAAGGVFVDED---------G----- 178 (298)
T ss_pred CCCcccccccccchhhHHHHHHHHHHHHCCcEEEEeCCCCCC---CcCCCCCCEEEEEeEeccCC---------C-----
Confidence 4111 0 12345778888999999999999999874 56888999999999754310 0
Q ss_pred eeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccce
Q 036830 369 TAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPY 448 (760)
Q Consensus 369 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~ 448 (760)
T Consensus 179 -------------------------------------------------------------------------------- 178 (298)
T cd07494 179 -------------------------------------------------------------------------------- 178 (298)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccC--CCCCCCCCCcccCce----------------ee
Q 036830 449 AEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSS--RGPGLPTENILKPDV----------------AA 510 (760)
Q Consensus 449 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs--~Gp~~~~~~~~KPDI----------------~A 510 (760)
.....+++ +... ..+++.|||+ +|
T Consensus 179 -------------------------------------~~~~~~~~~~~~s~-~~~g~~~pd~~~~~g~~~~~~~~~~~~A 220 (298)
T cd07494 179 -------------------------------------ARRASSYASGFRSK-IYPGRQVPDVCGLVGMLPHAAYLMLPVP 220 (298)
T ss_pred -------------------------------------cccccccccCcccc-cCCCCccCccccccCcCCcccccccccC
Confidence 00001111 1111 1256777777 47
Q ss_pred CCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 036830 511 PGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYD 582 (760)
Q Consensus 511 PG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~ 582 (760)
||..|.+....... .....+.|..++|||||||||||++|||+|++|.|++++||.+|++||+++.
T Consensus 221 PG~~i~~~~~~~~~------~~~~~~~y~~~sGTS~Aap~vaG~aAll~~~~p~~~~~~v~~~l~~ta~~~~ 286 (298)
T cd07494 221 PGSQLDRSCAAFPD------GTPPNDGWGVFSGTSAAAPQVAGVCALMLQANPGLSPERARSLLNKTARDVT 286 (298)
T ss_pred CCcceeccccCCCC------CCCCCCCeEeeccchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcccC
Confidence 99998766532100 0011267999999999999999999999999999999999999999999763
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=352.07 Aligned_cols=240 Identities=28% Similarity=0.343 Sum_probs=191.1
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhh
Q 036830 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAST 230 (760)
Q Consensus 151 v~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi 230 (760)
|+|||||+||+++||+|.+.. ++...+.+... .....|..+||||||||
T Consensus 1 V~VaviDsGi~~~hp~l~~~~-------------------------~~~~~~~~~~~------~~~~~~~~~HGT~vAgi 49 (242)
T cd07498 1 VVVAIIDTGVDLNHPDLSGKP-------------------------KLVPGWNFVSN------NDPTSDIDGHGTACAGV 49 (242)
T ss_pred CEEEEecCCCCCCChhhccCc-------------------------CccCCccccCC------CCCCCCCCCCHHHHHHH
Confidence 689999999999999998520 01111111111 12456789999999999
Q ss_pred cccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHHH
Q 036830 231 AAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAI 309 (760)
Q Consensus 231 ~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~ 309 (760)
|+|+..+. ..+.||||+|+|+.+|++...+ +...++.++++|+++.+++|||||||... ........+..
T Consensus 50 iag~~~~~--------~~~~Gvap~a~i~~~~~~~~~~~~~~~~~~~ai~~a~~~~~~Vin~S~g~~~-~~~~~~~~~~~ 120 (242)
T cd07498 50 AAAVGNNG--------LGVAGVAPGAKLMPVRIADSLGYAYWSDIAQAITWAADNGADVISNSWGGSD-STESISSAIDN 120 (242)
T ss_pred HHhccCCC--------ceeEeECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHCCCeEEEeccCCCC-CCchHHHHHHH
Confidence 99986422 2347999999999999998765 77889999999999999999999999875 22344567777
Q ss_pred HHHHHHh-CCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecc
Q 036830 310 GALHAQQ-RGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGK 388 (760)
Q Consensus 310 a~~~a~~-~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~ 388 (760)
++..+.. +|+++|+||||+|......++..+++|+||+++..
T Consensus 121 ~~~~~~~~~gvliv~aaGN~g~~~~~~pa~~~~vi~Vga~~~~------------------------------------- 163 (242)
T cd07498 121 AATYGRNGKGGVVLFAAGNSGRSVSSGYAANPSVIAVAATDSN------------------------------------- 163 (242)
T ss_pred HHHHHhhcCCeEEEEecCCCCCccCCCCcCCCCeEEEEEeCCC-------------------------------------
Confidence 7788888 99999999999998877778888999999986532
Q ss_pred cccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCC
Q 036830 389 AIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKN 468 (760)
Q Consensus 389 ~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 468 (760)
T Consensus 164 -------------------------------------------------------------------------------- 163 (242)
T cd07498 164 -------------------------------------------------------------------------------- 163 (242)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchh
Q 036830 469 PTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548 (760)
Q Consensus 469 ~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAa 548 (760)
+.++.||++||.. |++|||.++.+....... ......+.|..++||||||
T Consensus 164 -----------------~~~~~~s~~g~~~--------~~~apG~~~~~~~~~~~~-----~~~~~~~~~~~~~GTS~Aa 213 (242)
T cd07498 164 -----------------DARASYSNYGNYV--------DLVAPGVGIWTTGTGRGS-----AGDYPGGGYGSFSGTSFAS 213 (242)
T ss_pred -----------------CCccCcCCCCCCe--------EEEeCcCCcccCCccccc-----cccCCCCceEeeCcHHHHH
Confidence 4467899999987 999999999888543210 0112236789999999999
Q ss_pred hhHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 036830 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTT 577 (760)
Q Consensus 549 P~VAG~aALl~q~~P~ls~~~ik~~L~~T 577 (760)
|+|||++|||+|++|+|+++|||++|++|
T Consensus 214 p~vaG~~All~~~~p~l~~~~i~~~L~~t 242 (242)
T cd07498 214 PVAAGVAALILSANPNLTPAEVEDILTST 242 (242)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 99999999999999999999999999976
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=351.70 Aligned_cols=249 Identities=30% Similarity=0.383 Sum_probs=192.8
Q ss_pred CCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccc---cccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccc
Q 036830 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGV---CMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGT 225 (760)
Q Consensus 149 ~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~---~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGT 225 (760)
+||+|||||||||++||+|.+. .|... +..+.+......-+...+. .|. ....++.|..+|||
T Consensus 2 ~~v~V~iiDtGid~~h~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~d~~~HGT 67 (259)
T cd07473 2 GDVVVAVIDTGVDYNHPDLKDN-------MWVNPGEIPGNGIDDDGNGYVDDIYGW-NFV------NNDNDPMDDNGHGT 67 (259)
T ss_pred CCCEEEEEeCCCCCCChhhccc-------cccCcccccccCcccCCCCcccCCCcc-ccc------CCCCCCCCCCCcHH
Confidence 6899999999999999999863 22211 1111111100000111111 111 12355678899999
Q ss_pred hhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCC
Q 036830 226 HTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMN 304 (760)
Q Consensus 226 hVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~ 304 (760)
||||||+|...++ ..+.||||+|+|+.+|++...+ ++..+++++|+++++.+++|||+|||... ..
T Consensus 68 ~va~ii~~~~~~~--------~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~vin~S~G~~~-----~~ 134 (259)
T cd07473 68 HVAGIIGAVGNNG--------IGIAGVAWNVKIMPLKFLGADGSGTTSDAIKAIDYAVDMGAKIINNSWGGGG-----PS 134 (259)
T ss_pred HHHHHHHCcCCCC--------CceEEeCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCC-----CC
Confidence 9999999987432 2347999999999999998876 88899999999999999999999999884 25
Q ss_pred cHHHHHHHHHHhCCcEEEEecCCCCCCC---CCccC--CCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCC
Q 036830 305 DPIAIGALHAQQRGVVVICSAGNDGPYP---FTVAN--TAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRS 379 (760)
Q Consensus 305 ~~~~~a~~~a~~~Gi~vV~AAGN~G~~~---~~~~~--~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 379 (760)
..+..++.++.++|+++|+||||+|... ..++. ..+++|+||+.+.+
T Consensus 135 ~~~~~~~~~~~~~g~ivV~aaGN~g~~~~~~~~~p~~~~~~~vi~Vga~~~~---------------------------- 186 (259)
T cd07473 135 QALRDAIARAIDAGILFVAAAGNDGTNNDKTPTYPASYDLDNIISVAATDSN---------------------------- 186 (259)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcCcCcccCCCCeEEEEecCCC----------------------------
Confidence 6777888999999999999999999662 23333 34789999875432
Q ss_pred ceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHH
Q 036830 380 KTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRI 459 (760)
Q Consensus 380 ~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l 459 (760)
T Consensus 187 -------------------------------------------------------------------------------- 186 (259)
T cd07473 187 -------------------------------------------------------------------------------- 186 (259)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcce
Q 036830 460 INYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYA 539 (760)
Q Consensus 460 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~ 539 (760)
+.++.||++||. +||+.|||.++++..+. +.|.
T Consensus 187 --------------------------~~~~~~s~~g~~-------~~~~~apG~~~~~~~~~--------------~~~~ 219 (259)
T cd07473 187 --------------------------DALASFSNYGKK-------TVDLAAPGVDILSTSPG--------------GGYG 219 (259)
T ss_pred --------------------------CCcCcccCCCCC-------CcEEEeccCCeEeccCC--------------CcEE
Confidence 345679999985 46999999999997654 7899
Q ss_pred eeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 540 LRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 540 ~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
.++|||||||+|||++||++|++|.+++++||++|++||+
T Consensus 220 ~~~GTS~AaP~vaG~~All~~~~~~~t~~~v~~~L~~tA~ 259 (259)
T cd07473 220 YMSGTSMATPHVAGAAALLLSLNPNLTAAQIKDAILSSAD 259 (259)
T ss_pred EeccHhHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=358.35 Aligned_cols=273 Identities=27% Similarity=0.318 Sum_probs=199.2
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|||||||||++||+|.+... .+.+| .++++.....+.+. ..|..+|||||
T Consensus 6 G~gv~VaviDtGi~~~hp~l~~~~~------------~~~~~----~~~~~~~~~~~~~~---------~~d~~~HGT~v 60 (293)
T cd04842 6 GKGQIVGVADTGLDTNHCFFYDPNF------------NKTNL----FHRKIVRYDSLSDT---------KDDVDGHGTHV 60 (293)
T ss_pred CcCCEEEEEecCCCCCCCcccCCCc------------CcCcc----CcccEEEeeccCCC---------CCCCCCCcchh
Confidence 9999999999999999999975321 01111 23444443333321 22789999999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC--CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCc
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG--CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMND 305 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~ 305 (760)
||||+|...+... ...+.||||+|+|+.+|++...+ ....++..+++++.+.+++|||||||... .. ...
T Consensus 61 Agiia~~~~~~~~-----~~~~~GvAp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~--~~-~~~ 132 (293)
T cd04842 61 AGIIAGKGNDSSS-----ISLYKGVAPKAKLYFQDIGDTSGNLSSPPDLNKLFSPMYDAGARISSNSWGSPV--NN-GYT 132 (293)
T ss_pred heeeccCCcCCCc-----ccccccccccCeEEEEEeeccCccccCCccHHHHHHHHHHhCCEEEeccCCCCC--cc-ccc
Confidence 9999998754321 11458999999999999998765 56677899999999999999999999984 11 123
Q ss_pred HHHHHHHHHH-h-CCcEEEEecCCCCCCCC---CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCc
Q 036830 306 PIAIGALHAQ-Q-RGVVVICSAGNDGPYPF---TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSK 380 (760)
Q Consensus 306 ~~~~a~~~a~-~-~Gi~vV~AAGN~G~~~~---~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 380 (760)
....++.++. + +|++||+||||+|.... ..+...+++|+|||++........
T Consensus 133 ~~~~~~~~~~~~~~g~lvV~aAGN~g~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~----------------------- 189 (293)
T cd04842 133 LLARAYDQFAYNNPDILFVFSAGNDGNDGSNTIGSPATAKNVLTVGASNNPSVSNGE----------------------- 189 (293)
T ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccccCcccccceEEEeeccCCCccccc-----------------------
Confidence 3334444333 3 89999999999997765 566778999999997654210000
Q ss_pred eeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHH
Q 036830 381 TYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRII 460 (760)
Q Consensus 381 ~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 460 (760)
.|..
T Consensus 190 ---------------------~~~~------------------------------------------------------- 193 (293)
T cd04842 190 ---------------------GGLG------------------------------------------------------- 193 (293)
T ss_pred ---------------------cccc-------------------------------------------------------
Confidence 0000
Q ss_pred HHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCccee
Q 036830 461 NYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYAL 540 (760)
Q Consensus 461 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~ 540 (760)
.......++.||++||+. ++++||||+|||++|+++..... .........|..
T Consensus 194 --------------------~~~~~~~~~~~S~~G~~~--~~~~~pdv~ApG~~i~~~~~~~~-----~~~~~~~~~~~~ 246 (293)
T cd04842 194 --------------------QSDNSDTVASFSSRGPTY--DGRIKPDLVAPGTGILSARSGGG-----GIGDTSDSAYTS 246 (293)
T ss_pred --------------------ccCCCCccccccCcCCCC--CCCcCCCEECCCCCeEeccCCCC-----CCCCCChhheee
Confidence 011236689999999987 89999999999999999975420 001112267899
Q ss_pred eecccchhhhHHHHHHHHHHhC-----C---CCCHHHHHHHHHhccc
Q 036830 541 RSGTSMACPHVTGAAAFIKSVR-----R---KWTYSMIKSALMTTAT 579 (760)
Q Consensus 541 ~sGTSmAaP~VAG~aALl~q~~-----P---~ls~~~ik~~L~~TA~ 579 (760)
++|||||||+|||++|||+|++ | .+++.++|++|++||+
T Consensus 247 ~~GTS~AaP~VaG~aAll~~~~~~~~~~~~~~~~~~~~ka~l~~sA~ 293 (293)
T cd04842 247 KSGTSMATPLVAGAAALLRQYFVDGYYPTKFNPSAALLKALLINSAR 293 (293)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhcCcCCCcCcCHHHHHHHHHhcCC
Confidence 9999999999999999999985 4 6677799999999985
|
Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases |
| >cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=344.09 Aligned_cols=226 Identities=32% Similarity=0.448 Sum_probs=188.3
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhh
Q 036830 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAS 229 (760)
Q Consensus 150 Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAG 229 (760)
||+|||||+||+++||+|.+. +...++|.... .....|..+|||||||
T Consensus 1 gv~V~iiDsGv~~~h~~l~~~---------------------------~~~~~~~~~~~-----~~~~~~~~~HGT~vA~ 48 (229)
T cd07477 1 GVKVAVIDTGIDSSHPDLKLN---------------------------IVGGANFTGDD-----NNDYQDGNGHGTHVAG 48 (229)
T ss_pred CCEEEEEcCCCCCCChhHhcc---------------------------ccCcccccCCC-----CCCCCCCCCCHHHHHH
Confidence 799999999999999999742 11112222210 0244568899999999
Q ss_pred hcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHH
Q 036830 230 TAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIA 308 (760)
Q Consensus 230 i~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~ 308 (760)
|+++.... ..+.|+||+|+|+.+|++...+ ....+++++++++++.+++|||||||... ....+.
T Consensus 49 ii~~~~~~---------~~~~giap~a~i~~~~~~~~~~~~~~~~l~~ai~~a~~~~~~Vin~S~g~~~-----~~~~~~ 114 (229)
T cd07477 49 IIAALDNG---------VGVVGVAPEADLYAVKVLNDDGSGTYSDIIAGIEWAIENGMDIINMSLGGPS-----DSPALR 114 (229)
T ss_pred HHhcccCC---------CccEeeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEECCccCC-----CCHHHH
Confidence 99997632 2457999999999999998776 67789999999999999999999999873 345566
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCc--cCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEe
Q 036830 309 IGALHAQQRGVVVICSAGNDGPYPFTV--ANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAY 386 (760)
Q Consensus 309 ~a~~~a~~~Gi~vV~AAGN~G~~~~~~--~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 386 (760)
.++..+.++|+++|+||||++...... ++..+++|+||+++.+
T Consensus 115 ~~~~~a~~~giliv~aaGN~~~~~~~~~~pa~~~~vi~Vga~~~~----------------------------------- 159 (229)
T cd07477 115 EAIKKAYAAGILVVAAAGNSGNGDSSYDYPAKYPSVIAVGAVDSN----------------------------------- 159 (229)
T ss_pred HHHHHHHHCCCEEEEecCCCCCCCCCccCCCCCCCEEEEEeecCC-----------------------------------
Confidence 777889999999999999999776654 7788999999986532
Q ss_pred cccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcC
Q 036830 387 GKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSN 466 (760)
Q Consensus 387 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 466 (760)
T Consensus 160 -------------------------------------------------------------------------------- 159 (229)
T cd07477 160 -------------------------------------------------------------------------------- 159 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccc
Q 036830 467 KNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSM 546 (760)
Q Consensus 467 ~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSm 546 (760)
+.++.||++|+.. |+.|||.+|+++++. +.|..++||||
T Consensus 160 -------------------~~~~~~s~~g~~~--------~~~apg~~i~~~~~~--------------~~~~~~~GTS~ 198 (229)
T cd07477 160 -------------------NNRASFSSTGPEV--------ELAAPGVDILSTYPN--------------NDYAYLSGTSM 198 (229)
T ss_pred -------------------CCcCCccCCCCCc--------eEEeCCCCeEEecCC--------------CCEEEEccHHH
Confidence 3456899999976 999999999999876 67899999999
Q ss_pred hhhhHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 036830 547 ACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577 (760)
Q Consensus 547 AaP~VAG~aALl~q~~P~ls~~~ik~~L~~T 577 (760)
|||+|||++|||+|++|++++.+||++|++|
T Consensus 199 Aap~vag~~All~~~~~~~~~~~i~~~l~~t 229 (229)
T cd07477 199 ATPHVAGVAALVWSKRPELTNAQVRQALNKT 229 (229)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999999986
|
This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thoug |
| >cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=357.77 Aligned_cols=261 Identities=27% Similarity=0.322 Sum_probs=183.0
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|||||+|||.+||+|.+.. +...+|.+. ....|..+|||||
T Consensus 7 G~gv~VaVlDsGv~~~hp~l~~~~---------------------------~~~~~~~~~-------~~~~d~~gHGT~V 52 (297)
T cd07480 7 GAGVRVAVLDTGIDLTHPAFAGRD---------------------------ITTKSFVGG-------EDVQDGHGHGTHC 52 (297)
T ss_pred CCCCEEEEEcCCCCCCChhhcCCc---------------------------ccCcccCCC-------CCCCCCCCcHHHH
Confidence 999999999999999999997421 111222221 2356789999999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCC--------
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNS-------- 298 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~-------- 298 (760)
||||+|+..+ +...||||+|+|+.+|++...+ .....+++||+|+++.|++|||||||....
T Consensus 53 Agiiag~~~~---------~~~~GvAp~a~i~~~~~~~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~ 123 (297)
T cd07480 53 AGTIFGRDVP---------GPRYGVARGAEIALIGKVLGDGGGGDGGILAGIQWAVANGADVISMSLGADFPGLVDQGWP 123 (297)
T ss_pred HHHHhcccCC---------CcccccCCCCEEEEEEEEeCCCCCcHHHHHHHHHHHHHcCCCEEEeccCCCCcccccccCC
Confidence 9999998643 3346999999999999987655 777789999999999999999999998631
Q ss_pred CCCCCCcHHHHHHHHH---------------HhCCcEEEEecCCCCCCCCCcc-----CCCCceEEeccccccccceeeE
Q 036830 299 EADYMNDPIAIGALHA---------------QQRGVVVICSAGNDGPYPFTVA-----NTAPWLFTVAASTIDRDFQSTV 358 (760)
Q Consensus 299 ~~~~~~~~~~~a~~~a---------------~~~Gi~vV~AAGN~G~~~~~~~-----~~~p~vitVgA~~~~~~~~~~~ 358 (760)
........+......+ .++|++||+||||+|....... ...+++++|+++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~gvlvV~aAGN~g~~~~~~~~~~~~~~~~~~~~V~~V~~~------- 196 (297)
T cd07480 124 PGLAFSRALEAYRQRARLFDALMTLVAAQAALARGTLIVAAAGNESQRPAGIPPVGNPAACPSAMGVAAVGAL------- 196 (297)
T ss_pred CCchhHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCceEEEecCCCCCCCCCCCCccCccccccccEEEEECCC-------
Confidence 1111122233333333 6899999999999986543221 112333444332211
Q ss_pred EeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCC
Q 036830 359 LLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKI 438 (760)
Q Consensus 359 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~ 438 (760)
T Consensus 197 -------------------------------------------------------------------------------- 196 (297)
T cd07480 197 -------------------------------------------------------------------------------- 196 (297)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEee
Q 036830 439 WPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAA 518 (760)
Q Consensus 439 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa 518 (760)
+....|+++.+ ....||||+|||++|+++
T Consensus 197 -----------------------------------------------~~~~~~~~~~~----~~~~~~dv~ApG~~i~s~ 225 (297)
T cd07480 197 -----------------------------------------------GRTGNFSAVAN----FSNGEVDIAAPGVDIVSA 225 (297)
T ss_pred -----------------------------------------------CCCCCccccCC----CCCCceEEEeCCCCeEee
Confidence 11112233222 223578999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCC
Q 036830 519 IVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANP 598 (760)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~ 598 (760)
.+. +.|..++|||||||+|||++||++|++|.+++.+++.+|+........ .........
T Consensus 226 ~~~--------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~ 285 (297)
T cd07480 226 APG--------------GGYRSMSGTSMATPHVAGVAALWAEALPKAGGRALAALLQARLTAART------TQFAPGLDL 285 (297)
T ss_pred cCC--------------CcEEEeCcHHHHHHHHHHHHHHHHHhCcccCHHHHHHHHHHHHhhccc------CCCCCCCCh
Confidence 876 789999999999999999999999999999998888887743221100 001234566
Q ss_pred CCCCCcccCcc
Q 036830 599 HEMGAGEINPL 609 (760)
Q Consensus 599 ~~~G~G~vn~~ 609 (760)
..+|+|++++.
T Consensus 286 ~~~g~G~~~~~ 296 (297)
T cd07480 286 PDRGVGLGLAP 296 (297)
T ss_pred hhcCCceeecC
Confidence 77899999875
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=351.67 Aligned_cols=245 Identities=21% Similarity=0.144 Sum_probs=178.1
Q ss_pred cccccccC---CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCC
Q 036830 140 FNHKYHKA---ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGS 216 (760)
Q Consensus 140 ~~~~~~~~---G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 216 (760)
+.++|+.. |+||+|+|||+|||.+||+|.+.... .. .. ..
T Consensus 4 ~~~aw~~~~g~G~gV~VaviDtGid~~Hpdl~~~~~~--------------------------~~----~~-------~~ 46 (277)
T cd04843 4 ARYAWTKPGGSGQGVTFVDIEQGWNLNHEDLVGNGIT--------------------------LI----SG-------LT 46 (277)
T ss_pred hHHHHHhcCCCCCcEEEEEecCCCCCCChhhcccccc--------------------------cc----CC-------CC
Confidence 67889875 79999999999999999999742110 00 00 11
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh----CCCcEEEec
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH----DGVDIISIS 292 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~----~g~dVIN~S 292 (760)
+.|.++|||||||||||..+ +..+.||||+|+|+.+|++. .++++++|++|++ .++.+||||
T Consensus 47 ~~d~~gHGT~VAGiIaa~~n---------~~G~~GvAp~a~l~~i~v~~-----~~~~~~ai~~A~~~~~~~~v~~in~s 112 (277)
T cd04843 47 DQADSDHGTAVLGIIVAKDN---------GIGVTGIAHGAQAAVVSSTR-----VSNTADAILDAADYLSPGDVILLEMQ 112 (277)
T ss_pred CCCCCCCcchhheeeeeecC---------CCceeeeccCCEEEEEEecC-----CCCHHHHHHHHHhccCCCCEEEEEcc
Confidence 45778999999999998742 11247999999999999985 3356667777766 456789999
Q ss_pred ccCCCCCCC----CCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCc------------c-CCCCceEEeccccccccce
Q 036830 293 IGLSNSEAD----YMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTV------------A-NTAPWLFTVAASTIDRDFQ 355 (760)
Q Consensus 293 lG~~~~~~~----~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~------------~-~~~p~vitVgA~~~~~~~~ 355 (760)
||....... .....+..++.++.++|++||+||||++...... + ...|++|+|||++.+.
T Consensus 113 ~g~~~~~~~~~p~~~~~~~~~av~~a~~~G~~vV~AAGN~~~~~~~~~~~~g~~~~~~~~~~~~~~vI~VgA~~~~~--- 189 (277)
T cd04843 113 TGGPNNGYPPLPVEYEQANFDAIRTATDLGIIVVEAAGNGGQDLDAPVYNRGPILNRFSPDFRDSGAIMVGAGSSTT--- 189 (277)
T ss_pred ccCCCcCcccCcchhhHHHHHHHHHHHhCCcEEEEeCCCCCccccCcccccccccccCCcCcCCCCeEEEEeccCCC---
Confidence 998741111 1234556678889999999999999998642211 1 1235688888754320
Q ss_pred eeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCC
Q 036830 356 STVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDD 435 (760)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~ 435 (760)
T Consensus 190 -------------------------------------------------------------------------------- 189 (277)
T cd04843 190 -------------------------------------------------------------------------------- 189 (277)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceE
Q 036830 436 EKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAV 515 (760)
Q Consensus 436 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I 515 (760)
...++.||++|+.. ||.|||++|
T Consensus 190 -------------------------------------------------~~~~~~fSn~G~~v--------di~APG~~i 212 (277)
T cd04843 190 -------------------------------------------------GHTRLAFSNYGSRV--------DVYGWGENV 212 (277)
T ss_pred -------------------------------------------------CCccccccCCCCcc--------ceEcCCCCe
Confidence 12268999999987 999999999
Q ss_pred EeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHH----h-CCCCCHHHHHHHHHhccc
Q 036830 516 LAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKS----V-RRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 516 ~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~-~P~ls~~~ik~~L~~TA~ 579 (760)
+++....... ......+.|..++|||||||||||++|||++ + +|+|+++|||++|+.|++
T Consensus 213 ~s~~~~~~~~----~~~~~~~~~~~~sGTS~AaP~VaG~aALl~s~~~~~~~p~lt~~~v~~~L~~t~~ 277 (277)
T cd04843 213 TTTGYGDLQD----LGGENQDYTDSFSGTSSASPIVAGAAASIQGIAKQKGGTPLTPIEMRELLTATGT 277 (277)
T ss_pred EecCCCCccc----ccCCCCcceeeecccchhhHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHhcCC
Confidence 9998653210 0111113457899999999999999999975 3 499999999999999974
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=343.09 Aligned_cols=216 Identities=23% Similarity=0.278 Sum_probs=167.4
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCC-CCCCCCCCCCCCccch
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTN-KDNSGSSRDPLGHGTH 226 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~-~~~~~~~~d~~gHGTh 226 (760)
+++|+|||||||||++||+|.+. ...+.+| ...... ........|..|||||
T Consensus 2 ~~~V~VaVIDsGvd~~hpdl~~~------------i~~~~~~---------------~~~~~~~~~~~~~~~d~~gHGT~ 54 (247)
T cd07491 2 LKRIKVALIDDGVDILDSDLQGK------------IIGGKSF---------------SPYEGDGNKVSPYYVSADGHGTA 54 (247)
T ss_pred CCCCEEEEECCCcCCCchhhccc------------cccCCCC---------------CCCCCCcccCCCCCCCCCCcHHH
Confidence 68999999999999999999742 1111122 111000 0001223568899999
Q ss_pred hhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-------CCHHHHHHHHHHHHhCCCcEEEecccCCCCC
Q 036830 227 TASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-------CSGAAILQAIDDAIHDGVDIISISIGLSNSE 299 (760)
Q Consensus 227 VAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-------~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~ 299 (760)
|||||+ |+||+|+|+.+|++...+ ++...+++||+||+++|+||||||||.....
T Consensus 55 vAgiI~------------------gvap~a~i~~~kv~~~~~~~~~~~~~~~~~i~~Ai~~Ai~~gadIIn~S~g~~~~~ 116 (247)
T cd07491 55 MARMIC------------------RICPSAKLYVIKLEDRPSPDSNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPE 116 (247)
T ss_pred HHHHHH------------------HHCCCCeEEEEEecccCCCCCcccccCHHHHHHHHHHHHHCCCcEEEeeeeccccc
Confidence 999997 789999999999997643 4567899999999999999999999987410
Q ss_pred -CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-Cc--cCCCCceEEeccccccccceeeEEeCCCeeEeeeeeeccc
Q 036830 300 -ADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-TV--ANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375 (760)
Q Consensus 300 -~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~--~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 375 (760)
.......+..++.+|.++|++||+||||+|.... .+ +...|++|+|||++.+
T Consensus 117 ~~~~~~~~l~~ai~~A~~~GilvvaaAGN~g~~~~~~~~~pa~~~~Vi~VgA~~~~------------------------ 172 (247)
T cd07491 117 DNDNDINELENAIKEALDRGILLFCSASDQGAFTGDTYPPPAARDRIFRIGAADED------------------------ 172 (247)
T ss_pred ccccchHHHHHHHHHHHhCCeEEEEecCCCCCcCCCcccCcccCCCeEEEEeeCCC------------------------
Confidence 0112567788889999999999999999997654 33 4566899999986543
Q ss_pred CCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhh
Q 036830 376 LSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVA 455 (760)
Q Consensus 376 ~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~ 455 (760)
T Consensus 173 -------------------------------------------------------------------------------- 172 (247)
T cd07491 173 -------------------------------------------------------------------------------- 172 (247)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCC
Q 036830 456 GFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKP 535 (760)
Q Consensus 456 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~ 535 (760)
+.++.||++|+.. |+.|||++|+++.+... .
T Consensus 173 ------------------------------g~~~~~S~~g~~v--------d~~APG~~i~s~~~~~~-----------~ 203 (247)
T cd07491 173 ------------------------------GGADAPVGDEDRV--------DYILPGENVEARDRPPL-----------S 203 (247)
T ss_pred ------------------------------CCCccccCCCCcc--------eEEeCCCceecCCcCCC-----------C
Confidence 3457899999987 99999999999865211 1
Q ss_pred CcceeeecccchhhhHHHHHHHHHHh
Q 036830 536 ATYALRSGTSMACPHVTGAAAFIKSV 561 (760)
Q Consensus 536 ~~y~~~sGTSmAaP~VAG~aALl~q~ 561 (760)
+.|..++|||||||||||++||+++.
T Consensus 204 ~~~~~~sGTS~Atp~vaGvaAL~l~~ 229 (247)
T cd07491 204 NSFVTHTGSSVATALAAGLAALILYC 229 (247)
T ss_pred CCeeeeccHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-41 Score=354.45 Aligned_cols=277 Identities=33% Similarity=0.476 Sum_probs=209.9
Q ss_pred EEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhc
Q 036830 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTA 231 (760)
Q Consensus 152 ~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ 231 (760)
+|||||||||++||+|....+ ...++.+.+.|.+... ......|..+|||||||||
T Consensus 1 ~V~viDtGid~~h~~~~~~~~---------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~HGT~va~ii 56 (282)
T PF00082_consen 1 KVAVIDTGIDPNHPDFSSGNF---------------------IWSKVPGGYNFVDGNP---NPSPSDDDNGHGTHVAGII 56 (282)
T ss_dssp EEEEEESBBTTTSTTTTCTTE---------------------EEEEEEEEEETTTTBS---TTTSSSTSSSHHHHHHHHH
T ss_pred CEEEEcCCcCCCChhHccCCc---------------------ccccccceeeccCCCC---CcCccccCCCccchhhhhc
Confidence 699999999999999972110 0123333444443321 1245677889999999999
Q ss_pred ccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHH-hCCCcEEEecccCCCC-CCCCCCcHHHH
Q 036830 232 AGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAI-HDGVDIISISIGLSNS-EADYMNDPIAI 309 (760)
Q Consensus 232 Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~-~~g~dVIN~SlG~~~~-~~~~~~~~~~~ 309 (760)
+|.. . . ......|+||+|+|+.+|++...+....+++++|++++ +.+++|||||||.... ......+.+..
T Consensus 57 ~~~~-~-~-----~~~~~~Gva~~a~l~~~~i~~~~~~~~~~~~~ai~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~ 129 (282)
T PF00082_consen 57 AGNG-G-N-----NGPGINGVAPNAKLYSYKIFDNSGGTSSDLIEAIEYAVKNDGVDVINLSFGSNSGPPDPSYSDILEE 129 (282)
T ss_dssp HHTT-S-S-----SSSSETCSSTTSEEEEEECSSTTSEEHHHHHHHHHHHHHHTTSSEEEECEEBEESSSHSHHHHHHHH
T ss_pred cccc-c-c-----cccccccccccccccccccccccccccccccchhhhhhhccCCcccccccccccccccccccccccc
Confidence 9986 2 1 12334799999999999998776677888999999999 8999999999998310 11123344566
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCC---ccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEe
Q 036830 310 GALHAQQRGVVVICSAGNDGPYPFT---VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAY 386 (760)
Q Consensus 310 a~~~a~~~Gi~vV~AAGN~G~~~~~---~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 386 (760)
+++.+.++|+++|+||||+|..... .++..+++|+||+++..
T Consensus 130 ~~~~~~~~g~l~v~aaGN~~~~~~~~~~~Pa~~~~vi~Vg~~~~~----------------------------------- 174 (282)
T PF00082_consen 130 AIDYAEKKGILIVFAAGNNGPNDDRNISFPASSPNVITVGAVDNN----------------------------------- 174 (282)
T ss_dssp HHHHHHHTTEEEEEE--SSSSBTTBTGEBTTTSTTSEEEEEEETT-----------------------------------
T ss_pred ccccccccCcceeeccccccccccccccccccccccccccccccc-----------------------------------
Confidence 6778999999999999999876653 45666889999975421
Q ss_pred cccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcC
Q 036830 387 GKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSN 466 (760)
Q Consensus 387 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 466 (760)
T Consensus 175 -------------------------------------------------------------------------------- 174 (282)
T PF00082_consen 175 -------------------------------------------------------------------------------- 174 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccc
Q 036830 467 KNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSM 546 (760)
Q Consensus 467 ~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSm 546 (760)
+.++.||++|+.. .++++||||+|||.+|.+.++.... ..|..++||||
T Consensus 175 -------------------~~~~~~s~~g~~~-~~~~~~~di~a~G~~i~~~~~~~~~-----------~~~~~~~GTS~ 223 (282)
T PF00082_consen 175 -------------------GQPASYSNYGGPS-DDGRIKPDIAAPGGNILSAVPGSDR-----------GSYTSFSGTSF 223 (282)
T ss_dssp -------------------SSBSTTSSBSTTE-TTCTTCEEEEEECSSEEEEETTTES-----------EEEEEEESHHH
T ss_pred -------------------ccccccccccccc-ccccccccccccccccccccccccc-----------ccccccCcCCc
Confidence 3457899997543 2789999999999999998865210 34788999999
Q ss_pred hhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 547 ACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 547 AaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
|||+|||++||++|++|+|++.+||.+|++||++++.. .....+..||||+||+++||+
T Consensus 224 Aap~vag~~All~~~~p~~~~~~i~~~l~~ta~~~~~~--------~~~~~~~~~G~G~in~~~a~~ 282 (282)
T PF00082_consen 224 AAPVVAGAAALLLSKYPNLTPAEIKALLINTADDLGST--------NGEGYDNSYGWGLINAEKALN 282 (282)
T ss_dssp HHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHSBESSET--------TSSSSHHHHTTSBE-HHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccCcC--------CCCCCCCCccCChhCHHHHhC
Confidence 99999999999999999999999999999999987511 134566788999999999874
|
; InterPro: IPR000209 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase families S8 (subfamilies S8A (subtilisin) and S8B (kexin)) and S53 (sedolisin) both of which are members of clan SB. The subtilisin family is the second largest serine protease family characterised to date. Over 200 subtilises are presently known, more than 170 of which with their complete amino acid sequence []. It is widespread, being found in eubacteria, archaebacteria, eukaryotes and viruses []. The vast majority of the family are endopeptidases, although there is an exopeptidase, tripeptidyl peptidase [, ]. Structures have been determined for several members of the subtilisin family: they exploit the same catalytic triad as the chymotrypsins, although the residues occur in a different order (HDS in chymotrypsin and DHS in subtilisin), but the structures show no other similarity [, ]. Some subtilisins are mosaic proteins, while others contain N- and C-terminal extensions that show no sequence similarity to any other known protein []. Based on sequence homology, a subdivision into six families has been proposed []. The proprotein-processing endopeptidases kexin, furin and related enzymes form a distinct subfamily known as the kexin subfamily (S8B). These preferentially cleave C-terminally to paired basic amino acids. Members of this subfamily can be identified by subtly different motifs around the active site [, ]. Members of the kexin family, along with endopeptidases R, T and K from the yeast Tritirachium and cuticle-degrading peptidase from Metarhizium, require thiol activation. This can be attributed to the presence of Cys-173 near to the active histidine [].Only 1 viral member of the subtilisin family is known, a 56kDa protease from herpes virus 1, which infects the channel catfish []. Sedolisins (serine-carboxyl peptidases) are proteolytic enzymes whose fold resembles that of subtilisin; however, they are considerably larger, with the mature catalytic domains containing approximately 375 amino acids. The defining features of these enzymes are a unique catalytic triad, Ser-Glu-Asp, as well as the presence of an aspartic acid residue in the oxyanion hole. High-resolution crystal structures have now been solved for sedolisin from Pseudomonas sp. 101, as well as for kumamolisin from a thermophilic bacterium, Bacillus sp. MN-32. Mutations in the human gene leads to a fatal neurodegenerative disease []. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3EIF_A 1XF1_B 3F7M_A 3F7O_B 2QTW_B 2W2O_A 3GCX_A 3P5B_A 3M0C_B 2XTJ_A .... |
| >cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=330.88 Aligned_cols=221 Identities=24% Similarity=0.281 Sum_probs=174.9
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhh
Q 036830 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAS 229 (760)
Q Consensus 150 Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAG 229 (760)
||+|||||||||++||+|.+.... +..|. ...+.. ......|..||||||||
T Consensus 1 gV~VaViDsGi~~~h~~l~~~~~~------------~~~~~---------~~~~~~-------~~~~~~d~~gHGT~vAg 52 (222)
T cd07492 1 GVRVAVIDSGVDTDHPDLGNLALD------------GEVTI---------DLEIIV-------VSAEGGDKDGHGTACAG 52 (222)
T ss_pred CCEEEEEeCCCCCCChhhhccccc------------ccccc---------cccccc-------CCCCCCCCCCcHHHHHH
Confidence 799999999999999999752110 00110 000000 12445678999999999
Q ss_pred hcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHH
Q 036830 230 TAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIA 308 (760)
Q Consensus 230 i~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~ 308 (760)
||++ .+|+++|+.+|+++..+ +..+.+++||+|+++++++|||||||... ......+.
T Consensus 53 iia~------------------~~p~~~i~~~~v~~~~~~~~~~~~~~ai~~a~~~~v~Vin~S~G~~~---~~~~~~~~ 111 (222)
T cd07492 53 IIKK------------------YAPEAEIGSIKILGEDGRCNSFVLEKALRACVENDIRIVNLSLGGPG---DRDFPLLK 111 (222)
T ss_pred HHHc------------------cCCCCeEEEEEEeCCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC---CCcCHHHH
Confidence 9984 46999999999998776 88899999999999999999999999874 12335667
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecc
Q 036830 309 IGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGK 388 (760)
Q Consensus 309 ~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~ 388 (760)
.++.++.++|+++|+||||++.... .++..+++|+|++.+.+.
T Consensus 112 ~~~~~a~~~g~l~V~aagN~~~~~~-~Pa~~~~vi~V~~~~~~~------------------------------------ 154 (222)
T cd07492 112 ELLEYAYKAGGIIVAAAPNNNDIGT-PPASFPNVIGVKSDTADD------------------------------------ 154 (222)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCC-CCccCCceEEEEecCCCC------------------------------------
Confidence 7788889999999999999986543 367778999999754221
Q ss_pred cccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCC
Q 036830 389 AIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKN 468 (760)
Q Consensus 389 ~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 468 (760)
T Consensus 155 -------------------------------------------------------------------------------- 154 (222)
T cd07492 155 -------------------------------------------------------------------------------- 154 (222)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchh
Q 036830 469 PTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548 (760)
Q Consensus 469 ~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAa 548 (760)
.. +.+++ ++|+.|||.+|+++.+. +.|..++||||||
T Consensus 155 ------------------~~---~~~~~--------~~~~~apg~~i~~~~~~--------------~~~~~~~GTS~Aa 191 (222)
T cd07492 155 ------------------PK---SFWYI--------YVEFSADGVDIIAPAPH--------------GRYLTVSGNSFAA 191 (222)
T ss_pred ------------------Cc---ccccC--------CceEEeCCCCeEeecCC--------------CCEEEeccHHHHH
Confidence 00 11233 34999999999999876 6799999999999
Q ss_pred hhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 549 P~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
|+|||++|||+|++|+|+++|||++|+.||+
T Consensus 192 p~vaG~~All~~~~p~l~~~~v~~~L~~tA~ 222 (222)
T cd07492 192 PHVTGMVALLLSEKPDIDANDLKRLLQRLAV 222 (222)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999985
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=346.13 Aligned_cols=255 Identities=29% Similarity=0.344 Sum_probs=177.0
Q ss_pred CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCC-CCCCCCCCCCCCCCCccchhh
Q 036830 150 DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRA-STNKDNSGSSRDPLGHGTHTA 228 (760)
Q Consensus 150 Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~-~~~~~~~~~~~d~~gHGThVA 228 (760)
.|+|||||||||++||+|.+.-... .+ .+ .....+... ...........|..|||||||
T Consensus 1 ~V~VaviDtGi~~~hp~l~~~~~~~----~~-------~~---------~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vA 60 (294)
T cd07482 1 KVTVAVIDSGIDPDHPDLKNSISSY----SK-------NL---------VPKGGYDGKEAGETGDINDIVDKLGHGTAVA 60 (294)
T ss_pred CcEEEEEeCCCCCCChhHhhccccc----cc-------cc---------ccCCCcCCccccccCCCCcCCCCCCcHhHHH
Confidence 3899999999999999998521100 00 00 000000000 000011234567899999999
Q ss_pred hhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCC------C
Q 036830 229 STAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEA------D 301 (760)
Q Consensus 229 Gi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~------~ 301 (760)
|+|+|+.. ..||||+|+|+.+|+++..+ ....+++++|+||++++++|||||||...... .
T Consensus 61 giia~~~~------------~~GvAp~a~i~~~~v~~~~~~~~~~~~~~ai~~a~~~~~~vin~S~G~~~~~~~~~~~~~ 128 (294)
T cd07482 61 GQIAANGN------------IKGVAPGIGIVSYRVFGSCGSAESSWIIKAIIDAADDGVDVINLSLGGYLIIGGEYEDDD 128 (294)
T ss_pred HHHhcCCC------------CceeCCCCEEEEEEeecCCCCcCHHHHHHHHHHHHHCCCCEEEeCCccCCCCCcccccch
Confidence 99998642 14999999999999998776 48899999999999999999999999864211 1
Q ss_pred CCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC----------------------CccCCCCceEEeccccccccceeeEE
Q 036830 302 YMNDPIAIGALHAQQRGVVVICSAGNDGPYPF----------------------TVANTAPWLFTVAASTIDRDFQSTVL 359 (760)
Q Consensus 302 ~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~----------------------~~~~~~p~vitVgA~~~~~~~~~~~~ 359 (760)
...+.+..++..+.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 129 ~~~~~~~~~i~~a~~~g~lvv~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vi~Vga~~~--------- 199 (294)
T cd07482 129 VEYNAYKKAINYAKSKGSIVVAAAGNDGLDVSNKQELLDFLSSGDDFSVNGEVYDVPASLPNVITVSATDN--------- 199 (294)
T ss_pred hhhHHHHHHHHHHHHCCCEEEEeCCCCCcccccccccccccccccccccCCcceecccccCceEEEEeeCC---------
Confidence 11245666777888999999999999996531 12233345555555332
Q ss_pred eCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCC
Q 036830 360 LGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIW 439 (760)
Q Consensus 360 ~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~ 439 (760)
T Consensus 200 -------------------------------------------------------------------------------- 199 (294)
T cd07482 200 -------------------------------------------------------------------------------- 199 (294)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeee
Q 036830 440 PTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAI 519 (760)
Q Consensus 440 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~ 519 (760)
.+.++.||++|+.. +|++|||+++....
T Consensus 200 ---------------------------------------------~~~~~~~S~~g~~~-------~~~~apG~~~~~~~ 227 (294)
T cd07482 200 ---------------------------------------------NGNLSSFSNYGNSR-------IDLAAPGGDFLLLD 227 (294)
T ss_pred ---------------------------------------------CCCcCccccCCCCc-------ceEECCCCCccccc
Confidence 24567899998754 49999999885332
Q ss_pred cCCCCC---CCC-----CCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCH-HHHHHHHHhc
Q 036830 520 VPRPDR---PGG-----IPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTY-SMIKSALMTT 577 (760)
Q Consensus 520 ~~~~~~---~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~-~~ik~~L~~T 577 (760)
...... ... .......+.|..++|||||||+|||++|||+|++|.+++ .|||++|++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG~aAll~~~~p~~~~~~~v~~~L~~T 294 (294)
T cd07482 228 QYGKEKWVNNGLMTKEQILTTAPEGGYAYMYGTSLAAPKVSGALALIIDKNPLKKPPDEAIRILYNT 294 (294)
T ss_pred ccCccccccccccccceeeecccCCceEeecchhhhhHHHHHHHHHHHHHCCCCCcHHHHHHHHhhC
Confidence 111000 000 001123367899999999999999999999999999999 9999999986
|
Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family h |
| >cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=346.46 Aligned_cols=250 Identities=18% Similarity=0.201 Sum_probs=181.9
Q ss_pred cccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCC
Q 036830 138 TWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSG 215 (760)
Q Consensus 138 ~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~ 215 (760)
.++..+|+.+ |+||+|+|||||||++||+|.+.... ...++|..... ..
T Consensus 26 ~~~~~~w~~g~~G~gv~VaViDtGv~~~h~~l~~~~~~-------------------------~~~~~~~~~~~----~~ 76 (297)
T cd04059 26 LNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDP-------------------------EASYDFNDNDP----DP 76 (297)
T ss_pred cccHHHHhCCCCCcceEEEEEeCCcccCCHhHhhcccc-------------------------cccccccCCCC----CC
Confidence 4477899997 99999999999999999999752111 01111221110 01
Q ss_pred CC--CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecc
Q 036830 216 SS--RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISI 293 (760)
Q Consensus 216 ~~--~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~Sl 293 (760)
.+ .|..+|||||||||+|+..+. ....||||+|+|+.+|++... .....+..++.++.+ .++||||||
T Consensus 77 ~~~~~~~~gHGT~vAgiiag~~~~~--------~~~~GvAp~a~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~Vin~S~ 146 (297)
T cd04059 77 TPRYDDDNSHGTRCAGEIAAVGNNG--------ICGVGVAPGAKLGGIRMLDGD-VTDVVEAESLGLNPD-YIDIYSNSW 146 (297)
T ss_pred CCccccccccCcceeeEEEeecCCC--------cccccccccceEeEEEecCCc-cccHHHHHHHhcccC-CceEEECCC
Confidence 12 278899999999999986432 134799999999999999765 344455666666554 459999999
Q ss_pred cCCCCCC--CCCCcHHHHHHHHHHh-----CCcEEEEecCCCCCCCCC----ccCCCCceEEeccccccccceeeEEeCC
Q 036830 294 GLSNSEA--DYMNDPIAIGALHAQQ-----RGVVVICSAGNDGPYPFT----VANTAPWLFTVAASTIDRDFQSTVLLGN 362 (760)
Q Consensus 294 G~~~~~~--~~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgA~~~~~~~~~~~~~~~ 362 (760)
|...... ......+..++.++.. +|++||+||||+|..... .....|++|+|||++.+
T Consensus 147 g~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~gilvV~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~----------- 215 (297)
T cd04059 147 GPDDDGKTVDGPGPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTAN----------- 215 (297)
T ss_pred CCCCCCCccCCCcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCCCCCCCCCcccCCCceEEEEeeCCC-----------
Confidence 9874211 1222334444555543 699999999999973222 12456889999986432
Q ss_pred CeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCC
Q 036830 363 GKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442 (760)
Q Consensus 363 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~ 442 (760)
T Consensus 216 -------------------------------------------------------------------------------- 215 (297)
T cd04059 216 -------------------------------------------------------------------------------- 215 (297)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCce-------E
Q 036830 443 RGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVA-------V 515 (760)
Q Consensus 443 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~-------I 515 (760)
+.++.||++|+.. ++.|||.. |
T Consensus 216 -------------------------------------------g~~~~~s~~g~~~--------~~~a~g~~~~~~~~~i 244 (297)
T cd04059 216 -------------------------------------------GVRASYSEVGSSV--------LASAPSGGSGNPEASI 244 (297)
T ss_pred -------------------------------------------CCCcCCCCCCCcE--------EEEecCCCCCCCCCce
Confidence 4567899999987 89999987 6
Q ss_pred EeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 516 LAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 516 ~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
+++.... ....|..++|||||||+|||++|||+|+||+|++.|||.+|++||+
T Consensus 245 ~~~~~~~-----------~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~lt~~~v~~~L~~TA~ 297 (297)
T cd04059 245 VTTDLGG-----------NCNCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALTAR 297 (297)
T ss_pred EeCCCCC-----------CCCcccccCCcchhhhhhHhHHHHhhccCCCCCHHHHHHHHHHhcC
Confidence 6654431 0156788999999999999999999999999999999999999985
|
Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation. |
| >cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=329.70 Aligned_cols=243 Identities=28% Similarity=0.309 Sum_probs=186.8
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|+|||+||+.+||+|.+...... .+ ..... .......|..+|||||
T Consensus 2 G~gv~VaiiDsG~~~~h~~l~~~~~~~~------------~~---------------~~~~~--~~~~~~~~~~~HGT~v 52 (267)
T cd04848 2 GAGVKVGVIDSGIDLSHPEFAGRVSEAS------------YY---------------VAVND--AGYASNGDGDSHGTHV 52 (267)
T ss_pred CCceEEEEEeCCCCCCCccccCcccccc------------cc---------------ccccc--ccCCCCCCCCChHHHH
Confidence 8999999999999999999985321100 00 00000 0013445688999999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC--CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCC----
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG--CSGAAILQAIDDAIHDGVDIISISIGLSNSEAD---- 301 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~---- 301 (760)
||||+|...+ ..+.|+||+|+|+.+|+++..+ .....+.++++++++.+++|||||||.......
T Consensus 53 agiiag~~~~---------~~~~GiAp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~g~~~~~~~~~~~ 123 (267)
T cd04848 53 AGVIAAARDG---------GGMHGVAPDATLYSARASASAGSTFSDADIAAAYDFLAASGVRIINNSWGGNPAIDTVSTT 123 (267)
T ss_pred HHHHhcCcCC---------CCcccCCcCCEEEEEeccCCCCcccchHHHHHHHHHHHhCCCeEEEccCCCCCcccccccc
Confidence 9999998632 4458999999999999998764 667889999999999999999999999852111
Q ss_pred ------CCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCc---------cCCCCceEEeccccccccceeeEEeCCCeeE
Q 036830 302 ------YMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTV---------ANTAPWLFTVAASTIDRDFQSTVLLGNGKAI 366 (760)
Q Consensus 302 ------~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~---------~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~ 366 (760)
.....+...+..+.++|+++|+||||++...... +...+++|+||+++.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~gi~iv~aaGN~~~~~~~~~~~~~~~~~~~~~~~vi~Vga~~~~--------------- 188 (267)
T cd04848 124 YKGSAATQGNTLLAALARAANAGGLFVFAAGNDGQANPSLAAAALPYLEPELEGGWIAVVAVDPN--------------- 188 (267)
T ss_pred hhhhccccchHHHHHHHHHhhCCeEEEEeCCCCCCCCCccccccccccCccccCCEEEEEEecCC---------------
Confidence 2456667777889999999999999998654333 2345788999986543
Q ss_pred eeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCccc
Q 036830 367 KGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGIL 446 (760)
Q Consensus 367 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~ 446 (760)
T Consensus 189 -------------------------------------------------------------------------------- 188 (267)
T cd04848 189 -------------------------------------------------------------------------------- 188 (267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceec--ccCCCCCCCCCCcccCceeeCCceEEeeecCCCC
Q 036830 447 PYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAY--FSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPD 524 (760)
Q Consensus 447 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~--fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~ 524 (760)
+.... ||++|+.. ..++++|||.+|+++.+...
T Consensus 189 ---------------------------------------~~~~~~~~s~~~~~~-----~~~~~~apG~~i~~~~~~~~- 223 (267)
T cd04848 189 ---------------------------------------GTIASYSYSNRCGVA-----ANWCLAAPGENIYSTDPDGG- 223 (267)
T ss_pred ---------------------------------------CCcccccccccchhh-----hhheeecCcCceeecccCCC-
Confidence 11223 47887643 23479999999999976311
Q ss_pred CCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 036830 525 RPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579 (760)
Q Consensus 525 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~ 579 (760)
..|..++|||||||+|||++||++|++|++++++||++|++||+
T Consensus 224 -----------~~~~~~~GTS~Aap~vaG~~Al~~~~~p~l~~~~v~~~l~~tA~ 267 (267)
T cd04848 224 -----------NGYGRVSGTSFAAPHVSGAAALLAQKFPWLTADQVRQTLLTTAT 267 (267)
T ss_pred -----------CcccccceeEchHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhcC
Confidence 67889999999999999999999999999999999999999985
|
Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface. |
| >KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=338.03 Aligned_cols=367 Identities=24% Similarity=0.333 Sum_probs=274.3
Q ss_pred CCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccc------cccceEEEeccceeeEEEEeCH-----H
Q 036830 29 EIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEES------ERLSLIHHYKHAFKGFSAILTD-----S 97 (760)
Q Consensus 29 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~y~~~~~g~s~~l~~-----~ 97 (760)
..+..|||.|+.-... ..|...+++.++..+. .+...-..|-.-|.-+-++-.. -
T Consensus 47 vve~EyIv~F~~y~~A--------------k~r~syi~skl~gS~VtnWriipR~Npa~~YPsDF~vl~i~e~~k~~~~~ 112 (1033)
T KOG4266|consen 47 VVESEYIVRFKQYKPA--------------KDRRSYIESKLRGSGVTNWRIIPRINPATKYPSDFGVLWIEESGKEAVVG 112 (1033)
T ss_pred eecceeEEEecccccc--------------hHHHHHHHHHhhcCCCCceeEeeccCccccCCCccceEEEeccCccchhh
Confidence 3567899999987654 3455566666653321 1223344555556666664432 2
Q ss_pred HHHHhcCCCCeEEEEeCcccccccC------------CCcccc-cc-------------ccCCC---------ccccccc
Q 036830 98 EASALSGHDHVVSVFPDPVLQLHTT------------RSWDFL-AA-------------AAKPA---------KNTWFNH 142 (760)
Q Consensus 98 ~i~~L~~~p~V~~V~~~~~~~~~~~------------~s~~~~-g~-------------~~~~~---------~~~~~~~ 142 (760)
++++|..+|.|+.|.|.+.+.+-.. .+..++ |. ....+ .+.+++-
T Consensus 113 ~ierLe~hp~vk~v~pqr~V~r~l~y~~~~~~p~n~t~~~~~~qg~~~~r~a~~s~~~~n~~RHl~a~~rQv~s~l~Ad~ 192 (1033)
T KOG4266|consen 113 EIERLEMHPDVKVVFPQRRVLRGLSYPDGKKRPGNITTSMSFEQGTESSRMADTSNTTLNWSRHLLAQKRQVTSMLGADH 192 (1033)
T ss_pred eeeehhcCCCceeecchhhhhhcccccccCCCCCcceeeeeccccccccCCccccccccccchhhhhhhHHHHHHhchhh
Confidence 5899999999999999887654211 000000 00 00011 1245778
Q ss_pred ccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCC
Q 036830 143 KYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDP 220 (760)
Q Consensus 143 ~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~ 220 (760)
+|+++ |++|+|||.|||+..+||.|+.- ....++ .+ .....|.
T Consensus 193 LWk~GyTGa~VkvAiFDTGl~~~HPHFrnv-------------KERTNW---------------TN-------E~tLdD~ 237 (1033)
T KOG4266|consen 193 LWKKGYTGAKVKVAIFDTGLRADHPHFRNV-------------KERTNW---------------TN-------EDTLDDN 237 (1033)
T ss_pred HHhccccCCceEEEEeecccccCCccccch-------------hhhcCC---------------cC-------ccccccC
Confidence 99999 99999999999999999999741 111112 11 1455678
Q ss_pred CCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCC
Q 036830 221 LGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSNSE 299 (760)
Q Consensus 221 ~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~ 299 (760)
.||||.|||+|||.. ...|.||+++|+++|||.+.. ...+..++|+.||+....||+|+|+|++
T Consensus 238 lgHGTFVAGvia~~~------------ec~gfa~d~e~~~frvft~~qVSYTSWFLDAFNYAI~~kidvLNLSIGGP--- 302 (1033)
T KOG4266|consen 238 LGHGTFVAGVIAGRN------------ECLGFASDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATKIDVLNLSIGGP--- 302 (1033)
T ss_pred cccceeEeeeeccch------------hhcccCCccceeEEEeeccceeehhhHHHHHHHHHHhhhcceEeeccCCc---
Confidence 999999999999874 236999999999999998776 8889999999999999999999999998
Q ss_pred CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCC--CceEEeccccccccceeeEEeCCCeeEeeeeeecccCC
Q 036830 300 ADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTA--PWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLS 377 (760)
Q Consensus 300 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~--p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 377 (760)
++.+.++-.-+-...+..|++|.|+||+||-.++..+++ ..||.||..+.
T Consensus 303 -DfmD~PFVeKVwEltAnNvIMvSAiGNDGPLYGTLNNPaDQsDViGVGGIdf--------------------------- 354 (1033)
T KOG4266|consen 303 -DFMDLPFVEKVWELTANNVIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDF--------------------------- 354 (1033)
T ss_pred -ccccchHHHHHHhhccCcEEEEEecCCCCcceeecCCcccccceeeeccccc---------------------------
Confidence 478888776677888999999999999999999888766 36677764321
Q ss_pred CCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHH
Q 036830 378 RSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGF 457 (760)
Q Consensus 378 ~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~ 457 (760)
T Consensus 355 -------------------------------------------------------------------------------- 354 (1033)
T KOG4266|consen 355 -------------------------------------------------------------------------------- 354 (1033)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCC----CCCcccCceeeCCceEEeeecCCCCCCCCCCCCC
Q 036830 458 RIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLP----TENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE 533 (760)
Q Consensus 458 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~----~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~ 533 (760)
.+.+|.|||||-+.+ ..||+||||++-|.+|......
T Consensus 355 ---------------------------dD~IA~FSSRGMtTWELP~GYGRmkpDiVtYG~~v~GS~v~------------ 395 (1033)
T KOG4266|consen 355 ---------------------------DDHIASFSSRGMTTWELPHGYGRMKPDIVTYGRDVMGSKVS------------ 395 (1033)
T ss_pred ---------------------------cchhhhhccCCcceeecCCcccccCCceEeeccccccCccc------------
Confidence 267899999997654 3789999999999999876544
Q ss_pred CCCcceeeecccchhhhHHHHHHHHHH----hCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCcc
Q 036830 534 KPATYALRSGTSMACPHVTGAAAFIKS----VRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPL 609 (760)
Q Consensus 534 ~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~ 609 (760)
.+...+||||.|+|.|||+++|+.+ +.--+.|+.+|++|+.+|.++.. ..-+.||+|++|+.
T Consensus 396 --~GCr~LSGTSVaSPVVAGav~LLvS~~~qk~dl~NPASmKQaLiegA~kLpg------------~NMfEQGaGkldLL 461 (1033)
T KOG4266|consen 396 --TGCRSLSGTSVASPVVAGAVCLLVSVEAQKKDLLNPASMKQALIEGAAKLPG------------PNMFEQGAGKLDLL 461 (1033)
T ss_pred --ccchhccCCcccchhhhceeeeEeeeheehhhccCHHHHHHHHHhHHhhCCC------------CchhhccCcchhHH
Confidence 6788999999999999999999966 33456899999999999998732 34578999999999
Q ss_pred ccCCCceeeec
Q 036830 610 KALNPGLVFKT 620 (760)
Q Consensus 610 ~Al~~~l~~~~ 620 (760)
++++--+-|.+
T Consensus 462 ~syqiL~SYkP 472 (1033)
T KOG4266|consen 462 ESYQILKSYKP 472 (1033)
T ss_pred HHHHHHHhcCC
Confidence 99874444544
|
|
| >KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=308.82 Aligned_cols=359 Identities=24% Similarity=0.255 Sum_probs=232.4
Q ss_pred CCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCC-C--CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 220 PLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEG-G--CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 220 ~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~-g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
...|||||||||+|+..+.. ...||||+|+|+++++.+.. | -+...+.+|+..++++.+||||||+|-+
T Consensus 309 Sg~HGTHVAgIa~anhpe~p--------~~NGvAPgaqIvSl~IGD~RLgsMETgtaltRA~~~v~e~~vDiINmSyGE~ 380 (1304)
T KOG1114|consen 309 SGPHGTHVAGIAAANHPETP--------ELNGVAPGAQIVSLKIGDGRLGSMETGTALTRAMIEVIEHNVDIINMSYGED 380 (1304)
T ss_pred CCCCcceehhhhccCCCCCc--------cccCCCCCCEEEEEEecCccccccccchHHHHHHHHHHHhcCCEEEeccCcc
Confidence 45699999999999985432 34699999999999997643 2 4556789999999999999999999988
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCC---CCceEEeccccccccceeeEEeCCCeeEeeeeeec
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANT---APWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISL 373 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~---~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~ 373 (760)
. ..+.....++..-+.+.++|+++|+||||+||.-.+++.+ ...+|.|||.-.....
T Consensus 381 a-~~pn~GRviEl~~e~vnKr~vI~VsSAGN~GPaltTVGaPggtTssvIgVGAYVsp~mm------------------- 440 (1304)
T KOG1114|consen 381 A-HLPNSGRVIELLRELVNKRGVIYVSSAGNNGPALTTVGAPGGTTSSVIGVGAYVSPGMM------------------- 440 (1304)
T ss_pred C-CCCCcchHHHHHHHHhhhccEEEEEeCCCCCCceeeccCCCCcccceEeeeeecCHHHH-------------------
Confidence 6 3333345555555566689999999999999998887753 3588999885221100
Q ss_pred ccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEech
Q 036830 374 SNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGK 453 (760)
Q Consensus 374 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~ 453 (760)
T Consensus 441 -------------------------------------------------------------------------------- 440 (1304)
T KOG1114|consen 441 -------------------------------------------------------------------------------- 440 (1304)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCC
Q 036830 454 VAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE 533 (760)
Q Consensus 454 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~ 533 (760)
...+... ..-......+|||||+. ||-+--.|+|||+.|.+--.-..
T Consensus 441 ---~a~y~~~------------------e~vp~~~YtWsSRgP~~--DG~lGVsi~APggAiAsVP~~tl---------- 487 (1304)
T KOG1114|consen 441 ---QAEYSVR------------------EPVPSNPYTWSSRGPCL--DGDLGVSISAPGGAIASVPQYTL---------- 487 (1304)
T ss_pred ---Hhhhhhh------------------ccCCCCccccccCCCCc--CCCcceEEecCCccccCCchhhh----------
Confidence 0000000 01124478899999998 89999999999999976521111
Q ss_pred CCCcceeeecccchhhhHHHHHHHHHH----hCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCcc
Q 036830 534 KPATYALRSGTSMACPHVTGAAAFIKS----VRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPL 609 (760)
Q Consensus 534 ~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~ 609 (760)
..-..|.|||||+|+++|.+|||++ .+-.|||..||.+|++||++++. ..++.+|.|+|+++
T Consensus 488 --q~~qLMNGTSMsSP~acG~IAllLSgLKa~ni~ytpysVrrAlenTa~~l~~------------id~faqG~GmlqVd 553 (1304)
T KOG1114|consen 488 --QNSQLMNGTSMSSPSACGAIALLLSGLKAQNIPYTPYSVRRALENTATKLGD------------IDSFAQGQGMLQVD 553 (1304)
T ss_pred --hhhhhhCCcccCCccccchHHHHHHHHHhcCCCCcHHHHHHHHHhcccccCc------------cchhccCcceeehh
Confidence 5567899999999999999999955 56789999999999999997732 36788999999999
Q ss_pred ccCCCceeeecChhhHHhhhhhcCCCccceeccccccccCCCCCCcccccCcCCCcEEEeecccCceeEEEEE--EEEec
Q 036830 610 KALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKR--TVTNV 687 (760)
Q Consensus 610 ~Al~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~t~~r--tv~N~ 687 (760)
+|.+ |-.+. -..|...+|. |..-.|. +|...--.-.+-..+-|+ ..++.+ .+.|-
T Consensus 554 kAyE----yL~q~--~~~f~~~l~f----~~v~VgN--~~srGIyLRep~~~~~p~-----------e~~i~VePiF~~~ 610 (1304)
T KOG1114|consen 554 KAYE----YLAQS--DFSFPNALGF----INVNVGN--SCSRGIYLREPTQVCSPS-----------EHTIGVEPIFENG 610 (1304)
T ss_pred HHHH----HHHHh--hhcCCcccee----EEEeecc--ccccceEecCCcccCCcc-----------ccceeccccccCc
Confidence 9976 21111 0112222221 0001111 121100000000000000 011111 01111
Q ss_pred CC---CCeEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEEecCCCCceEEEEEEEC-----CceEEEEEEEEE
Q 036830 688 GS---PNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSD-----DRHSVRMMFAVD 758 (760)
Q Consensus 688 ~~---~~~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~~-----~~~~v~~P~~~~ 758 (760)
-. ....|.+.+..-..-.+.-.|+.|-+ .++.+.+.|+|++.....+.+++.|.--| .++..|||+.|.
T Consensus 611 ~e~~keki~Fe~~L~L~st~pwVq~p~~l~l--~~~~R~i~VrVDpt~l~~G~hy~eV~gyD~~~p~~gplFrIPVTVi 687 (1304)
T KOG1114|consen 611 EENEKEKISFEVQLSLASTQPWVQCPEYLML--ANQGRGINVRVDPTGLAPGVHYTEVLGYDTANPSRGPLFRIPVTVI 687 (1304)
T ss_pred cccccccccceeeEeeecCCcceeCchhhee--ccCCceeEEEECCcCCCCCcceEEEEEeecCCcccCceEEeeeEEE
Confidence 10 11222222222111113345777777 45677899999998888888889888654 278999999875
|
|
| >cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=288.57 Aligned_cols=195 Identities=22% Similarity=0.190 Sum_probs=143.1
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHH--HhCCCcEEEeccc
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDA--IHDGVDIISISIG 294 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a--~~~g~dVIN~SlG 294 (760)
..|.++|||||||||||.. |++|+++|+..++... ....+.++++|+ .+.+++|||||||
T Consensus 33 ~~~~~~HGThVAgiiag~~---------------~~~p~a~~~~~~~~~~---~~~~~~~~i~~~~~~~~gv~VINmS~G 94 (247)
T cd07488 33 NNTFDDHATLVASIMGGRD---------------GGLPAVNLYSSAFGIK---SNNGQWQECLEAQQNGNNVKIINHSYG 94 (247)
T ss_pred CCCCCCHHHHHHHHHHhcc---------------CCCCccceehhhhCCC---CCCccHHHHHHHHHhcCCceEEEeCCc
Confidence 4578999999999999874 6679999987665321 223456777888 6789999999999
Q ss_pred CCCCCCC-----CCCcHHHHHHHHHHhC-CcEEEEecCCCCCCCC-----CccCCCCceEEeccccccccceeeEEeCCC
Q 036830 295 LSNSEAD-----YMNDPIAIGALHAQQR-GVVVICSAGNDGPYPF-----TVANTAPWLFTVAASTIDRDFQSTVLLGNG 363 (760)
Q Consensus 295 ~~~~~~~-----~~~~~~~~a~~~a~~~-Gi~vV~AAGN~G~~~~-----~~~~~~p~vitVgA~~~~~~~~~~~~~~~~ 363 (760)
... ... ...+.+..+++.+.++ |+++|+||||+|.... ..+..++++|+|||++....
T Consensus 95 ~~~-~~~~~~~~~~~~~l~~aid~~a~~~GvlvV~AAGN~g~~~~~~~~i~~pa~~~nvItVGA~d~~g~---------- 163 (247)
T cd07488 95 EGL-KRDPRAVLYGYALLSLYLDWLSRNYEVINVFSAGNQGKEKEKFGGISIPTLAYNSIVVGSTDRNGD---------- 163 (247)
T ss_pred cCC-CCCccccccccchHHHHHHHHHhhCCEEEEEecCCCCCCccCCCCcCCccccCCeEEEEEecCCCC----------
Confidence 874 211 1234566677777666 9999999999997532 23456689999998754310
Q ss_pred eeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCC
Q 036830 364 KAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTER 443 (760)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~ 443 (760)
T Consensus 164 -------------------------------------------------------------------------------- 163 (247)
T cd07488 164 -------------------------------------------------------------------------------- 163 (247)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCC
Q 036830 444 GILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRP 523 (760)
Q Consensus 444 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~ 523 (760)
....+.||++|.....++..||||+|||++|++ +.
T Consensus 164 -----------------------------------------~~~~s~~sn~~~~~~~~~~~~~di~APG~~i~s--~~-- 198 (247)
T cd07488 164 -----------------------------------------RFFASDVSNAGSEINSYGRRKVLIVAPGSNYNL--PD-- 198 (247)
T ss_pred -----------------------------------------cceecccccccCCCCCCCCceeEEEEeeeeEEC--CC--
Confidence 012345566442222377899999999999998 32
Q ss_pred CCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCH------HHHHHHHHhc
Q 036830 524 DRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTY------SMIKSALMTT 577 (760)
Q Consensus 524 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~------~~ik~~L~~T 577 (760)
+.|..++|||||||||||++|||++++|.+.+ .++|.+|+.|
T Consensus 199 ------------~~~~~~sGTSmAaP~VaG~aAlll~~~p~~~~~~~~~~~~~~~~~~~~ 246 (247)
T cd07488 199 ------------GKDDFVSGTSFSAPLVTGIIALLLEFYDRQYKKGNNNLIALRALVSSS 246 (247)
T ss_pred ------------CceeeecccchHHHHHHHHHHHHHHHChhhhhCcchhHHHHHHHHhcc
Confidence 56889999999999999999999999887764 4566666655
|
This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. |
| >cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=273.43 Aligned_cols=234 Identities=31% Similarity=0.413 Sum_probs=178.0
Q ss_pred eEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhh
Q 036830 151 IVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTAST 230 (760)
Q Consensus 151 v~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi 230 (760)
|+|+|||+|++++||+|... ......+.+ +.... .......+..+||||||++
T Consensus 1 v~VaiiD~G~~~~~~~~~~~---------~~~~~~~~~---------------~~~~~---~~~~~~~~~~~HGt~va~~ 53 (241)
T cd00306 1 VTVAVIDTGVDPDHPDLDGL---------FGGGDGGND---------------DDDNE---NGPTDPDDGNGHGTHVAGI 53 (241)
T ss_pred CEEEEEeCCCCCCCcchhcc---------ccCcccccc---------------cccCc---CCCCCCCCCCCcHHHHHHH
Confidence 68999999999999987210 000000000 00000 0012345688999999999
Q ss_pred cccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHH-hCCCcEEEecccCCCCCCCCCCcHHH
Q 036830 231 AAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAI-HDGVDIISISIGLSNSEADYMNDPIA 308 (760)
Q Consensus 231 ~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~-~~g~dVIN~SlG~~~~~~~~~~~~~~ 308 (760)
+++...+. ...|+||+++|+.+|+....+ .....+++++++++ ..+++|||||||... .. ....+.
T Consensus 54 i~~~~~~~---------~~~g~a~~a~i~~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~iin~S~g~~~--~~-~~~~~~ 121 (241)
T cd00306 54 IAASANNG---------GGVGVAPGAKLIPVKVLDGDGSGSSSDIAAAIDYAAADQGADVINLSLGGPG--SP-PSSALS 121 (241)
T ss_pred HhcCCCCC---------CCEEeCCCCEEEEEEEecCCCCcCHHHHHHHHHHHHhccCCCEEEeCCCCCC--CC-CCHHHH
Confidence 99986432 226999999999999998766 67889999999999 899999999999984 11 345667
Q ss_pred HHHHHHHhC-CcEEEEecCCCCCCCC---CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeee
Q 036830 309 IGALHAQQR-GVVVICSAGNDGPYPF---TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPL 384 (760)
Q Consensus 309 ~a~~~a~~~-Gi~vV~AAGN~G~~~~---~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~ 384 (760)
..+..+.++ |+++|+|+||.+.... ..++..+++|+||+++.+.
T Consensus 122 ~~~~~~~~~~~~i~V~aaGN~~~~~~~~~~~p~~~~~vi~Vga~~~~~-------------------------------- 169 (241)
T cd00306 122 EAIDYALAKLGVLVVAAAGNDGPDGGTNIGYPAASPNVIAVGAVDRDG-------------------------------- 169 (241)
T ss_pred HHHHHHHHhcCeEEEEecCCCCCCCCCCccCCccCCceEEEEecCcCC--------------------------------
Confidence 777888888 9999999999997776 4677889999999875431
Q ss_pred EecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHh
Q 036830 385 AYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYIN 464 (760)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~ 464 (760)
T Consensus 170 -------------------------------------------------------------------------------- 169 (241)
T cd00306 170 -------------------------------------------------------------------------------- 169 (241)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCeEEEccCceeccCCCCCce-ecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeec
Q 036830 465 SNKNPTATILPTVTIPRHRPAPVV-AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSG 543 (760)
Q Consensus 465 ~~~~~~~~i~~~~~~~~~~~~~~~-a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sG 543 (760)
.. ..++++|+ |||+.|||.++.+..... ...+..++|
T Consensus 170 ----------------------~~~~~~~~~~~--------~~~~~apg~~~~~~~~~~------------~~~~~~~~G 207 (241)
T cd00306 170 ----------------------TPASPSSNGGA--------GVDIAAPGGDILSSPTTG------------GGGYATLSG 207 (241)
T ss_pred ----------------------CccCCcCCCCC--------CceEEeCcCCccCcccCC------------CCCeEeecc
Confidence 11 13444444 569999999998751111 168999999
Q ss_pred ccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 036830 544 TSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577 (760)
Q Consensus 544 TSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~T 577 (760)
||||||+|||++||++|++|++++.++|.+|++|
T Consensus 208 TS~Aap~vaG~~Al~~~~~~~~~~~~~~~~l~~t 241 (241)
T cd00306 208 TSMAAPIVAGVAALLLSANPDLTPAQVKAALLST 241 (241)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHhhC
Confidence 9999999999999999999999999999999875
|
Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members hav |
| >COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=237.69 Aligned_cols=271 Identities=28% Similarity=0.389 Sum_probs=195.9
Q ss_pred ccccccc--C--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCC
Q 036830 140 FNHKYHK--A--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSG 215 (760)
Q Consensus 140 ~~~~~~~--~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~ 215 (760)
....|.. + |+|++|+|||+||+..||+|.+.... .++|.+... ..
T Consensus 129 ~~~~~~~~~~~~g~gv~~~vid~gv~~~~~~~~~~~~~---------------------------~~~~~~~~~----~~ 177 (508)
T COG1404 129 VGALVANGAGLTGKGVTVAVIDTGVDASHPDLAGSAVA---------------------------GGDFVDGDP----EP 177 (508)
T ss_pred cccccccccCCCCCCeEEEEeccCCCCCChhhhccccc---------------------------ccccccCCC----CC
Confidence 3456664 4 99999999999999999999753110 012222110 01
Q ss_pred CCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCC-C-CCHHHHHHHHHHHHhCC--CcEEEe
Q 036830 216 SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEG-G-CSGAAILQAIDDAIHDG--VDIISI 291 (760)
Q Consensus 216 ~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~-g-~~~~~i~~ai~~a~~~g--~dVIN~ 291 (760)
...|..+|||||+|++++.... ......|+||+++++.++++... + ....+++++++++++.+ +++|||
T Consensus 178 ~~~d~~~hGt~vag~ia~~~~~-------~~~~~~g~a~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~in~ 250 (508)
T COG1404 178 PFLDDNGHGTHVAGTIAAVIFD-------NGAGVAGVAPGAKLLLVKVLGSGGGSGELSDVAEGIEGAANLGGPADVINL 250 (508)
T ss_pred CCCCCCCCcceeeeeeeeeccc-------CCCccccccCCCcEEEEEeccCCCCcccHHHHHHHHHHHHhcCCCCcEEEe
Confidence 2468899999999999984311 12234799999999999999865 5 77788899999999999 999999
Q ss_pred cccCCCCCCCCCCcHHHHHHHHHHhCC-cEEEEecCCCCCCCC----CccCCC--CceEEeccccccccceeeEEeCCCe
Q 036830 292 SIGLSNSEADYMNDPIAIGALHAQQRG-VVVICSAGNDGPYPF----TVANTA--PWLFTVAASTIDRDFQSTVLLGNGK 364 (760)
Q Consensus 292 SlG~~~~~~~~~~~~~~~a~~~a~~~G-i~vV~AAGN~G~~~~----~~~~~~--p~vitVgA~~~~~~~~~~~~~~~~~ 364 (760)
|+|.. ........+..++..+...| +++|+|+||.|.... ..+... +.+++|++.+.
T Consensus 251 s~g~~--~~~~~~~~~~~a~~~~~~~g~v~~v~aagn~~~~~~~~~~~~p~~~~~~~~i~v~a~~~-------------- 314 (508)
T COG1404 251 SLGGS--LSDSASPALGDALAAAANAGGVVIVAAAGNDGSNASGGDLAYPASYPAPNVIAVGALDL-------------- 314 (508)
T ss_pred cCCCC--ccccccHHHHHHHHHHHHcCCEEEEEecccCCCCCccccccCCcccCCCceEEEecCCC--------------
Confidence 99985 12234456666777887777 999999999996652 122222 35666665332
Q ss_pred eEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCc
Q 036830 365 AIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERG 444 (760)
Q Consensus 365 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~ 444 (760)
T Consensus 315 -------------------------------------------------------------------------------- 314 (508)
T COG1404 315 -------------------------------------------------------------------------------- 314 (508)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEe-----ee
Q 036830 445 ILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLA-----AI 519 (760)
Q Consensus 445 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~S-----a~ 519 (760)
.+.++.||++|+.. ..+++|||.+|.+ .+
T Consensus 315 ----------------------------------------~~~~~~~s~~g~~~------~~~~~apg~~i~~~~~~~~~ 348 (508)
T COG1404 315 ----------------------------------------SDTVASFSNDGSPT------GVDIAAPGVNILSLSAVNTL 348 (508)
T ss_pred ----------------------------------------CCccccccccCCCC------CcceeCCCccccccccceee
Confidence 15567899999741 2299999999998 44
Q ss_pred cCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCC-CCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCC
Q 036830 520 VPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRR-KWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANP 598 (760)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~ 598 (760)
+... ..|..++||||++|||+|++||+++.+| .+++.+++..+..++... ......
T Consensus 349 ~~~~------------~~~~~~~Gts~a~p~v~g~aal~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 405 (508)
T COG1404 349 PGDG------------ADYVTLSGTSMAAPHVSGVAALVLSANPNELTPAQVRNLIVTTAGLT-----------PLSGVD 405 (508)
T ss_pred eCCc------------cceEeeccccccccHHHHHHHHHHccCcccCCHHHHHHHHhhccccc-----------cCCccc
Confidence 4310 2499999999999999999999999999 899999999988888730 112344
Q ss_pred CCCCCcccCccccCC
Q 036830 599 HEMGAGEINPLKALN 613 (760)
Q Consensus 599 ~~~G~G~vn~~~Al~ 613 (760)
..++.|..+...+..
T Consensus 406 ~~~~~~~~~~~~~~~ 420 (508)
T COG1404 406 NLVGGGLANLDAAAT 420 (508)
T ss_pred cccccCccccccccc
Confidence 556777666655544
|
|
| >KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=207.69 Aligned_cols=421 Identities=15% Similarity=0.201 Sum_probs=239.2
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccce
Q 036830 8 LQLLPFLCLHWLIFVASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAF 87 (760)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ 87 (760)
..+.+|++|+|....+......-.+.|+|+|+..... ++..++...| - +......+...-.|.|. -
T Consensus 8 ~l~a~fl~lf~~~~gag~~~~vftnhflv~l~~g~g~-------~~ah~va~~h-g----f~nrg~~~a~d~eyhf~--h 73 (629)
T KOG3526|consen 8 DLIAVFLSLFCVMIGAGEAVDVFTNHFLVHLKEGGGL-------EDAHRVAKRH-G----FINRGQVAASDNEYHFV--H 73 (629)
T ss_pred HHHHHHHHHHHHHhccccCcceeeeeEEEEEeccCCh-------HHHHHHHHHh-C----ccccccccccCceeeee--c
Confidence 3455667777666666666666778999999998643 0111111111 1 11111111222234443 2
Q ss_pred eeEEE---EeCHHHHHHhcCCCCeEEEEeCcccccc------------------cCCCcccccccc---CCCcccccccc
Q 036830 88 KGFSA---ILTDSEASALSGHDHVVSVFPDPVLQLH------------------TTRSWDFLAAAA---KPAKNTWFNHK 143 (760)
Q Consensus 88 ~g~s~---~l~~~~i~~L~~~p~V~~V~~~~~~~~~------------------~~~s~~~~g~~~---~~~~~~~~~~~ 143 (760)
+++.- +-+...-++|.++|.|+-+....-+... -..+|-+....+ ......++.++
T Consensus 74 ~~l~har~rrsl~h~~~l~~dp~v~~a~qq~gf~r~krgyrp~~~fd~~~~dplf~~qwylkntgqaggk~rldlnv~~a 153 (629)
T KOG3526|consen 74 PALVHARTRRSLGHHAKLHNDPEVKMALQQEGFDRKKRGYRPINEFDINMNDPLFTKQWYLKNTGQAGGKPRLDLNVAEA 153 (629)
T ss_pred cccchhhhhcccchhhhhccChhHhhhhhccccchhhccCCchhhhccccCCcccceeeeeecccccCCcccccccHHHH
Confidence 33222 1222345678888888776644333221 112332221111 11113557789
Q ss_pred cccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCC--C
Q 036830 144 YHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSR--D 219 (760)
Q Consensus 144 ~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~--d 219 (760)
|.++ |++|+++|.|.||||-|||++. +|+ .-..++|..+. +++.|+ |
T Consensus 154 wa~g~tgknvttaimddgvdymhpdlk~------------------nyn-------aeasydfssnd----pfpyprytd 204 (629)
T KOG3526|consen 154 WALGYTGKNVTTAIMDDGVDYMHPDLKS------------------NYN-------AEASYDFSSND----PFPYPRYTD 204 (629)
T ss_pred HhhcccCCCceEEeecCCchhcCcchhc------------------ccC-------ceeecccccCC----CCCCCcccc
Confidence 9999 9999999999999999999973 111 11223333221 222222 2
Q ss_pred --CCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh-CCCcEEEecccCC
Q 036830 220 --PLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH-DGVDIISISIGLS 296 (760)
Q Consensus 220 --~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~SlG~~ 296 (760)
.+.|||.|||-+++...++ .+|+ |||.+.++..+|+++. ....|+++|-..-.+ ...+|.+-|||..
T Consensus 205 dwfnshgtrcagev~aardng--icgv------gvaydskvagirmldq--pymtdlieansmghep~kihiysaswgpt 274 (629)
T KOG3526|consen 205 DWFNSHGTRCAGEVVAARDNG--ICGV------GVAYDSKVAGIRMLDQ--PYMTDLIEANSMGHEPSKIHIYSASWGPT 274 (629)
T ss_pred hhhhccCccccceeeeeccCC--ceee------eeeeccccceeeecCC--chhhhhhhhcccCCCCceEEEEecccCcC
Confidence 5789999999888776553 4665 9999999999999965 456666666433332 3468999999988
Q ss_pred CCCCCCCCcHHH---HHHHHHH-----hCCcEEEEecCCCCCCC-CCcc--CCCCceEEeccccccccceeeEEeCCCee
Q 036830 297 NSEADYMNDPIA---IGALHAQ-----QRGVVVICSAGNDGPYP-FTVA--NTAPWLFTVAASTIDRDFQSTVLLGNGKA 365 (760)
Q Consensus 297 ~~~~~~~~~~~~---~a~~~a~-----~~Gi~vV~AAGN~G~~~-~~~~--~~~p~vitVgA~~~~~~~~~~~~~~~~~~ 365 (760)
. .....+.+-. .|+-+-+ ..|-+.|.|+|..|.+. +... +.+-|.|++.+.-.+ |+
T Consensus 275 d-dgktvdgprnatmraiv~gvnegrnglgsiyvwasgdgge~ddcncdgyaasmwtisinsaind-----------g~- 341 (629)
T KOG3526|consen 275 D-DGKTVDGPRNATMRAIVRGVNEGRNGLGSIYVWASGDGGEDDDCNCDGYAASMWTISINSAIND-----------GE- 341 (629)
T ss_pred C-CCcccCCchhHHHHHHHHhhhcccCCcccEEEEecCCCCCccccCCccchhheEEEEeehhhcC-----------Cc-
Confidence 5 2222332221 1222222 35679999999888432 2222 233466666432111 00
Q ss_pred EeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcc
Q 036830 366 IKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGI 445 (760)
Q Consensus 366 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 445 (760)
....++.|..
T Consensus 342 ------------------------------nahydescss---------------------------------------- 351 (629)
T KOG3526|consen 342 ------------------------------NAHYDESCSS---------------------------------------- 351 (629)
T ss_pred ------------------------------cccccchhhH----------------------------------------
Confidence 0000111211
Q ss_pred cceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCC
Q 036830 446 LPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDR 525 (760)
Q Consensus 446 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~ 525 (760)
-..+.||+-|..+ +- |+ -.+
T Consensus 352 ----------------------------------------tlastfsng~rnp--------et---gv--att------- 371 (629)
T KOG3526|consen 352 ----------------------------------------TLASTFSNGGRNP--------ET---GV--ATT------- 371 (629)
T ss_pred ----------------------------------------HHHHHhhcCCcCC--------Cc---ce--eee-------
Confidence 1234577766543 11 11 111
Q ss_pred CCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCC----cCCCCCCCCCCCCC
Q 036830 526 PGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTP----LTNSSGNNANPHEM 601 (760)
Q Consensus 526 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p----~~~~~~~~~~~~~~ 601 (760)
+-+......-||||.|+|-.||+.||.++++|.|+..+++.+-.-|..+..-.... +.-+.-..-.+.-|
T Consensus 372 ------dlyg~ct~~hsgtsaaapeaagvfalaleanp~ltwrd~qhltvltskrnslfd~~~rf~w~mngvglefnhlf 445 (629)
T KOG3526|consen 372 ------DLYGRCTRSHSGTSAAAPEAAGVFALALEANPSLTWRDLQHLTVLTSKRNSLFDGRCRFEWQMNGVGLEFNHLF 445 (629)
T ss_pred ------ccccceecccCCccccCccccceeeeeeccCCCcchhhhhheeeeecccchhhcccceEEEeccccceeeeccc
Confidence 11114455779999999999999999999999999999999877777654211100 00111233456679
Q ss_pred CCcccCccccCCCceeeecChhhHHhhhhhcC
Q 036830 602 GAGEINPLKALNPGLVFKTTIKDYLRFLCYYG 633 (760)
Q Consensus 602 G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~g 633 (760)
|+|.+|+.+-+..+.-+...+.. |-|..|
T Consensus 446 gfgvldagamv~lak~wktvppr---yhc~ag 474 (629)
T KOG3526|consen 446 GFGVLDAGAMVMLAKAWKTVPPR---YHCTAG 474 (629)
T ss_pred ccccccHHHHHHHHHHhccCCCc---eeeccc
Confidence 99999998887766666665554 347766
|
|
| >cd04056 Peptidases_S53 Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-17 Score=177.84 Aligned_cols=103 Identities=21% Similarity=0.227 Sum_probs=81.0
Q ss_pred CcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhC---CCcEEEecccCCCCC-CCCCCcHHHHHHHHHHhCCcEEE
Q 036830 247 GTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHD---GVDIISISIGLSNSE-ADYMNDPIAIGALHAQQRGVVVI 322 (760)
Q Consensus 247 g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~---g~dVIN~SlG~~~~~-~~~~~~~~~~a~~~a~~~Gi~vV 322 (760)
..+.||||+|+|+.|+++++. ...++.++.+++.+ +++|||+|||..... .....+.+..++.+|..+||+||
T Consensus 81 ~~~~gvAP~a~i~~~~~~~~~---~~~~~~a~~~ai~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gitvv 157 (361)
T cd04056 81 EYAGAIAPGANITLYFAPGTV---TNGPLLAFLAAVLDNPNLPSVISISYGEPEQSLPPAYAQRVCNLFAQAAAQGITVL 157 (361)
T ss_pred HHHHhccCCCeEEEEEECCcC---ccHHHHHHHHHHHcCCCCCCEEEccCCccccccCHHHHHHHHHHHHHHHhCCeEEE
Confidence 345799999999999998642 45677888888877 999999999998410 01123567778889999999999
Q ss_pred EecCCCCCCCC-----------CccCCCCceEEeccccccc
Q 036830 323 CSAGNDGPYPF-----------TVANTAPWLFTVAASTIDR 352 (760)
Q Consensus 323 ~AAGN~G~~~~-----------~~~~~~p~vitVgA~~~~~ 352 (760)
+|+||+|.... ..++..|+|++||+++...
T Consensus 158 aAsGd~G~~~~~~~~~~~~~~~~~Pas~P~V~sVGgt~~~~ 198 (361)
T cd04056 158 AASGDSGAGGCGGDGSGTGFSVSFPASSPYVTAVGGTTLYT 198 (361)
T ss_pred EeCCCCCCCCCCCCCCCCcccCCCCCCCCceeeeecccccC
Confidence 99999997653 3467889999999987654
|
Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin- |
| >PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.4e-09 Score=90.13 Aligned_cols=78 Identities=33% Similarity=0.452 Sum_probs=57.1
Q ss_pred cEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCc----cccccceEEEeccceeeEEEEeCHHHHHHhcCCCCe
Q 036830 33 PYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSE----ESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHV 108 (760)
Q Consensus 33 ~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V 108 (760)
+|||.|++.... ....+.|.+++.+++.+. .....++.+.|+..||||+++++++++++|+++|+|
T Consensus 1 ~YIV~~k~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gfs~~l~~~~i~~L~~~p~V 70 (82)
T PF05922_consen 1 RYIVVFKDDASA----------ASSFSSHKSWQASILKSALKSASSINAKVLYSYDNAFNGFSAKLSEEEIEKLRKDPGV 70 (82)
T ss_dssp EEEEEE-TTSTH----------HCHHHHHHHHHH----HHHHTH-TTT-EEEEEESSTSSEEEEEE-HHHHHHHHTSTTE
T ss_pred CEEEEECCCCCc----------chhHHHHHHHHHHHHhhhhhhhcccCCceEEEEeeeEEEEEEEeCHHHHHHHHcCCCe
Confidence 699999998654 113566666666544321 235678999999999999999999999999999999
Q ss_pred EEEEeCcccccc
Q 036830 109 VSVFPDPVLQLH 120 (760)
Q Consensus 109 ~~V~~~~~~~~~ 120 (760)
++|+||+.++++
T Consensus 71 ~~Ve~D~~v~l~ 82 (82)
T PF05922_consen 71 KSVEPDQVVSLH 82 (82)
T ss_dssp EEEEEECEEEE-
T ss_pred EEEEeCceEecC
Confidence 999999998764
|
In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Limited proteolysis of most large protein precursors is carried out in vivo by the subtilisin-like pro-protein convertases. Many important biological processes such as peptide hormone synthesis, viral protein processing and receptor maturation involve proteolytic processing by these enzymes []. The subtilisin-serine protease (SRSP) family hormone and pro-protein convertases (furin, PC1/3, PC2, PC4, PACE4, PC5/6, and PC7/7/LPC) act within the secretory pathway to cleave polypeptide precursors at specific basic sites, generating their biologically active forms. Serum proteins, pro-hormones, receptors, zymogens, viral surface glycoproteins, bacterial toxins, amongst others, are activated by this route []. The SRSPs share the same domain structure, including a signal peptide, the pro-peptide, the catalytic domain, the P/middle or homo B domain, and the C terminus. Proteinase propeptide inhibitors (sometimes refered to as activation peptides) are responsible for the modulation of folding and activity of the pro-enzyme or zymogen. The pro-segment docks into the enzyme moiety shielding the substrate binding site, thereby promoting inhibition of the enzyme. Several such propeptides share a similar topology [], despite often low sequence identities []. The propeptide region has an open-sandwich antiparallel-alpha/antiparallel-beta fold, with two alpha-helices and four beta-strands with a (beta/alpha/beta)x2 topology. This group of sequences contain the propeptide domain at the N terminus of peptidases belonging to MEROPS family S8A, subtilisins. A number of the members of this group of sequences belong to MEROPS inhibitor family I9, clan I-. The propeptide is removed by proteolytic cleavage; removal activating the enzyme.; GO: 0004252 serine-type endopeptidase activity, 0042802 identical protein binding, 0043086 negative regulation of catalytic activity; PDB: 3CNQ_P 1SPB_P 3CO0_P 1ITP_A 1V5I_B 1SCJ_B 3P5B_P 2XTJ_P 2W2M_P 2P4E_P .... |
| >PF06280 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR010435 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.6e-07 Score=81.98 Aligned_cols=87 Identities=16% Similarity=0.194 Sum_probs=62.0
Q ss_pred EEEeecccCceeEEEEEEEEecCCCCeEEEEEEeCC--------CCc-----------EEEEecceeEEeeCceEEEEEE
Q 036830 666 ISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAP--------SGL-----------AVKVFPQKLTFVEGIIKLSFKA 726 (760)
Q Consensus 666 ~~~~~~~~~~~~~t~~rtv~N~~~~~~~y~~~~~~~--------~g~-----------~v~v~p~~~~~~~~~~~~~~~v 726 (760)
|++++... ..++++||+|.|+.+.+|+++.... .|. .++..|.++++ ++|++++|+|
T Consensus 1 i~L~d~~~---~~~~~itl~N~~~~~~ty~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~vTV-~ag~s~~v~v 76 (112)
T PF06280_consen 1 ISLKDTGN---KFSFTITLHNYGDKPVTYTLSHVPVLTDKTDTEEGYSILVPPVPSISTVSFSPDTVTV-PAGQSKTVTV 76 (112)
T ss_dssp EEEEEE-S---EEEEEEEEEE-SSS-EEEEEEEE-EEEEEE--ETTEEEEEEEE----EEE---EEEEE--TTEEEEEEE
T ss_pred CCccccCC---ceEEEEEEEECCCCCEEEEEeeEEEEeeEeeccCCcccccccccceeeEEeCCCeEEE-CCCCEEEEEE
Confidence 45667755 7899999999999999999987621 111 56777888888 7899999999
Q ss_pred EEEEec----CCCCceEEEEEEECC-c-eEEEEEEE
Q 036830 727 SFFGKE----ASSGYNYGSITWSDD-R-HSVRMMFA 756 (760)
Q Consensus 727 t~~~~~----~~~~~~~G~~~~~~~-~-~~v~~P~~ 756 (760)
+++... ..+.+++|+|.+++. . +.++|||+
T Consensus 77 ti~~p~~~~~~~~~~~eG~I~~~~~~~~~~lsIPy~ 112 (112)
T PF06280_consen 77 TITPPSGLDASNGPFYEGFITFKSSDGEPDLSIPYM 112 (112)
T ss_dssp EEE--GGGHHTT-EEEEEEEEEESSTTSEEEEEEEE
T ss_pred EEEehhcCCcccCCEEEEEEEEEcCCCCEEEEeeeC
Confidence 999833 568999999999975 4 48999996
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain of unknown function is present in bacterial and plant peptidases belonging to MEROPS peptidase family S8 (subfamily S8A subtilisin, clan SB). It is C-terminal to and adjacent to the S8 peptidase domain and can be found in conjunction with the PA (Protease associated) domain (IPR003137 from INTERPRO) and additionally in Gram-positive bacteria with the surface protein anchor domain (IPR001899 from INTERPRO).; GO: 0004252 serine-type endopeptidase activity, 0005618 cell wall, 0016020 membrane; PDB: 3EIF_A 1XF1_B. |
| >KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-06 Score=97.16 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=60.0
Q ss_pred eeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCC
Q 036830 540 LRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNP 614 (760)
Q Consensus 540 ~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~ 614 (760)
--.|||.++|+.||+.+|.++++|.++..++..+...++.........++.+.........+|+|++|...-+..
T Consensus 251 ~h~g~s~~~~~~a~~~~~~~~~~~~ls~~d~~~l~~~~~~~~~~~~~~~~~n~~g~~~~h~~g~~~~~~~~~~~~ 325 (431)
T KOG3525|consen 251 GHTGTSASAPLAAGIIALALEANPCLSWRDSQHLIVLTSRPKVLLKGKWKSNGAGGLVSHLYGFGLLDAKALVSC 325 (431)
T ss_pred cCCCCcCccchhcchhhhhhccCccccccchhhhhhhhcchhhccCCCceEecCCceeeeeecccccCcchhhhh
Confidence 346999999999999999999999999999999999999876443335554444445566799999999877664
|
|
| >cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-06 Score=82.65 Aligned_cols=102 Identities=27% Similarity=0.318 Sum_probs=73.4
Q ss_pred CceeeeEecccccccccccccccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCCCC---CC
Q 036830 379 SKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIWP---TE 442 (760)
Q Consensus 379 ~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~~---~~ 442 (760)
....+++|.+. |....+...+++|| |..+++++||.++|++|+...... ..
T Consensus 25 ~~~~~lv~~g~-------------g~~~d~~~~dv~GkIvL~~rg~c~~~~K~~~a~~aGA~gvIi~n~~~~~~~~~~~~ 91 (143)
T cd02133 25 GKTYELVDAGL-------------GTPEDFEGKDVKGKIALIQRGEITFVEKIANAKAAGAVGVIIYNNVDGLIPGTLGE 91 (143)
T ss_pred CcEEEEEEccC-------------CchhccCCCCccceEEEEECCCCCHHHHHHHHHHCCCeEEEEeecCCCcccccCCC
Confidence 45677777543 33444445566666 889999999999999998765431 11
Q ss_pred CcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCC
Q 036830 443 RGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGL 498 (760)
Q Consensus 443 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 498 (760)
...+|++.|+.++|+.|++|+++ .+++.+..+.. ..+.+.++.||||||+.
T Consensus 92 ~~~iP~v~Is~~dG~~L~~~l~~----~~~i~~~~~~~-~~~~p~va~fSsrgp~g 142 (143)
T cd02133 92 AVFIPVVFISKEDGEALKAALES----SKKLTFNTKKE-KATNPDLADFSSRGPWG 142 (143)
T ss_pred CCeEeEEEecHHHHHHHHHHHhC----CCeEEEEeccc-cccCCccccccCcCCCC
Confidence 24689999999999999999988 34444444333 45678899999999963
|
This group contains various PA domain-containing proteins similar to S. pyogenes C5a, including, i) Vpr, a minor extracellular serine protease from Bacillus subtilis, ii) a large molecular mass collagenolytic protease from Geobacillus collagenovorans MO-1, and iii) PrtS, a cell envelope protease from Streptococcus thermophilus CNRZ 385. Proteins in this group belong to the peptidase S8 family. C5a peptidase is a cell surface serine protease which specifically inactivates C5a [a chemotactic peptide, which attracts polymorphonuclear leukocytes (PMNs)], by cleaving it to release a 7-residue carboxy-terminal fragment which contains the PMN binding site. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promotin |
| >COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.37 E-value=3e-06 Score=100.91 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=59.6
Q ss_pred CcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCC-cEEEecccCCCC-CCCC--CCcHHHHHHHHHHhCCcEEE
Q 036830 247 GTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGV-DIISISIGLSNS-EADY--MNDPIAIGALHAQQRGVVVI 322 (760)
Q Consensus 247 g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~-dVIN~SlG~~~~-~~~~--~~~~~~~a~~~a~~~Gi~vV 322 (760)
+-..-+||+|+|..|-+-. .....+..|+.+....=+ -++-.||+.... ...+ .-+.+..-...|.++|+.++
T Consensus 286 E~s~A~AP~A~I~lvvap~---~~~~a~dna~n~~~~~~~s~~ip~S~s~~~~~~~~~~~~~~~~d~l~~qasaeGITi~ 362 (1174)
T COG4934 286 EWSHAMAPKANIDLVVAPN---PLVSALDNAYNEVLYYMVSFVIPISWSYAEFQGPISPGYADLMDLLYEQASAEGITIF 362 (1174)
T ss_pred hhhhccCccCceEEEEcCC---CceehhhHHHHHHHHhhhcccccchhHHHHhccCCChHHHHHHHHHHHHhhccceEEE
Confidence 3446789999999987722 222222333333322211 334456665421 1111 22444555578889999999
Q ss_pred EecCCCCCCCCC--------ccCCCCceEEecc
Q 036830 323 CSAGNDGPYPFT--------VANTAPWLFTVAA 347 (760)
Q Consensus 323 ~AAGN~G~~~~~--------~~~~~p~vitVgA 347 (760)
+|+|.+|....+ .++.+|++++||.
T Consensus 363 AASGD~Gay~~~~~~~~sv~~PasSPYVtsVGG 395 (1174)
T COG4934 363 AASGDSGAYDDTPTPYLSVNFPASSPYVTSVGG 395 (1174)
T ss_pred EecccccccCCCcccceeecccCCCccEEeecC
Confidence 999999866543 3467899999997
|
|
| >cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.8e-06 Score=75.56 Aligned_cols=108 Identities=40% Similarity=0.563 Sum_probs=82.1
Q ss_pred EEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccch--------------hhhhhhh
Q 036830 358 VLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR--------------KIAVAEN 423 (760)
Q Consensus 358 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gk--------------k~~~~~~ 423 (760)
+.++|++++.|++++.... ..+++++.... ........|.+..++..+++|| |..++++
T Consensus 2 i~LGng~~i~G~sl~~~~~---~~~~~~~~~~~----~~~~~~~~C~~~~~~~~~v~GkIVlc~~~~~~~~~~k~~~~~~ 74 (126)
T cd02120 2 VTLGNGKTIVGQSLYPGNL---KTYPLVYKSAN----SGDVDASLCLPGSLDPSKVKGKIVLCDRGGNTSRVAKGDAVKA 74 (126)
T ss_pred EEeCCCCEEEEEEccCCCC---CccceEeccCc----CCCCccccCCCCCCChhhccccEEEEeCCCCccHHHHHHHHHH
Confidence 6789999999999996443 45677763321 2334457898888888888888 5677899
Q ss_pred cCceEEEEEcCCCCCC--CCCCcccceEEechhhHHHHHHHHhcCCCCeEE
Q 036830 424 VEAQGLIFINDDEKIW--PTERGILPYAEVGKVAGFRIINYINSNKNPTAT 472 (760)
Q Consensus 424 ~Ga~~~i~~~~~~~~~--~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~ 472 (760)
+||.|+|++++..... ......+|++.|..++++.|+.|++++..++++
T Consensus 75 ~GA~gvI~~~~~~~~~~~~~~~~~iP~v~I~~~~g~~l~~y~~~~~~~~~~ 125 (126)
T cd02120 75 AGGAGMILANDPTDGLDVVADAHVLPAVHVDYEDGTAILSYINSTSNPTAT 125 (126)
T ss_pred cCCcEEEEEecCCCCceecccccccceEEECHHHHHHHHHHHHcCCCccee
Confidence 9999999998876543 222367999999999999999999987665543
|
This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, members of the tomato P69 family, and tomato LeSBT2. These proteins belong to the peptidase S8 family. Cucumisin from the juice of melon fruits is a thermostable serine peptidase, with a broad substrate specificity for oligopeptides and proteins. A. thaliana Ara12 is a thermostable, extracellular serine protease, found chiefly in silique tissue and stem tissue. Ara12 is stimulated by Ca2+ ions. A. glutinosa ag12 is expressed at high levels in the nodules, and at low levels in the shoot tips; it is implicated in both symbiotic and non-symbiotic processes in plant development. The tomato P69 protease family is comprised of various protein isoforms of approximately 69KDa. These isoforms accu |
| >cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00068 Score=62.25 Aligned_cols=72 Identities=18% Similarity=0.203 Sum_probs=57.8
Q ss_pred ccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCCC------CC-CCcccceEEechhhHHHH
Q 036830 400 ASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIW------PT-ERGILPYAEVGKVAGFRI 459 (760)
Q Consensus 400 ~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~------~~-~~~~~p~~~i~~~~g~~l 459 (760)
.+.|.+..+...+++|| |..+++++||.++|++|+..... .. ....+|++.|+..+|+.|
T Consensus 29 ~~gC~~~~~~~~~~~GkIvLv~rg~c~f~~K~~~A~~aGA~avIi~n~~~~~~~~~~~~~~~~~~~iP~~~Is~~~G~~l 108 (122)
T cd04816 29 PAGCDASDYDGLDVKGAIVLVDRGGCPFADKQKVAAARGAVAVIVVNNSDGGGTAGTLGAPNIDLKVPVGVITKAAGAAL 108 (122)
T ss_pred ccCCCccccCCCCcCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEeCCCCccccccccCCCCCCeeeEEEEcHHHHHHH
Confidence 36798887777788888 88999999999999998876321 11 235699999999999999
Q ss_pred HHHHhcCCCCeE
Q 036830 460 INYINSNKNPTA 471 (760)
Q Consensus 460 ~~~~~~~~~~~~ 471 (760)
++++..+.+.++
T Consensus 109 ~~~l~~g~~v~~ 120 (122)
T cd04816 109 RRRLGAGETLEL 120 (122)
T ss_pred HHHHcCCCEEEE
Confidence 999988765444
|
This group contains various PA domain-containing proteins similar SaNapH. Proteins in this group belong to the peptidase M28 family. NapH is a terminal enzyme in the puromycin biosynthetic pathway; NapH hydrolyzes N-acetylpuromycin to the active antibiotic. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. |
| >cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0024 Score=59.72 Aligned_cols=75 Identities=16% Similarity=0.172 Sum_probs=56.9
Q ss_pred ccccccccCCC--CCccccch-------------hhhhhhhcCceEEEEEcCCC-CC-C----CCCCcccceEEechhhH
Q 036830 398 SQASQCLYTTL--YPMDTRGR-------------KIAVAENVEAQGLIFINDDE-KI-W----PTERGILPYAEVGKVAG 456 (760)
Q Consensus 398 ~~~~~c~~~~~--~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~-~~-~----~~~~~~~p~~~i~~~~g 456 (760)
...+.|.+... ...++.|+ |..+++++||.++|+||+.. .. . ......+|+++|+..+|
T Consensus 42 ~~~~gC~~~~~~~~~~~~~g~IaLV~RG~C~F~~K~~nA~~aGA~aVIIyn~~~~~~~~~~m~~~~~~~ip~v~Is~~~G 121 (138)
T cd02122 42 NDHYGCDPDTRFPIPPNGEPWIALIQRGNCTFEEKIKLAAERNASAVVIYNNPGTGNETVKMSHPGTGDIVAIMITNPKG 121 (138)
T ss_pred CCcCCCCCCccccCCccCCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCCCCceeeccCCCCCcceEEEEcHHHH
Confidence 34567988766 44455444 89999999999999999886 22 1 12225789999999999
Q ss_pred HHHHHHHhcCCCCeEE
Q 036830 457 FRIINYINSNKNPTAT 472 (760)
Q Consensus 457 ~~l~~~~~~~~~~~~~ 472 (760)
+.|+.++.++.+.+++
T Consensus 122 ~~l~~~l~~G~~Vtv~ 137 (138)
T cd02122 122 MEILELLERGISVTMV 137 (138)
T ss_pred HHHHHHHHcCCcEEEe
Confidence 9999999988776654
|
This group includes PA domain containing E3 (ubiquitin ligases) similar to human GRAIL (gene related to anergy in lymphocytes) protein. Proteins in this group contain a C3H2C3 RING finger. E3 ubiquitin ligase is part of an enzymic cascade, the end result of which is the ubiquitination of proteins. In this cascade, E1 activates the ubiquitin, the activated ubiquitin is carried by E2, and E3 recognizes the acceptor protein as well as catalyzes the transfer of the activated ubiquitin from E2 to this acceptor. GRAIL, a transmembrane protein localized in the endosomes, controls the development of T cell clonal anergy, and may ubiquitinate membrane-associated targets for T cell activation. GRAIL1 is associated with, and regulated by, two isoforms of otubain 1 (the ubiquitin-specific protease). Additional E3s belonging to this group include human (h)Goliath and Xenopus GREUL1 (Goliath Related E3 Ubiquitin Ligase |
| >PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0011 Score=58.39 Aligned_cols=65 Identities=20% Similarity=0.307 Sum_probs=49.3
Q ss_pred cccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCC------CCCCCcccceEEechhhHHHH
Q 036830 399 QASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKI------WPTERGILPYAEVGKVAGFRI 459 (760)
Q Consensus 399 ~~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~------~~~~~~~~p~~~i~~~~g~~l 459 (760)
....|.+......+++|| |..+++++||.++|++|..... .......+|+++|+..+|+.|
T Consensus 18 ~~~~~~~~~~~~~~~~gkIvlv~rg~~~~~~k~~~a~~~GA~gvIi~~~~~~~~~~~~~~~~~~~~iP~v~I~~~~g~~L 97 (101)
T PF02225_consen 18 DEGDCCPSDYNGSDVKGKIVLVERGSCSFDDKVRNAQKAGAKGVIIYNPPPNNGSMIDSEDPDPIDIPVVFISYEDGEAL 97 (101)
T ss_dssp ECCHHHHHHTSTSTCTTSEEEEESTSSCHHHHHHHHHHTTESEEEEE-TSCSCTTTTCEBTTTSTBSEEEEE-HHHHHHH
T ss_pred CcccccccccCCccccceEEEEecCCCCHHHHHHHHHHcCCEEEEEEeCCccccCcccccCCCCcEEEEEEeCHHHHhhh
Confidence 345577777888888888 8999999999999999921111 123348899999999999999
Q ss_pred HHHH
Q 036830 460 INYI 463 (760)
Q Consensus 460 ~~~~ 463 (760)
++|+
T Consensus 98 ~~~i 101 (101)
T PF02225_consen 98 LAYI 101 (101)
T ss_dssp HHHH
T ss_pred hccC
Confidence 9985
|
The PA domain is also found in a plant vacuolar sorting receptor O22925 from SWISSPROT and members of the RZF family, e.g. O43567 from SWISSPROT.; PDB: 3EIF_A 1XF1_B 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A .... |
| >cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0037 Score=57.34 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=53.6
Q ss_pred cccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCC-CCC----CC-CCcccceEEechhhHHHHHH
Q 036830 401 SQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDE-KIW----PT-ERGILPYAEVGKVAGFRIIN 461 (760)
Q Consensus 401 ~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~-~~~----~~-~~~~~p~~~i~~~~g~~l~~ 461 (760)
..|.+..+ +.+++|| |..+++++||.++|++|+.. ... .. ....+|++.|+.++|+.|+.
T Consensus 32 ~gC~~~~~-~~~~~gkIvlv~rg~c~f~~K~~~A~~aGA~~vIv~n~~~~~~~~~~~~~~~~~~Ip~v~Is~~~G~~L~~ 110 (122)
T cd02130 32 LGCDAADY-PASVAGNIALIERGECPFGDKSALAGAAGAAAAIIYNNVPAGGLSGTLGEPSGPYVPTVGISQEDGKALVA 110 (122)
T ss_pred CCCCcccC-CcCCCCEEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCCcccccccCCCCCCEeeEEEecHHHHHHHHH
Confidence 35765444 2456776 89999999999999998873 221 11 23679999999999999999
Q ss_pred HHhcCCCCeEE
Q 036830 462 YINSNKNPTAT 472 (760)
Q Consensus 462 ~~~~~~~~~~~ 472 (760)
.++.+.+.+++
T Consensus 111 ~l~~g~~v~~~ 121 (122)
T cd02130 111 ALANGGEVSAN 121 (122)
T ss_pred HHhcCCcEEEe
Confidence 99988766553
|
This group contains various PA domain-containing proteins similar to the S. cerevisiae APY, including Trichophyton rubrum leucine aminopeptidase 1(LAP1). Proteins in this group belong to the peptidase M28 family. ScAPY hydrolyzes amino acid-4-methylcoumaryl-7-amides (MCAs). ScAPY more rapidly hydrolyzes dipeptidyl-MCAs. Hydrolysis of amino acid-MCAs or dipeptides is stimulated by Co2+ while the hydrolysis of dipeptidyl-MCAs, tripeptides, and longer peptides is inhibited by Co2+. ScAPY is vacuolar and is activated by proteolytic processing. LAP1 is a secreted leucine aminopeptidase. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stab |
| >cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0049 Score=55.90 Aligned_cols=67 Identities=18% Similarity=0.282 Sum_probs=53.8
Q ss_pred cccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCCC-----C-CCCcccceEEechhhHHHH
Q 036830 399 QASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIW-----P-TERGILPYAEVGKVAGFRI 459 (760)
Q Consensus 399 ~~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~-----~-~~~~~~p~~~i~~~~g~~l 459 (760)
....|.+..+...+++|| |..+++.+||.++|++|+..... . .....||+++|+..+|+.|
T Consensus 29 ~~~gC~~~~~~~~~l~gkIaLV~RG~CsF~~K~~~Aq~aGA~aVII~nn~~~~~~~~~~~~~~~v~IP~v~Is~~dG~~i 108 (120)
T cd02129 29 SSVLCSASDVPPGGLKGKAVVVMRGNCTFYEKARLAQSLGAEGLLIVSRERLVPPSGNRSEYEKIDIPVALLSYKDMLDI 108 (120)
T ss_pred CcCCCCccccCccccCCeEEEEECCCcCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCcCCcccEEEEeHHHHHHH
Confidence 346799888877777777 99999999999999999876421 1 1336789999999999999
Q ss_pred HHHHhc
Q 036830 460 INYINS 465 (760)
Q Consensus 460 ~~~~~~ 465 (760)
++.+.+
T Consensus 109 ~~~l~~ 114 (120)
T cd02129 109 QQTFGD 114 (120)
T ss_pred HHHhcc
Confidence 998774
|
This group contains various PA domain-containing proteins similar to hSPPL2a and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is sorted to the late endosomes, SPPL2b to the plasma membrane. In activated dendritic cells, hSPPL2a and 2b catalyze the intramembrane proteolysis of tumor necrosis factor alpha triggering IL-12 production. hSPPL2a and 2b may have a broad substrate spectrum. The significance of the PA domain to these SPPLs has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. |
| >cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0055 Score=55.72 Aligned_cols=73 Identities=21% Similarity=0.176 Sum_probs=55.9
Q ss_pred ccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCC-C------C---CCCcccceEEechhhH
Q 036830 400 ASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKI-W------P---TERGILPYAEVGKVAG 456 (760)
Q Consensus 400 ~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~-~------~---~~~~~~p~~~i~~~~g 456 (760)
.+.|.+... ..+++|+ |..+++++||.++|++|+.... . . .....||+++|+..+|
T Consensus 21 ~~gC~~~~~-~~~~~g~I~Lv~RG~C~F~~K~~~Aq~aGA~avII~n~~~~~~~~~~~m~~~~~~~~i~IP~v~Is~~dG 99 (118)
T cd02127 21 LEACEELRN-IHDINGNIALIERGGCSFLTKAINAQKAGALAVIITDVNNDSDEYYVEMIQDDSSRRADIPAAFLLGKNG 99 (118)
T ss_pred cccCCCCCC-ccccCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCCccccceEecCCCCCCCceEEEEEecHHHH
Confidence 456886433 4456666 8999999999999999876541 1 1 2236899999999999
Q ss_pred HHHHHHHhcCCCCeEEE
Q 036830 457 FRIINYINSNKNPTATI 473 (760)
Q Consensus 457 ~~l~~~~~~~~~~~~~i 473 (760)
+.|++.+..+..+++.|
T Consensus 100 ~~L~~~l~~g~~~~~~~ 116 (118)
T cd02127 100 YMIRKTLERLGLPYAII 116 (118)
T ss_pred HHHHHHHHcCCceEEee
Confidence 99999999887776554
|
This group contains various PA domain-containing proteins similar to hPAP21. Complex N-glycosylation may be required for the secretion of hPAP21. The significance of the PA domain to hPAP21 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. |
| >cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0044 Score=56.49 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=56.2
Q ss_pred cccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCCC--C----CCCcccceEEechhhHHHH
Q 036830 399 QASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIW--P----TERGILPYAEVGKVAGFRI 459 (760)
Q Consensus 399 ~~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~--~----~~~~~~p~~~i~~~~g~~l 459 (760)
....|.+.... .+++|| |..+++++||.++|++|+..... . .....+|++.|+.++|+.|
T Consensus 26 ~~~~C~~~~~~-~~v~GkIvL~~rg~c~f~~k~~~a~~aGA~gvIi~~~~~~~~~~~~~~~~~~~~iP~v~V~~~~g~~l 104 (118)
T cd04818 26 NTDGCTAFTNA-AAFAGKIALIDRGTCNFTVKVLNAQNAGAIAVIVANNVAGGAPITMGGDDPDITIPAVMISQADGDAL 104 (118)
T ss_pred cccccCCCCcC-CCCCCEEEEEECCCCCHHHHHHHHHHCCCeEEEEEECCCCCcceeccCCCCCCEEeEEEecHHHHHHH
Confidence 44578887763 347777 78899999999999998876532 1 2225799999999999999
Q ss_pred HHHHhcCCCCeEE
Q 036830 460 INYINSNKNPTAT 472 (760)
Q Consensus 460 ~~~~~~~~~~~~~ 472 (760)
+.|++.+...+++
T Consensus 105 ~~~l~~g~~v~v~ 117 (118)
T cd04818 105 KAALAAGGTVTVT 117 (118)
T ss_pred HHHHhcCCcEEEe
Confidence 9999987765543
|
A subgroup of PA domain-containing subtilisin-like proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following subtilisin-like proteases: i) melon cucumisin, ii) Arabidopsis thaliana Ara12, iii) Alnus glutinosa ag12, iv) members of the tomato P69 family, and v) tomato LeSBT2. However, these proteins belong to other subtilisin-like subgroups. Relatively little is known about proteins in this subgroup. |
| >cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.016 Score=53.61 Aligned_cols=72 Identities=18% Similarity=0.080 Sum_probs=53.0
Q ss_pred ccccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCCC----CCCCcccceEEechhhHHHHH
Q 036830 398 SQASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIW----PTERGILPYAEVGKVAGFRII 460 (760)
Q Consensus 398 ~~~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~----~~~~~~~p~~~i~~~~g~~l~ 460 (760)
...+.|.+...+..+++|| |..+++++||.++|+||+..... .+. ..++.+.+ ..+|+.|+
T Consensus 39 ~~~~gC~~~~~~~~~~~g~IaLv~rg~c~f~~K~~nA~~aGA~aviiyn~~~~~~~~~~~~~-~~~~~~~~-~~~G~~l~ 116 (129)
T cd02124 39 VADDACQPLPDDTPDLSGYIVLVRRGTCTFATKAANAAAKGAKYVLIYNNGSGPTDQVGSDA-DSIIAAVT-PEDGEAWI 116 (129)
T ss_pred CCcccCcCCCcccccccCeEEEEECCCCCHHHHHHHHHHcCCcEEEEEECCCCcccccCCCC-cceeeEEe-HHHHHHHH
Confidence 4456898766555567776 89999999999999998876433 122 34555555 99999999
Q ss_pred HHHhcCCCCeE
Q 036830 461 NYINSNKNPTA 471 (760)
Q Consensus 461 ~~~~~~~~~~~ 471 (760)
+.++.+...++
T Consensus 117 ~~l~~G~~vtv 127 (129)
T cd02124 117 DALAAGSNVTV 127 (129)
T ss_pred HHHhcCCeEEE
Confidence 99987765444
|
This group includes various PA domain-containing proteins similar to Pleurotus ostreatus (Po)S1. PoSl, the main extracellular protease in P. ostreatus is a subtilisin-like serine protease belonging to the peptidase S8 family. Ca2+ and Mn2+ both stimulate the protease activity of (Po)S1. Ca2+ protects PoS1 from autolysis. PoS1 is a monomeric glycoprotein, which may play a role in the regulation of laccases in lignin formation. (Po)S1 participates in the degradation of POXA1b, and in the activation of POXA3, (POXA1b and POXA3 are laccase isoenzymes), but its effect may be indirect. The significance of the PA domain to PoS1 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. |
| >cd00538 PA PA: Protease-associated (PA) domain | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.006 Score=56.02 Aligned_cols=73 Identities=19% Similarity=0.312 Sum_probs=56.0
Q ss_pred cccccccCC--CCCccccch-------------hhhhhhhcCceEEEEEcCCCCCC----C----CCCcccceEEechhh
Q 036830 399 QASQCLYTT--LYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIW----P----TERGILPYAEVGKVA 455 (760)
Q Consensus 399 ~~~~c~~~~--~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~----~----~~~~~~p~~~i~~~~ 455 (760)
....|.+.. +...+++|| |..+++++||.++|++++..... . .....+|++.|+..+
T Consensus 29 ~~~~C~~~~~~~~~~~~~GkIvl~~~g~~~~~~k~~~a~~~GA~gvii~~~~~~~~~~~~~~~~~~~~~~iP~~~is~~~ 108 (126)
T cd00538 29 PLVGCGYGTTDDSGADVKGKIVLVRRGGCSFSEKVKNAQKAGAKAVIIYNNGDDPGPQMGSVGLESTDPSIPTVGISYAD 108 (126)
T ss_pred ceEEEecCcccccCCCccceEEEEECCCcCHHHHHHHHHHCCCEEEEEEECCCCcccccccccCCCCCCcEeEEEeCHHH
Confidence 345687766 666777777 78999999999999998876421 1 123579999999999
Q ss_pred HHHHHHHHhcCCCCeE
Q 036830 456 GFRIINYINSNKNPTA 471 (760)
Q Consensus 456 g~~l~~~~~~~~~~~~ 471 (760)
|+.|+.|+.++.+.++
T Consensus 109 g~~l~~~~~~~~~v~~ 124 (126)
T cd00538 109 GEALLSLLEAGKTVTV 124 (126)
T ss_pred HHHHHHHHhcCCceEE
Confidence 9999999987655443
|
The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases including, hSPPL2a and 2b which catalyze the intramembrane proteolysis of tumor necrosis factor alpha, ii) various proteins containing a C3H2C3 RING finger including, Arabidopsis ReMembR-H2 protein and various E3 ubiquitin ligases such as human GRAIL (gene related to anergy in lymphocytes), iii) EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein), iv) various plant vacuolar sorting receptors such as Pisum sativum BP-80, v) g |
| >cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0068 Score=55.90 Aligned_cols=71 Identities=20% Similarity=0.255 Sum_probs=53.6
Q ss_pred ccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCC------C------C--CCCcccceEEec
Q 036830 400 ASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKI------W------P--TERGILPYAEVG 452 (760)
Q Consensus 400 ~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~------~------~--~~~~~~p~~~i~ 452 (760)
.+.|.+... ..+++|| |..+++++||.++|++|+.... . . .....||+++|+
T Consensus 27 ~~gC~~~~~-~~~~~gkIaLv~RG~C~f~~K~~~Aq~aGA~avII~n~~~~~~~~~~~~~~m~~~~~~~~~~~IP~v~I~ 105 (126)
T cd02126 27 YRACSEITN-AEEVKGKIAIMERGDCMFVEKARRVQKAGAIGGIVIDNNEGSSSDTAPMFAMSGDGDSTDDVTIPVVFLF 105 (126)
T ss_pred hhcccCCCC-ccccCceEEEEECCCCcHHHHHHHHHHCCCcEEEEEECCCCccccccceeEeecCCCCCCCCeEEEEEEE
Confidence 356876544 4456666 8999999999999999876542 1 1 123679999999
Q ss_pred hhhHHHHHHHHhcCCCCeE
Q 036830 453 KVAGFRIINYINSNKNPTA 471 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~ 471 (760)
..+|+.|++.++.+...++
T Consensus 106 ~~dG~~L~~~l~~~~~~~~ 124 (126)
T cd02126 106 SKEGSKLLAAIKEHQNVEV 124 (126)
T ss_pred HHHHHHHHHHHHhCCceEE
Confidence 9999999999988765543
|
This group contains various PA domain-containing proteins similar to mouse EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein). EDEM3 contains a region, similar to Class I alpha-mannosidases (gylcosyl hydrolase family 47), N-terminal to the PA domain. EDEM3 accelerates glycoprotein ERAD (ER-associated degradation). In transfected mammalian cells, overexpression of EDEM3 enhances the mannose trimming from the N-glycans, of a model misfolded protein [alpha1-antitrypsin null (Hong Kong)] as well as, from total glycoproteins. Mannose trimming appears to be involved in the selection of ERAD substrates. EDEM3 has a different specificity of trimming than ER alpha-mannosidase 1. The significance of the PA domain to EDEM3 has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or pr |
| >PF14874 PapD-like: Flagellar-associated PapD-like | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.051 Score=47.90 Aligned_cols=81 Identities=16% Similarity=0.092 Sum_probs=62.4
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEEecCCCCceEEEEEEECCceEEEEEEE
Q 036830 677 IRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFA 756 (760)
Q Consensus 677 ~~t~~rtv~N~~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~~~~~~v~~P~~ 756 (760)
..+.+++|+|.|..+..|++.........++++|..-.+ .+|++.++.|+|.+.. ..+.+.+.|...-.+..+.+|+-
T Consensus 21 ~~~~~v~l~N~s~~p~~f~v~~~~~~~~~~~v~~~~g~l-~PG~~~~~~V~~~~~~-~~g~~~~~l~i~~e~~~~~i~v~ 98 (102)
T PF14874_consen 21 TYSRTVTLTNTSSIPARFRVRQPESLSSFFSVEPPSGFL-APGESVELEVTFSPTK-PLGDYEGSLVITTEGGSFEIPVK 98 (102)
T ss_pred EEEEEEEEEECCCCCEEEEEEeCCcCCCCEEEECCCCEE-CCCCEEEEEEEEEeCC-CCceEEEEEEEEECCeEEEEEEE
Confidence 566788999999999999998655344567788877666 6789999999998533 34457898988776678899987
Q ss_pred EEE
Q 036830 757 VDV 759 (760)
Q Consensus 757 ~~~ 759 (760)
+.+
T Consensus 99 a~~ 101 (102)
T PF14874_consen 99 AEV 101 (102)
T ss_pred EEE
Confidence 764
|
|
| >cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.011 Score=55.47 Aligned_cols=69 Identities=23% Similarity=0.312 Sum_probs=53.0
Q ss_pred ccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCCC-----CC---CCcccceEEechhhHHH
Q 036830 400 ASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKIW-----PT---ERGILPYAEVGKVAGFR 458 (760)
Q Consensus 400 ~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~-----~~---~~~~~p~~~i~~~~g~~ 458 (760)
.+.|.+... +++|+ |..+++++||.++|+||+..... .. ....||+++|+..+|+.
T Consensus 48 ~~gC~~~~~---~~~g~IvLV~RG~C~F~~K~~nA~~aGA~avIv~n~~~~~~~~~~~~~~~~~~~~IP~v~Is~~~G~~ 124 (139)
T cd02132 48 LDCCSPSTS---KLSGSIALVERGECAFTEKAKIAEAGGASALLIINDQEELYKMVCEDNDTSLNISIPVVMIPQSAGDA 124 (139)
T ss_pred ccccCCCCc---ccCCeEEEEECCCCCHHHHHHHHHHcCCcEEEEEECCCcccccccCCCCCCCCCcEeEEEecHHHHHH
Confidence 467887653 45665 99999999999999998765321 11 13689999999999999
Q ss_pred HHHHHhcCCCCeE
Q 036830 459 IINYINSNKNPTA 471 (760)
Q Consensus 459 l~~~~~~~~~~~~ 471 (760)
|++.+..+...++
T Consensus 125 L~~~l~~g~~Vtv 137 (139)
T cd02132 125 LNKSLDQGKKVEV 137 (139)
T ss_pred HHHHHHcCCcEEE
Confidence 9999998766543
|
This group contains various PA domain-containing proteins similar to the functionally uncharacterized Arabidopsis GRO10. The PA domain may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. |
| >cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.018 Score=53.08 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=45.3
Q ss_pred hhhhhhhcCceEEEEEcCCCCCC-----C--------CCCcccceEEechhhHHHHHHHHhcCCCCeEE
Q 036830 417 KIAVAENVEAQGLIFINDDEKIW-----P--------TERGILPYAEVGKVAGFRIINYINSNKNPTAT 472 (760)
Q Consensus 417 k~~~~~~~Ga~~~i~~~~~~~~~-----~--------~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~ 472 (760)
|..+++++||.++|++|+..... + .....+|+++|+..+|+.|+..+.++...+++
T Consensus 58 K~~~Aq~aGA~avII~n~~~~~~~~m~~~~~~~~~~~~~~i~IP~v~Is~~~G~~L~~~l~~g~~V~v~ 126 (127)
T cd02125 58 KAWNAQQAGAAAVLVADNVDEPLLTMDTPEESGSADYIEKITIPSALITKAFGEKLKKAISNGEMVVIK 126 (127)
T ss_pred HHHHHHHCCCcEEEEEECCCCccccccCcccccccccCCCceEeEEEECHHHHHHHHHHHhcCCeEEEe
Confidence 99999999999999999865431 0 11246999999999999999999988766543
|
This group includes various PA domain-containing VSRs such as garden pea BP-80, pumpkin PV72, and various Arabidopsis VSRs including AtVSR1. In contrast to most eukaryotes, which only have one or two VSRs, plants have several. This may in part be a reflection of having a more complex vacuolar system with both lytic vacuoles and storage vacuoles. The lytic vacuole is thought to be equivalent to the mammalian lysosome and the yeast vacuole. Pea BP-80 is a type 1 transmembrane protein, involved in the targeting of proteins to the lytic vacuole; it has been suggested that this protein also mediates targeting to the storage vacuole. PV72 and AtVSR1 may mediate transport of seed storage proteins to protein storage vacuoles. The significance of the PA domain to VSRs has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may partic |
| >cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.046 Score=50.50 Aligned_cols=52 Identities=23% Similarity=0.314 Sum_probs=42.1
Q ss_pred hhhhhhhcCceEEEEEcCCCCCCC---------CCCcccceEEechhhHHHHHHHHhcCCC
Q 036830 417 KIAVAENVEAQGLIFINDDEKIWP---------TERGILPYAEVGKVAGFRIINYINSNKN 468 (760)
Q Consensus 417 k~~~~~~~Ga~~~i~~~~~~~~~~---------~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 468 (760)
|..++.++||.++|++|+...... .....+|++.|+.++++.|+..++.+..
T Consensus 62 k~~~A~~~GA~avi~~~~~~g~~~~~~~~~~~~~~~~~IP~v~Is~edg~~L~~~l~~g~~ 122 (127)
T cd04819 62 KYAKAVAAGAAAFVVVNTVPGVLPATGDEGTEDGPPSPIPAASVSGEDGLRLARVAERNDT 122 (127)
T ss_pred HHHHHHHCCCEEEEEEeCCCCcCcccccccccCCCCCCCCEEEEeHHHHHHHHHHHhcCCc
Confidence 789999999999999987665421 1235799999999999999999987543
|
A subgroup of PA-domain containing proteins. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins in this group contain a C-terminal RING-finger domain. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases: such as hSPPL2a and 2b, ii) various E3 ubiquitin ligases similar to human GRAIL (gene related to anergy in lymphocytes) protein, iii) various proteins containing a RING finger motif such as Arabidopsis ReMembR-H2 protein, iv) EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein), v) various plant vacuola |
| >cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.03 Score=50.82 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=49.6
Q ss_pred cccccccCCCCCccccch-------------hhhhhhhcCceEEEEEcCCCCC-C-------CCCCcccceEEechhhHH
Q 036830 399 QASQCLYTTLYPMDTRGR-------------KIAVAENVEAQGLIFINDDEKI-W-------PTERGILPYAEVGKVAGF 457 (760)
Q Consensus 399 ~~~~c~~~~~~~~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~-~-------~~~~~~~p~~~i~~~~g~ 457 (760)
..+.|.+. +..+++|| |..+++++||.++|++|+.... . ......+|+++++.++++
T Consensus 26 p~~gC~~~--~~~~l~gkIvLV~RG~CsF~~K~~nAq~aGA~avII~n~~~~~~~~~m~~~~~~~~v~IPav~Is~~~g~ 103 (117)
T cd04813 26 PTDACSLQ--EHAEIDGKVALVLRGGCGFLDKVMWAQRRGAKAVIVGDDEPGRGLITMFSNGDTDNVTIPAMFTSRTSYH 103 (117)
T ss_pred CCCCCCCC--CcCCcCCeEEEEECCCCCHHHHHHHHHHCCCcEEEEEECCCcccceecccCCCCCCcEEEEEEEcHHHHH
Confidence 34678766 44666666 8999999999999999876642 1 122358999999999999
Q ss_pred HHHHHHhc
Q 036830 458 RIINYINS 465 (760)
Q Consensus 458 ~l~~~~~~ 465 (760)
+|+.++..
T Consensus 104 ~L~~l~~~ 111 (117)
T cd04813 104 LLSSLLPK 111 (117)
T ss_pred HHHHhccc
Confidence 99887654
|
A subgroup of PA-domain containing proteins. Proteins in this subgroup contain a RING-finger (Really Interesting New Gene) domain C-terminal to this PA domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins in this group contain a C-terminal RING-finger domain. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases: such as hSPPL2a and 2b, ii) various E3 ubiquitin ligases similar to human GRAIL (gene related to anergy in lymphocytes) protein, iii) various proteins containing a RING finger motif such as Arabid |
| >cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.034 Score=53.15 Aligned_cols=69 Identities=20% Similarity=0.189 Sum_probs=53.2
Q ss_pred ccccccCCCCC---ccccch-------------hhhhhhhcCceEEEEEcCCCCCC----C-C---CCcccceEEechhh
Q 036830 400 ASQCLYTTLYP---MDTRGR-------------KIAVAENVEAQGLIFINDDEKIW----P-T---ERGILPYAEVGKVA 455 (760)
Q Consensus 400 ~~~c~~~~~~~---~~~~Gk-------------k~~~~~~~Ga~~~i~~~~~~~~~----~-~---~~~~~p~~~i~~~~ 455 (760)
.++|.+....+ ..+.|+ |..+++++||.++|++|+..... . + ....||+++|+..+
T Consensus 50 ~~gC~~~~~~~~~~~~~~g~IvLV~RG~CtF~~Kv~nAq~aGA~avII~n~~~~~~~~m~~~~~~~~~v~IP~v~Is~~d 129 (153)
T cd02123 50 LNACSPIENPPLNSNASGSFIVLIRRGNCSFETKVRNAQRAGYKAAIVYNDESNDLISMSGNDQEIKGIDIPSVFVGKST 129 (153)
T ss_pred cccCCCCcccccccccCCCeEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCcceeccCCCCCCcCCEEEEEEeeHHH
Confidence 45788766533 555555 99999999999999999875532 1 1 13689999999999
Q ss_pred HHHHHHHHhcCCC
Q 036830 456 GFRIINYINSNKN 468 (760)
Q Consensus 456 g~~l~~~~~~~~~ 468 (760)
|+.|+.++.....
T Consensus 130 g~~L~~~l~~~~~ 142 (153)
T cd02123 130 GEILKKYASYEKG 142 (153)
T ss_pred HHHHHHHHhcCCc
Confidence 9999999987654
|
This group includes various PA domain-containing proteins similar to C-RZF (chicken embryo RING zinc finger) protein. These proteins contain a C3H2C3 RING finger. C-RZF is expressed in embryo cells and is restricted mainly to brain and heart, it is localized to both the nucleus and endosomes. Additional C3H2C3 RING finger proteins belonging to this group, include Arabidopsis ReMembR-H2 protein and mouse sperizin. ReMembR-H2 is likely to be an integral membrane protein, and to traffic through the endosomal pathway. Sperizin is expressed in haploid germ cells and localized in the cytoplasm, it may participate in spermatogenesis. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and acce |
| >cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.04 Score=51.48 Aligned_cols=49 Identities=14% Similarity=0.261 Sum_probs=40.2
Q ss_pred hhhhhhhcCceEEEEEcCC--CCCC----CC--CCcccceEEechhhHHHHHHHHhc
Q 036830 417 KIAVAENVEAQGLIFINDD--EKIW----PT--ERGILPYAEVGKVAGFRIINYINS 465 (760)
Q Consensus 417 k~~~~~~~Ga~~~i~~~~~--~~~~----~~--~~~~~p~~~i~~~~g~~l~~~~~~ 465 (760)
|.++++++||.++|+||+. +... .+ ....+|++.|+..+|+.|+..+..
T Consensus 77 Kv~~A~~aGA~avIIyNn~~~~g~~~~~lg~~~~~~~IP~v~is~~dG~~L~~~l~~ 133 (139)
T cd04817 77 KVKACQNAGAIAAIVYSNAALAGLQNPFLVDTNNDTTIPSVSVDRADGQALLAALGQ 133 (139)
T ss_pred HHHHHHHCCCeEEEEEeCCCCCCcccccccCCCCCceEeEEEeeHHHHHHHHHHhcC
Confidence 7899999999999999997 4322 11 136899999999999999998754
|
This group contains various PA domain-containing proteins similar to V. metschnikovii VapT, including the serine alkaline protease SapSh from the psychotroph Shewanella strain Ac10 and the Apa1 protease from the psychrotroph Pseudoalteromonas Sp. As-11. VapT is a sodium dodecyl sulfate (SDS) resistant extracellular alkaline serine protease showing high activity over a broad pH range and temperature. SapSh has a high level of protease activity at low temperatures. Apa1 is also cold-adapted. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. |
| >PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.1 Score=43.57 Aligned_cols=54 Identities=20% Similarity=0.179 Sum_probs=35.4
Q ss_pred eEEEEEEEEecCCCC-eEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEE
Q 036830 677 IRTVKRTVTNVGSPN-ATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFG 730 (760)
Q Consensus 677 ~~t~~rtv~N~~~~~-~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~ 730 (760)
..+++++|+|.|..+ ...++++..|.|-.+...|..+.--++|++++++++|+.
T Consensus 6 ~~~~~~tv~N~g~~~~~~v~~~l~~P~GW~~~~~~~~~~~l~pG~s~~~~~~V~v 60 (78)
T PF10633_consen 6 TVTVTLTVTNTGTAPLTNVSLSLSLPEGWTVSASPASVPSLPPGESVTVTFTVTV 60 (78)
T ss_dssp EEEEEEEEE--SSS-BSS-EEEEE--TTSE---EEEEE--B-TTSEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCceeeEEEEEeCCCCccccCCccccccCCCCCEEEEEEEEEC
Confidence 778999999999755 458888999999998888887753378999888888887
|
It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A. |
| >PF11614 FixG_C: IG-like fold at C-terminal of FixG, putative oxidoreductase; PDB: 2R39_A | Back alignment and domain information |
|---|
Probab=89.69 E-value=7.5 Score=35.14 Aligned_cols=53 Identities=13% Similarity=0.003 Sum_probs=38.5
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEE
Q 036830 677 IRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFG 730 (760)
Q Consensus 677 ~~t~~rtv~N~~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~ 730 (760)
.-.+++++.|.+..+.+|++++..++|+.+......+++ ++|++..+.|.|..
T Consensus 32 ~N~Y~lkl~Nkt~~~~~~~i~~~g~~~~~l~~~~~~i~v-~~g~~~~~~v~v~~ 84 (118)
T PF11614_consen 32 RNQYTLKLTNKTNQPRTYTISVEGLPGAELQGPENTITV-PPGETREVPVFVTA 84 (118)
T ss_dssp EEEEEEEEEE-SSS-EEEEEEEES-SS-EE-ES--EEEE--TT-EEEEEEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEecCCCeEEECCCcceEE-CCCCEEEEEEEEEE
Confidence 445889999999999999999999889999655588888 68899888888888
|
|
| >PF06030 DUF916: Bacterial protein of unknown function (DUF916); InterPro: IPR010317 This family consists of putative cell surface proteins, from Firmicutes, of unknown function | Back alignment and domain information |
|---|
Probab=88.29 E-value=7.8 Score=35.36 Aligned_cols=68 Identities=24% Similarity=0.291 Sum_probs=47.5
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCC----CC-cE-------------------EEEecceeEEeeCceEEEEEEEEEE-e
Q 036830 677 IRTVKRTVTNVGSPNATYISMVNAP----SG-LA-------------------VKVFPQKLTFVEGIIKLSFKASFFG-K 731 (760)
Q Consensus 677 ~~t~~rtv~N~~~~~~~y~~~~~~~----~g-~~-------------------v~v~p~~~~~~~~~~~~~~~vt~~~-~ 731 (760)
+++++++|+|.++...+|.+++... .| +. +++ |..+++ ++++++.++++++. .
T Consensus 28 ~~~l~v~i~N~s~~~~tv~v~~~~A~Tn~nG~I~Y~~~~~~~d~sl~~~~~~~v~~-~~~Vtl-~~~~sk~V~~~i~~P~ 105 (121)
T PF06030_consen 28 KQTLEVRITNNSDKEITVKVSANTATTNDNGVIDYSQNNPKKDKSLKYPFSDLVKI-PKEVTL-PPNESKTVTFTIKMPK 105 (121)
T ss_pred EEEEEEEEEeCCCCCEEEEEEEeeeEecCCEEEEECCCCcccCcccCcchHHhccC-CcEEEE-CCCCEEEEEEEEEcCC
Confidence 7889999999999999999987532 22 11 222 444666 68899998888876 3
Q ss_pred cCCCCceEEEEEEEC
Q 036830 732 EASSGYNYGSITWSD 746 (760)
Q Consensus 732 ~~~~~~~~G~~~~~~ 746 (760)
..-.+.+-|.|.++.
T Consensus 106 ~~f~G~ilGGi~~~e 120 (121)
T PF06030_consen 106 KAFDGIILGGIYFSE 120 (121)
T ss_pred CCcCCEEEeeEEEEe
Confidence 333566778787753
|
|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=85.67 E-value=5.9 Score=43.83 Aligned_cols=69 Identities=19% Similarity=0.203 Sum_probs=53.3
Q ss_pred eEEEEEEEEecCCCCeE-EEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEE--ecCCCCceEEEEEEEC
Q 036830 677 IRTVKRTVTNVGSPNAT-YISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFG--KEASSGYNYGSITWSD 746 (760)
Q Consensus 677 ~~t~~rtv~N~~~~~~~-y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~--~~~~~~~~~G~~~~~~ 746 (760)
..++...+.|.|+.+-| -++++..|.|-++.|+|..+---++++++++.+|++. .+.++.| +=+|+-+.
T Consensus 398 e~~i~i~I~NsGna~LtdIkl~v~~PqgWei~Vd~~~I~sL~pge~~tV~ltI~vP~~a~aGdY-~i~i~~ks 469 (513)
T COG1470 398 EKTIRISIENSGNAPLTDIKLTVNGPQGWEIEVDESTIPSLEPGESKTVSLTITVPEDAGAGDY-RITITAKS 469 (513)
T ss_pred cceEEEEEEecCCCccceeeEEecCCccceEEECcccccccCCCCcceEEEEEEcCCCCCCCcE-EEEEEEee
Confidence 67788899999987755 7899999999999999987654478888888888887 4444544 45555544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 760 | ||||
| 3vta_A | 621 | Crystal Structure Of Cucumisin, A Subtilisin-Like E | 1e-110 | ||
| 3i6s_A | 649 | Crystal Structure Of The Plant Subtilisin-Like Prot | 1e-93 | ||
| 3eif_A | 936 | 1.9 Angstrom Crystal Structure Of The Active Form O | 5e-12 | ||
| 3afg_A | 539 | Crystal Structure Of Pron-Tk-Sp From Thermococcus K | 4e-09 | ||
| 3f49_S | 266 | Anion-Triggered Engineered Subtilisin Subt_bacam Le | 1e-07 | ||
| 1dui_A | 266 | Subtilisin Bpn' From Bacillus Amyloliquefaciens, Cr | 2e-07 | ||
| 3cnq_S | 266 | Prosubtilisin Substrate Complex Of Subtilisin Subt_ | 2e-07 | ||
| 1s01_A | 275 | Large Increases In General Stability For Subtilisin | 3e-07 | ||
| 1sue_A | 266 | Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mu | 3e-07 | ||
| 1aqn_A | 275 | Subtilisin Mutant 8324 Length = 275 | 4e-07 | ||
| 1spb_S | 266 | Subtilisin Bpn' Prosegment (77 Residues) Complexed | 4e-07 | ||
| 1sua_A | 266 | Subtilisin Bpn' Length = 266 | 4e-07 | ||
| 1xf1_A | 926 | Structure Of C5a Peptidase- A Key Virulence Factor | 4e-07 | ||
| 1ak9_A | 275 | Subtilisin Mutant 8321 Length = 275 | 4e-07 | ||
| 1gnv_A | 266 | Calcium Independent Subtilisin Bpn' Mutant Length = | 1e-06 | ||
| 1sbi_A | 275 | Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, | 1e-06 | ||
| 1suc_A | 275 | Calcium-Independent Subtilisin By Design Length = 2 | 1e-06 | ||
| 1yjb_A | 275 | Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant Wit | 1e-06 | ||
| 1gns_A | 263 | Subtilisin Bpn' Length = 263 | 1e-06 | ||
| 2sbt_A | 275 | A Comparison Of The Three-Dimensional Structures Of | 2e-06 | ||
| 2sni_E | 275 | Structural Comparison Of Two Serine Proteinase-Prot | 2e-06 | ||
| 1mee_A | 275 | The Complex Between The Subtilisin From A Mesophili | 2e-06 | ||
| 1lw6_E | 281 | Crystal Structure Of The Complex Of Subtilisin Bpn' | 3e-06 | ||
| 1s02_A | 275 | Effects Of Engineered Salt Bridges On The Stability | 3e-06 | ||
| 2sic_E | 275 | Refined Crystal Structure Of The Complex Of Subtili | 3e-06 | ||
| 4dww_A | 275 | Crystal Structure Of Nattokinase From Bacillus Subt | 3e-06 | ||
| 1scj_A | 275 | Crystal Structure Of Subtilisin-Propeptide Complex | 3e-06 | ||
| 1sub_A | 275 | Calcium-Independent Subtilisin By Design Length = 2 | 3e-06 | ||
| 1wsd_A | 269 | Alkaline M-Protease Form I Crystal Strcuture Length | 3e-06 | ||
| 1ah2_A | 269 | Serine Protease Pb92 From Bacillus Alcalophilus, Nm | 4e-06 | ||
| 1ndu_A | 269 | Bacillus Lentus Subtilisin Variant S101gV104N Lengt | 4e-06 | ||
| 1a2q_A | 275 | Subtilisin Bpn' Mutant 7186 Length = 275 | 4e-06 | ||
| 1st3_A | 269 | The Crystal Structure Of The Bacillus Lentus Alkali | 4e-06 | ||
| 1c9j_A | 269 | Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A | 4e-06 | ||
| 1ndq_A | 269 | Bacillus Lentus Subtilisin Length = 269 | 4e-06 | ||
| 1ubn_A | 275 | Selenosubtilisin Bpn Length = 275 | 8e-06 | ||
| 1v5i_A | 275 | Crystal Structure Of Serine Protease Inhibitor Poia | 8e-06 | ||
| 1iav_A | 269 | Structure On Native (Asn 87) Subtilisin From Bacill | 1e-05 | ||
| 1q5p_A | 269 | S156e/s166d Variant Of Bacillus Lentus Subtilisin L | 1e-05 | ||
| 1c9n_A | 269 | Bacillus Lentus Substilisin Variant (Ser 87) K27rV1 | 1e-05 | ||
| 1c9m_A | 269 | Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I L | 1e-05 | ||
| 1st2_A | 275 | The Three-Dimensional Structure Of Bacillus Amyloli | 2e-05 |
| >pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 | Back alignment and structure |
|
| >pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 | Back alignment and structure |
|
| >pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The C5a Peptidase From Streptococcus Pyogenes (Scpa) Length = 936 | Back alignment and structure |
|
| >pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus Kodakaraensis Length = 539 | Back alignment and structure |
|
| >pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam Length = 266 | Back alignment and structure |
|
| >pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal Growth Mutant Length = 266 | Back alignment and structure |
|
| >pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam Length = 266 | Back alignment and structure |
|
| >pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin Bpn(Prime) Through Incremental Changes In The Free Energy Of Unfolding Length = 275 | Back alignment and structure |
|
| >pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant Length = 266 | Back alignment and structure |
|
| >pdb|1AQN|A Chain A, Subtilisin Mutant 8324 Length = 275 | Back alignment and structure |
|
| >pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6. Crystallization Temperature 20 C Diffraction Temperature- 160 C Length = 266 | Back alignment and structure |
|
| >pdb|1SUA|A Chain A, Subtilisin Bpn' Length = 266 | Back alignment and structure |
|
| >pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From Streptococcus Length = 926 | Back alignment and structure |
|
| >pdb|1AK9|A Chain A, Subtilisin Mutant 8321 Length = 275 | Back alignment and structure |
|
| >pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant Length = 266 | Back alignment and structure |
|
| >pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d, G169a, Q206c, N218s) Length = 275 | Back alignment and structure |
|
| >pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 | Back alignment and structure |
|
| >pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met 50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169 Replaced By Ala, Gln 206 Replaced By Cys, Asn 218 Replaced By Ser And Lys 256 Replaced By Tyr) (M50f, N76d, G169a, Q206c, N218s, And K256y) In 35% Dimethylformamide Length = 275 | Back alignment and structure |
|
| >pdb|1GNS|A Chain A, Subtilisin Bpn' Length = 263 | Back alignment and structure |
|
| >pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of Subtilisin Bpn And Subtilisin Novo Length = 275 | Back alignment and structure |
|
| >pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And Ci-2- Subtilisin Novo Length = 275 | Back alignment and structure |
|
| >pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic Bacterium And The Leech Inhibitor Eglin-C Length = 275 | Back alignment and structure |
|
| >pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 281 | Back alignment and structure |
|
| >pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of Subtilisin Bpn' Length = 275 | Back alignment and structure |
|
| >pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin Bpn' And Streptomyces Subtilisin Inhibitor At 1.8 Angstroms Resolution Length = 275 | Back alignment and structure |
|
| >pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis Natto Length = 275 | Back alignment and structure |
|
| >pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex Length = 275 | Back alignment and structure |
|
| >pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 | Back alignment and structure |
|
| >pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture Length = 269 | Back alignment and structure |
|
| >pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18 Structures Length = 269 | Back alignment and structure |
|
| >pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N Length = 269 | Back alignment and structure |
|
| >pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186 Length = 275 | Back alignment and structure |
|
| >pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline Protease, Subtilisin Bl, At 1.4 Angstroms Resolution Length = 269 | Back alignment and structure |
|
| >pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant Length = 269 | Back alignment and structure |
|
| >pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin Length = 269 | Back alignment and structure |
|
| >pdb|1UBN|A Chain A, Selenosubtilisin Bpn Length = 275 | Back alignment and structure |
|
| >pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In Complex With Subtilisin Bpn' Length = 275 | Back alignment and structure |
|
| >pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus Lentus Length = 269 | Back alignment and structure |
|
| >pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin Length = 269 | Back alignment and structure |
|
| >pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87) K27rV104YN123ST274A Length = 269 | Back alignment and structure |
|
| >pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I Length = 269 | Back alignment and structure |
|
| >pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus Amyloliquefaciens Subtilisin At 1.8 Angstroms And An Analysis Of The Structural Consequences Of Peroxide Inactivation Length = 275 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 | Back alignment and structure |
|---|
Score = 596 bits (1537), Expect = 0.0
Identities = 245/648 (37%), Positives = 350/648 (54%), Gaps = 42/648 (6%)
Query: 121 TTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWK 180
TTRSWDFL + + + S+IV+GV+DTGIWPESPSF+D+G P +WK
Sbjct: 1 TTRSWDFLGFPLTVPRRS-------QVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWK 53
Query: 181 GVCMESPDFKKSHCNRKLIGAR-HCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNA 239
G C S +F CNRK+IGAR + + + RD GHGTHTASTAAG VS A
Sbjct: 54 GTCETSNNF---RCNRKIIGARSYHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQA 110
Query: 240 IYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSE 299
+GL GTARGG P +RIA+YK C GCS IL A DDAI DGVDIIS+S+G +
Sbjct: 111 NLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVG-GANP 169
Query: 300 ADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVL 359
Y D IAIG+ HA +RG++ SAGN GP FT A+ +PWL +VAAST+DR F + V
Sbjct: 170 RHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQ 229
Query: 360 LGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR--- 416
+GNG++ +G +I+ + ++ YPL G+ I S + C ++ P +G+
Sbjct: 230 IGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVV 286
Query: 417 -------KIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNP 469
A G++ ++ + LP + + + YI S ++P
Sbjct: 287 CEASFGPHEFFKSLDGAAGVLMTSNTRDY--ADSYPLPSSVLDPNDLLATLRYIYSIRSP 344
Query: 470 TATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGI 529
ATI + TI APVV FSSRGP T++++KPD++ PGV +LAA +
Sbjct: 345 GATIFKSTTILN-ASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPS----VAPV 399
Query: 530 PAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLT 589
+ + + SGTSM+CPH+TG A ++K+ W+ + IKSALMTTA+ + P
Sbjct: 400 GGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNP-- 457
Query: 590 NSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNC 649
G+G +NPLKA+ PGLV+ DY++FLC GY+ + +R +T C
Sbjct: 458 ------QAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSAC 511
Query: 650 PKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVF 709
++ + + ++NYPS +S Q + RT+T+V +TY +M++AP GL + V
Sbjct: 512 TSGNTGR-VWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVN 570
Query: 710 PQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDDRHSVRMMFAV 757
P L+F + SF + G S+ WSD H VR +
Sbjct: 571 PNVLSFNGLGDRKSFTLTVRGS-IKGFVVSASLVWSDGVHYVRSPITI 617
|
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 | Back alignment and structure |
|---|
Score = 596 bits (1537), Expect = 0.0
Identities = 228/653 (34%), Positives = 330/653 (50%), Gaps = 27/653 (4%)
Query: 121 TTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWK 180
TT + DFL P+ W D+++ V+D+GIWPES SF D GM EIP RWK
Sbjct: 1 TTHTSDFLKL--NPSSGLWPASGL---GQDVIVAVLDSGIWPESASFQDDGMPEIPKRWK 55
Query: 181 GVCMESPDFKKSHCNRKLIGARHCSRASTNKDNS-----GSSRDPLGHGTHTASTAAGNY 235
G+C F S CNRKLIGA + ++ D + S+RD GHGTH AS AGN+
Sbjct: 56 GICKPGTQFNASMCNRKLIGANYFNKGILANDPTVNITMNSARDTDGHGTHCASITAGNF 115
Query: 236 VSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGL 295
+FG A GTARG +P +R+A YK G + ++ A+D A+ DGVD+ISIS
Sbjct: 116 AKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQAVADGVDMISISY-- 173
Query: 296 SNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQ 355
D I+I + A +GV+V SAGN GP ++ N +PW+ VA+ DR F
Sbjct: 174 GYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFA 233
Query: 356 STVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRG 415
T+ LGNG I+G ++ + + P+ Y K ++ S+ + +
Sbjct: 234 GTLTLGNGLKIRGWSLF-PARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDN 292
Query: 416 ----RKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTA 471
++ + + IFI++D ++ + P V K G ++INY+ ++ PTA
Sbjct: 293 GDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTA 352
Query: 472 TILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPA 531
TI T +PAPVVA S+RGP I KPD+ APGV +LAA P
Sbjct: 353 TITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTN 412
Query: 532 GEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTN- 590
Y L SGTSMA PH G AA +K+ +W+ S I+SA+MTTA DNT P+ +
Sbjct: 413 ILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDS 472
Query: 591 SSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCP 650
+ A P +MGAG ++P +AL+PGLV+ T +DY+ LC ++++ +++ ++ +
Sbjct: 473 DNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHN 532
Query: 651 KKSSAKLISNINYPSISISKLARQG---AIRTVKRTVTNVGSPNATYISMVNAPSGLAVK 707
+ + +++NYPS + KRTVTNVG ATY + + AP +
Sbjct: 533 CSNPS---ADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTIS 589
Query: 708 VFPQKLTFVEGIIKLSFKASFFGKEASSG-YNYGSITW--SDDRHSVRMMFAV 757
V PQ L F K S+ + N GSITW + HSVR
Sbjct: 590 VSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVT 642
|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 | Back alignment and structure |
|---|
Score = 421 bits (1083), Expect = e-135
Identities = 108/618 (17%), Positives = 203/618 (32%), Gaps = 67/618 (10%)
Query: 142 HKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKK----SHCNRK 197
+ + V+ VID G ++ + + K ++ N K
Sbjct: 10 QEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEWVNDK 69
Query: 198 LIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSR 257
+ + G + HGTH + +GN A G P ++
Sbjct: 70 VAYYH-------DYSKDGKTAVDQEHGTHVSGILSGN----APSETKEPYRLEGAMPEAQ 118
Query: 258 IASYKACKEGGCSG--AAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQ 315
+ + G + QAI DAI+ G +I++S G + + D +A+
Sbjct: 119 LLLMRVEIVNGLADYARNYAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAK 178
Query: 316 QRGVVVICSAGNDGPYPFTVA---NTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372
+GV ++ SAGND + P V + K + T
Sbjct: 179 SKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRV 238
Query: 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAV-----------A 421
+ + K P+ N + D +G KIA+
Sbjct: 239 KTADQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKG-KIALIERGDIDFKDKI 297
Query: 422 ENVE---AQGLIFINDDEKIWPTERG---ILPYAEVGKVAGFRIINYINSNKNPTATILP 475
+ A G++ ++ +K +P E +P A + + G + + T T
Sbjct: 298 AKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKDNPQK----TITFNA 353
Query: 476 TVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKP 535
T + ++ FSS G + +KPD+AAPG +L+++
Sbjct: 354 TPKVLPTASGTKLSRFSSWGL--TADGNIKPDIAAPGQDILSSV------ANN------- 398
Query: 536 ATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTA-TVYDNTGTPLTNSSGN 594
YA SGTSM+ P V G ++ M S + A V ++ T L +
Sbjct: 399 -KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDEK 457
Query: 595 N-ANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNI---RSMTNTTFNCP 650
+P + GAG ++ KA + T KD + ++ N + + P
Sbjct: 458 AYFSPRQQGAGAVDAKKASAATMY--VTDKDNTSSKVHLNNVSDKFEVTVNVHNKS-DKP 514
Query: 651 KKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLA-VKVF 709
++ + + LA + T + +T + + ++A +
Sbjct: 515 QELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQ 574
Query: 710 PQKLTFVEGIIKLSFKAS 727
+ F+EG ++ +
Sbjct: 575 MKNGYFLEGFVRFKQDPT 592
|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-29
Identities = 81/489 (16%), Positives = 152/489 (31%), Gaps = 104/489 (21%)
Query: 147 AASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSR 206
A + I +ID+G N G +
Sbjct: 20 QAGNRTICIIDSGYDRSHNDLNANN-------VTGT-----NN----------------- 50
Query: 207 ASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-K 265
+ N + HGTH A T A + + G+ + I K +
Sbjct: 51 --SGTGNWYQPGNNNAHGTHVAGTIAAIANNEGVV-GVMPNQN------ANIHIVKVFNE 101
Query: 266 EGGCSGAAILQAIDDAI-HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICS 324
G ++++ AID + G +++++S+G + + + GV++I +
Sbjct: 102 AGWGYSSSLVAAIDTCVNSGGANVVTMSLG-GSGSTTTERNALN----THYNNGVLLIAA 156
Query: 325 AGNDGP----YPFTVANTAPWLFTVAASTIDR---DFQSTVLLGNGKAIKGTAISLSNLS 377
AGN G YP A+ + +VAA + F + +S
Sbjct: 157 AGNAGDSSYSYP---AS-YDSVMSVAAVDSNLDHAAFSQY----------TDQVEIS--- 199
Query: 378 RSKTYPLAYGKAIAVNSTLVSQASQCLYTTL------YPMDTRGRKIAVAENVEAQGLIF 431
G+AI ST+ + T+ ++ + A I
Sbjct: 200 -------GPGEAIL--STVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPIN 250
Query: 432 INDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYF 491
+ + ++ ++ + + + I T ++ Y
Sbjct: 251 ASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYS 310
Query: 492 SSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT-------YALRSGT 544
+S PGL + D + ++ G+ Y +GT
Sbjct: 311 NSALPGLQNPFL--VDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGT 368
Query: 545 SMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAG 604
SMA PHV+G A + S + + S +++AL TA L+ + +N + G G
Sbjct: 369 SMATPHVSGVATLVWSYHPECSASQVRAALNATA-------DDLSVAGRDN----QTGYG 417
Query: 605 EINPLKALN 613
IN + A
Sbjct: 418 MINAVAAKA 426
|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 2e-22
Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+ FSSRGP +N LKP+V APG ++AA G Y GT+MA
Sbjct: 309 ITDFSSRGPTA--DNRLKPEVVAPGNWIIAAR-----ASGTSMGQPINDYYTAAPGTAMA 361
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV G AA + WT +K+AL+ TA + + GAG +N
Sbjct: 362 TPHVAGIAALLLQAHPSWTPDKVKTALIETAD--IVKPDEIADI--------AYGAGRVN 411
Query: 608 PLKALNPGLVFKTTIKDYL 626
KA K T Y+
Sbjct: 412 AYKAAYYDNYAKLTFTGYV 430
|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 7e-20
Identities = 64/269 (23%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 92 AILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDI 151
A L D+ + V + D V+++ +AA A N W S I
Sbjct: 85 AGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMW---NLGYDGSGI 141
Query: 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNK 211
IG+IDTGI P + +G + DF
Sbjct: 142 TIGIIDTGIDASHPDLQGKVIGWV------------DFV--------------------- 168
Query: 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEGGCS 270
+ + D GHGTH AS AAG ++ G +G +P +++ K +G S
Sbjct: 169 NGKTTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGS 221
Query: 271 GAAILQAID----DAIHDGVDIISISIG--LSNSEADYMNDPIAIGALHAQQRGVVVICS 324
+ I+ +D + G+ +I++S+G S+ D ++ + +A G+VV+ +
Sbjct: 222 ISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVN----NAWDAGLVVVVA 277
Query: 325 AGNDGPYPFTVAN--TAPWLFTVAASTID 351
AGN GP +TV + A + TV A
Sbjct: 278 AGNSGPNKYTVGSPAAASKVITVGAVDKY 306
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 | Back alignment and structure |
|---|
Score = 99 bits (248), Expect = 1e-21
Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 30/152 (19%)
Query: 481 RHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYAL 540
R + V ++SR P + V APG A+ + P L
Sbjct: 412 REKLPGNVYTWTSRDPC--IDGGQGVTVCAPGGAIASV----PQFTMS--------KSQL 457
Query: 541 RSGTSMACPHVTGAAAFIKSVRR----KWTYSMIKSALMTTATVYDNTGTPLTNSSGNNA 596
+GTSMA PHV GA A + S + +++ IK A+ TAT
Sbjct: 458 MNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTAT------------KLGYV 505
Query: 597 NPHEMGAGEINPLKALNPGLVFKTTIKDYLRF 628
+P G G +N KA + + + LRF
Sbjct: 506 DPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRF 537
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 | Back alignment and structure |
|---|
Score = 93.7 bits (232), Expect = 1e-19
Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 24/178 (13%)
Query: 210 NKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGC 269
+ HGTH +S A+GN+ + G +P ++I S
Sbjct: 259 EGNVLEVVGMSSPHGTHVSSIASGNH---------SSRDVDGVAPNAKIVSMTIGDGRLG 309
Query: 270 ---SGAAILQAIDDAI-----HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVV 321
+G A+++A+ + +D+I++S G + ++ + + + GVV
Sbjct: 310 SMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELMNEV-VNKYGVVW 368
Query: 322 ICSAGNDGPYPFTVAN----TAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375
+ SAGN GP TV + P L V A + + G + ++
Sbjct: 369 VASAGNHGPALCTVGTPPDISQPSLIGVGAY--VSPQMMEAEYAMREKLPGNVYTWTS 424
|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 1e-20
Identities = 33/135 (24%), Positives = 49/135 (36%), Gaps = 22/135 (16%)
Query: 477 VTIPRHRPAPVVAYFSSRGP----GLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532
+ + VA +SSRG G +++APG +V + G
Sbjct: 192 LENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYST------WYNG---- 241
Query: 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSS 592
Y SGTSMA PHV+G AA I + + + ++S L A D G
Sbjct: 242 ----GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGY----G 293
Query: 593 GNNANPHEMGAGEIN 607
+ + G G
Sbjct: 294 AAIGDDYASGFGFAR 308
|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 7e-17
Identities = 48/219 (21%), Positives = 76/219 (34%), Gaps = 49/219 (22%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S I I V+DTG+ P + + DF
Sbjct: 26 SGINIAVLDTGVNTSHPDLVNNV-------EQCK-----DF-----------------TG 56
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ S D GHGTH A TA + S+ G +P + + +YK G
Sbjct: 57 ATTPINNSCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSG 109
Query: 268 GCSGAAILQAIDDAIHDGV-----DIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVI 322
I AI A IIS+S+G S++ ++ + +A +GV+++
Sbjct: 110 SGYSDDIAAAIRHAADQATATGTKTIISMSLG-SSANNSLISSAVN----YAYSKGVLIV 164
Query: 323 CSAGNDGPYPFTVAN--TAPWLFTVAASTIDRDFQSTVL 359
+AGN G T+ P VAA + + +
Sbjct: 165 AAAGNSGYSQGTIGYPGALPNAIAVAALENVQQNGTYRV 203
|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 5e-20
Identities = 42/126 (33%), Positives = 53/126 (42%), Gaps = 36/126 (28%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
A FSS GP + DV APGV++ + + PG Y +GTSMA
Sbjct: 186 RASFSSVGP--------ELDVMAPGVSIQSTL------PGN--------KYGAYNGTSMA 223
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV GAAA I S WT + ++S+L T T L +S G G IN
Sbjct: 224 SPHVAGAAALILSKHPNWTNTQVRSSLENTT-------TKLGDSF-------YYGKGLIN 269
Query: 608 PLKALN 613
A
Sbjct: 270 VQAAAQ 275
|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 5e-18
Identities = 46/208 (22%), Positives = 77/208 (37%), Gaps = 53/208 (25%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S++ + VID+GI P G AS
Sbjct: 24 SNVKVAVIDSGIDSSHPDLKVAG----------------------------------GAS 49
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ +D HGTH A T A ++N+I G G +P + + + K +G
Sbjct: 50 MVPSETNPFQDNNSHGTHVAGTVAA--LNNSI------GVL-GVAPSASLYAVKVLGADG 100
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
+ I+ I+ AI + +D+I++S+G S + + + A GVVV+ +AGN
Sbjct: 101 SGQYSWIINGIEWAIANNMDVINMSLG-GPSGSAALKAAVD----KAVASGVVVVAAAGN 155
Query: 328 DGPYPFTVANT----APWLFTVAASTID 351
+G + P + V A
Sbjct: 156 EGTSGSSSTVGYPGKYPSVIAVGAVDSS 183
|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 7e-20
Identities = 57/307 (18%), Positives = 92/307 (29%), Gaps = 81/307 (26%)
Query: 79 LIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNT 138
+++ +K + + L V V D L SW +
Sbjct: 26 IVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIP 84
Query: 139 WFNHK---------YHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDF 189
W + + S I + V+DTG+ + P V
Sbjct: 85 WGIERVKAPSVWSITDGSVSVIQVAVLDTGVDYDHPDLAANI-------AWCVSTLRGKV 137
Query: 190 KKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTA 249
D GHGTH T A ++N I G
Sbjct: 138 ---------------------STKLRDCADQNGHGTHVIGTIAA--LNNDI------GVV 168
Query: 250 RGGSPFSRIASYKAC-KEGGCSGAAILQAIDDAIHD--------------------GVDI 288
G +P +I S + G S + I I+ AI ++
Sbjct: 169 -GVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEV 227
Query: 289 ISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGP----YPFTVANTAPWLFT 344
IS+S+G ++ Y+ D I A G+V++ ++GN+G YP A P +
Sbjct: 228 ISMSLG-GPADDSYLYDMII----QAYNAGIVIVAASGNEGAPSPSYP---AA-YPEVIA 278
Query: 345 VAASTID 351
V A +
Sbjct: 279 VGAIDSN 285
|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 2e-15
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 34/132 (25%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+A FS+R P +V+APGV +L+ P +Y GT+MA
Sbjct: 288 IASFSNRQP----------EVSAPGVDILSTY------PDD--------SYETLMGTAMA 323
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYD------NTGTPLTNSSGNNANPHEM 601
PHV+G A I++ + ++ + T L + +
Sbjct: 324 TPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTGWDADY---- 379
Query: 602 GAGEINPLKALN 613
G G + A+
Sbjct: 380 GYGVVRAALAVQ 391
|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 8e-20
Identities = 38/125 (30%), Positives = 48/125 (38%), Gaps = 36/125 (28%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
A FSS G + +V APG V + P TYA +GTSMA
Sbjct: 185 RASFSSVGA--------ELEVMAPGAGVYST------YPTN--------TYATLNGTSMA 222
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV GAAA I S + S +++ L +TAT + G G IN
Sbjct: 223 SPHVAGAAALILSKHPNLSASQVRNRLSSTAT--------------YLGSSFYYGKGLIN 268
Query: 608 PLKAL 612
A
Sbjct: 269 VEAAA 273
|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 4e-18
Identities = 46/208 (22%), Positives = 73/208 (35%), Gaps = 54/208 (25%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+++ + V+DTGI P N G F
Sbjct: 24 ANVKVAVLDTGIQASHPDLNVVG--------------GASFV------------------ 51
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ D GHGTH A T A + + G +P + + K G
Sbjct: 52 ---AGEAYNTDGNGHGTHVAGTVAALDNTTGVL---------GVAPSVSLYAVKVLNSSG 99
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
S + I+ I+ A +G+D+I++S+G S + M + +A RGVVV+ +AGN
Sbjct: 100 SGSYSGIVSGIEWATTNGMDVINMSLG-GASGSTAMKQAVD----NAYARGVVVVAAAGN 154
Query: 328 DGPYPFTVANT----APWLFTVAASTID 351
G T + V A +
Sbjct: 155 SGNSGSTNTIGYPAKYDSVIAVGAVDSN 182
|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 2e-19
Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 36/125 (28%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
A FS G D+ APGV V + PG TYA +GTSMA
Sbjct: 180 RASFSQYGA--------GLDIVAPGVNVQST------YPGS--------TYASLNGTSMA 217
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV GAAA +K W+ I++ L TAT + + + G+G +N
Sbjct: 218 TPHVAGAAALVKQKNPSWSNVQIRNHLKNTAT--------------SLGSTNLYGSGLVN 263
Query: 608 PLKAL 612
A
Sbjct: 264 AEAAT 268
|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 3e-16
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 23/145 (15%)
Query: 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEGGCS 270
S++D GHGTH A T A S + G +P + + + K G S
Sbjct: 51 PGEPSTQDGNGHGTHVAGTIAALNNSIGVL---------GVAPSAELYAVKVLGASGSGS 101
Query: 271 GAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGP 330
++I Q ++ A ++G+ + ++S+G S S + + + A RGV+V+ ++GN G
Sbjct: 102 VSSIAQGLEWAGNNGMHVANLSLG-SPSPSATLEQAVN----SATSRGVLVVAASGNSGA 156
Query: 331 ----YPFTVANTAPWLFTVAASTID 351
YP A V A+ +
Sbjct: 157 GSISYP---AR-YANAMAVGATDQN 177
|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 | Back alignment and structure |
|---|
Score = 90.9 bits (225), Expect = 5e-19
Identities = 36/137 (26%), Positives = 48/137 (35%), Gaps = 23/137 (16%)
Query: 481 RHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAI----VPRPDRPGGIPAGEKPA 536
+ VA FSSR G+ V APGV +L+ + +
Sbjct: 321 YYGGTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGG 372
Query: 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNA 596
TY GTSMA PHVTG A + I+ L TA ++ G
Sbjct: 373 TYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW---------- 422
Query: 597 NPHEMGAGEINPLKALN 613
H+ G G + AL
Sbjct: 423 -DHDTGYGLVKLDAALQ 438
|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 | Back alignment and structure |
|---|
Score = 77.4 bits (190), Expect = 8e-15
Identities = 41/215 (19%), Positives = 63/215 (29%), Gaps = 58/215 (26%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
++I++ V+DTG+ P Q G
Sbjct: 154 TNIIVAVVDTGVDGTHPDLEGQV-------IAG-----YRPA----------------FD 185
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC---- 264
S GTH A T A + G G +P ++I
Sbjct: 186 EELPAGTDSSYGGSAGTHVAGTIAA--KKDGK-----GIV--GVAPGAKIMPIVIFDDPA 236
Query: 265 ---KEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVV 321
G + I A G +++ S G + M + +A + GVV+
Sbjct: 237 LVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWG-GWGYSYTMKEAFD----YAMEHGVVM 291
Query: 322 ICSAGNDGP-----YPFTVANTAPWLFTVAASTID 351
+ SAGN+ YP A P + VAA
Sbjct: 292 VVSAGNNTSDSHHQYP---AG-YPGVIQVAALDYY 322
|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 | Back alignment and structure |
|---|
Score = 88.9 bits (220), Expect = 9e-19
Identities = 45/247 (18%), Positives = 80/247 (32%), Gaps = 46/247 (18%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
++ V DTG+ + F+ A
Sbjct: 22 QGQIVAVADTGLDTGRNDSSMH----------------EAFRGKI------------TAL 53
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ ++ D GHGTH A + GN G T +G +P + + G
Sbjct: 54 YALGRTNNANDTNGHGTHVAGSVLGN-----------GSTNKGMAPQANLVFQSIMDSGG 102
Query: 268 GCSG--AAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSA 325
G G + + A G I + S G + + A + ++ + ++ +A
Sbjct: 103 GLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVNGAYTTDSRNVDDY--VRKNDMTILFAA 160
Query: 326 GNDGPYPFTVAN--TAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYP 383
GN+GP T++ TA TV A+ R + + ++ + R K
Sbjct: 161 GNEGPNGGTISAPGTAKNAITVGATENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDV 220
Query: 384 LAYGKAI 390
+A G I
Sbjct: 221 MAPGTFI 227
|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 | Back alignment and structure |
|---|
Score = 88.5 bits (219), Expect = 1e-18
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
VA FSSRGP + +KPDV APG +L+A P + YA GTSMA
Sbjct: 202 VAQFSSRGPT--KDGRIKPDVMAPGTFILSA--RSSLAPDSSFWANHDSKYAYMGGTSMA 257
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
P V G A ++ K K +L+ A + + N G G +
Sbjct: 258 TPIVAGNVAQLREHFVKNRGITPKPSLLKAALI--AGAADIGLGYPNG----NQGWGRVT 311
Query: 608 PLKALNPGLVFKTT 621
K+LN V +++
Sbjct: 312 LDKSLNVAYVNESS 325
|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 1e-18
Identities = 53/215 (24%), Positives = 81/215 (37%), Gaps = 55/215 (25%)
Query: 142 HKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGA 201
K +S I VIDTG+ P + + KG DF
Sbjct: 24 WDVTKGSSGQEIAVIDTGVDYTHPDLDGK-------VIKGY-----DFV----------- 60
Query: 202 RHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASY 261
DN D HGTH A AA +NA G A G +P +RI +
Sbjct: 61 ----------DNDYDPMDLNNHGTHVAGIAAAET-NNAT------GIA-GMAPNTRILAV 102
Query: 262 KAC-KEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVV 320
+A + G + + I AI A G ++I++S+G + + + + +A +G V
Sbjct: 103 RALDRNGSGTLSDIADAIIYAADSGAEVINLSLG-CDCHTTTLENAVN----YAWNKGSV 157
Query: 321 VICSAGNDGP----YPFTVANTAPWLFTVAASTID 351
V+ +AGN+G P A+ + V A
Sbjct: 158 VVAAAGNNGSSTTFEP---AS-YENVIAVGAVDQY 188
|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 3e-17
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 37/126 (29%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+A FS+ G + DV APGV +++ I G YA SGTSMA
Sbjct: 191 LASFSNYGTWV--------DVVAPGVDIVSTI------TGN--------RYAYMSGTSMA 228
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV G AA + S + I+ A+ TA TGT G IN
Sbjct: 229 SPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGTGT-------------YFKYGRIN 273
Query: 608 PLKALN 613
A+
Sbjct: 274 SYNAVT 279
|
| >4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 2e-18
Identities = 39/270 (14%), Positives = 72/270 (26%), Gaps = 40/270 (14%)
Query: 100 SALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTG 159
+ S + L + I I +ID
Sbjct: 3 DEIESAGVSASEVESSATKQKVALHPHDLDERIPGLADLH---NQTLGDPQITIVIIDGD 59
Query: 160 IWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIG----ARHCSRASTN-KDNS 214
F + ++ W E + + + + A ++
Sbjct: 60 PDYTLSCFEGAEVSKVFPYWHEP-AEPITPEDYAAFQSIRDQGLKGKEKEEALEAVIPDT 118
Query: 215 GSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG------ 268
H H ST G ++ FG+A P R+ +
Sbjct: 119 KDRIVLNDHACHVTSTIVG--QEHSPVFGIA--------PNCRVINMPQDAVIRGNYDDV 168
Query: 269 CSGAAILQAIDDAIHDGVDIISISIG---LSNSEADYMNDPIAIGALHAQQRGVVVICSA 325
S + +AID A+ G +II + ++ + + I Q V+++
Sbjct: 169 MSPLNLARAIDLALELGANIIHCAFCRPTQTSEGEEILVQAIK----KCQDNNVLIVSPT 224
Query: 326 GNDGP----YPFTVANTAPWLFTVAASTID 351
GN+ P A P V A+ +D
Sbjct: 225 GNNSNESWCLP---AV-LPGTLAVGAAKVD 250
|
| >4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 3e-18
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 31/130 (23%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+FS+ G K + APG +L A P +GTSMA
Sbjct: 253 PCHFSNWGGNNT-----KEGILAPGEEILGAQ------PCT-------EEPVRLTGTSMA 294
Query: 548 CPHVTGAAAFIKSVRRK----WTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGA 603
P +TG +A + S++ + +++AL+ TA D P
Sbjct: 295 APVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEVV---------EEPERCLR 345
Query: 604 GEINPLKALN 613
G +N A+
Sbjct: 346 GFVNIPGAMK 355
|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 3e-18
Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 55/208 (26%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S I ++DTG+ P + +G DF
Sbjct: 30 SGAKIAIVDTGVQSNHPDLAGKVVGGW------------DFV------------------ 59
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
DN + ++ GHGTH A AA +N+ G A G +P + I + + G
Sbjct: 60 ---DNDSTPQNGNGHGTHCAGIAAAVT-NNST------GIA-GTAPKASILAVRVLDNSG 108
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
+ A+ I A G +IS+S+G + + +A +G VV+ +AGN
Sbjct: 109 SGTWTAVANGITYAADQGAKVISLSLG-GTVGNSGLQQAVN----YAWNKGSVVVAAAGN 163
Query: 328 DGP----YPFTVANTAPWLFTVAASTID 351
G YP A VA++ +
Sbjct: 164 AGNTAPNYP---AY-YSNAIAVASTDQN 187
|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 9e-18
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 37/126 (29%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+ FS+ G + DVAAPG ++ + P TYA SGTSMA
Sbjct: 190 KSSFSTYGSWV--------DVAAPGSSIYSTY------PTS--------TYASLSGTSMA 227
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV G A + S + + S I++A+ TA TGT G +N
Sbjct: 228 TPHVAGVAGLLAS--QGRSASNIRAAIENTADKISGTGT-------------YWAKGRVN 272
Query: 608 PLKALN 613
KA+
Sbjct: 273 AYKAVQ 278
|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 | Back alignment and structure |
|---|
Score = 86.5 bits (214), Expect = 5e-18
Identities = 41/258 (15%), Positives = 77/258 (29%), Gaps = 71/258 (27%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
++ I +IDTG+ + V +
Sbjct: 146 ANTKIAIIDTGVMKNHDDLKNN---FSTDSKNLVPLNGFRGT----------------EP 186
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
+ D GHGT + + N G G +P ++ Y+
Sbjct: 187 EETGDVHDVNDRKGHGTMVSGQTSAN-----------GKLI-GVAPNNKFTMYRVFGSKK 234
Query: 269 CSGAAILQAIDDAIHDGVDIISISIG------LSNSEADYMNDPIAIGALH-----AQQR 317
+ +AI A +DG +I+IS+G ++ + ++ + AL A+++
Sbjct: 235 TELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKK 294
Query: 318 GVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLS 377
+V+ +AGNDG D + + + L G
Sbjct: 295 KSIVVAAAGNDGI--------------------DVNDKQKLKLQREYQGNGEVKD----- 329
Query: 378 RSKTYPLAYGKAIAVNST 395
P + + V ST
Sbjct: 330 ----VPASMDNVVTVGST 343
|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 4e-17
Identities = 30/135 (22%), Positives = 45/135 (33%), Gaps = 28/135 (20%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPA--------TYA 539
++ FS+ G D+AAPG + D+ K Y
Sbjct: 349 LSEFSNFGMNYT-------DIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNGRYI 401
Query: 540 LRSGTSMACPHVTGAAAFIKS-VRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANP 598
++GT++A P V+GA A I + L T N +
Sbjct: 402 YQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHG-------TSKNNKPFS---- 450
Query: 599 HEMGAGEINPLKALN 613
G GE++ KALN
Sbjct: 451 -RYGHGELDVYKALN 464
|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 | Back alignment and structure |
|---|
Score = 87.4 bits (216), Expect = 6e-18
Identities = 45/341 (13%), Positives = 96/341 (28%), Gaps = 77/341 (22%)
Query: 23 ASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHH 82
+ +P Y+V + + + + L + + ++H
Sbjct: 67 CAKDPWRLPGTYVVVL----------KEETHLS-QSERTARRLQAQA-ARRGYLTKILHV 114
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNH 142
+ GF ++ HV + D + + W+ P + +
Sbjct: 115 FHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQSI-PWNL--ERITPPRYRADEY 171
Query: 143 KYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGAR 202
+ S + + ++DT I + R ++
Sbjct: 172 QPPDGGSLVEVYLLDTSIQSDHREIE--------------------------GRVMVTDF 205
Query: 203 HCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK 262
+ HGTH A +G G+A G + S +
Sbjct: 206 ENVPEEDGTRFHRQASKCDSHGTHLAGVVSGR------DAGVAKGA--------SMRSLR 251
Query: 263 AC-KEGGCSGAAILQAIDDAIHDGVD------IISISIGLSNSEADYMNDPIAIGALHAQ 315
+G + + L ++ + ++ + + S +N A
Sbjct: 252 VLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYSRV--LNA--ACQR--LA 305
Query: 316 QRGVVVICSAGNDGP-----YPFTVANTAPWLFTVAASTID 351
+ GVV++ +AGN P A+ AP + TV A+
Sbjct: 306 RAGVVLVTAAGNFRDDACLYSP---AS-APEVITVGATNAQ 342
|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 | Back alignment and structure |
|---|
Score = 63.5 bits (154), Expect = 1e-10
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 22/115 (19%)
Query: 483 RPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRS 542
+P + ++ G + D+ APG ++ A + +S
Sbjct: 344 QPVTLGTLGTNFGRCV--------DLFAPGEDIIGA------SSDC------STCFVSQS 383
Query: 543 GTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT--VYDNTGTPLTNSSGNN 595
GTS A HV G AA + S + T + ++ L+ + V + P
Sbjct: 384 GTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTP 438
|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 | Back alignment and structure |
|---|
Score = 84.4 bits (209), Expect = 1e-17
Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 33/126 (26%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
S G D+AAPG + P SGTS A
Sbjct: 236 GITGSRFGNN-------WVDIAAPGQNITFLR------PDA--------KTGTGSGTSEA 274
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
V+G A + S + T + +K L+ +A Y + +T +N
Sbjct: 275 TAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLVDKVT------------EGRVLN 322
Query: 608 PLKALN 613
KA++
Sbjct: 323 AEKAIS 328
|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 6e-14
Identities = 38/235 (16%), Positives = 67/235 (28%), Gaps = 64/235 (27%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+ +V+ V+D+G+ +F S A+
Sbjct: 44 TPVVVSVVDSGV-----AFI------------------GGLSDS------EFAKFSFTQD 74
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
+ S HGT AS A G G P + I+S + +G
Sbjct: 75 GSPFPVKKSEALYIHGTAMASLIASR-----------YGIY-GVYPHALISSRRVIPDGV 122
Query: 269 CSG----AAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICS 324
+ + II+IS G + + + + +++ +
Sbjct: 123 QDSWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRM--GRNNDRLIVAA 180
Query: 325 AGNDGP-----------YP------FTVANTAPWLFTVAASTIDRDFQSTVLLGN 362
GNDG +P +V + VAA R ++ VL G
Sbjct: 181 VGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGG 235
|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-16
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 38/130 (29%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
++ F++ + D+ APGV + + YA SGT+MA
Sbjct: 215 LSDFTNTNEEI--------DIVAPGVGIKSTY------LDS--------GYAELSGTAMA 252
Query: 548 CPHVTGAAAFIKSV-----RRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMG 602
PHV GA A I ++ +R + + I + L+ A TP+ ++ N G
Sbjct: 253 APHVAGALALIINLAEDAFKRSLSETEIYAQLVRRA-------TPIGFTAQAEGN----G 301
Query: 603 AGEINPLKAL 612
++ ++ +
Sbjct: 302 FLTLDLVERI 311
|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 44/215 (20%), Positives = 78/215 (36%), Gaps = 55/215 (25%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+ +IGVIDTG + P ++ GV + +
Sbjct: 41 AGQIIGVIDTGCQVDHPDLAERI-------IGGV-----NL-----------------TT 71
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ + D GHGTH A T A + + G +P + + KA +G
Sbjct: 72 DYGGDETNFSDNNGHGTHVAGTVAAAETGSGVV---------GVAPKADLFIIKALSGDG 122
Query: 268 GCSGAAILQAIDDAI------HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVV 321
I +AI A+ + + II++S+G ++++ ++D + +A V V
Sbjct: 123 SGEMGWIAKAIRYAVDWRGPKGEQMRIITMSLG-GPTDSEELHDAVK----YAVSNNVSV 177
Query: 322 ICSAGNDGPYPFTVANT-----APWLFTVAASTID 351
+C+AGN+G + V A D
Sbjct: 178 VCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD 212
|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 44/245 (17%), Positives = 78/245 (31%), Gaps = 42/245 (17%)
Query: 125 WDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGIWPESPSFNDQ---GMGEIPSRWKG 181
W + A W ++V+ V+DTGI N G I +
Sbjct: 11 WHYFDRYGVKADKVW---DMGFTGQNVVVAVVDTGILH-HRDLNANVLPGYDFISNSQIS 66
Query: 182 VCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIY 241
+ + D D D HG+H A T A +N I
Sbjct: 67 LDGDGRDADPFDEG----DWFDNWACGGRPDPRKERSDSSWHGSHVAGTIAAV-TNNRI- 120
Query: 242 FGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAI----------HDGVDIISI 291
G+A G + +++ +A G + I + A + +I++
Sbjct: 121 -GVA-----GVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRNPAKVINM 174
Query: 292 SIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGP-----YPFTVANTAPWLFTVA 346
S+G + I A + G +V+ +AGN+ +P + + +V
Sbjct: 175 SLGSDGQCSYNAQT--MIDR--ATRLGALVVVAAGNENQNASNTWP---TS-CNNVLSVG 226
Query: 347 ASTID 351
A+T
Sbjct: 227 ATTSR 231
|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 6e-15
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
A FS+ G + D+AAPG +L+ + G A Y+ +GTSMA
Sbjct: 235 ASFSNYGVDV--------DLAAPGQDILSTV------DSGTRRPVSDA-YSFMAGTSMAT 279
Query: 549 PHVTGAAAFIKS----VRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAG 604
PHV+G AA + S V + T + +K L++T +P +G+G
Sbjct: 280 PHVSGVAALVISAANSVNKNLTPAELKDVLVSTT-------SPFNGRLDR-----ALGSG 327
Query: 605 EINPLKALN 613
++ A+N
Sbjct: 328 IVDAEAAVN 336
|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 5e-16
Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 34/132 (25%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+A FS+R P +V+APGV +L+ P +Y GT+MA
Sbjct: 213 IASFSNRQP----------EVSAPGVDILSTY------PDD--------SYETLMGTAMA 248
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYD------NTGTPLTNSSGNNANPHEM 601
PHV+G A I++ + ++ + T L + + +
Sbjct: 249 TPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTGWDA----DY 304
Query: 602 GAGEINPLKALN 613
G G + A+
Sbjct: 305 GYGVVRAALAVQ 316
|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 6e-15
Identities = 48/230 (20%), Positives = 75/230 (32%), Gaps = 71/230 (30%)
Query: 147 AASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSR 206
+ S I + V+DTG+ + P V
Sbjct: 27 SVSVIQVAVLDTGVDYDHPDLAANI-------AWCVSTLRGKV----------------- 62
Query: 207 ASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-K 265
D GHGTH T A ++N I G G +P +I S +
Sbjct: 63 ----STKLRDCADQNGHGTHVIGTIAA--LNNDI------GVV-GVAPGVQIYSVRVLDA 109
Query: 266 EGGCSGAAILQAIDDAIHD--------------------GVDIISISIGLSNSEADYMND 305
G S + I I+ AI ++IS+S+G ++ Y+ D
Sbjct: 110 RGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLG-GPADDSYLYD 168
Query: 306 PIAIGALHAQQRGVVVICSAGNDGP----YPFTVANTAPWLFTVAASTID 351
I A G+V++ ++GN+G YP A P + V A +
Sbjct: 169 MII----QAYNAGIVIVAASGNEGAPSPSYP---AA-YPEVIAVGAIDSN 210
|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 3e-14
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 28/116 (24%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
+ FS+ G + D+ APG + +A G Y SGTSMA
Sbjct: 186 SSFSNWGSCV--------DLFAPGSQIKSA------WYDG--------GYKTISGTSMAT 223
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT---VYDNTGTP---LTNSSGNNANP 598
PHV G AA T + L + A+ V D GT L + + + P
Sbjct: 224 PHVAGVAALYLQENNGLTPLQLTGLLNSRASENKVSDTRGTTNKLLYSLADSGCEP 279
|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-10
Identities = 44/229 (19%), Positives = 71/229 (31%), Gaps = 73/229 (31%)
Query: 136 KNTWFNHKYH--KAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSH 193
+N + Y+ + VIDTG+ F
Sbjct: 14 RNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFG------------------------- 48
Query: 194 CNRKLIGARHCSRASTNKD---NSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTAR 250
R+ + D N S D GHGTH A T G+ +G+A
Sbjct: 49 -----------GRSVSGYDFVDNDADSSDCNGHGTHVAGTIGGS------QYGVAKNV-- 89
Query: 251 GGSPFSRIASYKAC-KEGGCSGAAILQAIDDAI--HDGVDIISISIGLSNSEADYMNDPI 307
I + G + + ++ +D G + ++S+G S A ++ +
Sbjct: 90 ------NIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQSTA--LDSAV 141
Query: 308 AIGALHAQQRGVVVICSAGNDGP-----YPFTVANTAPWLFTVAASTID 351
A Q GV + +AGN P A P TV ++T
Sbjct: 142 Q----GAIQSGVSFMLAAGNSNADACNTSP---AR-VPSGVTVGSTTSS 182
|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 7e-12
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 20/91 (21%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
+ FS+ G L D+ APG ++ ++ + SGTSMA
Sbjct: 188 SSFSNYGTCL--------DIYAPGSSITSS-WYTSNS-----------ATNTISGTSMAS 227
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
PHV G AA + + + + L T AT
Sbjct: 228 PHVAGVAALYLDENPNLSPAQVTNLLKTRAT 258
|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 43/218 (19%), Positives = 69/218 (31%), Gaps = 69/218 (31%)
Query: 144 YHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARH 203
S + VIDTG+ F
Sbjct: 26 TDYDGSGVTAFVIDTGVLNTHNEFG----------------------------------- 50
Query: 204 CSRASTNKD---NSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIAS 260
RAS+ D N + D GHGTH A T G+ +G+A +
Sbjct: 51 -GRASSGYDFIDNDYDATDCNGHGTHVAGTIGGS------TYGVAKNV--------NVVG 95
Query: 261 YKAC-KEGGCSGAAILQAIDDAI--HDGVDIISISIGLSNSEADYMNDPIAIGALHAQQR 317
+ G S + ++ I+ G + ++S+G S+A +D + A
Sbjct: 96 VRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGASQA--TDDAVN----AAVAA 149
Query: 318 GVVVICSAGNDGPYPFTVANT----APWLFTVAASTID 351
G+ + +AGND N A TV ++T +
Sbjct: 150 GITFVVAAGNDNS---NACNYSPARAADAITVGSTTSN 184
|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 8e-12
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 20/91 (21%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
A FS+ G + D+ APG ++ +A +GTSMA
Sbjct: 186 ASFSNYGSCV--------DLFAPGASIPSAW------YTS------DTATQTLNGTSMAT 225
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
PHV G AA T + + SA++ AT
Sbjct: 226 PHVAGVAALYLEQNPSATPASVASAILNGAT 256
|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 42/216 (19%), Positives = 68/216 (31%), Gaps = 67/216 (31%)
Query: 144 YHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARH 203
Y + + VIDTGI F
Sbjct: 26 YTATGRGVNVYVIDTGIRTTHREFGG---------------------------------- 51
Query: 204 CSRASTNKD-NSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYK 262
RA D G+ +D GHGTH A T G +G+A + + +
Sbjct: 52 --RARVGYDALGGNGQDCNGHGTHVAGTIGGV------TYGVAKAV--------NLYAVR 95
Query: 263 AC-KEGGCSGAAILQAIDDAIHDGVD--IISISIGLSNSEADYMNDPIAIGALHAQQRGV 319
G S + ++ +D + + ++S+G S A +++ + ++ GV
Sbjct: 96 VLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGVSTA--LDNAVK----NSIAAGV 149
Query: 320 VVICSAGNDGPYPFTVANT----APWLFTVAASTID 351
V +AGND N TV A+T
Sbjct: 150 VYAVAAGNDNA---NACNYSPARVAEALTVGATTSS 182
|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 7e-11
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 22/115 (19%)
Query: 483 RPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRS 542
+P + ++ G + D+ APG ++ A + +S
Sbjct: 192 QPVTLGTLGTNFGRCV--------DLFAPGEDIIGA------SSDC------STCFVSQS 231
Query: 543 GTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTAT--VYDNTGTPLTNSSGNN 595
GTS A HV G AA + S + T + ++ L+ + V + P
Sbjct: 232 GTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTP 286
|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 8e-10
Identities = 35/220 (15%), Positives = 63/220 (28%), Gaps = 62/220 (28%)
Query: 144 YHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARH 203
S + + ++DT I + R ++
Sbjct: 21 PPDGGSLVEVYLLDTSIQSDHREIE--------------------------GRVMVTDFE 54
Query: 204 CSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKA 263
+ HGTH A +G G+A G + S +
Sbjct: 55 NVPEEDGTRFHRQASKCDSHGTHLAGVVSGR------DAGVAKGA--------SMRSLRV 100
Query: 264 C-KEGGCSGAAILQAIDDAIHD------GVDIISISIGLSNSEADYMNDPIAIGALHAQQ 316
+G + + L ++ G ++ + + S +N A L
Sbjct: 101 LNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYSRV--LNA--ACQRLARA- 155
Query: 317 RGVVVICSAGNDGP-----YPFTVANTAPWLFTVAASTID 351
GVV++ +AGN P A+ AP + TV A+
Sbjct: 156 -GVVLVTAAGNFRDDACLYSP---AS-APEVITVGATNAQ 190
|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 3e-10
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 23/91 (25%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
+ FS+ G L D+ PG +L+ GG + SGTSMA
Sbjct: 190 SSFSNYGSVL--------DIFGPGTDILST------WIGG--------STRSISGTSMAT 227
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
PHV G AA++ ++ + T + + TA
Sbjct: 228 PHVAGLAAYLMTLGKT-TAASACRYIADTAN 257
|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 1e-09
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 35/158 (22%)
Query: 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC- 264
RA K SSRD GHGTH A T +G+A T ++ K
Sbjct: 52 RAQMVKTYYYSSRDGNGHGTHCAGTVGSR------TYGVAKKT--------QLFGVKVLD 97
Query: 265 KEGGCSGAAILQAIDDAIHDGVD-------IISISIGLSNSEADYMNDPIAIGALHAQQR 317
G + I+ +D D + + S+S+G S + +N A Q
Sbjct: 98 DNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSS--VNS--AAAR--LQSS 151
Query: 318 GVVVICSAGNDGPYPFTVANT----APWLFTVAASTID 351
GV+V +AGN+ N P + TV AS
Sbjct: 152 GVMVAVAAGNNNA---DARNYSPASEPSVCTVGASDRY 186
|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 4e-10
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 23/91 (25%)
Query: 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMAC 548
+ FS+ G + D+ APG ++ + GG SGTSMA
Sbjct: 191 STFSNYGRVV--------DIFAPGTSITST------WIGG--------RTNTISGTSMAT 228
Query: 549 PHVTGAAAFIKSVRRKWTYSMIKSALMTTAT 579
PH+ G AA++ + + + + T +T
Sbjct: 229 PHIAGLAAYLFGLEGG-SAGAMCGRIQTLST 258
|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 7e-10
Identities = 43/158 (27%), Positives = 59/158 (37%), Gaps = 35/158 (22%)
Query: 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC- 264
RA K + ++RD GHGTH A T +G+A I K
Sbjct: 53 RAKQIKSYASTARDGHGHGTHCAGTIGSK------TWGVAKKV--------SIFGVKVLD 98
Query: 265 KEGGCSGAAILQAIDDAIHDGVD-------IISISIGLSNSEADYMNDPIAIGALHAQQR 317
G S + I+ +D D + S+S+G S A +N A Q
Sbjct: 99 DSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGGYSAA--LNQ--AAAR--LQSS 152
Query: 318 GVVVICSAGNDGPYPFTVANT----APWLFTVAASTID 351
GV V +AGND ANT P + TV A+ +
Sbjct: 153 GVFVAVAAGNDNR---DAANTSPASEPTVCTVGATDSN 187
|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 3e-08
Identities = 12/109 (11%), Positives = 29/109 (26%)
Query: 513 VAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKS 572
+ + + +GTS + P G A + T+ ++
Sbjct: 229 TLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQH 288
Query: 573 ALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTT 621
++ T+ + H G G ++ + + T
Sbjct: 289 LVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTV 337
|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 4e-05
Identities = 30/213 (14%), Positives = 62/213 (29%), Gaps = 48/213 (22%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
IV+ ++D GI P S D +
Sbjct: 38 HGIVVSILDDGIEKNHPDLAGNYDPGA----------SFDV---------------NDQD 72
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
+ + + HGT A A +N + G G + +RI +
Sbjct: 73 PDPQPRYTQMNDNRHGTRCAGEVAAV-ANNGV-----CGV--GVAYNARIGGVRML---D 121
Query: 269 CSGAAILQAIDDAIH-DGVDIISISIG------LSNSEADYMNDPIAIGALHAQQ-RGVV 320
++A ++ + + I S S G + A + G + G +
Sbjct: 122 GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSI 181
Query: 321 VICSAGNDG----PYPFTVANTAPWLFTVAAST 349
+ ++GN G + + +++++T
Sbjct: 182 FVWASGNGGREHDSCNCDGYTNSIYTLSISSAT 214
|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 3e-07
Identities = 21/178 (11%), Positives = 43/178 (24%), Gaps = 20/178 (11%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
+S + I D G GTS A
Sbjct: 232 HPPYSEGCSAV--------MAVTYSSGSGEYIHS-SDINGR--------CSNSHGGTSAA 274
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPL--TNSSGNNANPHEMGAGE 605
P G + T+ ++ + +A + ++ G + H G G+
Sbjct: 275 APLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYS-HRYGFGK 333
Query: 606 INPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISNINY 663
I+ K + ++ +L S+ + + +N
Sbjct: 334 IDAHKLIEMSKTWENVNAQTWFYLPTLYVSQSTNSTEETLESVITISEKSLQDANFKR 391
|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 1e-06
Identities = 32/216 (14%), Positives = 60/216 (27%), Gaps = 49/216 (22%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+ +V ++D G+ E+ D E S DF +
Sbjct: 54 AGVVAAIVDDGLDYENEDLKDNFCAEG----------SWDF------------------N 85
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
N + HGT A A G ++I+ + G
Sbjct: 86 DNTNLPKPRLSDDYHGTRCAGEIAA--KKG------NNFCGVGVGYNAKISGIRIL-SGD 136
Query: 269 CSGAAILQAIDDAIHDGVDIISISIG------LSNSEADYMNDPIAIGALHAQQ-RGVVV 321
+ ++ + D DI S S G +D + + G + +G +
Sbjct: 137 ITTEDEAASLIYGL-DVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIY 195
Query: 322 ICSAGNDGPYPFTV----ANTAPWLFTVAASTIDRD 353
+ ++GN G + + T+ A
Sbjct: 196 VFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDL 231
|
| >2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P Length = 114 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 9e-05
Identities = 9/94 (9%), Positives = 24/94 (25%), Gaps = 12/94 (12%)
Query: 23 ASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHH 82
+ +P Y+V + + + + ++ ++H
Sbjct: 29 CAKDPWRLPGTYVVVLKEETHLSQSERTARRLQAQAARR------------GYLTKILHV 76
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPV 116
+ GF ++ HV + D
Sbjct: 77 FHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 110
|
| >2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P Length = 124 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 3e-04
Identities = 9/94 (9%), Positives = 24/94 (25%), Gaps = 12/94 (12%)
Query: 23 ASTSSNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHH 82
+ +P Y+V + + + + ++ ++H
Sbjct: 39 CAKDPWRLPGTYVVVLKEETHLSQSERTARRLQAQAARR------------GYLTKILHV 86
Query: 83 YKHAFKGFSAILTDSEASALSGHDHVVSVFPDPV 116
+ GF ++ HV + D
Sbjct: 87 FHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 120
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 6e-04
Identities = 48/309 (15%), Positives = 91/309 (29%), Gaps = 86/309 (27%)
Query: 55 EIAKLNHMQLLSSIIPSEESERLSLIHHYKH--------AFKGFSAILTDSEASALSGHD 106
E+ N +L SII + L+ ++KH + +L +E
Sbjct: 321 EVLTTNPRRL--SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE---YRKMF 375
Query: 107 HVVSVFPD----P--VLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKAASDIVIGVIDTGI 160
+SVFP P +L L WF+ +V + +
Sbjct: 376 DRLSVFPPSAHIPTILLSL------------------IWFDVIKSD-VMVVVNKLHKYSL 416
Query: 161 ---WPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217
P+ + IPS + + ++ + H R ++ + + + D
Sbjct: 417 VEKQPKESTI------SIPSIYLELKVKLENEYALH--RSIVDHYNIPKTFDSDDLIPPY 468
Query: 218 RDP-----LGHGTHTASTAAGNYVS--NAIYFGL--------AGGTARGGSP-----FSR 257
D +GH H + ++ ++ TA S +
Sbjct: 469 LDQYFYSHIGH--HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526
Query: 258 IASYKA--CKEGGCSGAAILQAIDDAIHD-GVDIIS------ISIGLSNSEADYMNDPIA 308
+ YK C ++ AI D + ++I + I L ++ I
Sbjct: 527 LKFYKPYICDNDP-KYERLVNAILDFLPKIEENLICSKYTDLLRIALMAE-----DEAIF 580
Query: 309 IGALHAQQR 317
A QR
Sbjct: 581 EEAHKQVQR 589
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 760 | |||
| 3i6s_A | 649 | Subtilisin-like protease; PA-domain, FN3-domain, h | 100.0 | |
| 3vta_A | 621 | Cucumisin; subtilisin-like fold, serine protease, | 100.0 | |
| 1xf1_A | 926 | C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St | 100.0 | |
| 3afg_A | 539 | Subtilisin-like serine protease; propeptide, therm | 100.0 | |
| 2z2z_A | 395 | TK-subtilisin precursor; thermococcus kodakaraensi | 100.0 | |
| 2p4e_P | 692 | Proprotein convertase subtilisin/kexin type 9; pro | 100.0 | |
| 3t41_A | 471 | Epidermin leader peptide processing serine protea; | 100.0 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 100.0 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 100.0 | |
| 1dbi_A | 280 | AK.1 serine protease; hydrolase; 1.80A {Bacillus S | 100.0 | |
| 1r0r_E | 274 | Subtilisin carlsberg; high resolution, serine prot | 100.0 | |
| 1gci_A | 269 | Subtilisin; hydrolase, serine protease; 0.78A {Bac | 100.0 | |
| 1to2_E | 281 | Subtilisin BPN'; serine protease, hydrolase; HET: | 100.0 | |
| 4h6x_A | 357 | Thiazoline oxidase/subtilisin-like protease; hydro | 100.0 | |
| 2x8j_A | 327 | Intracellular subtilisin protease; hydrolase, seri | 100.0 | |
| 1thm_A | 279 | Thermitase; hydrolase(serine protease); 1.37A {The | 100.0 | |
| 3zxy_A | 282 | Subtilisin-like protein; hydrolase; 1.58A {Prochlo | 100.0 | |
| 2z30_A | 320 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 100.0 | |
| 2ixt_A | 310 | 36KDA protease; serine protease, sphericase, subti | 100.0 | |
| 4h6w_A | 306 | N-terminal cyanobactin protease; hydrolase; 2.45A | 100.0 | |
| 2iy9_A | 347 | SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col | 100.0 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 100.0 | |
| 1wmd_A | 434 | Protease; alpha-beta hydrolase fold, jelly-roll be | 100.0 | |
| 1sh7_A | 284 | Extracellular subtilisin-like serine proteinase; c | 100.0 | |
| 3lpc_A | 340 | APRB2; protease, subtilase, virulence factor, hydr | 100.0 | |
| 2oxa_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 100.0 | |
| 2b6n_A | 278 | Proteinase K; S binding, substrate specificity, pr | 100.0 | |
| 4dzt_A | 276 | Aqualysin-1, aqualysin-I; serine protease, calcium | 100.0 | |
| 2pwa_A | 279 | Proteinase K; structure, alanine boronic acid, hyd | 100.0 | |
| 1p8j_A | 471 | Furin precursor; prohormone convertase, SPC1, PACE | 100.0 | |
| 2id4_A | 503 | Kexin; KEX2, kexin, furin, proprotein, prohormone, | 100.0 | |
| 2qtw_B | 546 | Proprotein convertase subtilisin/kexin type 9; cor | 100.0 | |
| 3f7m_A | 279 | Alkaline serine protease VER112; verticillium psal | 100.0 | |
| 3hjr_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 100.0 | |
| 1t1e_A | 552 | Kumamolisin; proenzyme, prosubtilase, activation m | 99.91 | |
| 1ga6_A | 372 | Serine-carboxyl proteinase; serine-carboxyl protei | 99.85 | |
| 3edy_A | 544 | Tripeptidyl-peptidase 1; protease, TPP1, sedolisin | 99.02 | |
| 2w2n_P | 114 | Proprotein convertase subtilisin/kexin type 9; hyd | 98.96 | |
| 3cnq_P | 80 | Subtilisin BPN'; uncleaved, proenzyme, substrate c | 98.82 | |
| 2qtw_A | 124 | Proprotein convertase subtilisin/kexin type 9 Pro; | 98.65 | |
| 1v5i_B | 76 | POIA1, IA-1=serine proteinase inhibitor; protease- | 98.57 | |
| 2z30_B | 65 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 97.37 | |
| 3icu_A | 194 | E3 ubiquitin-protein ligase RNF128; E3 ligase, ene | 96.25 | |
| 2ys4_A | 122 | Hydrocephalus-inducing protein homolog; hydin, PAP | 95.84 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 87.66 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 82.94 | |
| 2e6j_A | 112 | Hydin protein; PAPD, structural genomics, NPPSFA, | 82.79 | |
| 3qbt_B | 140 | Inositol polyphosphate 5-phosphatase OCRL-1; prote | 82.32 |
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-116 Score=1015.90 Aligned_cols=613 Identities=37% Similarity=0.578 Sum_probs=545.3
Q ss_pred cCCCccccccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccce
Q 036830 121 TTRSWDFLAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKL 198 (760)
Q Consensus 121 ~~~s~~~~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki 198 (760)
++++|+|+|+.. ...+|+.+ |+||+|||||||||++||+|.+.+++++|.+|+|.|+.+.+|+...||+|+
T Consensus 1 Tt~s~~flgl~~-------~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~ki 73 (649)
T 3i6s_A 1 TTHTSDFLKLNP-------SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKL 73 (649)
T ss_dssp CCSHHHHTTCCS-------SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred CCCChHHcCCCC-------chhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccce
Confidence 468999999974 35799987 999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCC-----CCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHH
Q 036830 199 IGARHCSRAST-----NKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAA 273 (760)
Q Consensus 199 ~g~~~~~~~~~-----~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~ 273 (760)
+++++|.+++. ...+..+++|.+||||||||||||+.+++.+++|++.|.++||||+|+|++||+++..++..++
T Consensus 74 ig~~~f~~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~ 153 (649)
T 3i6s_A 74 IGANYFNKGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSD 153 (649)
T ss_dssp EEEEECCHHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHH
T ss_pred eeeEeccCcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHH
Confidence 99999985532 1124467889999999999999999999989999999999999999999999999988899999
Q ss_pred HHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEecccccccc
Q 036830 274 ILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRD 353 (760)
Q Consensus 274 i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~ 353 (760)
+++||+||+++|+||||||||.. ...+..+++..++++|.++|++||+||||+|+...++++.+||+|+|||++.+|.
T Consensus 154 i~~Ai~~A~~~gvdVIn~SlG~~--~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~ 231 (649)
T 3i6s_A 154 LIAAMDQAVADGVDMISISYGYR--FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRT 231 (649)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCC--SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCE
T ss_pred HHHHHHHHHHcCCCEEEeCCccC--CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccc
Confidence 99999999999999999999987 4567889999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccc--cch-------------hh
Q 036830 354 FQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDT--RGR-------------KI 418 (760)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~Gk-------------k~ 418 (760)
|...+.+++++++.|.+++..... ...+|++|.. ....|.+..++..++ +|| |.
T Consensus 232 f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~ 300 (649)
T 3i6s_A 232 FAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK----------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMR 300 (649)
T ss_dssp EEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHH
T ss_pred eeeEEEeCCCcEEeeeecccCccc-CcceeeEecc----------cccccccccccccccccCCcEEEEeCCCccHHHHH
Confidence 999999999999999998775543 5679999875 346799888877777 887 78
Q ss_pred hhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCC
Q 036830 419 AVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGL 498 (760)
Q Consensus 419 ~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 498 (760)
.+++++|+.++|++|+......+. +.+|+.+++..+++.|+.|++++.+++++|.+..+..+..+.+.++.||||||+.
T Consensus 301 ~~~~~~Ga~g~i~~n~~~~~~~~~-~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~ 379 (649)
T 3i6s_A 301 IITRARLKAAIFISEDPGVFRSAT-FPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSR 379 (649)
T ss_dssp HHHHHTCSEEEEECCCGGGGGCCC-CCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCT
T ss_pred HHHHhcCceEEEEecCcccccccc-CcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCC
Confidence 999999999999999873222444 8999999999999999999999999999999999998888899999999999999
Q ss_pred CCCCcccCceeeCCceEEeeecCCCCCCCCCCCCC-CCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 036830 499 PTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGE-KPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTT 577 (760)
Q Consensus 499 ~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~T 577 (760)
..++++||||+|||++|+++|+....+.... .+. +...|..+||||||||||||+||||||+||+|+|++||++||+|
T Consensus 380 ~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~-~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtT 458 (649)
T 3i6s_A 380 SYLGISKPDILAPGVLILAAYPPNVFATSIG-TNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTT 458 (649)
T ss_dssp TCTTSCSCCEEEECSSEEEECCTTSCCEEET-TTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred CCCCccCCeEEeCCCCeEeecCCCCCccccc-cccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 7789999999999999999998754321100 111 23689999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcCCC-CCCCCCCCCCCCcccCccccCCCceeeecChhhHHhhhhhcCCCccceecccccccc--CCCCCC
Q 036830 578 ATVYDNTGTPLTNS-SGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFN--CPKKSS 654 (760)
Q Consensus 578 A~~~~~~g~p~~~~-~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--c~~~~~ 654 (760)
|+++++.+.|+.+. .+.++.+++||+|+||+.+|++|+||||.+.+||++|||++||+.++|+.|++.+++ |+.
T Consensus 459 A~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~--- 535 (649)
T 3i6s_A 459 ADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN--- 535 (649)
T ss_dssp CBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC---
T ss_pred cccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC---
Confidence 99999999999886 466788999999999999999999999999999999999999999999999999888 974
Q ss_pred cccccCcCCCcEEEee-cccCcee--EEEEEEEEecCCCCeEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEEe
Q 036830 655 AKLISNINYPSISISK-LARQGAI--RTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGK 731 (760)
Q Consensus 655 ~~~~~~ln~ps~~~~~-~~~~~~~--~t~~rtv~N~~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 731 (760)
.+.+||||||++.. +.+.... +||+|||||||+...+|+++++.|.|++|+|+|++|+|.+.+|+++|+|||+..
T Consensus 536 --~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~ 613 (649)
T 3i6s_A 536 --PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYI 613 (649)
T ss_dssp --CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEEC
T ss_pred --chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEec
Confidence 46799999999987 5551111 899999999999999999999999999999999999998899999999999984
Q ss_pred -cCCCCceEEEEEEEC--CceEEEEEEEEEEC
Q 036830 732 -EASSGYNYGSITWSD--DRHSVRMMFAVDVE 760 (760)
Q Consensus 732 -~~~~~~~~G~~~~~~--~~~~v~~P~~~~~~ 760 (760)
...+.|.||+|+|++ +.|.||+||+|++.
T Consensus 614 ~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 614 GDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred ccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 446679999999999 89999999999864
|
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-108 Score=957.55 Aligned_cols=606 Identities=41% Similarity=0.669 Sum_probs=510.9
Q ss_pred cCCCccccccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccce
Q 036830 121 TTRSWDFLAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKL 198 (760)
Q Consensus 121 ~~~s~~~~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki 198 (760)
++++|+|+|++. .+|... |+||+|||||||||++||+|.++++++++.+|+|.|+.+.+|. ||+|+
T Consensus 1 tt~s~~flGl~~---------~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ 68 (621)
T 3vta_A 1 TTRSWDFLGFPL---------TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKI 68 (621)
T ss_dssp CCSHHHHTTCCT---------TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSE
T ss_pred CCCChhHcCCCc---------cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcce
Confidence 478999999974 456665 9999999999999999999999999999999999999998885 99999
Q ss_pred ecccccCCCCCCC-CCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHH
Q 036830 199 IGARHCSRASTNK-DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQA 277 (760)
Q Consensus 199 ~g~~~~~~~~~~~-~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~a 277 (760)
+++++|..+.... .+..+++|++||||||||||||+..++.+..|++.+.++||||+|+|++||+|++.+|..+++++|
T Consensus 69 ig~~~~~~~~~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a 148 (621)
T 3vta_A 69 IGARSYHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAA 148 (621)
T ss_dssp EEEEECCCSSSCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHH
T ss_pred eeeeecccCCccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHH
Confidence 9999998775443 455778899999999999999999888888888889999999999999999999988999999999
Q ss_pred HHHHHhCCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceee
Q 036830 278 IDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQST 357 (760)
Q Consensus 278 i~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~ 357 (760)
|++|+++|+||||||||+.. +..+..+++++++++|.++|++||+||||+|+...++++.+||+++|++++.++.+...
T Consensus 149 ~~~a~~~g~dVin~SlG~~~-~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~ 227 (621)
T 3vta_A 149 YDDAIADGVDIISLSVGGAN-PRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQ 227 (621)
T ss_dssp HHHHHHHTCSEEEECCCCCC-GGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEE
T ss_pred HHHHHHhCCCEEEecCCCCC-CCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceee
Confidence 99999999999999999875 45567788999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccch----------hhhhhhhcCce
Q 036830 358 VLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR----------KIAVAENVEAQ 427 (760)
Q Consensus 358 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gk----------k~~~~~~~Ga~ 427 (760)
+.++++..+.+.++... ....+++++..+.............|.+..++..+++|| +..+....|+.
T Consensus 228 ~~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~ 304 (621)
T 3vta_A 228 VQIGNGQSFQGVSINTF---DNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAA 304 (621)
T ss_dssp EEETTSCEEEEBCCCCS---CCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCS
T ss_pred EEeccCceeeeeecccC---CCcccccccccccccccccccccccccccccccccccceEEEEecCCChhHHhhhhccee
Confidence 99999999988877543 345778888776655555556677899999999999988 56777888999
Q ss_pred EEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCc
Q 036830 428 GLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPD 507 (760)
Q Consensus 428 ~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 507 (760)
+++++++..... +. +.+|...++..++..++.|+.....+...+....+.. +...+.++.||||||+...++++|||
T Consensus 305 gvi~~~~~~~~~-~~-~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FSSrGP~~~~~~ilKPD 381 (621)
T 3vta_A 305 GVLMTSNTRDYA-DS-YPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFSSRGPNRATKDVIKPD 381 (621)
T ss_dssp EEEEECSCCSSC-CC-CSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTSCCCSCTTCTTSCSCC
T ss_pred EEEEEecCCCcc-cc-cccceEEECHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeecCCCCCCCCCCeeccc
Confidence 999998765432 22 7899999999999999999999998888887665554 45678999999999998788999999
Q ss_pred eeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCC
Q 036830 508 VAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTP 587 (760)
Q Consensus 508 I~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p 587 (760)
|+|||++|+|+|+...... ...+...|..+||||||||||||+||||||+||+|+|++||++||+||++++..+
T Consensus 382 I~APG~~Ilsa~~~~~~~~----~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~-- 455 (621)
T 3vta_A 382 ISGPGVEILAAWPSVAPVG----GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF-- 455 (621)
T ss_dssp EEEECSSEEEECCSSSCBT----TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT--
T ss_pred cccCCcceEeecCcccccc----CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC--
Confidence 9999999999998643221 1223478999999999999999999999999999999999999999999876543
Q ss_pred cCCCCCCCCCCCCCCCcccCccccCCCceeeecChhhHHhhhhhcCCCccceeccccccccCCCCCCcccccCcCCCcEE
Q 036830 588 LTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSMTNTTFNCPKKSSAKLISNINYPSIS 667 (760)
Q Consensus 588 ~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~ 667 (760)
.+..+++||+|+||+.+|++|+||||.+..||+.|||++||+.++++.+++.+..|+. .......+||||||+
T Consensus 456 ------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lN~pS~~ 528 (621)
T 3vta_A 456 ------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTS-GNTGRVWDLNYPSFG 528 (621)
T ss_dssp ------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC------------------------------CGGGSCCSSEE
T ss_pred ------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCC-CCcCcccccccccEE
Confidence 4567889999999999999999999999999999999999999999999999999976 345667899999999
Q ss_pred EeecccCceeEEEEEEEEecCCCCeEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEEecCCCCceEEEEEEECC
Q 036830 668 ISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDD 747 (760)
Q Consensus 668 ~~~~~~~~~~~t~~rtv~N~~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~~~ 747 (760)
+........+++|+|||||+|+...+|+++++.|.|++|+|+|++|+|++.+|+++|+|||+. +.++.|+||+|+|+|+
T Consensus 529 v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~-~~~~~~~~g~l~w~d~ 607 (621)
T 3vta_A 529 LSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG-SIKGFVVSASLVWSDG 607 (621)
T ss_dssp EECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE-CCCSSEEEEEEEEECS
T ss_pred EEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe-cCCCceEEEEEEEEcC
Confidence 975544455899999999999999999999999999999999999999988999999999985 4678899999999999
Q ss_pred ceEEEEEEEEEE
Q 036830 748 RHSVRMMFAVDV 759 (760)
Q Consensus 748 ~~~v~~P~~~~~ 759 (760)
.|.||+||+|+.
T Consensus 608 ~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 608 VHYVRSPITITS 619 (621)
T ss_dssp SCCCEEEEEEEC
T ss_pred CEEEEeCEEEEE
Confidence 999999999985
|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-78 Score=731.37 Aligned_cols=524 Identities=22% Similarity=0.268 Sum_probs=410.4
Q ss_pred cccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCC----------CcccCccceecccccC
Q 036830 138 TWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDF----------KKSHCNRKLIGARHCS 205 (760)
Q Consensus 138 ~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f----------~~~~~n~ki~g~~~~~ 205 (760)
+++..+|+.+ |+||+|||||||||++||+|.+ +..|++.|..+..| ....||+|++++++|.
T Consensus 4 i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~ 77 (926)
T 1xf1_A 4 SQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYS 77 (926)
T ss_dssp TCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESC
T ss_pred cccHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccc
Confidence 4467899876 9999999999999999999984 24566655432222 2347999999999997
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC--CCHHHHHHHHHHHHh
Q 036830 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG--CSGAAILQAIDDAIH 283 (760)
Q Consensus 206 ~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~ 283 (760)
++. ...|..||||||||||||+...+.+. ++.+.||||+|+|++||+|++.+ +..+++++||+||++
T Consensus 78 ~~~-------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~ 146 (926)
T 1xf1_A 78 KDG-------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAIN 146 (926)
T ss_dssp CCS-------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHH
T ss_pred cCC-------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHH
Confidence 652 22389999999999999987544321 35678999999999999998776 566789999999999
Q ss_pred CCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-------------CCcc--CCCCceEEeccc
Q 036830 284 DGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP-------------FTVA--NTAPWLFTVAAS 348 (760)
Q Consensus 284 ~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------------~~~~--~~~p~vitVgA~ 348 (760)
+|+||||||||..........+.++.++++|.++|++||+||||+|+.. .++. +.+||+|+|||+
T Consensus 147 ~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~ 226 (926)
T 1xf1_A 147 LGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASY 226 (926)
T ss_dssp TTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEE
T ss_pred hCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEecc
Confidence 9999999999987422345678889999999999999999999999632 2233 347999999999
Q ss_pred cccccceeeEEe-CCCeeEeeeeeecc-cCCCCceeeeEecccccccccccccccccccCCCCCccccch----------
Q 036830 349 TIDRDFQSTVLL-GNGKAIKGTAISLS-NLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGR---------- 416 (760)
Q Consensus 349 ~~~~~~~~~~~~-~~~~~~~g~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gk---------- 416 (760)
+.++.+...+.+ +++....+.++... .+.....||+++.+. .|.+..+ .+++||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gkivl~~rg~~~ 292 (926)
T 1xf1_A 227 SPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGKIALIERGDID 292 (926)
T ss_dssp BCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTSEEEEECCSSC
T ss_pred ccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCeEEEEECCCCC
Confidence 999998888887 56655555555442 223456799988753 2655444 467776
Q ss_pred ---hhhhhhhcCceEEEEEcCCCCCC---CCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceec
Q 036830 417 ---KIAVAENVEAQGLIFINDDEKIW---PTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAY 490 (760)
Q Consensus 417 ---k~~~~~~~Ga~~~i~~~~~~~~~---~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 490 (760)
|..+++.+||+++|++|+..... .....++|+..++..++..|+. ....++++............+.++.
T Consensus 293 ~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~~a~ 368 (926)
T 1xf1_A 293 FKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTKLSR 368 (926)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSBCCT
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcceecc
Confidence 78899999999999999875543 1123789999999999987773 4555566555544455566789999
Q ss_pred ccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHH----HhCCCCC
Q 036830 491 FSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIK----SVRRKWT 566 (760)
Q Consensus 491 fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----q~~P~ls 566 (760)
||||||+. ++++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+|+
T Consensus 369 FSSrGp~~--~~~lKPDI~APG~~I~sa~~~--------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~s 432 (926)
T 1xf1_A 369 FSSWGLTA--DGNIKPDIAAPGQDILSSVAN--------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMT 432 (926)
T ss_dssp TSCCCBCT--TSCBSCCEEEECCCEEESSSC--------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSH
T ss_pred ccCCCCCC--CCccCceEECCCCCEEeeccC--------------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999996 899999999999999999976 689999999999999999999996 4699999
Q ss_pred HHH----HHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCceeeecChhhHHhhhhhcCCCccceecc
Q 036830 567 YSM----IKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYSKKNIRSM 642 (760)
Q Consensus 567 ~~~----ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 642 (760)
|+| ||++||+||++++..+ ....+++++||+|+||+.+|+++.+ |||..+++.
T Consensus 433 p~~~~~~Iks~L~~TA~~~~~~~------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~------ 489 (926)
T 1xf1_A 433 PSERLDLAKKVLMSSATALYDED------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTS------ 489 (926)
T ss_dssp HHHHHHHHHHHHHHHSBCCEEGG------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSC------
T ss_pred HHHHHHHHHHHHHhcCCCcccCC------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCc------
Confidence 997 9999999999775321 1234577899999999999999854 567766432
Q ss_pred ccccccCCCCCCcccccCcCCCcEEEeecccCceeEEEEEEEEecCCCC--eEEEEEEeC--CCCcEEEEecceeEEe--
Q 036830 643 TNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRTVKRTVTNVGSPN--ATYISMVNA--PSGLAVKVFPQKLTFV-- 716 (760)
Q Consensus 643 ~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~t~~rtv~N~~~~~--~~y~~~~~~--~~g~~v~v~p~~~~~~-- 716 (760)
++|.+.++.. .++++|||+|+|+.+ .+|++.+.. |.+..++|+|..|.|.
T Consensus 490 ---------------------~~i~l~~~~~---~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~ 545 (926)
T 1xf1_A 490 ---------------------SKVHLNNVSD---KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSW 545 (926)
T ss_dssp ---------------------SCEEEEEECS---EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCC
T ss_pred ---------------------ceeeccccCc---cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccC
Confidence 2344555555 789999999999854 568877765 6788999988877654
Q ss_pred -----eCceEEEEEEEEEEe---------cCCCCceEEEEEEE--CCce-EEEEEEEEEE
Q 036830 717 -----EGIIKLSFKASFFGK---------EASSGYNYGSITWS--DDRH-SVRMMFAVDV 759 (760)
Q Consensus 717 -----~~~~~~~~~vt~~~~---------~~~~~~~~G~~~~~--~~~~-~v~~P~~~~~ 759 (760)
++||+++|+|||+.. .+++.|+||+|+|+ ++.| .||+||+++.
T Consensus 546 ~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 546 QKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred CeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 359999999999873 13566899999999 5555 5999999864
|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-60 Score=540.90 Aligned_cols=367 Identities=27% Similarity=0.401 Sum_probs=288.3
Q ss_pred CCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHh------
Q 036830 29 EIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASAL------ 102 (760)
Q Consensus 29 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L------ 102 (760)
.++.+|||.|++.... +...++++.+ ..++.++|+ .|+||+++++.+++++|
T Consensus 33 ~~~~~~iV~~~~~~~~--------------~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~ 90 (539)
T 3afg_A 33 DQEVSTIIMFDNQADK--------------EKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDT 90 (539)
T ss_dssp TCEEEEEEEESSHHHH--------------HHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCC
T ss_pred cCceEEEEEECCCCCH--------------HHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccc
Confidence 4456799999975422 2223334333 246889996 59999999999999999
Q ss_pred -----cCCCCeEEEEeCcccccccCCCccccccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCC
Q 036830 103 -----SGHDHVVSVFPDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEI 175 (760)
Q Consensus 103 -----~~~p~V~~V~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~ 175 (760)
+++|+|++|++++.+++.... .++... ...+....+|+.+ |+||+|||||||||++||+|.+
T Consensus 91 ~~~~~~~~~~V~~v~~d~~~~~~~~~----~~~~~~-~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~------ 159 (539)
T 3afg_A 91 GYFGNAQLSGVQFIQEDYVVKVAVET----EGLDES-AAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG------ 159 (539)
T ss_dssp C---CCCCTTEEEEEECCEEECC----------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT------
T ss_pred cccccccCCCeeEEEecccccccCcc----ccCCcc-ccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC------
Confidence 899999999999998875321 111110 0112366889986 9999999999999999999963
Q ss_pred CCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCC
Q 036830 176 PSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPF 255 (760)
Q Consensus 176 ~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~ 255 (760)
++.+.++|.++. ..+.|.+||||||||||||+..+ ..+.+.||||+
T Consensus 160 ---------------------~i~~~~d~~~~~------~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~ 205 (539)
T 3afg_A 160 ---------------------KVIGWVDFVNGK------TTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPG 205 (539)
T ss_dssp ---------------------TEEEEEETTTCC------SSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTT
T ss_pred ---------------------CEeeeEECCCCC------CCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCC
Confidence 345555555431 34678899999999999997643 13446899999
Q ss_pred CeEEEEEeccCCC-CCHHHHHHHHHHHHhC----CCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCC
Q 036830 256 SRIASYKACKEGG-CSGAAILQAIDDAIHD----GVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGP 330 (760)
Q Consensus 256 A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~ 330 (760)
|+|+.+|++++.+ +..+++++||+||+++ |++|||||||... .....+.+..+++++.++|++||+||||+|+
T Consensus 206 A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~--~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~ 283 (539)
T 3afg_A 206 AKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ--SSDGTDSLSQAVNNAWDAGLVVVVAAGNSGP 283 (539)
T ss_dssp CEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS--CCCSCSHHHHHHHHHHHTTCEEEEECCSCCS
T ss_pred CEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC--CCccchHHHHHHHHHHhcCCEEEEECCCCCC
Confidence 9999999999877 7889999999999976 8999999999884 3345688889999999999999999999997
Q ss_pred CCC--CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCC
Q 036830 331 YPF--TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTL 408 (760)
Q Consensus 331 ~~~--~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~ 408 (760)
... ..++..+++|+|||++.+
T Consensus 284 ~~~~~~~Pa~~~~vitVgA~~~~--------------------------------------------------------- 306 (539)
T 3afg_A 284 NKYTVGSPAAASKVITVGAVDKY--------------------------------------------------------- 306 (539)
T ss_dssp SSSCCCTTTTCSSSEEEEEECTT---------------------------------------------------------
T ss_pred CCCcccCCccCCceEEEeeecCC---------------------------------------------------------
Confidence 654 345677999999985421
Q ss_pred CCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCce
Q 036830 409 YPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVV 488 (760)
Q Consensus 409 ~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 488 (760)
+.+
T Consensus 307 -----------------------------------------------------------------------------~~~ 309 (539)
T 3afg_A 307 -----------------------------------------------------------------------------DVI 309 (539)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 457
Q ss_pred ecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHH
Q 036830 489 AYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYS 568 (760)
Q Consensus 489 a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~ 568 (760)
+.||||||+. ++++||||+|||++|++++...... .+.....|..++|||||||||||++|||+|+||+|+++
T Consensus 310 a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~-----~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~ 382 (539)
T 3afg_A 310 TDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM-----GQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPD 382 (539)
T ss_dssp CSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC-----SEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred ccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC-----CCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 8999999997 8999999999999999998653210 01111469999999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCc
Q 036830 569 MIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPG 615 (760)
Q Consensus 569 ~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 615 (760)
+||++|++||++++.. ..+++.||+|+||+.+|++..
T Consensus 383 ~vk~~L~~tA~~~~~~----------~~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 383 KVKTALIETADIVKPD----------EIADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHSBCSSGG----------GCSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHhhCccCCCC----------CCCccCccCCccCHHHHhhhc
Confidence 9999999999976421 135678999999999999853
|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-59 Score=513.07 Aligned_cols=344 Identities=23% Similarity=0.270 Sum_probs=276.8
Q ss_pred CCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHhcCCCCeEE
Q 036830 31 PKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVS 110 (760)
Q Consensus 31 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V~~ 110 (760)
+.+|||+||+.... .+++++. ..++.++|.. +++|+++++++++++|+++|+|++
T Consensus 2 ~~~~iV~~~~~~~~-----------------~~~~~~~-------g~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~ 56 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN-----------------PHEVLGI-------GGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEK 56 (395)
T ss_dssp EEEEEEEECTTTCC-----------------HHHHHHT-------TCEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEE
T ss_pred cEEEEEEECCCccH-----------------HHHHHHc-------CCEEEEEecc-CCEEEEEECHHHHHHHHcCCCceE
Confidence 46899999997533 1233332 3568899975 999999999999999999999999
Q ss_pred EEeCcccccccCCCc-----------cccccccCCCcccccccccccC-CCC--eEEEEEeCCCCCCCCCCCCCCCCCCC
Q 036830 111 VFPDPVLQLHTTRSW-----------DFLAAAAKPAKNTWFNHKYHKA-ASD--IVIGVIDTGIWPESPSFNDQGMGEIP 176 (760)
Q Consensus 111 V~~~~~~~~~~~~s~-----------~~~g~~~~~~~~~~~~~~~~~~-G~G--v~VgVIDtGid~~Hp~f~~~~~~~~~ 176 (760)
|++++.+++.....+ ..|++.. +....+|+.+ |+| |+|||||||||++||+|.+
T Consensus 57 v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~-----i~~~~~w~~~~G~g~~v~VaViDtGid~~Hp~l~~------- 124 (395)
T 2z2z_A 57 VEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIER-----VKAPSVWSITDGSVSVIQVAVLDTGVDYDHPDLAA------- 124 (395)
T ss_dssp EEECCEEEECCEECC------CCSCCCCHHHHH-----TTCGGGGGTCSSCCTTCEEEEEESCBCTTCTTTGG-------
T ss_pred EEEeeeecccCCCCcccccccCccccCCcchhh-----cCHHHHHhhcCCCCCcEEEEEEcCCCCCCChhHhh-------
Confidence 999999876543221 1223322 2366889988 999 9999999999999999974
Q ss_pred CccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCC
Q 036830 177 SRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFS 256 (760)
Q Consensus 177 ~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A 256 (760)
++...++|..+.... +..+..|..||||||||||+|.. + +..+.||||+|
T Consensus 125 --------------------~~~~~~~~~~~~~~~-~~~~~~d~~gHGT~vAgiia~~~-n--------~~g~~GvAp~a 174 (395)
T 2z2z_A 125 --------------------NIAWCVSTLRGKVST-KLRDCADQNGHGTHVIGTIAALN-N--------DIGVVGVAPGV 174 (395)
T ss_dssp --------------------GEEEEEECGGGCCBC-CHHHHBCSSSHHHHHHHHHHCCC-S--------SSSCCCSSTTC
T ss_pred --------------------ccccCccccCCcccC-CCCCCCCCCCCHHHHHHHHHeec-C--------CCceEEECCCC
Confidence 122222222211000 00124678999999999999974 1 22347999999
Q ss_pred eEEEEEeccCCC-CCHHHHHHHHHHHHhC--------------------CCcEEEecccCCCCCCCCCCcHHHHHHHHHH
Q 036830 257 RIASYKACKEGG-CSGAAILQAIDDAIHD--------------------GVDIISISIGLSNSEADYMNDPIAIGALHAQ 315 (760)
Q Consensus 257 ~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--------------------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~ 315 (760)
+|+.+|++++.+ +..+++++||+||+++ +++|||||||... ....+..++.++.
T Consensus 175 ~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~ 249 (395)
T 2z2z_A 175 QIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA-----DDSYLYDMIIQAY 249 (395)
T ss_dssp EEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC-----CCHHHHHHHHHHH
Confidence 999999998877 7889999999999988 9999999999874 2466778888999
Q ss_pred hCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEeccccccccc
Q 036830 316 QRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNST 395 (760)
Q Consensus 316 ~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 395 (760)
++|++||+||||+|.....+++..|++|+|||++.+
T Consensus 250 ~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------------------------- 285 (395)
T 2z2z_A 250 NAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN-------------------------------------------- 285 (395)
T ss_dssp HTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------------------------------------
T ss_pred HCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC--------------------------------------------
Confidence 999999999999998877888889999999986432
Q ss_pred ccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEcc
Q 036830 396 LVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILP 475 (760)
Q Consensus 396 ~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 475 (760)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHH
Q 036830 476 TVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAA 555 (760)
Q Consensus 476 ~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~a 555 (760)
+.++.||++|| +|+|||++|+|+++. +.|..++|||||||||||++
T Consensus 286 ----------~~~a~fS~~G~----------~v~APG~~i~s~~~~--------------~~y~~~sGTS~AaP~VaG~a 331 (395)
T 2z2z_A 286 ----------DNIASFSNRQP----------EVSAPGVDILSTYPD--------------DSYETLMGTAMATPHVSGVV 331 (395)
T ss_dssp ----------SCBCTTSCSSC----------SEEEECSSEEEEETT--------------TEEEEEESHHHHHHHHHHHH
T ss_pred ----------CCCCcccCCCC----------CEEeCCCCeeeecCC--------------CceEecCCHHHHHHHHHHHH
Confidence 55789999998 679999999999986 78999999999999999999
Q ss_pred HHHHHhCC-------------CCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCc
Q 036830 556 AFIKSVRR-------------KWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPG 615 (760)
Q Consensus 556 ALl~q~~P-------------~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 615 (760)
|||+|++| .|++.+||++|++||+++.. +..+..||||+||+.+|++.+
T Consensus 332 All~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~-----------~g~~~~~G~G~vd~~~A~~~a 393 (395)
T 2z2z_A 332 ALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP-----------TGWDADYGYGVVRAALAVQAA 393 (395)
T ss_dssp HHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS-----------SSSBTTTBTCBCCHHHHHHHH
T ss_pred HHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCC-----------CCCCCCccCceeCHHHHHHHH
Confidence 99999999 99999999999999997642 235678999999999998743
|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-58 Score=525.06 Aligned_cols=336 Identities=18% Similarity=0.214 Sum_probs=57.0
Q ss_pred cEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHhcCCCCeEEEE
Q 036830 33 PYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVF 112 (760)
Q Consensus 33 ~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V~~V~ 112 (760)
+|||+||+.... ...+.+.+.+.....+. ....++.+.|++.|+||+++++++++++|+++|+|++|+
T Consensus 77 ~YIV~lk~~~~~-----------~~~~~~~~~l~a~~~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Ve 144 (692)
T 2p4e_P 77 TYVVVLKEETHL-----------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIE 144 (692)
T ss_dssp EEEEEECTTCCH-----------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEE
T ss_pred cEEEEECCCCCH-----------HHHHHHHHHHHHHHhhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEE
Confidence 899999998754 12333444443322111 123578999999999999999999999999999999999
Q ss_pred eCcccccccCCCccccccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCC
Q 036830 113 PDPVLQLHTTRSWDFLAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFK 190 (760)
Q Consensus 113 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~ 190 (760)
+++.++.+ ..+| ++....+... ....|..+ |+||+|+|||||||++||+|.+... |. +|+
T Consensus 145 pd~~v~~~-~~pW---gL~~i~~~~~-~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~~ 206 (692)
T 2p4e_P 145 EDSSVFAQ-SIPW---NLERITPPRY-RADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DFE 206 (692)
T ss_dssp EEEEEEEC------------------------------------------------------------------------
T ss_pred eccccccC-CCCc---chhhcccccc-cccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------ccc
Confidence 99987652 2334 3333221111 12356655 9999999999999999999985210 10 110
Q ss_pred cccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-C
Q 036830 191 KSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-C 269 (760)
Q Consensus 191 ~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~ 269 (760)
.+.+. +.......+.|.+||||||||||+|+. .||||+|+|+.+||+++.| +
T Consensus 207 ------------~~~d~-dg~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g 259 (692)
T 2p4e_P 207 ------------NVPEE-DGTRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKG 259 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------cccCC-CCCcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCC
Confidence 00000 000001345788999999999999874 5999999999999998877 7
Q ss_pred CHHHHHHHHHHHHhC------CCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC-ccCCCCce
Q 036830 270 SGAAILQAIDDAIHD------GVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT-VANTAPWL 342 (760)
Q Consensus 270 ~~~~i~~ai~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~v 342 (760)
+.+++++||+|++++ +++|||||||+. . ...+..+++++.++|++||+||||+|.+... .++..|++
T Consensus 260 ~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~--~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~v 333 (692)
T 2p4e_P 260 TVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG--Y----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEV 333 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHhhhhcccCCceEEEecCCCC--C----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCE
Confidence 889999999999986 899999999976 2 2445566688899999999999999976543 46778999
Q ss_pred EEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhh
Q 036830 343 FTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAE 422 (760)
Q Consensus 343 itVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~ 422 (760)
|+|||++.+...
T Consensus 334 ItVGA~d~~~~~-------------------------------------------------------------------- 345 (692)
T 2p4e_P 334 ITVGATNAQDQP-------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEcCCCCc--------------------------------------------------------------------
Confidence 999997643100
Q ss_pred hcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCC
Q 036830 423 NVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTEN 502 (760)
Q Consensus 423 ~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~ 502 (760)
...-+.||+|||.
T Consensus 346 --------------------------------------------------------------a~~ss~fSn~G~~----- 358 (692)
T 2p4e_P 346 --------------------------------------------------------------VTLGTLGTNFGRC----- 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------cccccccCCCCCc-----
Confidence 0001238999984
Q ss_pred cccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 036830 503 ILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVY 581 (760)
Q Consensus 503 ~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~ 581 (760)
|||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++||.+.
T Consensus 359 ---vDI~APG~~I~St~~~~~------------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 359 ---VDLFAPGEDIIGASSDCS------------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred ---eeEEecCCcEEeeccCCC------------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 599999999999987532 5789999999999999999999999999999999999999999864
|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-55 Score=496.59 Aligned_cols=336 Identities=21% Similarity=0.258 Sum_probs=262.5
Q ss_pred cceEEEeccceeeEEEEeCHHHHHHhcC-CCCeEEEEeCcccccccCCCc----------cccccccCCCcccccccccc
Q 036830 77 LSLIHHYKHAFKGFSAILTDSEASALSG-HDHVVSVFPDPVLQLHTTRSW----------DFLAAAAKPAKNTWFNHKYH 145 (760)
Q Consensus 77 ~~~~~~y~~~~~g~s~~l~~~~i~~L~~-~p~V~~V~~~~~~~~~~~~s~----------~~~g~~~~~~~~~~~~~~~~ 145 (760)
.++.+.|.. |++|+++++++++++|++ +|+|++|++++.+++...... ..|++..... ...+|+
T Consensus 66 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~----~~~~~~ 140 (471)
T 3t41_A 66 LNVVYNIPE-LHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITN----NGASYD 140 (471)
T ss_dssp CEEEEEEGG-GTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT----TTGGGG
T ss_pred CEEEEecCC-ccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccC----cHHHHh
Confidence 457788855 999999999999999999 999999999998877543221 1233332221 236888
Q ss_pred cC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCC-CCCCCCCCCCCCC
Q 036830 146 KA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAST-NKDNSGSSRDPLG 222 (760)
Q Consensus 146 ~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~-~~~~~~~~~d~~g 222 (760)
.+ |+||+|||||||||++||+|.+.- |.+. ..++....|..... ...+...+.|..|
T Consensus 141 ~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~d~~g 200 (471)
T 3t41_A 141 DLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS-------------KNLVPLNGFRGTEPEETGDVHDVNDRKG 200 (471)
T ss_dssp GCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC-------------EECCCTTCGGGCCTTCCCCTTCCCCSSS
T ss_pred ccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC-------------cccccCCCccCCCcccCCCCCCCcCCCC
Confidence 76 999999999999999999998521 1110 01111111111110 0112245678999
Q ss_pred ccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccCCCC----
Q 036830 223 HGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNS---- 298 (760)
Q Consensus 223 HGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~---- 298 (760)
|||||||||+|++ .+.||||+|+|+.+|++++..+..+++++||+|+++++++|||||||....
T Consensus 201 HGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~ 268 (471)
T 3t41_A 201 HGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKN 268 (471)
T ss_dssp HHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTT
T ss_pred ccchhhheeecCC------------ceeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccc
Confidence 9999999999764 247999999999999998866899999999999999999999999998420
Q ss_pred ---CC----CCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC------------------ccCCCCceEEecccccccc
Q 036830 299 ---EA----DYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT------------------VANTAPWLFTVAASTIDRD 353 (760)
Q Consensus 299 ---~~----~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~~p~vitVgA~~~~~~ 353 (760)
.. ....+.+..+++.+.++|++||+||||+|..... .++..+++|+|||++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~-- 346 (471)
T 3t41_A 269 DHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK-- 346 (471)
T ss_dssp CCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT--
T ss_pred cccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC--
Confidence 00 0123567888889999999999999999976542 56778999999986432
Q ss_pred ceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEc
Q 036830 354 FQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFIN 433 (760)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~ 433 (760)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCc
Q 036830 434 DDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGV 513 (760)
Q Consensus 434 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~ 513 (760)
+.+++||++||+. |||+|||+
T Consensus 347 ----------------------------------------------------~~~a~fS~~G~~~-------~di~APG~ 367 (471)
T 3t41_A 347 ----------------------------------------------------SNLSEFSNFGMNY-------TDIAAPGG 367 (471)
T ss_dssp ----------------------------------------------------SSBCTTCCBCTTT-------CCEEEECC
T ss_pred ----------------------------------------------------CCCCCccCCCCCC-------CeEEecCC
Confidence 5578999999963 59999998
Q ss_pred e----------------------EEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCC-CCCHHHH
Q 036830 514 A----------------------VLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRR-KWTYSMI 570 (760)
Q Consensus 514 ~----------------------I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-~ls~~~i 570 (760)
+ |+++++. +.|..++|||||||||||++|||+|++| .++|++|
T Consensus 368 ~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~--------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v 433 (471)
T 3t41_A 368 SFAYLNQFGVDKWMNEGYMHKENILTTANN--------------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKA 433 (471)
T ss_dssp CCHHHHHHHHHHHHHTTTHHHHSEEEECTT--------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred CcccccccccccccccccccCceeEecCCC--------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHH
Confidence 7 8999876 7899999999999999999999999999 8999999
Q ss_pred HHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCce
Q 036830 571 KSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGL 616 (760)
Q Consensus 571 k~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 616 (760)
|++|++||++.. ..++..||||+||+.+||+.+.
T Consensus 434 ~~~L~~tA~~~~------------~~~~~~~G~G~vd~~~Al~~a~ 467 (471)
T 3t41_A 434 IELLYQHGTSKN------------NKPFSRYGHGELDVYKALNVAN 467 (471)
T ss_dssp HHHHHHHSBCCS------------CCCHHHHTTCBBCHHHHTTTTC
T ss_pred HHHHHHhCCCCC------------CCCcCccccChhCHHHHHHHHH
Confidence 999999999652 2567789999999999998543
|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-54 Score=501.28 Aligned_cols=373 Identities=23% Similarity=0.227 Sum_probs=272.8
Q ss_pred CCCCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCH----HHHHHh
Q 036830 27 SNEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTD----SEASAL 102 (760)
Q Consensus 27 ~~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~----~~i~~L 102 (760)
....+++|||.||+.... +++++.+ ..++.+.+.. +++++++++. +.+++|
T Consensus 27 ~~~~~~~~IV~~k~~~~~-----------------~~~~~~~-------g~~v~~~~~~-i~~~~~~~~~~~~~~~~~~l 81 (671)
T 1r6v_A 27 GEYTEGKILVGYNDRSEV-----------------DKIVKAV-------NGKVVLELPQ-IKVVSIKLNGMTVKQAYDKI 81 (671)
T ss_dssp TSBCTTEEEEEESSHHHH-----------------HHHHHHH-------TCEEEEEEGG-GTEEEEECSSCCHHHHHHHH
T ss_pred CccCCccEEEEECCCcCH-----------------HHHHHhc-------CCeEEEEcCC-CcEEEEEeCCcCHHHHHHHH
Confidence 345789999999975311 2222222 2356777755 8999999864 335667
Q ss_pred c--CCCCeEEEEeCcccccccCC---------------------------CccccccccCCCcccccccc-cccC-CCCe
Q 036830 103 S--GHDHVVSVFPDPVLQLHTTR---------------------------SWDFLAAAAKPAKNTWFNHK-YHKA-ASDI 151 (760)
Q Consensus 103 ~--~~p~V~~V~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~~~~~~~~-~~~~-G~Gv 151 (760)
+ ++|+|++|||+..+++.... ....|++.. +++..+ |+.. |+||
T Consensus 82 ~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~-----I~~~~a~w~~~tG~gV 156 (671)
T 1r6v_A 82 KALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEA-----IGVTQQLWEEASGTNI 156 (671)
T ss_dssp TTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHH-----TTCCHHHHHHCSCTTC
T ss_pred HhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhc-----cCCchhhhhccCCCCC
Confidence 5 48999999999876543100 001122222 235566 8877 9999
Q ss_pred EEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhc
Q 036830 152 VIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTA 231 (760)
Q Consensus 152 ~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~ 231 (760)
+|||||||||++||+|.+. .+.+ ...+.+.... ...+..|.+||||||||||
T Consensus 157 ~VAVIDTGVd~~HpdL~~~-------~~~g-------------------~~~~~~~~~p--~~~d~~d~~gHGThVAGiI 208 (671)
T 1r6v_A 157 IVAVVDTGVDGTHPDLEGQ-------VIAG-------------------YRPAFDEELP--AGTDSSYGGSAGTHVAGTI 208 (671)
T ss_dssp EEEEEESCCBTTSGGGTTT-------BCCE-------------------EEGGGTEEEC--TTCBCCTTCSHHHHHHHHH
T ss_pred EEEEEeCCCCCCCcccccc-------EEec-------------------ccccCCCcCC--CCCCCccCCCcchhhhhhh
Confidence 9999999999999999742 1111 0111110000 0123456789999999999
Q ss_pred ccccccccccccccCCcccccCCCCeEEEEEeccC------CC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCC
Q 036830 232 AGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKE------GG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMN 304 (760)
Q Consensus 232 Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~ 304 (760)
||..+ +..+.||||+|+|+.+|++++ .+ ...+.+++||+||+++|++|||||||... ..
T Consensus 209 Aa~~n---------g~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-----~s 274 (671)
T 1r6v_A 209 AAKKD---------GKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-----YS 274 (671)
T ss_dssp HCCCS---------SSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC-----CC
T ss_pred hccCC---------CCceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC-----CC
Confidence 99741 223579999999999999976 23 45678999999999999999999999873 34
Q ss_pred cHHHHHHHHHHhCCcEEEEecCCCCCCC-CCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceee
Q 036830 305 DPIAIGALHAQQRGVVVICSAGNDGPYP-FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYP 383 (760)
Q Consensus 305 ~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p 383 (760)
..+..++++|.++|++||+||||+|... ..+++..|++|+|||++.+.
T Consensus 275 ~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g------------------------------- 323 (671)
T 1r6v_A 275 YTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG------------------------------- 323 (671)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET-------------------------------
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC-------------------------------
Confidence 6788888999999999999999999765 56678889999999865321
Q ss_pred eEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHH
Q 036830 384 LAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYI 463 (760)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~ 463 (760)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCC----CCCCCCCCcce
Q 036830 464 NSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGG----IPAGEKPATYA 539 (760)
Q Consensus 464 ~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~----~~~~~~~~~y~ 539 (760)
....++.||++||.. ||+|||++|+++++........ .......+.|.
T Consensus 324 --------------------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~ 375 (671)
T 1r6v_A 324 --------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYD 375 (671)
T ss_dssp --------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEE
T ss_pred --------------------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceE
Confidence 002378999999976 9999999999998753211000 00111235799
Q ss_pred eeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCceeee
Q 036830 540 LRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFK 619 (760)
Q Consensus 540 ~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~ 619 (760)
.++|||||||||||++|||+|++|+|++++||++|++||+++.. +..+..||||+||+.+|++..+..+
T Consensus 376 ~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~-----------~g~d~~~G~G~vna~~Al~~~l~~~ 444 (671)
T 1r6v_A 376 YYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG-----------NGWDHDTGYGLVKLDAALQGPLPTQ 444 (671)
T ss_dssp EEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS-----------SSCBTTTBTCBCCHHHHHHCCCCSS
T ss_pred EecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCC-----------CCCCCCcccceeCHHHHhhhhcCCC
Confidence 99999999999999999999999999999999999999997643 2356789999999999999776655
Q ss_pred cC
Q 036830 620 TT 621 (760)
Q Consensus 620 ~~ 621 (760)
..
T Consensus 445 ~~ 446 (671)
T 1r6v_A 445 GG 446 (671)
T ss_dssp SE
T ss_pred CC
Confidence 43
|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-53 Score=472.80 Aligned_cols=166 Identities=23% Similarity=0.280 Sum_probs=134.5
Q ss_pred cccccccCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRD 219 (760)
Q Consensus 140 ~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d 219 (760)
+..+|+.+|+||+|||||||||++||+|.+. .|. + +++... .+...+.|
T Consensus 13 ~~~~w~~~g~gv~VaViDtGvd~~Hp~l~~~-------~~~-------------------~-~~~~~~----~~~~~~~d 61 (441)
T 1y9z_A 13 ATVLSDSQAGNRTICIIDSGYDRSHNDLNAN-------NVT-------------------G-TNNSGT----GNWYQPGN 61 (441)
T ss_dssp CSSSCCTTGGGCEEEEEESCCCTTSTTTTTS-------EEE-------------------E-CCCTTS----CCTTCCCS
T ss_pred hhhhhhcCCCCcEEEEEcCCCCCCChhHhcC-------ccc-------------------C-cccCCC----CCCCCCCC
Confidence 6689998877999999999999999999741 111 1 111111 01234678
Q ss_pred CCCccchhhhhcccccccccccccccCCcccccCCCC--eEEEEEeccCCC-CCHHHHHHHHHHHHhC-CCcEEEecccC
Q 036830 220 PLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFS--RIASYKACKEGG-CSGAAILQAIDDAIHD-GVDIISISIGL 295 (760)
Q Consensus 220 ~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~a~~~-g~dVIN~SlG~ 295 (760)
..||||||||||+|..+ +..+.||||+| +|+.+|++++.+ +..+++++||+||+++ |++|||||||.
T Consensus 62 ~~gHGT~vAgiia~~~~---------~~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G~ 132 (441)
T 1y9z_A 62 NNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGG 132 (441)
T ss_dssp SCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCB
T ss_pred CCCcHHHHHHHHhcccC---------CCCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCCC
Confidence 89999999999999762 12358999995 999999998877 8888999999999999 99999999998
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccc
Q 036830 296 SNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTI 350 (760)
Q Consensus 296 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~ 350 (760)
.. ....+..++.++.++|++||+||||+|.....+++..+++|+|||++.
T Consensus 133 ~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~ 182 (441)
T 1y9z_A 133 SG-----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDS 182 (441)
T ss_dssp SC-----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECT
T ss_pred CC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECC
Confidence 74 234667788899999999999999999887788888999999998653
|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=433.59 Aligned_cols=257 Identities=30% Similarity=0.362 Sum_probs=212.0
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
...+|+.+ |+||+|||||||||++||+|.+ ++...++|.++ ..++
T Consensus 20 ~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~~~------~~~~ 66 (280)
T 1dbi_A 20 TDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVDN------DYDP 66 (280)
T ss_dssp HHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTTT------BSCC
T ss_pred cHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc---------------------------CcccceeccCC------CCCC
Confidence 77899998 5599999999999999999973 23334444432 1345
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.|..+|||||||||+|...++ ..+.||||+|+|+.+|++++.+ +..+++++||+|++++|++|||||||..
T Consensus 67 ~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~ 138 (280)
T 1dbi_A 67 MDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCD 138 (280)
T ss_dssp CCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSC
T ss_pred CCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCC
Confidence 788999999999999976432 2347999999999999998776 8889999999999999999999999987
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccC
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNL 376 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 376 (760)
. ....+..+++++.++|++||+||||+|......++..+++|+|||++.+
T Consensus 139 ~-----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 188 (280)
T 1dbi_A 139 C-----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY------------------------- 188 (280)
T ss_dssp C-----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-------------------------
T ss_pred C-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC-------------------------
Confidence 3 3467788889999999999999999998777778888999999986432
Q ss_pred CCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhH
Q 036830 377 SRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAG 456 (760)
Q Consensus 377 ~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g 456 (760)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCC
Q 036830 457 FRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPA 536 (760)
Q Consensus 457 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~ 536 (760)
+.++.||++||.. ||+|||++|+++++. +
T Consensus 189 -----------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~--------------~ 217 (280)
T 1dbi_A 189 -----------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITG--------------N 217 (280)
T ss_dssp -----------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETT--------------T
T ss_pred -----------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCC--------------C
Confidence 4578999999865 999999999999876 7
Q ss_pred cceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 537 ~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
.|..++|||||||||||++|||++ |.+++.+||++|++||+++.. ....||+|+||+.+|++
T Consensus 218 ~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 218 RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-------------BTTTBSSEECCHHHHHT
T ss_pred CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-------------CCCcccCCEECHHHHhc
Confidence 899999999999999999999987 899999999999999997632 23579999999999986
|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-52 Score=434.22 Aligned_cols=255 Identities=31% Similarity=0.399 Sum_probs=216.1
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
+..+|+.+ |+||+|+|||||||++||+|+. ...++|..+ ....
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~------~~~~ 57 (274)
T 1r0r_E 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLNV-----------------------------VGGASFVAG------EAYN 57 (274)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECSTT------CCTT
T ss_pred CHHHHhcCCCCCCCEEEEEcCCCCCCCHhHcC-----------------------------CCCccccCC------CCCC
Confidence 67899988 9999999999999999999941 112223222 1235
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.|..+|||||||||+|..+ ...+.||||+|+|+.+|+++..+ +..+++++||+|+++++++|||||||..
T Consensus 58 ~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 128 (274)
T 1r0r_E 58 TDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGA 128 (274)
T ss_dssp CCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCCCCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 6789999999999999741 22357999999999999998776 7889999999999999999999999998
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC----CCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeee
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP----FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 372 (760)
. ..+.+..+++++.++|++||+||||+|... ..+++..|++|+|||++.+
T Consensus 129 ~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------- 182 (274)
T 1r0r_E 129 S-----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN--------------------- 182 (274)
T ss_dssp S-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred C-----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC---------------------
Confidence 4 346778888999999999999999999753 3456777899999986432
Q ss_pred cccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEec
Q 036830 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452 (760)
Q Consensus 373 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~ 452 (760)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCC
Q 036830 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~ 532 (760)
+.++.||++||.+ ||+|||++|+++++.
T Consensus 183 ---------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~----------- 210 (274)
T 1r0r_E 183 ---------------------------------SNRASFSSVGAEL--------EVMAPGAGVYSTYPT----------- 210 (274)
T ss_dssp ---------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT-----------
T ss_pred ---------------------------------CCcCccCCCCCCc--------eEEeCCCCeEeecCC-----------
Confidence 4568899999854 999999999999876
Q ss_pred CCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccC
Q 036830 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKAL 612 (760)
Q Consensus 533 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al 612 (760)
+.|..++|||||||||||++|||+|++|+|++++||++|++||+++. ++..||||+||+.+|+
T Consensus 211 ---~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~~~~~~A~ 273 (274)
T 1r0r_E 211 ---NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG--------------SSFYYGKGLINVEAAA 273 (274)
T ss_dssp ---TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------------CHHHHTTCBCCHHHHT
T ss_pred ---CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------------CCCCcccCccCHHHHh
Confidence 78999999999999999999999999999999999999999999651 4678999999999998
Q ss_pred C
Q 036830 613 N 613 (760)
Q Consensus 613 ~ 613 (760)
+
T Consensus 274 ~ 274 (274)
T 1r0r_E 274 Q 274 (274)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=431.76 Aligned_cols=254 Identities=31% Similarity=0.420 Sum_probs=217.9
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
+..+|+.+ |+||+|+|||||| .+||+|+. ...++|..+ ...+
T Consensus 13 ~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~-----------------------------~~~~~~~~~------~~~~ 56 (269)
T 1gci_A 13 APAAHNRGLTGSGVKVAVLDTGI-STHPDLNI-----------------------------RGGASFVPG------EPST 56 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCC-CCCTTCCE-----------------------------EEEEECSTT------CCSC
T ss_pred cHHHHhcCCCCCCCEEEEECCCC-CCCHhhcc-----------------------------cCCcccCCC------CCCC
Confidence 67899988 9999999999999 89999941 112223222 1335
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ +..+++++||+|+++++++|||||||..
T Consensus 57 ~d~~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~ 127 (269)
T 1gci_A 57 QDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSP 127 (269)
T ss_dssp SCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred CCCCCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCC
Confidence 6789999999999999741 22347999999999999998776 7889999999999999999999999988
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccC
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNL 376 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 376 (760)
. ....+..+++++.++|++||+||||+|.....+++..+++|+|||++.+
T Consensus 128 ~-----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 177 (269)
T 1gci_A 128 S-----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------------------- 177 (269)
T ss_dssp S-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-------------------------
T ss_pred C-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-------------------------
Confidence 4 2467788889999999999999999998877888889999999986432
Q ss_pred CCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhH
Q 036830 377 SRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAG 456 (760)
Q Consensus 377 ~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g 456 (760)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCC
Q 036830 457 FRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPA 536 (760)
Q Consensus 457 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~ 536 (760)
+.++.||++||.+ ||+|||++|+++++. +
T Consensus 178 -----------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~--------------~ 206 (269)
T 1gci_A 178 -----------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPG--------------S 206 (269)
T ss_dssp -----------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT--------------T
T ss_pred -----------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCC--------------C
Confidence 4578999999965 999999999999876 7
Q ss_pred cceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 537 ~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. +++.||||+||+.+|++
T Consensus 207 ~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 207 TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--------------CCCCcccCccCHHHHcC
Confidence 8999999999999999999999999999999999999999999652 46679999999999985
|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-51 Score=432.71 Aligned_cols=258 Identities=31% Similarity=0.402 Sum_probs=217.3
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
...+|..+ |+||+|||||||||++||+|+. ..+++|..+ +....
T Consensus 13 ~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~-----~~~~~ 58 (281)
T 1to2_E 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPS-----ETNPF 58 (281)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTT-----CCCTT
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCC-----CCCCC
Confidence 67899988 9999999999999999999952 111222211 11223
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.|..+|||||||||+|..+ ...+.||||+|+|+.+|+++..+ +..++++++|+|+++++++|||||||..
T Consensus 59 ~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 129 (281)
T 1to2_E 59 QDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGP 129 (281)
T ss_dssp CCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCCCCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCC
Confidence 6789999999999999741 22357999999999999998776 7889999999999999999999999988
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC----CCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeee
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP----FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 372 (760)
. ....+..+++++.++|++||+||||+|... ..+++..|++|+|||++.+
T Consensus 130 ~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------- 183 (281)
T 1to2_E 130 S-----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS--------------------- 183 (281)
T ss_dssp C-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred C-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC---------------------
Confidence 4 346788888999999999999999999763 3456777999999985421
Q ss_pred cccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEec
Q 036830 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452 (760)
Q Consensus 373 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~ 452 (760)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCC
Q 036830 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~ 532 (760)
+.++.||++||.. ||+|||++|+++++.
T Consensus 184 ---------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~----------- 211 (281)
T 1to2_E 184 ---------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPG----------- 211 (281)
T ss_dssp ---------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETT-----------
T ss_pred ---------------------------------CCcCCcCCCCCCc--------eEEecCCCeEeecCC-----------
Confidence 4578999999965 999999999999876
Q ss_pred CCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccC
Q 036830 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKAL 612 (760)
Q Consensus 533 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al 612 (760)
+.|..++|||||||+|||++|||+|++|+|++++||++|++||+++. +++.||||+||+.+|+
T Consensus 212 ---~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~v~~~~a~ 274 (281)
T 1to2_E 212 ---NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------DSFYYGKGLINVQAAA 274 (281)
T ss_dssp ---TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------CHHHHTTCBCCHHHHT
T ss_pred ---CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------------CCCCcccceecHHHHh
Confidence 78999999999999999999999999999999999999999999651 4678999999999999
Q ss_pred CCc
Q 036830 613 NPG 615 (760)
Q Consensus 613 ~~~ 615 (760)
++.
T Consensus 275 ~~~ 277 (281)
T 1to2_E 275 QHH 277 (281)
T ss_dssp SSS
T ss_pred hhh
Confidence 853
|
| >4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-53 Score=460.03 Aligned_cols=302 Identities=20% Similarity=0.207 Sum_probs=198.0
Q ss_pred ccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccce-----ecccccCCCCCCC
Q 036830 139 WFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKL-----IGARHCSRASTNK 211 (760)
Q Consensus 139 ~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki-----~g~~~~~~~~~~~ 211 (760)
+..++|+.+ |+||+|||||||||++||+|++....+....|+..++....... ..+..+ .+...........
T Consensus 19 G~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 97 (357)
T 4h6x_A 19 GLADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRDQGLKGKEKEEALEAVI 97 (357)
T ss_dssp THHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHHHTCCSHHHHHHHHHHC
T ss_pred CHHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccCcccccccccccccccc
Confidence 466899988 68999999999999999999977666666777655443211000 000000 0000000000000
Q ss_pred CCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC------CCHHHHHHHHHHHHhCC
Q 036830 212 DNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG------CSGAAILQAIDDAIHDG 285 (760)
Q Consensus 212 ~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g------~~~~~i~~ai~~a~~~g 285 (760)
.+..++.|.+||||||||||||+.. +.+.||||+|+|+.+|++.... ....++++||+|+++.|
T Consensus 98 ~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g 167 (357)
T 4h6x_A 98 PDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELG 167 (357)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTT
T ss_pred CCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcC
Confidence 1123345678999999999999752 2357999999999999975421 44567899999999999
Q ss_pred CcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCee
Q 036830 286 VDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKA 365 (760)
Q Consensus 286 ~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~ 365 (760)
++|||||||... ......+.+..++.++.++|++||+||||+|.....+++..|++|+|||++.+
T Consensus 168 ~~Vin~S~G~~~-~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 232 (357)
T 4h6x_A 168 ANIIHCAFCRPT-QTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD-------------- 232 (357)
T ss_dssp CSEEEEC------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT--------------
T ss_pred CCEEeeccccCC-ccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC--------------
Confidence 999999999875 33445677888889999999999999999998888888888999999986432
Q ss_pred EeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcc
Q 036830 366 IKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGI 445 (760)
Q Consensus 366 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 445 (760)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCC
Q 036830 446 LPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDR 525 (760)
Q Consensus 446 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~ 525 (760)
+.++.||+||+.. .||||+|||++|+++++..
T Consensus 233 ----------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~~--- 264 (357)
T 4h6x_A 233 ----------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGAQPCT--- 264 (357)
T ss_dssp ----------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEECCTTC---
T ss_pred ----------------------------------------CcccccccCCCCC-----CccceeecCCCeEeccCCC---
Confidence 5678999999753 5899999999999998752
Q ss_pred CCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHh----CCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCC
Q 036830 526 PGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSV----RRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEM 601 (760)
Q Consensus 526 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~ 601 (760)
+.|..++|||||||||||++|||+++ +|.|+++|||++|++||++++.. ....+.+|
T Consensus 265 ----------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~---------~~~~~~~~ 325 (357)
T 4h6x_A 265 ----------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE---------VVEEPERC 325 (357)
T ss_dssp ----------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-----------------------C
T ss_pred ----------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC---------CCCCcccc
Confidence 56778999999999999999999964 56899999999999999976432 23456789
Q ss_pred CCcccCccccCC
Q 036830 602 GAGEINPLKALN 613 (760)
Q Consensus 602 G~G~vn~~~Al~ 613 (760)
|+|+||+.+|++
T Consensus 326 G~G~vn~~~A~~ 337 (357)
T 4h6x_A 326 LRGFVNIPGAMK 337 (357)
T ss_dssp TTCBCCHHHHHH
T ss_pred eeEEecHHHHHH
Confidence 999999999987
|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=443.43 Aligned_cols=263 Identities=27% Similarity=0.378 Sum_probs=215.5
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
+..+|+.+ |+||+|||||||||++||+|.+ ++..+++|..++.. .....
T Consensus 30 ~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~~--~~~~~ 80 (327)
T 2x8j_A 30 APAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYGG--DETNF 80 (327)
T ss_dssp HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGGG--CTTCC
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCCC--CCCCC
Confidence 77899987 9999999999999999999973 23333444433211 11235
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHh------CCCcEEE
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIH------DGVDIIS 290 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~------~g~dVIN 290 (760)
.|..||||||||||+|..+ +..+.||||+|+|+.+|+++..+ +..+++++||+||++ .+++|||
T Consensus 81 ~d~~gHGT~VAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin 151 (327)
T 2x8j_A 81 SDNNGHGTHVAGTVAAAET---------GSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIIT 151 (327)
T ss_dssp CCSSSHHHHHHHHHHCCCC---------SSBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEE
T ss_pred CCCCCchHHHHHHHhccCC---------CCCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEE
Confidence 6889999999999999842 22357999999999999998877 788999999999999 8999999
Q ss_pred ecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCccCCCCceEEeccccccccceeeEEeCCCee
Q 036830 291 ISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP-----FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKA 365 (760)
Q Consensus 291 ~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~ 365 (760)
||||... ....+..+++++.++|++||+||||+|... ..+++..+++|+|||++.+
T Consensus 152 ~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~-------------- 212 (327)
T 2x8j_A 152 MSLGGPT-----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD-------------- 212 (327)
T ss_dssp ECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT--------------
T ss_pred ECCCcCC-----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC--------------
Confidence 9999874 346778888999999999999999999652 3556778999999986432
Q ss_pred EeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcc
Q 036830 366 IKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGI 445 (760)
Q Consensus 366 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~ 445 (760)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCC
Q 036830 446 LPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDR 525 (760)
Q Consensus 446 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~ 525 (760)
+.++.||++||.+ ||+|||++|+++++.
T Consensus 213 ----------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~---- 240 (327)
T 2x8j_A 213 ----------------------------------------LRLSDFTNTNEEI--------DIVAPGVGIKSTYLD---- 240 (327)
T ss_dssp ----------------------------------------CCBSCC---CCCC--------SEEEECSSEEEECST----
T ss_pred ----------------------------------------CCCCCccCCCCCc--------eEecCcCceEeecCC----
Confidence 4578999999854 999999999999876
Q ss_pred CCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHh-----CCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCC
Q 036830 526 PGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSV-----RRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHE 600 (760)
Q Consensus 526 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~ 600 (760)
+.|..++|||||||+|||++|||+|+ +|.+++.+||++|++||+++. .++..
T Consensus 241 ----------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g-------------~~~~~ 297 (327)
T 2x8j_A 241 ----------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG-------------FTAQA 297 (327)
T ss_dssp ----------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS-------------SCHHH
T ss_pred ----------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC-------------CCCCc
Confidence 78999999999999999999999999 999999999999999999652 25678
Q ss_pred CCCcccCccccCCC
Q 036830 601 MGAGEINPLKALNP 614 (760)
Q Consensus 601 ~G~G~vn~~~Al~~ 614 (760)
+|+|+||+.+|++.
T Consensus 298 ~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 298 EGNGFLTLDLVERI 311 (327)
T ss_dssp HTTCEECTTHHHHH
T ss_pred eeeeEECHHHHHHh
Confidence 99999999999884
|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-51 Score=430.22 Aligned_cols=257 Identities=28% Similarity=0.384 Sum_probs=220.0
Q ss_pred cccccccC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSR 218 (760)
Q Consensus 140 ~~~~~~~~-G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 218 (760)
+..+|+.+ |+||+|||||||||++||+|.+ ++...++|.++ ...+.
T Consensus 20 ~~~aw~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~------~~~~~ 66 (279)
T 1thm_A 20 APQAWDIAEGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDN------DSTPQ 66 (279)
T ss_dssp HHHHHTTCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTT------BSCCC
T ss_pred hHHHHhcCCCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccCC------CCCCC
Confidence 77899999 9999999999999999999973 23334444432 13457
Q ss_pred CCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCC
Q 036830 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSN 297 (760)
Q Consensus 219 d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~ 297 (760)
|..+|||||||||+|...++ ..+.||||+|+|+.+|++++.+ ++.+++++||+||+++|++|||||||...
T Consensus 67 d~~gHGT~vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~ 138 (279)
T 1thm_A 67 NGNGHGTHCAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV 138 (279)
T ss_dssp CSSSHHHHHHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred CCCCcHHHHHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 88999999999999986432 2347999999999999998776 78899999999999999999999999884
Q ss_pred CCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCC
Q 036830 298 SEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLS 377 (760)
Q Consensus 298 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 377 (760)
..+.+..+++++.++|+++|+||||+|.....+++..+++|+|||++.+
T Consensus 139 -----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 187 (279)
T 1thm_A 139 -----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN-------------------------- 187 (279)
T ss_dssp -----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT--------------------------
T ss_pred -----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC--------------------------
Confidence 3467788889999999999999999998877888888999999986432
Q ss_pred CCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHH
Q 036830 378 RSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGF 457 (760)
Q Consensus 378 ~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~ 457 (760)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCc
Q 036830 458 RIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT 537 (760)
Q Consensus 458 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~ 537 (760)
+.++.||++||.. ||+|||++|+++++. +.
T Consensus 188 ----------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~--------------~~ 217 (279)
T 1thm_A 188 ----------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPT--------------ST 217 (279)
T ss_dssp ----------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETT--------------TE
T ss_pred ----------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCC--------------CC
Confidence 4578999999865 999999999999976 78
Q ss_pred ceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 538 YALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 538 y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
|..++|||||||||||++||| ++|.+++++||++|++||+++... ...||+|+||+++|++
T Consensus 218 ~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 218 YASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------------TTTBSSEECCHHHHHH
T ss_pred EEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------------CccccCCeeCHHHHhc
Confidence 999999999999999999999 579999999999999999976421 2568999999999975
|
| >3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-51 Score=432.82 Aligned_cols=262 Identities=23% Similarity=0.249 Sum_probs=210.8
Q ss_pred C-CCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccch
Q 036830 148 A-SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTH 226 (760)
Q Consensus 148 G-~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGTh 226 (760)
| +||+|||||||||++||+|.+.. +.+..++... ......|.+|||||
T Consensus 6 G~~gV~VaViDtGid~~Hpdl~g~~--------------------------~~~~~~~~~~-----~~~~d~~~~gHGT~ 54 (282)
T 3zxy_A 6 GDHNIRVAILDGPVDIAHPCFQGAD--------------------------LTVLPTLAPT-----AARSDGFMSAHGTH 54 (282)
T ss_dssp CCTTSEEEEEESCCCTTSGGGTTCE--------------------------EEECCCSSCC-----CCCTTCHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCCChhHCCCe--------------------------eecCcCCCCC-----CCCCCCCCCCcccc
Confidence 6 79999999999999999997421 1111111111 11223346799999
Q ss_pred hhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC--CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCC
Q 036830 227 TASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG--CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMN 304 (760)
Q Consensus 227 VAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~ 304 (760)
|||||+|+.. ..+.||||+|+|+.+|++.+.+ ....++++||+|+++.+++|||||||... ......
T Consensus 55 VAGiiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~-~~~~~~ 123 (282)
T 3zxy_A 55 VASIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELT-DFGEAD 123 (282)
T ss_dssp HHHHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEE-SSSCCC
T ss_pred eeehhhccCC----------ceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCcccc-cccccc
Confidence 9999998753 2347999999999999986543 67888999999999999999999999764 233445
Q ss_pred cHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeee
Q 036830 305 DPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPL 384 (760)
Q Consensus 305 ~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~ 384 (760)
..+..++..+.++|+++|+||||+|......++..|++|+|||++.+
T Consensus 124 ~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------------------------- 170 (282)
T 3zxy_A 124 GWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH--------------------------------- 170 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT---------------------------------
T ss_pred HHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC---------------------------------
Confidence 67788889999999999999999998887888889999999986432
Q ss_pred EecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHh
Q 036830 385 AYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYIN 464 (760)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~ 464 (760)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcceeeecc
Q 036830 465 SNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGT 544 (760)
Q Consensus 465 ~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGT 544 (760)
+.++.||+||+. ..||||+|||++|+++++. +.|..++||
T Consensus 171 ---------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~--------------~~~~~~sGT 210 (282)
T 3zxy_A 171 ---------------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPG--------------GGTERLSGT 210 (282)
T ss_dssp ---------------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT--------------SCEEEECSH
T ss_pred ---------------------CccccccCCCCC-----ccccceeccCcceeeecCC--------------CceeecCCC
Confidence 456789999874 4689999999999999876 789999999
Q ss_pred cchhhhHHHHHHHHHHhC----CCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 545 SMACPHVTGAAAFIKSVR----RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 545 SmAaP~VAG~aALl~q~~----P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
|||||||||++|||+|++ |.++|++||++|++||++++. ..+.....+|+|+||+.+|++
T Consensus 211 S~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~---------~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 211 AFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD---------DAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------CGGGTTCBCCHHHHHH
T ss_pred cccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC---------CCCCccCceeeeEeCHHHHHH
Confidence 999999999999999875 789999999999999997643 224456789999999999987
|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-51 Score=437.37 Aligned_cols=265 Identities=25% Similarity=0.343 Sum_probs=219.6
Q ss_pred cccccccC-CC--CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-AS--DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGS 216 (760)
Q Consensus 140 ~~~~~~~~-G~--Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 216 (760)
+..+|+.+ |+ ||+|||||||||++||+|.+ ++...++|..+... ....+
T Consensus 17 ~~~aw~~~~G~~~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~~-~~~~~ 68 (320)
T 2z30_A 17 APSVWSITDGSVSVIQVAVLDTGVDYDHPDLAA---------------------------NIAWCVSTLRGKVS-TKLRD 68 (320)
T ss_dssp CGGGTTTCCSCCTTCEEEEEESCBCTTCTTTGG---------------------------GEEEEEECGGGCCB-CCHHH
T ss_pred hHHHHHhcCCCcCCeEEEEECCCCCCCChhHhc---------------------------ccccCccccCCccC-CCCCC
Confidence 77899998 99 99999999999999999974 12222222221100 00112
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhC-----------
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHD----------- 284 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~----------- 284 (760)
..|..||||||||||+|.. + +..+.||||+|+|+.+|+++..+ +..+++++||+||++.
T Consensus 69 ~~d~~gHGT~vAgiia~~~-n--------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~ 139 (320)
T 2z30_A 69 CADQNGHGTHVIGTIAALN-N--------DIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDG 139 (320)
T ss_dssp HBCSSSHHHHHHHHHHCCS-S--------SBSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSS
T ss_pred CCCCCCCHHHHHHHHHccc-C--------CCceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccccccccc
Confidence 3578999999999999973 1 22347999999999999998777 7889999999999987
Q ss_pred ---------CCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccce
Q 036830 285 ---------GVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQ 355 (760)
Q Consensus 285 ---------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~ 355 (760)
+++|||||||... ....+..++.++.++|++||+||||+|.....+++..|++|+|||++.+
T Consensus 140 ~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---- 210 (320)
T 2z30_A 140 IIAGDPDDDAAEVISMSLGGPA-----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN---- 210 (320)
T ss_dssp CCTTCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----
T ss_pred ccccccccCCceEEEecCCCCC-----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC----
Confidence 9999999999984 2466777888999999999999999998877888889999999986432
Q ss_pred eeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCC
Q 036830 356 STVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDD 435 (760)
Q Consensus 356 ~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~ 435 (760)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceE
Q 036830 436 EKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAV 515 (760)
Q Consensus 436 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I 515 (760)
+.++.||++|| +|+|||++|
T Consensus 211 --------------------------------------------------~~~~~~S~~g~----------~v~APG~~i 230 (320)
T 2z30_A 211 --------------------------------------------------DNIASFSNRQP----------EVSAPGVDI 230 (320)
T ss_dssp --------------------------------------------------SCBCTTSCSSC----------SEEEECSSE
T ss_pred --------------------------------------------------CCcCcccCCCC----------CEEeCCCCe
Confidence 45789999997 789999999
Q ss_pred EeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhC-------------CCCCHHHHHHHHHhcccccC
Q 036830 516 LAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVR-------------RKWTYSMIKSALMTTATVYD 582 (760)
Q Consensus 516 ~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------P~ls~~~ik~~L~~TA~~~~ 582 (760)
+++++. +.|..++|||||||||||++|||+|++ |.|++.+||++|++||+++.
T Consensus 231 ~s~~~~--------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~ 296 (320)
T 2z30_A 231 LSTYPD--------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLG 296 (320)
T ss_dssp EEEETT--------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCS
T ss_pred EEeccC--------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCC
Confidence 999876 789999999999999999999999999 99999999999999999763
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccCccccCCCc
Q 036830 583 NTGTPLTNSSGNNANPHEMGAGEINPLKALNPG 615 (760)
Q Consensus 583 ~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 615 (760)
. +.++..||||+||+.+|++.+
T Consensus 297 ~-----------~g~~~~~G~G~vd~~~A~~~a 318 (320)
T 2z30_A 297 P-----------TGWDADYGYGVVRAALAVQAA 318 (320)
T ss_dssp S-----------SSSBTTTBTCBCCHHHHHHHH
T ss_pred C-----------CCCCCCcCCceeCHHHHHHHH
Confidence 2 335678999999999998743
|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-50 Score=427.59 Aligned_cols=279 Identities=29% Similarity=0.319 Sum_probs=222.5
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
+..+|+.+ |+||+|||||||||++||+|.+ ++...++|...... .....
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~---------------------------~~~~~~~~~~~~~~--~~~~~ 65 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVN---------------------------NVEQCKDFTGATTP--INNSC 65 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEESSSSSSC--EETCC
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhh---------------------------cccccccccCCCCC--CCCCC
Confidence 67899987 9999999999999999999974 12223333322100 11335
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCC-----cEEEe
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGV-----DIISI 291 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~-----dVIN~ 291 (760)
.|..||||||||||+|...+ ....+.||||+|+|+.+|++.+.+ +..+++++||+|++++++ +||||
T Consensus 66 ~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~ 138 (310)
T 2ixt_A 66 TDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISM 138 (310)
T ss_dssp CCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 67899999999999987522 123457999999999999998776 788999999999999888 99999
Q ss_pred cccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC--CCccCCCCceEEeccccccccceeeEEeCCCeeEeee
Q 036830 292 SIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP--FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGT 369 (760)
Q Consensus 292 SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~ 369 (760)
|||... ....+..+++++.++|++||+||||+|... ..+++..|++|+|||++...
T Consensus 139 S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~----------------- 196 (310)
T 2ixt_A 139 SLGSSA-----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ----------------- 196 (310)
T ss_dssp CCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE-----------------
T ss_pred cCCCCC-----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc-----------------
Confidence 999984 356778888999999999999999999763 45667789999999865210
Q ss_pred eeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceE
Q 036830 370 AISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYA 449 (760)
Q Consensus 370 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~ 449 (760)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCC--ceecccCCCCCCCC----CCcccCceeeCCceEEeeecCCC
Q 036830 450 EVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAP--VVAYFSSRGPGLPT----ENILKPDVAAPGVAVLAAIVPRP 523 (760)
Q Consensus 450 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~~----~~~~KPDI~APG~~I~Sa~~~~~ 523 (760)
..+ .++.||++||.... ..+.||||+|||++|+++++.
T Consensus 197 ----------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~-- 240 (310)
T 2ixt_A 197 ----------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN-- 240 (310)
T ss_dssp ----------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTT--
T ss_pred ----------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCC--
Confidence 002 57889999995321 123599999999999999876
Q ss_pred CCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCC
Q 036830 524 DRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGA 603 (760)
Q Consensus 524 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~ 603 (760)
+.|..++|||||||||||++|||+|++|+|++++||++|++||++++..+. ......++..+||
T Consensus 241 ------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~----~~a~~g~d~~~G~ 304 (310)
T 2ixt_A 241 ------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG----YGAAIGDDYASGF 304 (310)
T ss_dssp ------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS----TTCCSSSBTTTBT
T ss_pred ------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC----cccccCCcccccc
Confidence 789999999999999999999999999999999999999999998754321 1124567889999
Q ss_pred cccCc
Q 036830 604 GEINP 608 (760)
Q Consensus 604 G~vn~ 608 (760)
|++|+
T Consensus 305 G~~~v 309 (310)
T 2ixt_A 305 GFARV 309 (310)
T ss_dssp CBCCC
T ss_pred ceeec
Confidence 99996
|
| >4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-51 Score=436.77 Aligned_cols=272 Identities=25% Similarity=0.300 Sum_probs=219.7
Q ss_pred ccccccccC-C-CCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCC
Q 036830 139 WFNHKYHKA-A-SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGS 216 (760)
Q Consensus 139 ~~~~~~~~~-G-~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 216 (760)
+.+++|+.+ | +||+|||||||||++||+|.+. .+.+..++..+ +...
T Consensus 9 G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~-----~~~~ 57 (306)
T 4h6w_A 9 GLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG-----EANA 57 (306)
T ss_dssp THHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC--------------
T ss_pred CHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC-----CCCC
Confidence 466899998 5 8999999999999999999742 11222222222 1133
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC--CCHHHHHHHHHHHHhCCCcEEEeccc
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG--CSGAAILQAIDDAIHDGVDIISISIG 294 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG 294 (760)
..|.++|||||||||+|+.. +.+.||||+|+|+.+|++.+.+ +....+++||+|+++++++|||+|||
T Consensus 58 ~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g 127 (306)
T 4h6w_A 58 NGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAG 127 (306)
T ss_dssp -CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeecccc
Confidence 45678999999999998752 2357999999999999987543 77888999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecc
Q 036830 295 LSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLS 374 (760)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~ 374 (760)
... ........+..+++.+.++|++||+||||+|.....+++..+++|+|||++..
T Consensus 128 ~~~-~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----------------------- 183 (306)
T 4h6w_A 128 QLT-DAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----------------------- 183 (306)
T ss_dssp EEE-SSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----------------------
T ss_pred ccc-cCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----------------------
Confidence 764 33345567888889999999999999999998877888888999999986432
Q ss_pred cCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechh
Q 036830 375 NLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKV 454 (760)
Q Consensus 375 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~ 454 (760)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCC
Q 036830 455 AGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEK 534 (760)
Q Consensus 455 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~ 534 (760)
+.++.||++|+. ..||||+|||++|+++++.
T Consensus 184 -------------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~------------- 214 (306)
T 4h6w_A 184 -------------------------------GKPVDFSNWGDA-----YQKQGILAPGKDILGAKPN------------- 214 (306)
T ss_dssp -------------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEEEECTT-------------
T ss_pred -------------------------------CCccccccccCC-----cCcceeecCCcCcccccCC-------------
Confidence 446788999864 4689999999999999876
Q ss_pred CCcceeeecccchhhhHHHHHHHHHHh----CCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccc
Q 036830 535 PATYALRSGTSMACPHVTGAAAFIKSV----RRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLK 610 (760)
Q Consensus 535 ~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~ 610 (760)
+.|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+ ......||+|+||+.+
T Consensus 215 -~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~ln~~~ 284 (306)
T 4h6w_A 215 -GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------TDDQSRCLMGKLNILD 284 (306)
T ss_dssp -SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---------CSCGGGGTTCBCCHHH
T ss_pred -CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCCCCcceeecCHHH
Confidence 78999999999999999999999864 599999999999999999774322 2344579999999999
Q ss_pred cCCC
Q 036830 611 ALNP 614 (760)
Q Consensus 611 Al~~ 614 (760)
|++.
T Consensus 285 Av~~ 288 (306)
T 4h6w_A 285 AIEH 288 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9973
|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-50 Score=434.37 Aligned_cols=272 Identities=21% Similarity=0.171 Sum_probs=216.9
Q ss_pred cccccccC-CC--CeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-AS--DIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGS 216 (760)
Q Consensus 140 ~~~~~~~~-G~--Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 216 (760)
...+|+.. |+ ||+||||||||| +||+|.+ ++...++|..+... .....
T Consensus 32 ~~~aw~~~~G~~~gv~VaViDsGid-~Hp~l~~---------------------------~~~~~~~~~~~~~~-~~~~~ 82 (347)
T 2iy9_A 32 LTETTMSLTDKNTPVVVSVVDSGVA-FIGGLSD---------------------------SEFAKFSFTQDGSP-FPVKK 82 (347)
T ss_dssp CCHHHHHTSCTTSCCEEEEEESCCC-CCGGGTT---------------------------CEEEEEECBTTCCS-SCCSS
T ss_pred hHHHHHHhcCCCCCCEEEEEcCCCc-CChhhhc---------------------------CcccCCcccCCCCC-CCCCC
Confidence 66899887 99 999999999999 9999974 12222333322100 01124
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhC------CCcEEE
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHD------GVDIIS 290 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~------g~dVIN 290 (760)
+.|..||||||||||+|. .| +.||||+|+|+.+|++++.+.. ++++||+||+++ +++|||
T Consensus 83 ~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~~Vin 148 (347)
T 2iy9_A 83 SEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEEKIIN 148 (347)
T ss_dssp SHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEEEEEE
T ss_pred CCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCceEEE
Confidence 567889999999999987 12 3799999999999999775533 999999999999 999999
Q ss_pred ecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCC-------CCCccCCCC----------ceEEeccccc--c
Q 036830 291 ISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPY-------PFTVANTAP----------WLFTVAASTI--D 351 (760)
Q Consensus 291 ~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~~p----------~vitVgA~~~--~ 351 (760)
||||... .....+.+..++..+.++|++||+||||+|.. ...+++..+ ++|+|||++. +
T Consensus 149 ~S~G~~~--~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~ 226 (347)
T 2iy9_A 149 ISGGQKG--VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRK 226 (347)
T ss_dssp ESSCBCC--C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCT
T ss_pred eccccCC--CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCC
Confidence 9999873 23455778888899999999999999999975 345667778 9999998764 2
Q ss_pred ccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEE
Q 036830 352 RDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIF 431 (760)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~ 431 (760)
...
T Consensus 227 g~~----------------------------------------------------------------------------- 229 (347)
T 2iy9_A 227 GET----------------------------------------------------------------------------- 229 (347)
T ss_dssp TSC-----------------------------------------------------------------------------
T ss_pred Cce-----------------------------------------------------------------------------
Confidence 100
Q ss_pred EcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeC
Q 036830 432 INDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAP 511 (760)
Q Consensus 432 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 511 (760)
.......+.||++||+ ||||+||
T Consensus 230 --------------------------------------------------~~~~~~~~~fS~~G~~-------~~di~AP 252 (347)
T 2iy9_A 230 --------------------------------------------------PVLHGGGITGSRFGNN-------WVDIAAP 252 (347)
T ss_dssp --------------------------------------------------CCBCCCSSSCBCBCTT-------TCSEEEE
T ss_pred --------------------------------------------------ecccCCCCCCCCCCCC-------CCEEEeC
Confidence 0001345799999994 6799999
Q ss_pred CceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCC
Q 036830 512 GVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNS 591 (760)
Q Consensus 512 G~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~ 591 (760)
|++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...
T Consensus 253 G~~i~s~~~~--------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~------- 311 (347)
T 2iy9_A 253 GQNITFLRPD--------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL------- 311 (347)
T ss_dssp CSSEEEECTT--------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG-------
T ss_pred CCCeEeecCC--------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC-------
Confidence 9999999876 7899999999999999999999999999999999999999999976432
Q ss_pred CCCCCCCCCCCCcccCccccCCCce
Q 036830 592 SGNNANPHEMGAGEINPLKALNPGL 616 (760)
Q Consensus 592 ~~~~~~~~~~G~G~vn~~~Al~~~l 616 (760)
.+..+|+|+||+.+|++..+
T Consensus 312 -----~~~~~G~G~ld~~~A~~~~~ 331 (347)
T 2iy9_A 312 -----VDKVTEGRVLNAEKAISMFC 331 (347)
T ss_dssp -----TTTSGGGEECCHHHHHHHHH
T ss_pred -----CCccccCCEecHHHHHHHHH
Confidence 23689999999999998543
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=467.89 Aligned_cols=354 Identities=24% Similarity=0.232 Sum_probs=247.1
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC---CCHHHHHHHHHHHHh-----CCCcEE
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG---CSGAAILQAIDDAIH-----DGVDII 289 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 289 (760)
.|++||||||||||||.. + +..+.||||+|+|+.+|+++..+ .....++++|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N--------~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-S--------SRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-S--------SSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-C--------CCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999986 2 23457999999999999997643 356778888888887 799999
Q ss_pred EecccCCCCCCCCCCcHHHHHHHHHH-hCCcEEEEecCCCCCCCCC--ccC--CCCceEEeccccccccceeeEEeCCCe
Q 036830 290 SISIGLSNSEADYMNDPIAIGALHAQ-QRGVVVICSAGNDGPYPFT--VAN--TAPWLFTVAASTIDRDFQSTVLLGNGK 364 (760)
Q Consensus 290 N~SlG~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~--~~~--~~p~vitVgA~~~~~~~~~~~~~~~~~ 364 (760)
|||||... .....+.+..++.++. ++|++||+||||+|+...+ .++ ..+++|+|||++........+..
T Consensus 338 NmS~G~~~--~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~---- 411 (1354)
T 3lxu_X 338 NMSYGEHA--NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM---- 411 (1354)
T ss_dssp EECCCCCC--SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--------
T ss_pred EcCCccCC--CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc----
Confidence 99999984 2233467777778776 8999999999999976544 345 37999999997653211000000
Q ss_pred eEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCc
Q 036830 365 AIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERG 444 (760)
Q Consensus 365 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~ 444 (760)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCC
Q 036830 445 ILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPD 524 (760)
Q Consensus 445 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~ 524 (760)
.....+.++.|||+||+. ++++||||+|||++|+++.....
T Consensus 412 ------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~- 452 (1354)
T 3lxu_X 412 ------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM- 452 (1354)
T ss_dssp ------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC------------
T ss_pred ------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-
Confidence 001125689999999997 89999999999999999855322
Q ss_pred CCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHH----hCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCC
Q 036830 525 RPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKS----VRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHE 600 (760)
Q Consensus 525 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~ 600 (760)
+.|..++|||||||||||++|||++ .+|.|++++||++|++||++++. ..++.
T Consensus 453 -----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------~~~~~ 509 (1354)
T 3lxu_X 453 -----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------VDPFA 509 (1354)
T ss_dssp ---------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT------------SCTTT
T ss_pred -----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC------------CCccc
Confidence 6789999999999999999999986 79999999999999999997632 35568
Q ss_pred CCCcccCccccCCCceeeecChhhHHhhhhhcCCC-ccceeccccccccCCCCCCcccccCcCCCcEEEeecccCceeEE
Q 036830 601 MGAGEINPLKALNPGLVFKTTIKDYLRFLCYYGYS-KKNIRSMTNTTFNCPKKSSAKLISNINYPSISISKLARQGAIRT 679 (760)
Q Consensus 601 ~G~G~vn~~~Al~~~l~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~t 679 (760)
||||+||+.+|++..+.|+..+.+++.|+|..+.. ...|.+... . .. ++...+
T Consensus 510 ~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR~~---~----------------------~~-~~~~~t 563 (1354)
T 3lxu_X 510 QGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLRQG---V----------------------QR-NSIDYN 563 (1354)
T ss_dssp SSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEECSS---C----------------------CC-SCEEEE
T ss_pred ccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEecc---c----------------------cC-CceEEE
Confidence 99999999999999999999999999999998853 222211111 0 00 111222
Q ss_pred EE--EEEEecCC----CCeEEE--EEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEEecCCCCceEEEEEEECC----
Q 036830 680 VK--RTVTNVGS----PNATYI--SMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNYGSITWSDD---- 747 (760)
Q Consensus 680 ~~--rtv~N~~~----~~~~y~--~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~~~---- 747 (760)
++ -++.|... ....|. +.+.... --|+ .|+.|.+ .++.++|.|.|++.....+.+++.|..-|-
T Consensus 564 v~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~~G~h~~~v~~~D~~~~~ 639 (1354)
T 3lxu_X 564 VYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQPGVHSAVIRAYDTDCVQ 639 (1354)
T ss_dssp EEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGGCCSEEEEEEEEEEESSCTT
T ss_pred EEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCCCCCcceeEEEEEEEcCCcc
Confidence 22 23322111 111122 2222211 1233 4777777 466788999999977788899999997652
Q ss_pred -ceEEEEEEEEE
Q 036830 748 -RHSVRMMFAVD 758 (760)
Q Consensus 748 -~~~v~~P~~~~ 758 (760)
++..|+|+.|.
T Consensus 640 ~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 640 KGSLFEIPVTVV 651 (1354)
T ss_dssp SCCSEEEEEEEE
T ss_pred cCceEEeeEEEE
Confidence 68999999876
|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=437.43 Aligned_cols=291 Identities=26% Similarity=0.293 Sum_probs=224.0
Q ss_pred ccccccc-cC--CCCeEEEEEeCCCCC------CCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCC
Q 036830 139 WFNHKYH-KA--ASDIVIGVIDTGIWP------ESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAST 209 (760)
Q Consensus 139 ~~~~~~~-~~--G~Gv~VgVIDtGid~------~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~ 209 (760)
+++.+|+ .+ |+||+|||||||||+ .||+|.+ ++...++|.+.
T Consensus 9 ~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~-- 59 (434)
T 1wmd_A 9 KADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT-- 59 (434)
T ss_dssp THHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT--
T ss_pred CchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC--
Confidence 3668897 45 999999999999999 7999863 23333444332
Q ss_pred CCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCC---CHHHHHHHHHHHHhCCC
Q 036830 210 NKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGC---SGAAILQAIDDAIHDGV 286 (760)
Q Consensus 210 ~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~---~~~~i~~ai~~a~~~g~ 286 (760)
..+.|..||||||||||+|++. .+.||||+|+|+.+|+++..+. ..+++.++|+++++.|+
T Consensus 60 -----~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~ 123 (434)
T 1wmd_A 60 -----NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGA 123 (434)
T ss_dssp -----TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTC
T ss_pred -----CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCC
Confidence 3567889999999999998642 2479999999999999987652 45689999999999999
Q ss_pred cEEEecccCCCCCCCCCCcHHHHHHHHH-HhCCcEEEEecCCCCCCCC--CccCCCCceEEeccccccccceeeEEeCCC
Q 036830 287 DIISISIGLSNSEADYMNDPIAIGALHA-QQRGVVVICSAGNDGPYPF--TVANTAPWLFTVAASTIDRDFQSTVLLGNG 363 (760)
Q Consensus 287 dVIN~SlG~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~--~~~~~~p~vitVgA~~~~~~~~~~~~~~~~ 363 (760)
+|||||||... .. ..+....+++++ .++|++||+||||+|.... ..++.++++|+|||++..+....
T Consensus 124 ~Vin~S~G~~~-~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~~------- 193 (434)
T 1wmd_A 124 RIHTNSWGAAV-NG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFG------- 193 (434)
T ss_dssp SEEEECCCBCC-TT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGC-------
T ss_pred eEEEecCCCCc-CC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcccC-------
Confidence 99999999874 11 123445555555 5899999999999997643 45677899999999765321000
Q ss_pred eeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCC
Q 036830 364 KAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTER 443 (760)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~ 443 (760)
T Consensus 194 -------------------------------------------------------------------------------- 193 (434)
T 1wmd_A 194 -------------------------------------------------------------------------------- 193 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCC
Q 036830 444 GILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRP 523 (760)
Q Consensus 444 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~ 523 (760)
. .....+.+++||++||+. ++++||||+|||++|+++++...
T Consensus 194 ~------------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~ 235 (434)
T 1wmd_A 194 S------------------------------------YADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLA 235 (434)
T ss_dssp G------------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTC
T ss_pred c------------------------------------ccCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCC
Confidence 0 001236789999999998 89999999999999999986421
Q ss_pred CCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCC-----CHHHHHHHHHhcccccCCCCCCcCCCCCCCCCC
Q 036830 524 DRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKW-----TYSMIKSALMTTATVYDNTGTPLTNSSGNNANP 598 (760)
Q Consensus 524 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~l-----s~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~ 598 (760)
.... ......+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++. ...++
T Consensus 236 ~~~~--~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~-----------~~~~~ 302 (434)
T 1wmd_A 236 PDSS--FWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-----------LGYPN 302 (434)
T ss_dssp CGGG--SSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS-----------SCSSC
T ss_pred CCcc--cccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC-----------CCCCC
Confidence 1000 000012679999999999999999999999999876 89999999999999642 23577
Q ss_pred CCCCCcccCccccCCCc
Q 036830 599 HEMGAGEINPLKALNPG 615 (760)
Q Consensus 599 ~~~G~G~vn~~~Al~~~ 615 (760)
+.||||++|+.+|++..
T Consensus 303 ~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 303 GNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp TTTTTCBCCHHHHHTCE
T ss_pred ccCCcCeEeHHHhcccc
Confidence 88999999999999755
|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-48 Score=406.22 Aligned_cols=245 Identities=25% Similarity=0.310 Sum_probs=204.6
Q ss_pred cccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccC
Q 036830 128 LAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCS 205 (760)
Q Consensus 128 ~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~ 205 (760)
|++.+..+.......+|..+ |+||+|||||||||++||+|.+ ++...++|.
T Consensus 6 W~l~~i~~~~~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~ 58 (284)
T 1sh7_A 6 WGLDRIDQRNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGG---------------------------RSVSGYDFV 58 (284)
T ss_dssp HHHHHHTCSSSSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTT---------------------------CEEEEEETT
T ss_pred cChhhcCCcccCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcC---------------------------Ccccccccc
Confidence 34443333333456789877 9999999999999999999973 122333444
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHh-
Q 036830 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIH- 283 (760)
Q Consensus 206 ~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~- 283 (760)
++ ...+.|..+|||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|+++
T Consensus 59 ~~------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~ 118 (284)
T 1sh7_A 59 DN------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQN 118 (284)
T ss_dssp TT------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHH
T ss_pred CC------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhC
Confidence 32 1346788999999999999864 5999999999999998776 788999999999997
Q ss_pred -CCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeC
Q 036830 284 -DGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLG 361 (760)
Q Consensus 284 -~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~ 361 (760)
.+++|||||||.. ....+..+++++.++|++||+||||+|.... ..++..|++|+|||++.+
T Consensus 119 ~~~~~Vin~S~G~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 182 (284)
T 1sh7_A 119 ASGPSVANMSLGGG------QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS---------- 182 (284)
T ss_dssp CCSSEEEEECCCBS------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT----------
T ss_pred CCCCcEEEeCCCCC------CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC----------
Confidence 4799999999987 2467788889999999999999999997543 456778999999986432
Q ss_pred CCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCC
Q 036830 362 NGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPT 441 (760)
Q Consensus 362 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~ 441 (760)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecC
Q 036830 442 ERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVP 521 (760)
Q Consensus 442 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~ 521 (760)
+.++.||++||.. ||+|||++|+++++.
T Consensus 183 --------------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~ 210 (284)
T 1sh7_A 183 --------------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYD 210 (284)
T ss_dssp --------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTT
T ss_pred --------------------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCC
Confidence 4578999999976 999999999999876
Q ss_pred CCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 036830 522 RPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVY 581 (760)
Q Consensus 522 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~ 581 (760)
+.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 211 --------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 211 --------------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp --------------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred --------------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 6899999999999999999999999999999999999999999975
|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-49 Score=425.18 Aligned_cols=299 Identities=21% Similarity=0.283 Sum_probs=221.2
Q ss_pred ccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcc-cCccceecccccCCC--CCCCCC
Q 036830 139 WFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKS-HCNRKLIGARHCSRA--STNKDN 213 (760)
Q Consensus 139 ~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~-~~n~ki~g~~~~~~~--~~~~~~ 213 (760)
++..+|+.+ |+||+||||||||+ +||+|.+.-. ..|+-........+.. ..........++... .....+
T Consensus 20 ~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (340)
T 3lpc_A 20 KADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDP 94 (340)
T ss_dssp CHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTCG
T ss_pred CHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCccccCCccccccCCCccCCccccccccccccccCCCCc
Confidence 377999988 99999999999998 9999975211 1111000000000000 000000000000000 000012
Q ss_pred CCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh----------
Q 036830 214 SGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH---------- 283 (760)
Q Consensus 214 ~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---------- 283 (760)
.....|..||||||||||+|...++. .+.||||+|+|+.+|++...++..++++++|+|+++
T Consensus 95 ~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~~~ 166 (340)
T 3lpc_A 95 RKERSDSSWHGSHVAGTIAAVTNNRI--------GVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENR 166 (340)
T ss_dssp GGSCBCCCCHHHHHHHHHHCCCSSSS--------SCCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCCCS
T ss_pred ccCCCCCCCCHHHHHHHHHccCCCCC--------cceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccccccccc
Confidence 23457889999999999999865432 347999999999999998877889999999999998
Q ss_pred CCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeCC
Q 036830 284 DGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLGN 362 (760)
Q Consensus 284 ~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 362 (760)
.+++|||||||... .....+..+++++.++|++||+||||+|.... ..++..+++|+|||++.+
T Consensus 167 ~~~~Vin~S~G~~~----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------- 231 (340)
T 3lpc_A 167 NPAKVINMSLGSDG----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR----------- 231 (340)
T ss_dssp SCCSEEEECCCEES----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT-----------
T ss_pred CCCeEEEeCcCCCC----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC-----------
Confidence 89999999999873 23556777888999999999999999997643 456778999999986432
Q ss_pred CeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCC
Q 036830 363 GKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442 (760)
Q Consensus 363 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~ 442 (760)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCC
Q 036830 443 RGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPR 522 (760)
Q Consensus 443 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~ 522 (760)
+.++.||++||. |||+|||++|+++++..
T Consensus 232 -------------------------------------------~~~~~~S~~g~~--------~di~ApG~~i~s~~~~~ 260 (340)
T 3lpc_A 232 -------------------------------------------GIRASFSNYGVD--------VDLAAPGQDILSTVDSG 260 (340)
T ss_dssp -------------------------------------------SSBCTTCCBSTT--------CCEEEECSSEEEEEESC
T ss_pred -------------------------------------------CCcCCCCCCCCC--------ceEEecCCCeecccCCC
Confidence 457899999984 59999999999998763
Q ss_pred CCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHh-C---CCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCC
Q 036830 523 PDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSV-R---RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANP 598 (760)
Q Consensus 523 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~ 598 (760)
.. ......|..++|||||||+|||++|||+|+ + |.+++++||++|++||+++. ..++
T Consensus 261 ~~-------~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~------------~~~~ 321 (340)
T 3lpc_A 261 TR-------RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFN------------GRLD 321 (340)
T ss_dssp SS-------SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS------------SCCS
T ss_pred Cc-------CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC------------CCCC
Confidence 21 111256999999999999999999999998 5 99999999999999999752 2356
Q ss_pred CCCCCcccCccccCCCc
Q 036830 599 HEMGAGEINPLKALNPG 615 (760)
Q Consensus 599 ~~~G~G~vn~~~Al~~~ 615 (760)
..||||+||+.+||+..
T Consensus 322 ~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 322 RALGSGIVDAEAAVNSV 338 (340)
T ss_dssp SCCCSSBCCHHHHHHHH
T ss_pred CCcccceecHHHHHHHH
Confidence 68999999999998754
|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=401.73 Aligned_cols=247 Identities=24% Similarity=0.305 Sum_probs=204.1
Q ss_pred cccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccC
Q 036830 128 LAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCS 205 (760)
Q Consensus 128 ~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~ 205 (760)
|++....+.......+|..+ |+||+|+|||||||++||+|.+ ++...++|.
T Consensus 8 W~l~~i~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~---------------------------~~~~~~d~~ 60 (278)
T 2b6n_A 8 WGIDRIDQRNLPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGG---------------------------RASSGYDFI 60 (278)
T ss_dssp HHHHHHTCSSSSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTT---------------------------CEEEEEETT
T ss_pred CCccccCCccCCcchhcccCCCCCCCEEEEEeCCCCCCChhHhc---------------------------ccccCeecC
Confidence 34433333334466789887 9999999999999999999974 122233443
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHh-
Q 036830 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIH- 283 (760)
Q Consensus 206 ~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~- 283 (760)
++ ..++.|..+|||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|+++
T Consensus 61 ~~------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~ 120 (278)
T 2b6n_A 61 DN------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNN 120 (278)
T ss_dssp TT------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHH
T ss_pred CC------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhC
Confidence 32 1345788999999999999863 5999999999999998776 788999999999997
Q ss_pred -CCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeC
Q 036830 284 -DGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLG 361 (760)
Q Consensus 284 -~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~ 361 (760)
.+++|||||||... .+.+..+++++.++|++||+||||+|.... ..++..+++|+|||++.+
T Consensus 121 ~~g~~Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 184 (278)
T 2b6n_A 121 ASGPAVANMSLGGGA------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN---------- 184 (278)
T ss_dssp CCSSEEEEECCCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------
T ss_pred CCCCeEEEECCCCCc------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC----------
Confidence 59999999999872 467778889999999999999999997654 346778999999986432
Q ss_pred CCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCC
Q 036830 362 NGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPT 441 (760)
Q Consensus 362 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~ 441 (760)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecC
Q 036830 442 ERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVP 521 (760)
Q Consensus 442 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~ 521 (760)
+.++.||++||.. ||+|||++|++++..
T Consensus 185 --------------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~ 212 (278)
T 2b6n_A 185 --------------------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYT 212 (278)
T ss_dssp --------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTT
T ss_pred --------------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccC
Confidence 4578999999865 999999999999865
Q ss_pred CCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 036830 522 RPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVY 581 (760)
Q Consensus 522 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~ 581 (760)
.. +.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 213 ~~------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 213 SN------------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp ST------------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred CC------------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 32 6799999999999999999999999999999999999999999864
|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=401.26 Aligned_cols=246 Identities=24% Similarity=0.298 Sum_probs=206.0
Q ss_pred cccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccC
Q 036830 128 LAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCS 205 (760)
Q Consensus 128 ~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~ 205 (760)
|++.+..++..+...+|+.+ |+||+|+|||||||++||+|.+ ++...++|.
T Consensus 8 W~l~~i~~~~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~ 60 (276)
T 4dzt_A 8 WGLDRIDQRDLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGG---------------------------RARVGYDAL 60 (276)
T ss_dssp HHHHHHTSSSSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTT---------------------------CEEEEEETT
T ss_pred CChhhcCCccCCcccceecCCCCCCcEEEEEccCCCCCChhHcc---------------------------CeeccccCC
Confidence 44444333345577889987 9999999999999999999974 122223332
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhC
Q 036830 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHD 284 (760)
Q Consensus 206 ~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~ 284 (760)
. ....|..||||||||||+|.. .||||+|+|+.+|++++.+ ...++++++++|+++.
T Consensus 61 ~--------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~ 118 (276)
T 4dzt_A 61 G--------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRN 118 (276)
T ss_dssp S--------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHH
T ss_pred C--------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhc
Confidence 2 345678999999999999874 5999999999999998776 8899999999999986
Q ss_pred --CCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCc-cCCCCceEEeccccccccceeeEEeC
Q 036830 285 --GVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTV-ANTAPWLFTVAASTIDRDFQSTVLLG 361 (760)
Q Consensus 285 --g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgA~~~~~~~~~~~~~~ 361 (760)
+++|||||||.. ....+..+++++.++|+++|+||||+|...... ++..+++|+|||++.+
T Consensus 119 ~~~~~vin~S~g~~------~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 182 (276)
T 4dzt_A 119 HRRPAVANMSLGGG------VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS---------- 182 (276)
T ss_dssp CCSSEEEEECCCEE------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------
T ss_pred CCCCeEEEECCCCC------CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC----------
Confidence 899999999986 246778888999999999999999999765443 6778999999986432
Q ss_pred CCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCC
Q 036830 362 NGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPT 441 (760)
Q Consensus 362 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~ 441 (760)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecC
Q 036830 442 ERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVP 521 (760)
Q Consensus 442 ~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~ 521 (760)
+.++.||++||.. ||+|||++|++++..
T Consensus 183 --------------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~ 210 (276)
T 4dzt_A 183 --------------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYT 210 (276)
T ss_dssp --------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTT
T ss_pred --------------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccC
Confidence 5678999999976 999999999999876
Q ss_pred CCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccC
Q 036830 522 RPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYD 582 (760)
Q Consensus 522 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~ 582 (760)
.. ..|..++|||||||+|||++|||+|++|++++++||++|++||++..
T Consensus 211 ~~------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 211 SD------------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp SS------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CC------------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 32 57999999999999999999999999999999999999999999763
|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=401.13 Aligned_cols=240 Identities=29% Similarity=0.349 Sum_probs=203.1
Q ss_pred cccccC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCC
Q 036830 142 HKYHKA-ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDP 220 (760)
Q Consensus 142 ~~~~~~-G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~ 220 (760)
..|+.. |+||+|+|||||||++||+|.+ ++...++|. ..+.|.
T Consensus 23 ~~~~~~~G~gv~VaViDsGvd~~H~~l~~---------------------------~~~~~~~~~---------~~~~d~ 66 (279)
T 2pwa_A 23 YYYDESAGQGSCVYVIDTGIEASHPEFEG---------------------------RAQMVKTYY---------YSSRDG 66 (279)
T ss_dssp EECCTTTTTTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEESS---------SCSSCS
T ss_pred ccccCCCCCCCEEEEEeCCCCCCChhHhC---------------------------ccccccCCC---------CCCCCC
Confidence 467656 9999999999999999999974 122233333 125678
Q ss_pred CCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCC-------cEEEec
Q 036830 221 LGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGV-------DIISIS 292 (760)
Q Consensus 221 ~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~-------dVIN~S 292 (760)
.+|||||||||+|+. .||||+|+|+.+|++++.+ +..+++++||+|++++++ +|||||
T Consensus 67 ~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S 132 (279)
T 2pwa_A 67 NGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLS 132 (279)
T ss_dssp SSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEEC
T ss_pred CCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEec
Confidence 999999999999863 5999999999999998877 889999999999999887 999999
Q ss_pred ccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeCCCeeEeeeee
Q 036830 293 IGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAI 371 (760)
Q Consensus 293 lG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~ 371 (760)
||.. ..+.+..+++++.++|++||+||||+|.... ..++..|++|+|||++.+
T Consensus 133 ~G~~------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------------- 186 (279)
T 2pwa_A 133 LGGG------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY-------------------- 186 (279)
T ss_dssp CCEE------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------------
T ss_pred CCCC------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC--------------------
Confidence 9976 3467788889999999999999999997643 356778999999986432
Q ss_pred ecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEe
Q 036830 372 SLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEV 451 (760)
Q Consensus 372 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i 451 (760)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCC
Q 036830 452 GKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPA 531 (760)
Q Consensus 452 ~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~ 531 (760)
+.++.||++||.+ ||+|||++|+++++.
T Consensus 187 ----------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~---------- 214 (279)
T 2pwa_A 187 ----------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIG---------- 214 (279)
T ss_dssp ----------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETT----------
T ss_pred ----------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeecC----------
Confidence 4578999999965 999999999999976
Q ss_pred CCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCcc
Q 036830 532 GEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPL 609 (760)
Q Consensus 532 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~ 609 (760)
+.|..++|||||||||||++|||+|+ |++++++||++|++||++.. ...+|+|..|+.
T Consensus 215 ----~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~---------------~~~~~~g~~n~l 272 (279)
T 2pwa_A 215 ----GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD---------------LSNIPFGTVNLL 272 (279)
T ss_dssp ----TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC---------------CBSCCTTSCCEE
T ss_pred ----CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc---------------cCCCCCCCccEe
Confidence 68999999999999999999999999 99999999999999999642 123677877763
|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-47 Score=426.21 Aligned_cols=297 Identities=13% Similarity=0.129 Sum_probs=220.0
Q ss_pred ccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCC
Q 036830 137 NTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNS 214 (760)
Q Consensus 137 ~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~ 214 (760)
.+++..+|+.+ |+||+|||||||||++||+|.+.- . ....++|.++.....+.
T Consensus 24 ~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------~-------------~~~~~d~~~~~~~p~~~ 78 (471)
T 1p8j_A 24 DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------D-------------PGASFDVNDQDPDPQPR 78 (471)
T ss_dssp SCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------C-------------GGGCEETTTTBSCCCCC
T ss_pred CCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------C-------------ccCcccccCCCCCCCCc
Confidence 35588999987 999999999999999999997410 0 00122333221110111
Q ss_pred CCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh-CCCcEEEecc
Q 036830 215 GSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH-DGVDIISISI 293 (760)
Q Consensus 215 ~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~Sl 293 (760)
..+.|..+|||||||||||...++ ..+.||||+|+|+.+|+++ +..+++++|++++++ ++++||||||
T Consensus 79 ~~~~d~~gHGT~vAGiiaa~~~n~--------~g~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~ 147 (471)
T 1p8j_A 79 YTQMNDNRHGTRCAGEVAAVANNG--------VCGVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASW 147 (471)
T ss_dssp CCTTCTTCHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECC
T ss_pred cCCCCCCCcHHHHHHHHHeeccCC--------CCCEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEecc
Confidence 245678999999999999976432 2347999999999999985 346689999999999 9999999999
Q ss_pred cCCCCCC--CCCCcHHHHHHHHHH-----hCCcEEEEecCCCCCCCCC----ccCCCCceEEeccccccccceeeEEeCC
Q 036830 294 GLSNSEA--DYMNDPIAIGALHAQ-----QRGVVVICSAGNDGPYPFT----VANTAPWLFTVAASTIDRDFQSTVLLGN 362 (760)
Q Consensus 294 G~~~~~~--~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgA~~~~~~~~~~~~~~~ 362 (760)
|...... ......+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 148 G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~----------- 216 (471)
T 1p8j_A 148 GPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF----------- 216 (471)
T ss_dssp BSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-----------
T ss_pred CcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-----------
Confidence 9864110 112233445555554 3799999999999965322 12345899999986532
Q ss_pred CeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCC
Q 036830 363 GKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTE 442 (760)
Q Consensus 363 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~ 442 (760)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCC
Q 036830 443 RGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPR 522 (760)
Q Consensus 443 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~ 522 (760)
+.++.||++||.. ....+|+..+||.+|+++....
T Consensus 217 -------------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st~~~~ 251 (471)
T 1p8j_A 217 -------------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQIVTTDLRQ 251 (471)
T ss_dssp -------------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCEEEEETTT
T ss_pred -------------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCEEEeeCCC
Confidence 4578999999987 4556677777788999997641
Q ss_pred CCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCC
Q 036830 523 PDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMG 602 (760)
Q Consensus 523 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G 602 (760)
..|..++|||||||||||++|||+|++|+|++++||++|++||++++.....+.........+..||
T Consensus 252 -------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G 318 (471)
T 1p8j_A 252 -------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYG 318 (471)
T ss_dssp -------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTB
T ss_pred -------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCC
Confidence 5689999999999999999999999999999999999999999987644333332222233567899
Q ss_pred CcccCccccCCCceee
Q 036830 603 AGEINPLKALNPGLVF 618 (760)
Q Consensus 603 ~G~vn~~~Al~~~l~~ 618 (760)
||+||+.+|++.+..+
T Consensus 319 ~G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 319 YGLLDAGAMVALAQNW 334 (471)
T ss_dssp TCBCCHHHHHHHHHTC
T ss_pred CEEEcHhHHHHHhhcc
Confidence 9999999999865444
|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-46 Score=422.08 Aligned_cols=288 Identities=15% Similarity=0.156 Sum_probs=217.5
Q ss_pred cccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCC
Q 036830 138 TWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSG 215 (760)
Q Consensus 138 ~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~ 215 (760)
+++..+|+.+ |+||+|||||||||++||+|.+.- + ..+.++|.++.. ...
T Consensus 41 i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~~~---~~~ 92 (503)
T 2id4_A 41 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDNTN---LPK 92 (503)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTTBS---CCC
T ss_pred cChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCCCC---CCC
Confidence 5578999987 999999999999999999997420 0 012233433211 112
Q ss_pred CCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccC
Q 036830 216 SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGL 295 (760)
Q Consensus 216 ~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~ 295 (760)
...|..||||||||||||...++ ..+.||||+|+|+.+|+++.. +...++++||+|+++.+ +|||||||.
T Consensus 93 p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~ 162 (503)
T 2id4_A 93 PRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGP 162 (503)
T ss_dssp CCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEES
T ss_pred CCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCc
Confidence 23578899999999999976432 224799999999999999743 67889999999999998 999999998
Q ss_pred CCCC--CCCCCcHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--Ccc--CCCCceEEeccccccccceeeEEeCCCe
Q 036830 296 SNSE--ADYMNDPIAIGALHAQ-----QRGVVVICSAGNDGPYPF--TVA--NTAPWLFTVAASTIDRDFQSTVLLGNGK 364 (760)
Q Consensus 296 ~~~~--~~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~--~~~p~vitVgA~~~~~~~~~~~~~~~~~ 364 (760)
.... .......+..++.++. .+|++||+||||+|.... .++ ..++++|+|||++.+
T Consensus 163 ~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~------------- 229 (503)
T 2id4_A 163 ADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK------------- 229 (503)
T ss_dssp CCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT-------------
T ss_pred CCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC-------------
Confidence 7411 1112344566666665 479999999999996533 222 245789999986432
Q ss_pred eEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCc
Q 036830 365 AIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERG 444 (760)
Q Consensus 365 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~ 444 (760)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceee----CCceEEeeec
Q 036830 445 ILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAA----PGVAVLAAIV 520 (760)
Q Consensus 445 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A----PG~~I~Sa~~ 520 (760)
+.++.||++||.. |++| ||..|+++..
T Consensus 230 -----------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~ 260 (503)
T 2id4_A 230 -----------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDI 260 (503)
T ss_dssp -----------------------------------------SCCCTTCCCCTTE--------EEEEECSBTTBCEEEECS
T ss_pred -----------------------------------------CCcCCcCCCCCcc--------eEeecCCCCCCceEeecC
Confidence 4568999999987 8887 8999999954
Q ss_pred CCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCC-CCCcCCCCCCCCCCC
Q 036830 521 PRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNT-GTPLTNSSGNNANPH 599 (760)
Q Consensus 521 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~-g~p~~~~~~~~~~~~ 599 (760)
.. ..|..++|||||||||||++|||+|++|+|++++||++|++||++++.. ...+.........+.
T Consensus 261 ~~-------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~ 327 (503)
T 2id4_A 261 NG-------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSH 327 (503)
T ss_dssp TT-------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBT
T ss_pred CC-------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCc
Confidence 31 6799999999999999999999999999999999999999999987543 111221112233467
Q ss_pred CCCCcccCccccCCCceee
Q 036830 600 EMGAGEINPLKALNPGLVF 618 (760)
Q Consensus 600 ~~G~G~vn~~~Al~~~l~~ 618 (760)
.||||+||+++|++.+..+
T Consensus 328 ~~G~G~vda~~Av~~a~~~ 346 (503)
T 2id4_A 328 RYGFGKIDAHKLIEMSKTW 346 (503)
T ss_dssp TTBTCBCCHHHHHHHHTSC
T ss_pred ccCCcEecHHHHHHHHhcc
Confidence 8999999999999865544
|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-46 Score=414.42 Aligned_cols=275 Identities=18% Similarity=0.183 Sum_probs=200.5
Q ss_pred ccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCC
Q 036830 143 KYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDP 220 (760)
Q Consensus 143 ~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~ 220 (760)
.|..+ |+||+|+|||||||++||+|.+.- + ...+.+..+.+.......+.|.
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------~-------------------~~~~~~v~~~dg~~f~~~~~D~ 71 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------M-------------------VTDFENVPEEDGTRFHRQASKC 71 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE-------E-------------------EEEEECCCCCC-------CTTT
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc-------c-------------------ccCcccccCCCCccccCCCCCC
Confidence 67665 999999999999999999997420 0 0000111000000001345678
Q ss_pred CCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHh------CCCcEEEecc
Q 036830 221 LGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIH------DGVDIISISI 293 (760)
Q Consensus 221 ~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~------~g~dVIN~Sl 293 (760)
.||||||||||+|+. .||||+|+|+.+|++++.+ ++.+++++||+|+++ .+++||||||
T Consensus 72 ~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSl 137 (546)
T 2qtw_B 72 DSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPL 137 (546)
T ss_dssp THHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECE
T ss_pred CChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecC
Confidence 999999999999874 5999999999999998877 788999999999997 4899999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeee
Q 036830 294 GLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372 (760)
Q Consensus 294 G~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 372 (760)
|+. ....+..+++++.++|++||+||||+|.+.. ..++..|++|+|||++.+...
T Consensus 138 Gg~------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------------ 193 (546)
T 2qtw_B 138 AGG------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------------ 193 (546)
T ss_dssp EEE------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB------------------
T ss_pred CCC------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc------------------
Confidence 976 3467788889999999999999999997643 346788999999997543100
Q ss_pred cccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEec
Q 036830 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452 (760)
Q Consensus 373 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~ 452 (760)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCC
Q 036830 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~ 532 (760)
...-..||++|+. |||+|||++|+++++...
T Consensus 194 --------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~--------- 224 (546)
T 2qtw_B 194 --------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS--------- 224 (546)
T ss_dssp --------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECTTST---------
T ss_pred --------------------------------ccccCCcCCCCCc--------ceEEecCccEEeeccCCC---------
Confidence 0000128999984 499999999999987532
Q ss_pred CCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCc-------CCC--CCCCCCCCCCCC
Q 036830 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPL-------TNS--SGNNANPHEMGA 603 (760)
Q Consensus 533 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~-------~~~--~~~~~~~~~~G~ 603 (760)
..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.......+ ..+ -........+|+
T Consensus 225 ---~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~ 301 (546)
T 2qtw_B 225 ---TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGW 301 (546)
T ss_dssp ---TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--C
T ss_pred ---CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccCC
Confidence 57999999999999999999999999999999999999999998643211100 001 011224566788
Q ss_pred cc--cCccccCC
Q 036830 604 GE--INPLKALN 613 (760)
Q Consensus 604 G~--vn~~~Al~ 613 (760)
|+ .++..+..
T Consensus 302 ~l~~~~~w~a~s 313 (546)
T 2qtw_B 302 QLFCRTVWSAHS 313 (546)
T ss_dssp CCEEEEEECCCC
T ss_pred CcchhchhccCC
Confidence 88 77766664
|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=389.90 Aligned_cols=229 Identities=27% Similarity=0.361 Sum_probs=197.0
Q ss_pred cccccccC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSR 218 (760)
Q Consensus 140 ~~~~~~~~-G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 218 (760)
...+|+.. |+||+|||||||||++||+|.+ ++...++|..+ ..
T Consensus 22 ~~~~~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~---------~~ 65 (279)
T 3f7m_A 22 TAYAYDTSAGAGACVYVIDTGVEDTHPDFEG---------------------------RAKQIKSYAST---------AR 65 (279)
T ss_dssp CSEEECTTTTTTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEECSSS---------SS
T ss_pred cceeecCCCCCCCEEEEEcCCCCCCChhhcc---------------------------ccccccCCCCC---------CC
Confidence 34688888 9999999999999999999974 22233333322 23
Q ss_pred CCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCC-------CcEEE
Q 036830 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDG-------VDIIS 290 (760)
Q Consensus 219 d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g-------~dVIN 290 (760)
|..||||||||||+|+. .||||+|+|+.+|++++.+ +..++++++++|+++++ ++|||
T Consensus 66 d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin 131 (279)
T 3f7m_A 66 DGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVAS 131 (279)
T ss_dssp CSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEE
T ss_pred CCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEE
Confidence 78999999999999864 5999999999999998876 88999999999999876 89999
Q ss_pred ecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC-ccCCCCceEEeccccccccceeeEEeCCCeeEeee
Q 036830 291 ISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT-VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGT 369 (760)
Q Consensus 291 ~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~ 369 (760)
||||.. ..+.+..++.++.++|++||+||||+|..... .++..+++|+|||++.+
T Consensus 132 ~S~g~~------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------ 187 (279)
T 3f7m_A 132 MSLGGG------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN------------------ 187 (279)
T ss_dssp ECCCEE------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------------
T ss_pred eCCCcC------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC------------------
Confidence 999976 45778888899999999999999999976543 36778999999986432
Q ss_pred eeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceE
Q 036830 370 AISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYA 449 (760)
Q Consensus 370 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~ 449 (760)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCC
Q 036830 450 EVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGI 529 (760)
Q Consensus 450 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~ 529 (760)
+.++.||++||.. ||+|||++|+++++.
T Consensus 188 ------------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~~-------- 215 (279)
T 3f7m_A 188 ------------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWIG-------- 215 (279)
T ss_dssp ------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECGG--------
T ss_pred ------------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecCC--------
Confidence 5578999999965 999999999999876
Q ss_pred CCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 036830 530 PAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVY 581 (760)
Q Consensus 530 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~ 581 (760)
+.|..++|||||||+|||++|||+|++|. ++++||++|++||++.
T Consensus 216 ------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 216 ------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp ------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred ------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 77999999999999999999999999999 9999999999999975
|
| >3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=421.30 Aligned_cols=302 Identities=19% Similarity=0.194 Sum_probs=204.6
Q ss_pred cccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCC
Q 036830 138 TWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSG 215 (760)
Q Consensus 138 ~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~ 215 (760)
+++..+|+.+ |+||+|||||||||++||||.+. ...+.++|.++.. +..
T Consensus 57 inv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n--------------------------~~~~~~~~~~~~~---dp~ 107 (600)
T 3hjr_A 57 LNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN--------------------------VRPGSKNVVTGSD---DPT 107 (600)
T ss_dssp CCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG--------------------------BCSCCBCTTTSSS---CCC
T ss_pred cCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc--------------------------cccCcceeecCCC---CCC
Confidence 5577899998 99999999999999999999741 1112233333221 112
Q ss_pred CCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHH-HHHHhCCCcEEEecc
Q 036830 216 SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAI-DDAIHDGVDIISISI 293 (760)
Q Consensus 216 ~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~dVIN~Sl 293 (760)
+..|.++|||||||||||.. + +..+.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|||+||
T Consensus 108 p~~~~~gHGThVAGiIAa~~-n--------~~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~ 178 (600)
T 3hjr_A 108 PTDPDTAHGTSVSGIIAAVD-N--------AIGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSY 178 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCCS-S--------SSSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECC
T ss_pred CCCCCCChHHHHHHHHhEeC-C--------CCCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEeccc
Confidence 33457899999999999864 1 12347999999999999998776 6777777776 667788999999999
Q ss_pred cCCCCCCCCCCcH----HHHHHHH--HHhCCcEEEEecCCCCCCCCCc----------------------cCCCCceEEe
Q 036830 294 GLSNSEADYMNDP----IAIGALH--AQQRGVVVICSAGNDGPYPFTV----------------------ANTAPWLFTV 345 (760)
Q Consensus 294 G~~~~~~~~~~~~----~~~a~~~--a~~~Gi~vV~AAGN~G~~~~~~----------------------~~~~p~vitV 345 (760)
|............ +..++.. ...+|+++|+||||.+...... ....+++|+|
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsV 258 (600)
T 3hjr_A 179 GMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVV 258 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEE
T ss_pred CccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEE
Confidence 9764211112221 2222222 2368999999999976321100 0111222222
Q ss_pred ccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcC
Q 036830 346 AASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVE 425 (760)
Q Consensus 346 gA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~G 425 (760)
||+
T Consensus 259 gA~----------------------------------------------------------------------------- 261 (600)
T 3hjr_A 259 SAL----------------------------------------------------------------------------- 261 (600)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred eee-----------------------------------------------------------------------------
Confidence 221
Q ss_pred ceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCccc
Q 036830 426 AQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILK 505 (760)
Q Consensus 426 a~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~K 505 (760)
...+.++.||++|+..
T Consensus 262 ---------------------------------------------------------~~~g~~a~yS~~G~~v------- 277 (600)
T 3hjr_A 262 ---------------------------------------------------------NADGVRSSYSSVGSNI------- 277 (600)
T ss_dssp ---------------------------------------------------------CTTSSBCTTCCBCTTC-------
T ss_pred ---------------------------------------------------------cCCCCEeecccCCcce-------
Confidence 1236788999999987
Q ss_pred CceeeCCceE--------EeeecCCCCC------------CCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCC
Q 036830 506 PDVAAPGVAV--------LAAIVPRPDR------------PGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKW 565 (760)
Q Consensus 506 PDI~APG~~I--------~Sa~~~~~~~------------~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~l 565 (760)
+++|||.++ .+..++.... ............|..++|||||||||||++|||+|+||+|
T Consensus 278 -~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~l 356 (600)
T 3hjr_A 278 -FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDL 356 (600)
T ss_dssp -CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTS
T ss_pred -eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCC
Confidence 899998752 2222221100 0001112233568899999999999999999999999999
Q ss_pred CHHHHHHHHHhcccccCCCCCCcC--------------------CCCCCCCCCCCCCCcccCccccCCCceeee
Q 036830 566 TYSMIKSALMTTATVYDNTGTPLT--------------------NSSGNNANPHEMGAGEINPLKALNPGLVFK 619 (760)
Q Consensus 566 s~~~ik~~L~~TA~~~~~~g~p~~--------------------~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~ 619 (760)
+++|||++|++||++++....|+. .+.........||+|+||+.+|++.+..+.
T Consensus 357 t~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A~~w~ 430 (600)
T 3hjr_A 357 SVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp CHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHhhcCc
Confidence 999999999999999987665532 111223346679999999999998654443
|
| >1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-25 Score=253.65 Aligned_cols=98 Identities=27% Similarity=0.382 Sum_probs=78.8
Q ss_pred cccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh---CCCcEEEecccCCCCCCCC---CCcHHHHHHHHHHhCCcEE
Q 036830 248 TARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH---DGVDIISISIGLSNSEADY---MNDPIAIGALHAQQRGVVV 321 (760)
Q Consensus 248 ~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIN~SlG~~~~~~~~---~~~~~~~a~~~a~~~Gi~v 321 (760)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||+|||... ..+ ....++.++.+|..+||+|
T Consensus 273 ~~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e--~~~~~~~~~~~~~~~~~a~~~Gi~v 346 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPE--DSWAPASIAAMNRAFLDAAALGVTV 346 (552)
T ss_dssp HHHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEG--GGSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred hhhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCc--ccCCHHHHHHHHHHHHHHHhCCeEE
Confidence 34799999999999984 246789999999998 79999999999873 211 1245677778888999999
Q ss_pred EEecCCCCCCC--------CCccCCCCceEEecccccc
Q 036830 322 ICSAGNDGPYP--------FTVANTAPWLFTVAASTID 351 (760)
Q Consensus 322 V~AAGN~G~~~--------~~~~~~~p~vitVgA~~~~ 351 (760)
|+||||+|... ..+++.+|+|++||+++..
T Consensus 347 v~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 347 LAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EEecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 99999999643 3456788999999998653
|
| >1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.5e-22 Score=213.75 Aligned_cols=102 Identities=17% Similarity=0.255 Sum_probs=81.3
Q ss_pred cccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh-CCCcEEEecccCCCC--CCCCCCcHHHHHHHHHHhCCcEEEEecC
Q 036830 250 RGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH-DGVDIISISIGLSNS--EADYMNDPIAIGALHAQQRGVVVICSAG 326 (760)
Q Consensus 250 ~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~SlG~~~~--~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 326 (760)
..+||+++++.|++.+..++..++++++|+|+++ ++++|||||||.... ....+.+.+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 3578999999999986655677899999999997 899999999998730 0112235677778888899999999999
Q ss_pred CCCCCCC-------------CccCCCCceEEecccccc
Q 036830 327 NDGPYPF-------------TVANTAPWLFTVAASTID 351 (760)
Q Consensus 327 N~G~~~~-------------~~~~~~p~vitVgA~~~~ 351 (760)
|+|...+ ..++..|+|++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9996532 345778999999998754
|
| >3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.7e-10 Score=125.03 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=64.8
Q ss_pred cccCCCCeEEEEEeccCCCCCHHHHHHHHHHHH--hCCCcEEEecccCCCCCCCC---CCcHHHHHHHHHHhCCcEEEEe
Q 036830 250 RGGSPFSRIASYKACKEGGCSGAAILQAIDDAI--HDGVDIISISIGLSNSEADY---MNDPIAIGALHAQQRGVVVICS 324 (760)
Q Consensus 250 ~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~--~~g~dVIN~SlG~~~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 324 (760)
.+++++..++.|...... ...+.+++.+++.. .+-++|||+|||... ... +.+.+..++..+..+||.|++|
T Consensus 262 ~a~~~~i~~~~~~~~g~~-~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e--~~~~~~y~~~~~~~~~~~~~~Gitv~~A 338 (544)
T 3edy_A 262 MSAGANISTWVYSSPGRH-EGQEPFLQWLMLLSNESALPHVHTVSYGDDE--DSLSSAYIQRVNTELMKAAARGLTLLFA 338 (544)
T ss_dssp HHHSTTSEEEEECCCSCC-TTCCHHHHHHHHHTTCSSCCSEEEEECCEEG--GGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hccCCCceEEEEecCCcc-cccccHHHHHHHHhccCCCCcEEEecCCCcc--cccCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 455666666666443211 12233444444443 345789999999984 211 1244566677888999999999
Q ss_pred cCCCCCCC----------CCccCCCCceEEecccccc
Q 036830 325 AGNDGPYP----------FTVANTAPWLFTVAASTID 351 (760)
Q Consensus 325 AGN~G~~~----------~~~~~~~p~vitVgA~~~~ 351 (760)
+||+|... ...++..|||++||+++..
T Consensus 339 SGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l~ 375 (544)
T 3edy_A 339 SGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQ 375 (544)
T ss_dssp CCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEES
T ss_pred cCCCCccccCCCCCccccCCCcCCCCcEEEEeeeecc
Confidence 99999642 2456788999999998753
|
| >2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P | Back alignment and structure |
|---|
Probab=98.96 E-value=5.3e-10 Score=99.82 Aligned_cols=79 Identities=13% Similarity=0.164 Sum_probs=66.5
Q ss_pred CCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHhcCCCCe
Q 036830 29 EIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHV 108 (760)
Q Consensus 29 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V 108 (760)
..+++|||+|++.... .....|.+|+.+++.+ .....++.++|++.|+||+++++++++++|+++|+|
T Consensus 35 ~ip~~YIV~lk~~~~~-----------~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V 102 (114)
T 2w2n_P 35 RLPGTYVVVLKEETHL-----------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHV 102 (114)
T ss_dssp EEEEEEEEEECTTCCH-----------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTE
T ss_pred CCCCcEEEEECCCCCH-----------HHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCc
Confidence 4678999999987643 2566888999887755 224568999999999999999999999999999999
Q ss_pred EEEEeCccccc
Q 036830 109 VSVFPDPVLQL 119 (760)
Q Consensus 109 ~~V~~~~~~~~ 119 (760)
.+|++++.++.
T Consensus 103 ~~VE~D~~v~~ 113 (114)
T 2w2n_P 103 DYIEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEEEE
T ss_pred cEEEeCceEec
Confidence 99999998764
|
| >3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-08 Score=84.58 Aligned_cols=75 Identities=21% Similarity=0.196 Sum_probs=57.5
Q ss_pred CCCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHhcCCCC
Q 036830 28 NEIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDH 107 (760)
Q Consensus 28 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~ 107 (760)
...+++|||.||+.... . . .+.++++. ...++.++|++ |+||+++++++++++|+++|+
T Consensus 5 ~~i~~~YIV~~k~~~~~----------~-~--~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~ 63 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKS----------C-A--KKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPS 63 (80)
T ss_dssp ---CCEEEEEECTTCCS----------H-H--HHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTT
T ss_pred ccCCCCEEEEECCCCCh----------H-H--HHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCC
Confidence 44679999999988654 1 1 12233332 23579999998 999999999999999999999
Q ss_pred eEEEEeCcccccccCC
Q 036830 108 VVSVFPDPVLQLHTTR 123 (760)
Q Consensus 108 V~~V~~~~~~~~~~~~ 123 (760)
|.+|||++.++++++.
T Consensus 64 V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 64 VAYVEEDKLYRALSAT 79 (80)
T ss_dssp EEEEEECCEEEECCC-
T ss_pred ccEEEeCcEEEEeeec
Confidence 9999999999887654
|
| >2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P | Back alignment and structure |
|---|
Probab=98.65 E-value=2.3e-08 Score=90.19 Aligned_cols=79 Identities=13% Similarity=0.164 Sum_probs=61.7
Q ss_pred CCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHhcCCCCe
Q 036830 29 EIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHV 108 (760)
Q Consensus 29 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V 108 (760)
..+++|||.||+.... .....|.+++.++.++. ....++.++|++.|+||+++++++++++|+++|+|
T Consensus 45 ~Ip~~YIV~~K~~~~~-----------~~~~~~~~~l~~~~~~r-~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V 112 (124)
T 2qtw_A 45 RLPGTYVVVLKEETHL-----------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHV 112 (124)
T ss_dssp EEEEEEEEEECTTCCH-----------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTE
T ss_pred CCCCCEEEEECCCCCH-----------HHHHHHHHHHHHHHhhc-ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCC
Confidence 4778999999988653 23455666665543210 02357999999999999999999999999999999
Q ss_pred EEEEeCccccc
Q 036830 109 VSVFPDPVLQL 119 (760)
Q Consensus 109 ~~V~~~~~~~~ 119 (760)
.+|++++.++.
T Consensus 113 ~~VE~D~~v~a 123 (124)
T 2qtw_A 113 DYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEEEE
T ss_pred cEEEeCceEec
Confidence 99999998764
|
| >1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.8e-07 Score=76.98 Aligned_cols=70 Identities=19% Similarity=0.205 Sum_probs=58.3
Q ss_pred CcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEec-cceeeEEEEeCHHHHHHhcCC--CCe
Q 036830 32 KPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYK-HAFKGFSAILTDSEASALSGH--DHV 108 (760)
Q Consensus 32 ~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~-~~~~g~s~~l~~~~i~~L~~~--p~V 108 (760)
+.|||.||+.... ...+.|.+++.... ..+.+.|+ ..|+||+++++++.+++|+++ |.|
T Consensus 3 ~sYIV~lk~~~~~-----------~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V 64 (76)
T 1v5i_B 3 GKFIVIFKNDVSE-----------DKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLI 64 (76)
T ss_dssp EEEEEEECTTCCH-----------HHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTE
T ss_pred ceEEEEECCCCCH-----------HHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCC
Confidence 6899999998653 35667777777653 35789994 889999999999999999999 899
Q ss_pred EEEEeCccccc
Q 036830 109 VSVFPDPVLQL 119 (760)
Q Consensus 109 ~~V~~~~~~~~ 119 (760)
.+||+++.++.
T Consensus 65 ~~VE~D~~v~~ 75 (76)
T 1v5i_B 65 DSIEEDHVAHA 75 (76)
T ss_dssp EEEEECCEEEC
T ss_pred cEEcCCcEEeC
Confidence 99999998754
|
| >2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00026 Score=55.89 Aligned_cols=43 Identities=12% Similarity=-0.011 Sum_probs=38.9
Q ss_pred cccceEEEeccceeeEEEEeCHHHHHHhcCCCCeEEEEeCcccc
Q 036830 75 ERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVSVFPDPVLQ 118 (760)
Q Consensus 75 ~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V~~V~~~~~~~ 118 (760)
...++.++|.. +++++++++++.++.|+++|+|.+|++|...+
T Consensus 21 ~gG~i~~~~~~-I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 21 IGGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GTCEEEEECSS-SSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred CCCEEEEEecC-CcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 45789999965 99999999999999999999999999998764
|
| >3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.012 Score=56.85 Aligned_cols=61 Identities=20% Similarity=0.126 Sum_probs=49.7
Q ss_pred hhhhhhhcCceEEEEEcCCCC-CC----C-CCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCc
Q 036830 417 KIAVAENVEAQGLIFINDDEK-IW----P-TERGILPYAEVGKVAGFRIINYINSNKNPTATILPTV 477 (760)
Q Consensus 417 k~~~~~~~Ga~~~i~~~~~~~-~~----~-~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 477 (760)
|+.+++++||.++|+||+... .. . .....||+++|+..+|+.|+++++++...+++|....
T Consensus 121 Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 121 KIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp HHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 899999999999999998522 11 1 1225799999999999999999999988888777653
|
| >2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.022 Score=50.89 Aligned_cols=83 Identities=18% Similarity=0.224 Sum_probs=59.2
Q ss_pred CcCCCcEEEeecccCceeEEEEEEEEecCCCCeEEEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEEecCCCCceE
Q 036830 660 NINYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNY 739 (760)
Q Consensus 660 ~ln~ps~~~~~~~~~~~~~t~~rtv~N~~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 739 (760)
.|+++...+.. +.+.+++++|+|+.+..|+.....| ++++|....+ ++|++..++|+|.+. ..+.+.
T Consensus 31 ~l~fg~~~v~~------~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~--~~g~~~ 97 (122)
T 2ys4_A 31 KLNFSTCPVKY------STQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQ--SVGDHS 97 (122)
T ss_dssp EECCCSEESSS------CEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCS--SSBCCC
T ss_pred eeecCCeecCC------eEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcC--CCccEE
Confidence 45555554432 5667889999999999998887554 7889999999 689999999999763 344456
Q ss_pred EEEEEE-CCceEEEEEE
Q 036830 740 GSITWS-DDRHSVRMMF 755 (760)
Q Consensus 740 G~~~~~-~~~~~v~~P~ 755 (760)
+.|... ++...+.+++
T Consensus 98 ~~l~v~~~~g~~~~v~L 114 (122)
T 2ys4_A 98 GRLIVCYDTGEKVFVSL 114 (122)
T ss_dssp CBCEEEESSSCEECCEE
T ss_pred EEEEEEECCCCEEEEEE
Confidence 666644 4545555544
|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=87.66 E-value=0.32 Score=59.69 Aligned_cols=21 Identities=24% Similarity=0.634 Sum_probs=20.2
Q ss_pred CCCeEEEEEeCCCCCCCCCCC
Q 036830 148 ASDIVIGVIDTGIWPESPSFN 168 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~ 168 (760)
|+||+|||+|||||+.+|.|.
T Consensus 35 Grgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 35 GRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp STTCEEEEEESCCCTTSTTSS
T ss_pred CCccEEEEEeCCCCCCCCcce
Confidence 999999999999999999985
|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
Probab=82.94 E-value=7.9 Score=42.21 Aligned_cols=281 Identities=19% Similarity=0.258 Sum_probs=169.0
Q ss_pred CCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC
Q 036830 255 FSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT 334 (760)
Q Consensus 255 ~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~ 334 (760)
+++|+.+..... .....+.+++++|.+.|+-|| .|-|... ...... -+...+++.|.|..+++.. ..
T Consensus 122 g~~Vin~S~G~~--~~~~~~~~ai~~a~~~gv~vV-~AAGN~g--~~~~~~-------Pa~~~~vi~VgA~~~~~~~-~~ 188 (441)
T 1y9z_A 122 GANVVTMSLGGS--GSTTTERNALNTHYNNGVLLI-AAAGNAG--DSSYSY-------PASYDSVMSVAAVDSNLDH-AA 188 (441)
T ss_dssp CCSEEEECCCBS--CCBHHHHHHHHHHHHTTCEEE-EECCSSS--SSBCCB-------TTTSTTEEEEEEECTTCCB-CT
T ss_pred CCcEEEeCCCCC--CCCHHHHHHHHHHHHCCCEEE-EecCCCC--CCCCCC-------CCCCCCeEEEEEECCCCCC-Cc
Confidence 678877665432 234567789999999986544 6777764 111111 1334688888888777632 22
Q ss_pred ccCCCCceEEeccccccccceeeEEeCCCe----eEeeeeeecccCCCC-ceee--eEecccccccccccccccccccC-
Q 036830 335 VANTAPWLFTVAASTIDRDFQSTVLLGNGK----AIKGTAISLSNLSRS-KTYP--LAYGKAIAVNSTLVSQASQCLYT- 406 (760)
Q Consensus 335 ~~~~~p~vitVgA~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~-~~~p--~~~~~~~~~~~~~~~~~~~c~~~- 406 (760)
+++..++ +.|.|.- ..+......+++. ++.|.++......+. ..++ ..|..... ..........|...
T Consensus 189 ~S~~g~~-vdv~ApG--~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~ 264 (441)
T 1y9z_A 189 FSQYTDQ-VEISGPG--EAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNG 264 (441)
T ss_dssp TSCCCTT-EEEEEEC--SSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEET
T ss_pred cccCCCc-eEEEecc--CCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhcccccc
Confidence 2222232 2222211 1111222222222 223333321110000 0000 00100000 00011123346643
Q ss_pred -CCCCccccch------------------hhhhhhhcCceEEEEEcCCCCCC--------CCCCcccceEEechhhHHHH
Q 036830 407 -TLYPMDTRGR------------------KIAVAENVEAQGLIFINDDEKIW--------PTERGILPYAEVGKVAGFRI 459 (760)
Q Consensus 407 -~~~~~~~~Gk------------------k~~~~~~~Ga~~~i~~~~~~~~~--------~~~~~~~p~~~i~~~~g~~l 459 (760)
.++..+++|| |..+++++|+.++|++|+..... ......+|.+.++..+|+.|
T Consensus 265 ~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l 344 (441)
T 1y9z_A 265 TSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLAL 344 (441)
T ss_dssp TEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHH
T ss_pred ccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHH
Confidence 3344555554 56789999999999998764321 12236799999999999999
Q ss_pred HHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCcce
Q 036830 460 INYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYA 539 (760)
Q Consensus 460 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~y~ 539 (760)
+.|+... + .+ ++... +.|.
T Consensus 345 ~~~~~~~----~-----------------------------------t~--------~~~~~--------------~~y~ 363 (441)
T 1y9z_A 345 KAKLGQS----T-----------------------------------TV--------SNQGN--------------QDYE 363 (441)
T ss_dssp HTTTTSE----E-----------------------------------EE--------EEEEE--------------ESEE
T ss_pred HHHhcCC----c-----------------------------------cc--------ccccC--------------CCce
Confidence 9876421 0 11 11122 6799
Q ss_pred eeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCceeee
Q 036830 540 LRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFK 619 (760)
Q Consensus 540 ~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~ 619 (760)
.+||||||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+
T Consensus 364 ~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~------- 425 (441)
T 1y9z_A 364 YYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK------- 425 (441)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHH-------
T ss_pred eecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC-----------CcccccccccCHHHHH-------
Confidence 9999999999999999999999999999999999999999875432 4567999999999994
Q ss_pred cChhhHHhhhhhcCCC
Q 036830 620 TTIKDYLRFLCYYGYS 635 (760)
Q Consensus 620 ~~~~~~~~~~~~~g~~ 635 (760)
||+.|||+.++.
T Consensus 426 ----~~~~~lc~~~~~ 437 (441)
T 1y9z_A 426 ----AYLDESCTGPTD 437 (441)
T ss_dssp ----HHHHHCTTCC--
T ss_pred ----HHHHhhhcCCCC
Confidence 699999999864
|
| >2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.79 E-value=2.4 Score=36.46 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=52.6
Q ss_pred cCCCcEEEeecccCceeEEEEEEEEecCCCCeEEEEEEeC-CCCcEEEEecceeEEeeCceEEEEEEEEEEecCCCCceE
Q 036830 661 INYPSISISKLARQGAIRTVKRTVTNVGSPNATYISMVNA-PSGLAVKVFPQKLTFVEGIIKLSFKASFFGKEASSGYNY 739 (760)
Q Consensus 661 ln~ps~~~~~~~~~~~~~t~~rtv~N~~~~~~~y~~~~~~-~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 739 (760)
++...+-++.+.-+ ...+.+.+++|.|+.+..|+..... +.+..++++|..-.+ ++|++.+++|+|.+... +.+.
T Consensus 12 ~~~~~ldFG~v~~g-~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~--g~f~ 87 (112)
T 2e6j_A 12 FNFELLDIGKVFTG-SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL--GNFE 87 (112)
T ss_dssp ESCSEEEEEEEESS-CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC--EEEE
T ss_pred ECcccEecEeEEEC-CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc--ceEE
Confidence 34444444444321 1566788999999999999984311 123447778999998 67899999999987432 3334
Q ss_pred EEEEEE
Q 036830 740 GSITWS 745 (760)
Q Consensus 740 G~~~~~ 745 (760)
=.|++.
T Consensus 88 ~~i~v~ 93 (112)
T 2e6j_A 88 EEFLVN 93 (112)
T ss_dssp EEECEE
T ss_pred EEEEEE
Confidence 455554
|
| >3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.32 E-value=9.7 Score=34.36 Aligned_cols=82 Identities=7% Similarity=0.030 Sum_probs=57.0
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCC----CCcEEEEecceeEEeeCceEEEEEEEEEEecC-----C--CCceEEEEEEE
Q 036830 677 IRTVKRTVTNVGSPNATYISMVNAP----SGLAVKVFPQKLTFVEGIIKLSFKASFFGKEA-----S--SGYNYGSITWS 745 (760)
Q Consensus 677 ~~t~~rtv~N~~~~~~~y~~~~~~~----~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~-----~--~~~~~G~~~~~ 745 (760)
..+-++|++|.|..+.+|++..... ..--++++|..-++ .+|++.+++|++..+.. + ..-++--|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 4456789999999999999985321 11236778999988 68999998888876221 1 12345566654
Q ss_pred -CCceEEEEEEEEEE
Q 036830 746 -DDRHSVRMMFAVDV 759 (760)
Q Consensus 746 -~~~~~v~~P~~~~~ 759 (760)
+++.+..+|+.-.+
T Consensus 123 Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 123 LDRGKDYFLTISGNY 137 (140)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred eecCCcEEEEEeccc
Confidence 66777888887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 760 | ||||
| d1v6ca_ | 435 | c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud | 2e-38 | |
| d1r6va_ | 671 | c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni | 5e-14 | |
| d1r6va_ | 671 | c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni | 2e-07 | |
| d1to2e_ | 281 | c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie | 1e-10 | |
| d1to2e_ | 281 | c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie | 1e-05 | |
| d1p8ja2 | 334 | c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou | 1e-10 | |
| d1r0re_ | 274 | c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls | 5e-10 | |
| d1r0re_ | 274 | c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls | 4e-04 | |
| d1gcia_ | 269 | c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: | 2e-09 | |
| d1gcia_ | 269 | c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: | 4e-04 | |
| d2id4a2 | 339 | c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak | 3e-09 | |
| d2ixta1 | 309 | c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus | 1e-08 | |
| d1wmda2 | 318 | c.41.1.1 (A:1-318) Alkaline serine protease kp-43, | 3e-08 | |
| d1wmda2 | 318 | c.41.1.1 (A:1-318) Alkaline serine protease kp-43, | 0.001 | |
| d2pwaa1 | 279 | c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach | 5e-07 | |
| d1dbia_ | 280 | c.41.1.1 (A:) Thermostable serine protease {Bacill | 5e-06 | |
| d1dbia_ | 280 | c.41.1.1 (A:) Thermostable serine protease {Bacill | 3e-04 | |
| d1thma_ | 279 | c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar | 1e-05 | |
| d1thma_ | 279 | c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar | 0.004 | |
| d1t1ga_ | 357 | c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bac | 3e-05 | |
| d1t1ga_ | 357 | c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bac | 0.003 |
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Score = 146 bits (368), Expect = 2e-38
Identities = 81/488 (16%), Positives = 143/488 (29%), Gaps = 81/488 (16%)
Query: 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRA 207
A + I +ID+G N + G +
Sbjct: 21 AGNRTICIIDSGYDRSHNDLNA--------------------------NNVTGTNN---- 50
Query: 208 STNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEG 267
+ N + HGTH A T A G P + K
Sbjct: 51 -SGTGNWYQPGNNNAHGTHVAGTIAAIA---------NNEGVVGVMPNQNANIH-IVKVF 99
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
+G ++ AI V+ ++ + GV++I +AGN
Sbjct: 100 NEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGSTTTERNALNTHYNNGVLLIAAAGN 159
Query: 328 DGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYG 387
G ++ + + +VAA + D + + I G ++ + T + G
Sbjct: 160 AGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILS-----TVTVGEG 214
Query: 388 KAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILP 447
+ + S S + + N A G +
Sbjct: 215 RLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTS-------- 266
Query: 448 YAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENIL--K 505
++ ++ + + + I T ++ Y +S PGL ++
Sbjct: 267 FSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDAN 326
Query: 506 PDVAAPGVAVLAAIVPRPDRPGG---IPAGEKPATYALRSGTSMACPHVTGAAAFIKSVR 562
D+ P V+V A G + + Y +GTSMA PHV+G A + S
Sbjct: 327 SDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYH 386
Query: 563 RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGLVFKTTI 622
+ + S +++AL TA G ++ G G IN + A
Sbjct: 387 PECSASQVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAK---------- 425
Query: 623 KDYLRFLC 630
YL C
Sbjct: 426 -AYLDESC 432
|
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Score = 73.2 bits (178), Expect = 5e-14
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 23/142 (16%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT----YALRSG 543
VA FSSR G V APGV +L+ + PAT Y G
Sbjct: 328 VAGFSSRSDG--------VSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQG 379
Query: 544 TSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGA 603
TSMA PHVTG A + I+ L TA ++ G H+ G
Sbjct: 380 TSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW-----------DHDTGY 428
Query: 604 GEINPLKALNPGLVFKTTIKDY 625
G + AL L + ++++
Sbjct: 429 GLVKLDAALQGPLPTQGGVEEF 450
|
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Score = 52.4 bits (124), Expect = 2e-07
Identities = 47/331 (14%), Positives = 83/331 (25%), Gaps = 67/331 (20%)
Query: 46 LIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGH 105
+++ + E+ K+ + + L I G + + AL+
Sbjct: 34 ILVGYNDRSEVDKIV------KAVNGKVVLELPQIKVVSIKLNGMTVKQAYDKIKALA-L 86
Query: 106 DHVVSVFPDPVLQLHTTRS-----------WDFLAAAAKPAKNTWFNHKYHKAA------ 148
+ V P +L L + A+ N + A
Sbjct: 87 KGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQ 146
Query: 149 -------SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGA 201
++I++ V+DTG+ P Q + +
Sbjct: 147 LWEEASGTNIIVAVVDTGVDGTHPDLEGQVIAGYRPAFDE-------------------- 186
Query: 202 RHCSRASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASY 261
S GTH A T A I G F A
Sbjct: 187 --------ELPAGTDSSYGGSAGTHVAGTIAAKKDGKGIVGVAPGAKIMPIVIFDDPALV 238
Query: 262 KACKEGGCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVV 321
G + I A G +++ + + + +A + GVV+
Sbjct: 239 GG--NGYVGDDYVAAGIIWATDHGAKVMNH-----SWGGWGYSYTMKEAFDYAMEHGVVM 291
Query: 322 ICSA-GNDGPYPFTVANTAPWLFTVAASTID 351
+ SA N P + VAA
Sbjct: 292 VVSAGNNTSDSHHQYPAGYPGVIQVAALDYY 322
|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
Score = 61.1 bits (147), Expect = 1e-10
Identities = 43/158 (27%), Positives = 58/158 (36%), Gaps = 36/158 (22%)
Query: 455 AGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVA 514
AG + +S + + + A FSS GP + DV APGV+
Sbjct: 153 AGNEGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGP--------ELDVMAPGVS 204
Query: 515 VLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSAL 574
+ + PG Y +GTSMA PHV GAAA I S WT + ++S+L
Sbjct: 205 IQS------TLPGN--------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSL 250
Query: 575 MTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKAL 612
T T + G G IN A
Sbjct: 251 ENTTT--------------KLGDSFYYGKGLINVQAAA 274
|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 51/225 (22%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S++ + VID+GI P G AS
Sbjct: 24 SNVKVAVIDSGIDSSHPDLKVAG----------------------------------GAS 49
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ +D HGTH V+ + G +P + + + K +G
Sbjct: 50 MVPSETNPFQDNNSHGTH---------VAGTVAALNNSIGVLGVAPSASLYAVKVLGADG 100
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
+ I+ I+ AI + +D+I++S+G + + A GVVV+ +AGN
Sbjct: 101 SGQYSWIINGIEWAIANNMDVINMSLG-----GPSGSAALKAAVDKAVASGVVVVAAAGN 155
Query: 328 DGPY--PFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTA 370
+G TV + +A +D Q G + A
Sbjct: 156 EGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGPELDVMA 200
|
| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Furin, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 61.3 bits (147), Expect = 1e-10
Identities = 11/72 (15%), Positives = 24/72 (33%)
Query: 542 SGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEM 601
+GTS + P G A + T+ ++ ++ T+ + H
Sbjct: 257 TGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSY 316
Query: 602 GAGEINPLKALN 613
G G ++ +
Sbjct: 317 GYGLLDAGAMVA 328
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus subtilis, carlsberg [TaxId: 1423]
Score = 58.8 bits (141), Expect = 5e-10
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 28/108 (25%)
Query: 505 KPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRK 564
+ +V APG G+ + TYA +GTSMA PHV GAAA I S
Sbjct: 194 ELEVMAPG--------------AGVYSTYPTNTYATLNGTSMASPHVAGAAALILSKHPN 239
Query: 565 WTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKAL 612
+ S +++ L +TAT + G G IN A
Sbjct: 240 LSASQVRNRLSSTAT--------------YLGSSFYYGKGLINVEAAA 273
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus subtilis, carlsberg [TaxId: 1423]
Score = 40.7 bits (94), Expect = 4e-04
Identities = 48/280 (17%), Positives = 87/280 (31%), Gaps = 55/280 (19%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
+++ + V+DTGI P N G F
Sbjct: 24 ANVKVAVLDTGIQASHPDLNVVG--------------GASF------------------- 50
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ D GHGTH + + G +P + + K G
Sbjct: 51 --VAGEAYNTDGNGHGTHV---------AGTVAALDNTTGVLGVAPSVSLYAVKVLNSSG 99
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
S + I+ I+ A +G+D+I++ + + + +A RGVVV+ +AGN
Sbjct: 100 SGSYSGIVSGIEWATTNGMDVINM-----SLGGASGSTAMKQAVDNAYARGVVVVAAAGN 154
Query: 328 DG----PYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYP 383
G + V A + + S +G + + + + TY
Sbjct: 155 SGNSGSTNTIGYPAKYDSVIAVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTYPTNTYA 214
Query: 384 LAYGKAIA-VNSTLVSQASQCLYTTLYPMDTRGRKIAVAE 422
G ++A + + + L R R + A
Sbjct: 215 TLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 254
|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus lentus [TaxId: 1467]
Score = 56.9 bits (136), Expect = 2e-09
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 36/125 (28%)
Query: 488 VAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMA 547
A FS G G D+ APGV + + +TYA +GTSMA
Sbjct: 180 RASFSQYGAG--------LDIVAPGV--------------NVQSTYPGSTYASLNGTSMA 217
Query: 548 CPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEIN 607
PHV GAAA +K W+ I++ L TAT + + + G+G +N
Sbjct: 218 TPHVAGAAALVKQKNPSWSNVQIRNHLKNTAT--------------SLGSTNLYGSGLVN 263
Query: 608 PLKAL 612
A
Sbjct: 264 AEAAT 268
|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus lentus [TaxId: 1467]
Score = 40.7 bits (94), Expect = 4e-04
Identities = 49/244 (20%), Positives = 86/244 (35%), Gaps = 51/244 (20%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S + + V+DTGI P N +G F
Sbjct: 24 SGVKVAVLDTGISTH-PDLNIRG--------------GASFV------------------ 50
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
S++D GHGTH A T A G +P + + + K G
Sbjct: 51 ---PGEPSTQDGNGHGTHVAGTIA---------ALNNSIGVLGVAPSAELYAVKVLGASG 98
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
S ++I Q ++ A ++G+ + ++S+G + A + RGV+V+ ++GN
Sbjct: 99 SGSVSSIAQGLEWAGNNGMHVANLSLGSPSPSATLEQAVNSA-----TSRGVLVVAASGN 153
Query: 328 DGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYG 387
G + V A+ + + S G G I +++ + TY G
Sbjct: 154 SGAGSISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNG 213
Query: 388 KAIA 391
++A
Sbjct: 214 TSMA 217
|
| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Kexin, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.1 bits (136), Expect = 3e-09
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Query: 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNA 596
GTS A P G + T+ ++ + +A + S
Sbjct: 256 CSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGK 315
Query: 597 NP-HEMGAGEINPLKALN 613
H G G+I+ K +
Sbjct: 316 KYSHRYGFGKIDAHKLIE 333
|
| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Sphericase species: Bacillus sphaericus [TaxId: 1421]
Score = 55.3 bits (131), Expect = 1e-08
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNA 596
Y SGTSMA PHV+G AA I + + + ++S L A D G
Sbjct: 242 GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG----GYGAAIG 297
Query: 597 NPHEMGAGEIN 607
+ + G G
Sbjct: 298 DDYASGFGFAR 308
|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease kp-43, N-terminal domain species: Bacillus sp. KSM-KP43 [TaxId: 109322]
Score = 53.7 bits (127), Expect = 3e-08
Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 18/119 (15%)
Query: 500 TENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIK 559
+ +KPDV APG +L+A + Y GTSMA P V G A ++
Sbjct: 212 KDGRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYM--GGTSMATPIVAGNVAQLR 269
Query: 560 SVRRK-----WTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613
K S++K+AL+ A G G G + K+LN
Sbjct: 270 EHFVKNRGITPKPSLLKAALIAGAA-----------DIGLGYPNGNQGWGRVTLDKSLN 317
|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease kp-43, N-terminal domain species: Bacillus sp. KSM-KP43 [TaxId: 109322]
Score = 39.5 bits (90), Expect = 0.001
Identities = 29/207 (14%), Positives = 53/207 (25%), Gaps = 36/207 (17%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
++ V DTG+ + F+ A
Sbjct: 22 QGQIVAVADTGLDTGRNDSSMH----------------EAFRGK------------ITAL 53
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
+ ++ D GHGTH A + GN +N + + + G
Sbjct: 54 YALGRTNNANDTNGHGTHVAGSVLGNGSTNKGMA--------PQANLVFQSIMDSGGGLG 105
Query: 269 CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGND 328
+ + A G I + S G + + A + + ++
Sbjct: 106 GLPSNLQTLFSQAYSAGARIHTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGP 165
Query: 329 GPYPFTVANTAPWLFTVAASTIDRDFQ 355
+ TA TV A+ R
Sbjct: 166 NGGTISAPGTAKNAITVGATENLRPSF 192
|
| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Proteinase K species: Fungus (Tritirachium album), strain limber [TaxId: 37998]
Score = 49.7 bits (117), Expect = 5e-07
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTP 587
+ SGTSMA PHV G AA++ ++ + S + + TA D + P
Sbjct: 216 STRSISGTSMATPHVAGLAAYLMTLGKTTAASACR-YIADTANKGDLSNIP 265
|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermostable serine protease species: Bacillus sp., AK.1 [TaxId: 1409]
Score = 46.5 bits (109), Expect = 5e-06
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 538 YALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNAN 597
YA SGTSMA PHV G AA + S + I+ A+ TA TGT
Sbjct: 219 YAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGTGT----------- 265
Query: 598 PHEMGAGEINPLKALN 613
G IN A+
Sbjct: 266 --YFKYGRINSYNAVT 279
|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermostable serine protease species: Bacillus sp., AK.1 [TaxId: 1409]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 42/201 (20%), Positives = 61/201 (30%), Gaps = 45/201 (22%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S I VIDTG+ P + + +
Sbjct: 31 SGQEIAVIDTGVDYTHPDLDGKVIKGYDFVDNDYDP------------------------ 66
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
D HGTH A AA + G+A T RI + +A
Sbjct: 67 ---------MDLNNHGTHVAGIAAAETNNATGIAGMAPNT--------RILAVRAL---D 106
Query: 269 CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGND 328
+G+ L I DAI D + I LS + +A +G VV+ +AGN+
Sbjct: 107 RNGSGTLSDIADAIIYAADSGAEVINLSLGCDCHTTTLENAVN-YAWNKGSVVVAAAGNN 165
Query: 329 GPYPFTVANTAPWLFTVAAST 349
G + + V A
Sbjct: 166 GSSTTFEPASYENVIAVGAVD 186
|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermitase species: Thermoactinomyces vulgaris [TaxId: 2026]
Score = 45.5 bits (106), Expect = 1e-05
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNA 596
TYA SGTSMA PHV G A + S R S I++A+ TA TGT
Sbjct: 217 TYASLSGTSMATPHVAGVAGLLASQGRSA--SNIRAAIENTADKISGTGT---------- 264
Query: 597 NPHEMGAGEINPLKAL 612
G +N KA+
Sbjct: 265 ---YWAKGRVNAYKAV 277
|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermitase species: Thermoactinomyces vulgaris [TaxId: 2026]
Score = 37.8 bits (86), Expect = 0.004
Identities = 29/207 (14%), Positives = 52/207 (25%), Gaps = 44/207 (21%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
S I ++DTG+ P K++G
Sbjct: 30 SGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDND 62
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKAC-KEG 267
+ N G +P + I + + G
Sbjct: 63 STPQNGNGHGTHCAGIAA--------------AVTNNSTGIAGTAPKASILAVRVLDNSG 108
Query: 268 GCSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGN 327
+ A+ I A G +IS+S+G + + A + V +AGN
Sbjct: 109 SGTWTAVANGITYAADQGAKVISLSLG--GTVGNSGLQQAVNYAWNKGSVVVAAAGNAGN 166
Query: 328 DGPYPFTVANTAPWLFTVAASTIDRDF 354
P + A + + + F
Sbjct: 167 TAPNYPAYYSNAIAVASTDQNDNKSSF 193
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Score = 44.3 bits (103), Expect = 3e-05
Identities = 33/186 (17%), Positives = 46/186 (24%), Gaps = 40/186 (21%)
Query: 149 SDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRAS 208
I +I G + S +
Sbjct: 24 QGQCIAIIALGGGYDETSLAQ----------------------------------YFASL 49
Query: 209 TNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG 268
S G G + +AG A P ++IA Y A
Sbjct: 50 GVSAPQVVSVSVDGATNQPTGDPNGPDGEVELDIEVAGALA----PGAKIAVYFAPNTDA 105
Query: 269 CSGAAILQAIDDAIHDGVDIISISIGLSNSEADY-MNDPIAIGALHAQQRGVVVICSAGN 327
AI A+ D H I+SIS G + L A GV V+ +AG+
Sbjct: 106 GFLNAITTAVHDPTH-KPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAAAGD 164
Query: 328 DGPYPF 333
G
Sbjct: 165 SGSTDG 170
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Score = 38.2 bits (87), Expect = 0.003
Identities = 41/332 (12%), Positives = 76/332 (22%), Gaps = 24/332 (7%)
Query: 273 AILQAIDDAIHDGVDIISISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYP 332
AI+ + L S ++ + D
Sbjct: 29 AIIALGGGYDET--SLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNGPDGEVELDIEVA 86
Query: 333 FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAV 392
+A A A +T + + K + +S+S ++ A A+
Sbjct: 87 GALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNR 146
Query: 393 NSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452
+ + + + +V+ A G
Sbjct: 147 AFLDAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL------VASAG 200
Query: 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPG 512
++ + N + + +P + V ++ G G PDVA
Sbjct: 201 RIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSANPGAG---SGRGVPDVAGNA 257
Query: 513 VAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKS 572
V + GTS P A I K +
Sbjct: 258 DPATGYEVVIDG------------ETTVIGGTSAVAPLFAALVARINQKLGK-PVGYLNP 304
Query: 573 ALMTTATVYDNTGTPLTNSSGNNANPHEMGAG 604
L + T N N A ++ G G
Sbjct: 305 TLYQLPPEVFHDITEGNNDIANRARIYQAGPG 336
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 760 | |||
| d1r6va_ | 671 | Fervidolysin {Fervidobacterium pennivorans [TaxId: | 100.0 | |
| d1v6ca_ | 435 | Alkaline serine protease Apa1 {Pseudoalteromonas s | 100.0 | |
| d1dbia_ | 280 | Thermostable serine protease {Bacillus sp., AK.1 [ | 100.0 | |
| d1thma_ | 279 | Thermitase {Thermoactinomyces vulgaris [TaxId: 202 | 100.0 | |
| d1r0re_ | 274 | Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 | 100.0 | |
| d1to2e_ | 281 | Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' | 100.0 | |
| d1gcia_ | 269 | Subtilisin {Bacillus lentus [TaxId: 1467]} | 100.0 | |
| d2ixta1 | 309 | Sphericase {Bacillus sphaericus [TaxId: 1421]} | 100.0 | |
| d2pwaa1 | 279 | Proteinase K {Fungus (Tritirachium album), strain | 100.0 | |
| d1wmda2 | 318 | Alkaline serine protease kp-43, N-terminal domain | 100.0 | |
| d1p8ja2 | 334 | Furin, N-terminal domain {Mouse (Mus musculus) [Ta | 100.0 | |
| d2id4a2 | 339 | Kexin, N-terminal domain {Baker's yeast (Saccharom | 100.0 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 99.96 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 99.95 | |
| d1scjb_ | 71 | Subtilisin prosegment {Bacillus subtilis [TaxId: 1 | 98.72 | |
| d1v5ib1 | 72 | Proteinase A inhibitor 1, POIA1 {Oyster mushroom ( | 98.54 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 96.2 |
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Probab=100.00 E-value=6.5e-53 Score=492.18 Aligned_cols=366 Identities=23% Similarity=0.221 Sum_probs=265.3
Q ss_pred CCCCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHH----HH--Hh
Q 036830 29 EIPKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSE----AS--AL 102 (760)
Q Consensus 29 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~----i~--~L 102 (760)
..+++|||.||+.... +++++++ ..++++.+.. ++.+.++++... .+ ++
T Consensus 29 ~~~~~~iV~~k~~~~~-----------------~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 83 (671)
T d1r6va_ 29 YTEGKILVGYNDRSEV-----------------DKIVKAV-------NGKVVLELPQ-IKVVSIKLNGMTVKQAYDKIKA 83 (671)
T ss_dssp BCTTEEEEEESSHHHH-----------------HHHHHHH-------TCEEEEEEGG-GTEEEEECSSCCHHHHHHHHTT
T ss_pred cCCCeEEEEECCccCH-----------------HHHHHhc-------CCEEEEEecc-cceEEEEcCchhHHHHHHHHHH
Confidence 4678999999975421 2333333 2345566654 667777766432 22 33
Q ss_pred cCCCCeEEEEeCcccccccC----CCcc-----------------------ccccccCCCcccccc-cccccC-CCCeEE
Q 036830 103 SGHDHVVSVFPDPVLQLHTT----RSWD-----------------------FLAAAAKPAKNTWFN-HKYHKA-ASDIVI 153 (760)
Q Consensus 103 ~~~p~V~~V~~~~~~~~~~~----~s~~-----------------------~~g~~~~~~~~~~~~-~~~~~~-G~Gv~V 153 (760)
..+|+|++|+|+...++... ..+. .|++.. +++. ..|+.. |+||+|
T Consensus 84 ~~~~~V~~vep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~-----i~~~~a~~~~~tG~gV~V 158 (671)
T d1r6va_ 84 LALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEA-----IGVTQQLWEEASGTNIIV 158 (671)
T ss_dssp SCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHH-----TTCCHHHHHHCSCTTCEE
T ss_pred hcCCCceEECcceeEeeccccccCCCccccccccccccccccCcCccccccCcChhh-----cCccHHHHhcCCCCCCEE
Confidence 46899999999866554311 0000 122221 1132 347777 999999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchhhhhccc
Q 036830 154 GVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHTASTAAG 233 (760)
Q Consensus 154 gVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGi~Ag 233 (760)
||||||||++||+|.+. +...+++..+... ....++.|..||||||||||||
T Consensus 159 aViDtGvd~~Hpdl~~~---------------------------~~~~~~~~~~~~~-~~~~~~~d~~gHGT~VAGiiaa 210 (671)
T d1r6va_ 159 AVVDTGVDGTHPDLEGQ---------------------------VIAGYRPAFDEEL-PAGTDSSYGGSAGTHVAGTIAA 210 (671)
T ss_dssp EEEESCCBTTSGGGTTT---------------------------BCCEEEGGGTEEE-CTTCBCCTTCSHHHHHHHHHHC
T ss_pred EEEcCCcCCCChhhcCC---------------------------cccCccccccCCC-CCCCcCcccCCCCccccceeee
Confidence 99999999999999742 1111111111000 0123456788999999999999
Q ss_pred ccccccccccccCCcccccCCCCeEEEEEeccC------CC-CCHHHHHHHHHHHHhCCCcEEEecccCCCCCCCCCCcH
Q 036830 234 NYVSNAIYFGLAGGTARGGSPFSRIASYKACKE------GG-CSGAAILQAIDDAIHDGVDIISISIGLSNSEADYMNDP 306 (760)
Q Consensus 234 ~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~ 306 (760)
+.+ +..+.||||+|+|+++|++++ .+ ...+.+++||+||+++|++|||||||+.. ....
T Consensus 211 ~~~---------~~g~~GvAp~a~l~~~rv~~~~~~~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~g~~~-----~~~~ 276 (671)
T d1r6va_ 211 KKD---------GKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-----YSYT 276 (671)
T ss_dssp CCS---------SSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC-----CCHH
T ss_pred ecc---------ccceeeecCcceEEEEEecccccccCCCCcccHHHHHHHHHHHHhCCCcEEeccccccc-----CChH
Confidence 752 234579999999999999964 23 66788999999999999999999999873 4567
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCC-CCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCCCCceeeeE
Q 036830 307 IAIGALHAQQRGVVVICSAGNDGPYP-FTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLSRSKTYPLA 385 (760)
Q Consensus 307 ~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~ 385 (760)
+..++..+.++|+++|+||||++.+. ...++..|++|+|||++...
T Consensus 277 ~~~ai~~a~~~gv~vV~aAGN~~~~~~~~~Pa~~~~vi~Vga~~~~~--------------------------------- 323 (671)
T d1r6va_ 277 MKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG--------------------------------- 323 (671)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET---------------------------------
T ss_pred HHHHHHHHHhccCcEEEEEecCCCCccccCCccCCceEEEEEecCCC---------------------------------
Confidence 77788999999999999999998654 45678889999999865321
Q ss_pred ecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHHHHHHHHhc
Q 036830 386 YGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGFRIINYINS 465 (760)
Q Consensus 386 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 465 (760)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T d1r6va_ 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCC----CCCCCCCCcceee
Q 036830 466 NKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGG----IPAGEKPATYALR 541 (760)
Q Consensus 466 ~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~----~~~~~~~~~y~~~ 541 (760)
....++.||+|||.. ||+|||++|+|+++........ .......+.|..+
T Consensus 324 ------------------~~~~~a~fS~~g~~~--------dv~APG~~i~st~~~~~~~~~~~~~~~~~~~~~~~y~~~ 377 (671)
T d1r6va_ 324 ------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYY 377 (671)
T ss_dssp ------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEE
T ss_pred ------------------CcceeeeccCCCCCc--------eEEecCCCeEeecCCCCccccccccccccccCCCeeeee
Confidence 013578999999976 9999999999998754322111 1111224789999
Q ss_pred ecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCCCce
Q 036830 542 SGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALNPGL 616 (760)
Q Consensus 542 sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 616 (760)
+|||||||||||++|||+|++|+|+++|||++|++||++++. ..++..||||+||+.+||+..+
T Consensus 378 sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~-----------~g~~~~~G~G~vna~~Av~~~~ 441 (671)
T d1r6va_ 378 QGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG-----------NGWDHDTGYGLVKLDAALQGPL 441 (671)
T ss_dssp ESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS-----------SSCBTTTBTCBCCHHHHHHCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCC-----------CCCCCCcccChhCHHHHhhCcC
Confidence 999999999999999999999999999999999999997643 3467889999999999998544
|
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Probab=100.00 E-value=9.2e-49 Score=437.30 Aligned_cols=394 Identities=21% Similarity=0.180 Sum_probs=234.9
Q ss_pred cccccccCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKAASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRD 219 (760)
Q Consensus 140 ~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d 219 (760)
++.+|+..|+||+|||||||||++||+|.+. ++..+++.... +...+.|
T Consensus 13 a~~~~~~~G~gv~VaviDtGid~~Hp~~~~~---------------------------~~~~~~~~~~~----~~~~~~d 61 (435)
T d1v6ca_ 13 ATVLSDSQAGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSGTG----NWYQPGN 61 (435)
T ss_dssp GGGSCCTTGGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTTSC----CTTCCCS
T ss_pred cchhhhcCCCCcEEEEEcCCCCCCChhhccC---------------------------eeeeeccCCCC----CCCCCCC
Confidence 6678876799999999999999999999741 12222222211 2255778
Q ss_pred CCCccchhhhhcccccccccccccccCCcccccCC--CCeEEEEEeccCCC-CCHHHHHHHHHHHHh-CCCcEEEecccC
Q 036830 220 PLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSP--FSRIASYKACKEGG-CSGAAILQAIDDAIH-DGVDIISISIGL 295 (760)
Q Consensus 220 ~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP--~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~-~g~dVIN~SlG~ 295 (760)
++||||||||||||+.. +..+.|||| +++|+.+|++.... +...++++||+++++ .+++|||+|||.
T Consensus 62 ~~gHGThvAgiiag~~~---------~~g~~GvAp~~~~~l~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~vin~S~g~ 132 (435)
T d1v6ca_ 62 NNAHGTHVAGTIAAIAN---------NEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGG 132 (435)
T ss_dssp SCCHHHHHHHHHHCCCS---------SSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCB
T ss_pred CCCcHHHHHHHHhccCC---------CCceEEEecccCceeeeeecccccccchhhhhhhHHHHHhhcccceEEecccCC
Confidence 99999999999999863 233579999 89999999998765 677789999999986 699999999998
Q ss_pred CCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEe--eeeeec
Q 036830 296 SNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIK--GTAISL 373 (760)
Q Consensus 296 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~--g~~~~~ 373 (760)
.. ....+..+++.+.++|+++|+||||+|....++++..+++|+||+++.+.........+....+. |..+..
T Consensus 133 ~~-----~~~~~~~a~~~~~~~g~~~v~aaGN~g~~~~~~p~~~~~vi~Vga~~~~~~~~~~s~~g~~vdv~apG~~i~s 207 (435)
T d1v6ca_ 133 SG-----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILS 207 (435)
T ss_dssp SC-----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCSSEEEEEECSSEEE
T ss_pred CC-----CCHHHHhhhhhccccceEEEEeccCCCCCCcccCccCCCceEEEEecCCCCcccccCCCCceEEeecccceee
Confidence 84 34556677788999999999999999998888899999999999987765433222222221111 111111
Q ss_pred ccCCCCceeeeEeccc-ccccc-cccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEe
Q 036830 374 SNLSRSKTYPLAYGKA-IAVNS-TLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEV 451 (760)
Q Consensus 374 ~~~~~~~~~p~~~~~~-~~~~~-~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i 451 (760)
..+.....+....... ..... ........|....+.. +..+....|.......+............++....
T Consensus 208 t~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (435)
T d1v6ca_ 208 TVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAP------APINASATGALAECTVNGTSFSCGNMANKICLVER 281 (435)
T ss_dssp ECSTTCEEEEEEEETTEECGGGCCEECEEEEECSSSEEE------CCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEEC
T ss_pred eeecCCCcccccccCCceeeccccccccccccccccccc------cceeccccceEEEEecCCceeeccccccccceeec
Confidence 0010110100000000 00000 0000000000000000 01111222222222222211111000011111100
Q ss_pred c------hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCC--CCcccCceeeCCceEEeeecCCC
Q 036830 452 G------KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPT--ENILKPDVAAPGVAVLAAIVPRP 523 (760)
Q Consensus 452 ~------~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~--~~~~KPDI~APG~~I~Sa~~~~~ 523 (760)
. ............. .....+..+++.+|.... ....|||+.+||..|.++.....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~di~aPg~~i~~a~g~~~ 344 (435)
T d1v6ca_ 282 VGNQGSSYPEINSTKACKTA-----------------GAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLAL 344 (435)
T ss_dssp CSCSSSSCTHHHHHHHHHHT-----------------TCSEEEEECCSSSCSCCCCEEECTTCCCCSCEEEECHHHHHHH
T ss_pred cCCccccceeeeeceeeccc-----------------CCcceEEeccCCCCCcCCccccccCCceEEEEEEecccccccc
Confidence 0 0000111111111 111234445555554432 24579999999998875532100
Q ss_pred CCC---CCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCC
Q 036830 524 DRP---GGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHE 600 (760)
Q Consensus 524 ~~~---~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~ 600 (760)
... ...........|..|||||||||||||++|||+|+||+|+++|||++||+||++++ ..+++++
T Consensus 345 ~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~s~~~vk~~L~~TA~~~~-----------~~~~~~~ 413 (435)
T d1v6ca_ 345 KAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLS-----------VAGRDNQ 413 (435)
T ss_dssp GGGTTSEEEEEEEEEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCS-----------SSSCBTT
T ss_pred ccccCCcceecCCCCCCeeEEccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcccC-----------CCCCCCC
Confidence 000 00000011257999999999999999999999999999999999999999999763 3457889
Q ss_pred CCCcccCccccC
Q 036830 601 MGAGEINPLKAL 612 (760)
Q Consensus 601 ~G~G~vn~~~Al 612 (760)
||+|+||+++|+
T Consensus 414 ~G~G~vn~~~A~ 425 (435)
T d1v6ca_ 414 TGYGMINAVAAK 425 (435)
T ss_dssp TBTCBCCHHHHH
T ss_pred cccceecHHHHH
Confidence 999999999995
|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermostable serine protease species: Bacillus sp., AK.1 [TaxId: 1409]
Probab=100.00 E-value=1.6e-48 Score=409.18 Aligned_cols=259 Identities=30% Similarity=0.365 Sum_probs=212.0
Q ss_pred cccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCC
Q 036830 138 TWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSG 215 (760)
Q Consensus 138 ~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~ 215 (760)
++++.+|+++ |+||+|||||||||++||+|.+ +++..++|... ..
T Consensus 18 i~~~~aw~~~~~G~gv~VaviDsGi~~~h~~l~~---------------------------~~~~~~~~~~~------~~ 64 (280)
T d1dbia_ 18 TYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVDN------DY 64 (280)
T ss_dssp GTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTTT------BS
T ss_pred CCHHHHHhccCCCCCeEEEEEccCcCCCChhhcC---------------------------CeeecccccCC------CC
Confidence 3378999998 8999999999999999999973 23333333322 14
Q ss_pred CCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEeccc
Q 036830 216 SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIG 294 (760)
Q Consensus 216 ~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG 294 (760)
.+.|..+|||||||+|+|...+ ...+.||||+|+|+.+|+++..+ +...++++||+|++++|++|||+|||
T Consensus 65 ~~~d~~~HGT~vag~i~~~~~~--------~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~~g~~iin~S~g 136 (280)
T d1dbia_ 65 DPMDLNNHGTHVAGIAAAETNN--------ATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLG 136 (280)
T ss_dssp CCCCSSSHHHHHHHHHHCCCSS--------SSSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred ccccccccccceeEeeeccccC--------CCceeEEeccCEEEEEEEeCCCCCcCHHHHHHHHHHHHHcCCcEeecccc
Confidence 5678899999999999987642 34468999999999999998776 88999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecc
Q 036830 295 LSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLS 374 (760)
Q Consensus 295 ~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~ 374 (760)
... ..+....+...+.++|+++|+||||+|......++..+++|+|||.+.+
T Consensus 137 ~~~-----~~~~~~~a~~~a~~~gilvv~aaGn~g~~~~~~Pa~~~~vi~Vga~~~~----------------------- 188 (280)
T d1dbia_ 137 CDC-----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY----------------------- 188 (280)
T ss_dssp SCC-----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-----------------------
T ss_pred ccc-----cchhHHHHHHHHHHCCEEEEEecCccCCCCccCCCCCCCEEEEeeecCC-----------------------
Confidence 874 3455566778899999999999999998777788888999999985432
Q ss_pred cCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechh
Q 036830 375 NLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKV 454 (760)
Q Consensus 375 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~ 454 (760)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T d1dbia_ 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCC
Q 036830 455 AGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEK 534 (760)
Q Consensus 455 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~ 534 (760)
+.++.||++||.. |++|||.+|++....
T Consensus 189 -------------------------------~~~a~~S~~g~~~--------d~~apg~~i~~~~~~------------- 216 (280)
T d1dbia_ 189 -------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITG------------- 216 (280)
T ss_dssp -------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETT-------------
T ss_pred -------------------------------CCcCCcCCCCCcc--------cccCCccceeccccC-------------
Confidence 5678999999976 999999999999876
Q ss_pred CCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 535 PATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 535 ~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
..|..++|||||||+|||++|||+|. .+++.+||++|++||+++. .++..||+|+||+++||+
T Consensus 217 -~~~~~~sGTS~AaP~vaG~~All~~~--~~t~~~v~~~L~~tA~~~~-------------~~~~~~G~G~ln~~~Al~ 279 (280)
T d1dbia_ 217 -NRYAYMSGTSMASPHVAGLAALLASQ--GRNNIEIRQAIEQTADKIS-------------GTGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -TEEEEECSHHHHHHHHHHHHHHHHHT--TCCHHHHHHHHHHTSBCCT-------------TBTTTBSSEECCHHHHHT
T ss_pred -cceeccCCccccchHHHHHHHHHhCC--CcCHHHHHHHHHHhCcCCC-------------CCCCcCCCCeEcHHHHcC
Confidence 78999999999999999999999995 5689999999999999652 345679999999999986
|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Thermitase species: Thermoactinomyces vulgaris [TaxId: 2026]
Probab=100.00 E-value=6.3e-48 Score=404.86 Aligned_cols=257 Identities=29% Similarity=0.388 Sum_probs=221.1
Q ss_pred cccccccC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSR 218 (760)
Q Consensus 140 ~~~~~~~~-G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 218 (760)
++++|+.+ |+||+|+|||||||++||+|.+ +++..++|.++ ...+.
T Consensus 20 a~~aw~~~tG~Gv~VaViDsGi~~~H~~~~~---------------------------~~~~~~~~~~~------~~~~~ 66 (279)
T d1thma_ 20 APQAWDIAEGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDN------DSTPQ 66 (279)
T ss_dssp HHHHHTTCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTT------BSCCC
T ss_pred HHHHHhccCCCCcEEEEEcCCCCCCChhhcC---------------------------Ceecccccccc------Ccccc
Confidence 78999999 9999999999999999999973 23344444433 24567
Q ss_pred CCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCCC
Q 036830 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLSN 297 (760)
Q Consensus 219 d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~ 297 (760)
|..+|||||||+|++...+ ...+.||||+|+|+.+|++...+ +...+++++|+++++.+++|+|+|||...
T Consensus 67 d~~~HGT~vag~i~~~~~~--------~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~i~n~S~G~~~ 138 (279)
T d1thma_ 67 NGNGHGTHCAGIAAAVTNN--------STGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV 138 (279)
T ss_dssp CSSSHHHHHHHHHHCCCSS--------SSSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred cccccccccceeeeeccCC--------CccccccCCcceEEEEEEEecCCCCcHHHHHHHHHHHhhcCCceeccccCccc
Confidence 8899999999999987643 23458999999999999998776 88899999999999999999999999884
Q ss_pred CCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccCC
Q 036830 298 SEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNLS 377 (760)
Q Consensus 298 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 377 (760)
.......+...+.++|+++|+|+||+|......+...|++++|||++.+
T Consensus 139 -----~~~~~~~a~~~a~~~~~~~v~aagn~g~~~~~~~~~~~~vi~Vga~~~~-------------------------- 187 (279)
T d1thma_ 139 -----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN-------------------------- 187 (279)
T ss_dssp -----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT--------------------------
T ss_pred -----cchhHHHHHHHHHhcCceEEEeccccccCCCccccccccccccccccCC--------------------------
Confidence 4456667778899999999999999998888888888999999986432
Q ss_pred CCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhHH
Q 036830 378 RSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAGF 457 (760)
Q Consensus 378 ~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g~ 457 (760)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T d1thma_ 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCCc
Q 036830 458 RIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPAT 537 (760)
Q Consensus 458 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~~ 537 (760)
+.++.||++|++. ||+|||.+|+++.+. +.
T Consensus 188 ----------------------------~~~~~~S~~G~~~--------di~Apg~~i~~~~~~--------------~~ 217 (279)
T d1thma_ 188 ----------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPT--------------ST 217 (279)
T ss_dssp ----------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETT--------------TE
T ss_pred ----------------------------CCCccccCCCceE--------EEeeeeeccccccCc--------------cc
Confidence 5578999999987 999999999999887 78
Q ss_pred ceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 538 YALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 538 y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
|..++|||||||+|||++|||+|.+| ++.+||++|++||+++. ..+..||+|+||+.+||+
T Consensus 218 ~~~~sGTS~AaP~vaG~~ALl~~~~~--s~~~i~~~L~~tA~~~~-------------g~~~~~G~G~vn~~~Av~ 278 (279)
T d1thma_ 218 YASLSGTSMATPHVAGVAGLLASQGR--SASNIRAAIENTADKIS-------------GTGTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTTC--CHHHHHHHHHHTCBCCT-------------TBTTTBSSEECCHHHHHH
T ss_pred ccccCCcchhhHHHHHHHHHHhcCCc--CHHHHHHHHHhhCccCC-------------CCCCcceeeeEcHHHhhC
Confidence 99999999999999999999999765 79999999999999652 355679999999999986
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus subtilis, carlsberg [TaxId: 1423]
Probab=100.00 E-value=5.2e-48 Score=404.36 Aligned_cols=255 Identities=31% Similarity=0.387 Sum_probs=214.1
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
++.+|+.+ |+||+|||||||||++||+|+. ...++|..+ ...+
T Consensus 13 ~~~~~~~g~tG~gv~VaViDtGv~~~Hp~l~~-----------------------------~~~~~~~~~------~~~~ 57 (274)
T d1r0re_ 13 ADKVQAQGFKGANVKVAVLDTGIQASHPDLNV-----------------------------VGGASFVAG------EAYN 57 (274)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECSTT------CCTT
T ss_pred hHHHHHcCCCCCCeEEEEECCCCCCCChhhcc-----------------------------cCCccccCC------CCCC
Confidence 67899988 9999999999999999999952 112223322 1445
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.|.++|||||||||++... ...+.|+||+|+|+.+|+++..+ +..++++++++++.+++++|+|+|||..
T Consensus 58 ~d~~gHGT~vAgii~~~~~---------~~~~~gvap~a~i~~~~~~~~~~~~~~~~i~~ai~~a~~~~~~i~n~S~~~~ 128 (274)
T d1r0re_ 58 TDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGA 128 (274)
T ss_dssp CCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCccccccccccccccccc---------cccccccCCCcEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCceeccccccc
Confidence 6788999999999998763 22347999999999999998877 7889999999999999999999999988
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC----CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeee
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF----TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~----~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 372 (760)
. ..........++.++++++|+||||+|.... ..+...+++|+|||++.+
T Consensus 129 ~-----~~~~~~~~~~~a~~~~~l~V~aaGN~g~~~~~~~~~~pa~~~~vi~Vga~~~~--------------------- 182 (274)
T d1r0re_ 129 S-----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN--------------------- 182 (274)
T ss_dssp S-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred c-----chhhhhHHHHHHhhCceEEEeeccCCCCCCCcccccccccCCCEEEEEeECCC---------------------
Confidence 4 3445556668899999999999999986532 345667899999986432
Q ss_pred cccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEec
Q 036830 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452 (760)
Q Consensus 373 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~ 452 (760)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T d1r0re_ 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCC
Q 036830 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~ 532 (760)
+.+++||++||. |||+|||++|+++.+.
T Consensus 183 ---------------------------------~~~~~~s~~g~~--------~di~APG~~i~~~~~~----------- 210 (274)
T d1r0re_ 183 ---------------------------------SNRASFSSVGAE--------LEVMAPGAGVYSTYPT----------- 210 (274)
T ss_dssp ---------------------------------SCBCTTCCCSTT--------EEEEEECSSEEEEETT-----------
T ss_pred ---------------------------------CCcccccCCCCC--------EEEEecCCCcccccCC-----------
Confidence 457899999985 4999999999999876
Q ss_pred CCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccC
Q 036830 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKAL 612 (760)
Q Consensus 533 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al 612 (760)
+.|..++|||||||+|||++|||+|++|+|++++||++|++||+++ .++..||+|+||+.+||
T Consensus 211 ---~~~~~~sGTS~AaP~VaG~~All~~~~p~lt~~~i~~~L~~tA~~~--------------~~~~~~G~G~ln~~~A~ 273 (274)
T d1r0re_ 211 ---NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYL--------------GSSFYYGKGLINVEAAA 273 (274)
T ss_dssp ---TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCC--------------SCHHHHTTCBCCHHHHT
T ss_pred ---CCeEeecCCchhHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC--------------CCCCceEcCeecHHHhc
Confidence 7899999999999999999999999999999999999999999864 24567999999999998
Q ss_pred C
Q 036830 613 N 613 (760)
Q Consensus 613 ~ 613 (760)
|
T Consensus 274 ~ 274 (274)
T d1r0re_ 274 Q 274 (274)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]
Probab=100.00 E-value=1.2e-47 Score=403.11 Aligned_cols=257 Identities=31% Similarity=0.402 Sum_probs=215.0
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
++.+|+.+ |+||+|+|||||||++||+|+.. ..+++... +....
T Consensus 13 a~~aw~~g~tG~Gv~IaviDtGv~~~Hp~l~~~-----------------------------~~~~~~~~-----~~~~~ 58 (281)
T d1to2e_ 13 APALHSQGYTGSNVKVAVIDSGIDSSHPDLKVA-----------------------------GGASMVPS-----ETNPF 58 (281)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE-----------------------------EEEECCTT-----CCCTT
T ss_pred cHHHHHCCCCCCCeEEEEECCCCCCCChhhhhc-----------------------------CCccccCC-----CCCCC
Confidence 77899988 99999999999999999999631 11112111 11222
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.+..+|||||||||+|... +....||||+|+|+.+|++...+ ....++++||+|+++.+++|+|+|||..
T Consensus 59 ~~~~~HGT~vAgiiag~~~---------~~~~~giAp~a~l~~~kv~~~~~~~~~~~~~~ai~~a~~~~~~v~n~S~g~~ 129 (281)
T d1to2e_ 59 QDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGP 129 (281)
T ss_dssp CCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred cCcCCCCceeecccccCCC---------CCCcceeecccEEEEEEEeCCCCCcCHHHHHHHHHHHHhccccccccccCCC
Confidence 3467999999999998752 22357999999999999998777 7888999999999999999999999987
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC----CccCCCCceEEeccccccccceeeEEeCCCeeEeeeeee
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF----TVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAIS 372 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~----~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~ 372 (760)
. ....+..+++.+.++|+++|+||||+|.... ..++..+++|+||+++.+
T Consensus 130 ~-----~~~~~~~ai~~~~~~gil~V~aAGN~g~~~~~~~~~~pa~~~~vi~Vga~~~~--------------------- 183 (281)
T d1to2e_ 130 S-----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS--------------------- 183 (281)
T ss_dssp C-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred c-----chHHHHHHHHHHHhcCCcceecccCcccCCCCCCccCCCCCCceEEEEeecCC---------------------
Confidence 3 5567778889999999999999999986532 345667899999986432
Q ss_pred cccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEec
Q 036830 373 LSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVG 452 (760)
Q Consensus 373 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~ 452 (760)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T d1to2e_ 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCC
Q 036830 453 KVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAG 532 (760)
Q Consensus 453 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~ 532 (760)
+.++.||++||.. |++|||.+|+++.+.
T Consensus 184 ---------------------------------~~~~~~S~~G~~~--------d~~apG~~i~s~~~~----------- 211 (281)
T d1to2e_ 184 ---------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPG----------- 211 (281)
T ss_dssp ---------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETT-----------
T ss_pred ---------------------------------CCCCcccCCCCCc--------cccCCCCCceeecCC-----------
Confidence 4578899999977 999999999999876
Q ss_pred CCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccC
Q 036830 533 EKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKAL 612 (760)
Q Consensus 533 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al 612 (760)
+.|..++|||||||+|||++|||+|++|.|++++||++|++||+++. ++..||+|+||+.+||
T Consensus 212 ---~~~~~~~GTS~Aap~vaG~~All~~~~p~lt~~~i~~~L~~tA~~~~--------------~~~~~G~G~ld~~~A~ 274 (281)
T d1to2e_ 212 ---NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------DSFYYGKGLINVQAAA 274 (281)
T ss_dssp ---TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------CHHHHTTCBCCHHHHT
T ss_pred ---CeeEcccCcchhHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC--------------CCCCcccCcccHHHHH
Confidence 78999999999999999999999999999999999999999999652 3556999999999999
Q ss_pred CC
Q 036830 613 NP 614 (760)
Q Consensus 613 ~~ 614 (760)
+.
T Consensus 275 ~~ 276 (281)
T d1to2e_ 275 QH 276 (281)
T ss_dssp SS
T ss_pred hh
Confidence 84
|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Subtilisin species: Bacillus lentus [TaxId: 1467]
Probab=100.00 E-value=2.8e-47 Score=397.58 Aligned_cols=254 Identities=31% Similarity=0.421 Sum_probs=216.5
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
++.+|+.+ |+||+|+||||||+ +||+|... ..++|..+ ...+
T Consensus 13 ~~~aw~~g~tG~gv~V~ViDsGv~-~h~~l~~~-----------------------------~~~~~~~~------~~~~ 56 (269)
T d1gcia_ 13 APAAHNRGLTGSGVKVAVLDTGIS-THPDLNIR-----------------------------GGASFVPG------EPST 56 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCCC-CCTTCCEE-----------------------------EEEECSTT------CCSC
T ss_pred cHHHHhCCCCCCCeEEEEECCCCC-CCcccCcc-----------------------------ccccccCC------CCCc
Confidence 77999987 99999999999998 89999521 11222221 1445
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCCCcEEEecccCC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDGVDIISISIGLS 296 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 296 (760)
.|.++||||||||+++... .....|+||+|+|+.+|++...+ .....+.++++++...++++||+|||..
T Consensus 57 ~d~~~HGT~vAgii~~~~~---------~~~~~giap~a~i~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~in~s~g~~ 127 (269)
T d1gcia_ 57 QDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSP 127 (269)
T ss_dssp SCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred cccchhhheecccccccCC---------CccccccCCceEEEEEEEecCCCCccHHHHHHHHHHHHhccccccccccccc
Confidence 6788999999999998763 33457999999999999998776 7788999999999999999999999987
Q ss_pred CCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeecccC
Q 036830 297 NSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSNL 376 (760)
Q Consensus 297 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 376 (760)
. .......+...+.++|+++|+||||+|.....+++..|++|+||+++.+
T Consensus 128 ~-----~~~~~~~a~~~a~~~gilvv~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 177 (269)
T d1gcia_ 128 S-----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------------------- 177 (269)
T ss_dssp S-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-------------------------
T ss_pred c-----ccchHHHHHHhhccCceEEEeccCCCCCCCccCccccCCceEEEEEccC-------------------------
Confidence 4 3345566678899999999999999998878888889999999986432
Q ss_pred CCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhhH
Q 036830 377 SRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVAG 456 (760)
Q Consensus 377 ~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~g 456 (760)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T d1gcia_ 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCCCCCCC
Q 036830 457 FRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPAGEKPA 536 (760)
Q Consensus 457 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~~~~ 536 (760)
+.++.||++||.. ||+|||.++.++.+. .
T Consensus 178 -----------------------------~~~~~~S~~G~~~--------di~Apg~~~~~~~~~--------------~ 206 (269)
T d1gcia_ 178 -----------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPG--------------S 206 (269)
T ss_dssp -----------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT--------------T
T ss_pred -----------------------------CCcccccCCCCCc--------eEEEeeecceeccCC--------------C
Confidence 4578999999976 999999999999876 7
Q ss_pred cceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCccccCC
Q 036830 537 TYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINPLKALN 613 (760)
Q Consensus 537 ~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~~~Al~ 613 (760)
.|..++|||||||+|||++|||+|++|+|++++||++|++||+++. ++..||+|+||+++|++
T Consensus 207 ~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~i~~~L~~tA~~~g--------------~~~~~G~G~ln~~~Avk 269 (269)
T d1gcia_ 207 TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred ceEecCCcchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC--------------CCCCcccCeEcHHHhcC
Confidence 8999999999999999999999999999999999999999999652 34568999999999986
|
| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Sphericase species: Bacillus sphaericus [TaxId: 1421]
Probab=100.00 E-value=7e-43 Score=371.56 Aligned_cols=285 Identities=28% Similarity=0.296 Sum_probs=215.5
Q ss_pred cccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSS 217 (760)
Q Consensus 140 ~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 217 (760)
+..+|..+ |+||+|+|||||||++||+|.+ ++...++|...... .....
T Consensus 15 ~~~aw~~~~~G~gv~V~ViDsGv~~~Hp~~~~---------------------------~~~~~~~~~~~~~~--~~~~~ 65 (309)
T d2ixta1 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVN---------------------------NVEQCKDFTGATTP--INNSC 65 (309)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEESSSSSSC--EETCC
T ss_pred ChhhhccCCCCCCeEEEEEccCCCCCChhHhc---------------------------cccccccccCCCCC--CCCCc
Confidence 67899888 9999999999999999999974 22223333322111 12445
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhCC-----CcEEEe
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHDG-----VDIISI 291 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g-----~dVIN~ 291 (760)
.|..+|||||||||+|...+ ....+.||||+|+|+.++++...+ +..++++.+++++++.+ ..|+|+
T Consensus 66 ~d~~gHGT~VAgiiaa~~~~-------~~~~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~v~~~ 138 (309)
T d2ixta1 66 TDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISM 138 (309)
T ss_dssp CCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cccccccccccccccccccc-------cchhhhhhhhhccceeeeeecCCCCcccccccccccccccccccccccccccc
Confidence 67889999999999987643 223457999999999999998776 78889999999998643 469999
Q ss_pred cccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC--ccCCCCceEEeccccccccceeeEEeCCCeeEeee
Q 036830 292 SIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT--VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGT 369 (760)
Q Consensus 292 SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~ 369 (760)
||+... .......++..+.++|+++|+||||++..... .++..+++++|++.+.........
T Consensus 139 s~~~~~-----~~~~~~~~~~~~~~~g~~~V~aaGn~~~~~~~~~~pa~~~~~~~v~~~~~~~~~~~~~----------- 202 (309)
T d2ixta1 139 SLGSSA-----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQNGTYR----------- 202 (309)
T ss_dssp CCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEETTEEE-----------
T ss_pred cccccc-----cccchhccccchhcCCceEEEEeccccccCCCcCCchhhhcccccccccccccccccc-----------
Confidence 999873 44555667788899999999999999866544 345568888888754321000000
Q ss_pred eeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceE
Q 036830 370 AISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYA 449 (760)
Q Consensus 370 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~ 449 (760)
T Consensus 203 -------------------------------------------------------------------------------- 202 (309)
T d2ixta1 203 -------------------------------------------------------------------------------- 202 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCC
Q 036830 450 EVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGI 529 (760)
Q Consensus 450 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~ 529 (760)
.........++++|+.. ....||||+|||.+|+++.+.
T Consensus 203 --------------------------------~~~~~~~~~~~~~~~~~--~~~~~vdi~apG~~~~s~~~~-------- 240 (309)
T d2ixta1 203 --------------------------------VADYSSRGYISTAGDYV--IQEGDIEISAPGSSVYSTWYN-------- 240 (309)
T ss_dssp --------------------------------ECTTSCCCCTTTTTSSS--CCTTCCCEEEECSSEEEECTT--------
T ss_pred --------------------------------ccccccccccccccccc--cCCCcceeecCCCceeeecCC--------
Confidence 00012234567777765 566789999999999999876
Q ss_pred CCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCc
Q 036830 530 PAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINP 608 (760)
Q Consensus 530 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~ 608 (760)
..|..++|||||||+|||++|||+|++|+|+++|||++|++||++++..+.. ......++.+|+|++|+
T Consensus 241 ------~~~~~~sGTS~AaP~VaG~~Ali~~~~p~lt~~~v~~~L~~tA~~~~~~~~~----g~~~~~~~~~g~G~~~v 309 (309)
T d2ixta1 241 ------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGY----GAAIGDDYASGFGFARV 309 (309)
T ss_dssp ------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBST----TCCSSSBTTTBTCBCCC
T ss_pred ------CcceeecCccchhHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCc----CCccCCCcccCCCEecC
Confidence 7899999999999999999999999999999999999999999987643311 12455678889999885
|
| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Proteinase K species: Fungus (Tritirachium album), strain limber [TaxId: 37998]
Probab=100.00 E-value=1.1e-42 Score=364.48 Aligned_cols=241 Identities=28% Similarity=0.343 Sum_probs=196.5
Q ss_pred cccccccC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCC
Q 036830 140 FNHKYHKA-ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSR 218 (760)
Q Consensus 140 ~~~~~~~~-G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 218 (760)
....|+.. |+||+|+|||||||++||+|.+. +...+.+ +..+.
T Consensus 21 ~~~~~~~~tG~Gv~VaViDsGid~~Hpdf~g~---------------------------~~~~~~~---------~~~~~ 64 (279)
T d2pwaa1 21 STYYYDESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTY---------YYSSR 64 (279)
T ss_dssp CCEECCTTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEES---------SSCSS
T ss_pred CcceecCCCCCCeEEEEECcCCCCCChhhcCC---------------------------ceeccCC---------CCCcc
Confidence 34567766 99999999999999999999741 0001111 12345
Q ss_pred CCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHhC-------CCcEEE
Q 036830 219 DPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIHD-------GVDIIS 290 (760)
Q Consensus 219 d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~-------g~dVIN 290 (760)
|.++|||||||||+|.. .|+||+|+|+.+|++.... ...+.+..+++++... +++|+|
T Consensus 65 d~~gHGT~VAgiia~~~--------------~G~a~~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~n 130 (279)
T d2pwaa1 65 DGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVAS 130 (279)
T ss_dssp CSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEE
T ss_pred cccCccccccccccccc--------------cccCCCccccceeeecCCcccccccccchhheeccccccccccccccee
Confidence 77899999999999864 5999999999999998765 7788899999998864 345999
Q ss_pred ecccCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC-ccCCCCceEEeccccccccceeeEEeCCCeeEeee
Q 036830 291 ISIGLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFT-VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGT 369 (760)
Q Consensus 291 ~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~ 369 (760)
+|||.. ..+.+..++.++.++|+++|+||||++..... .+...|++|+|||++.+
T Consensus 131 ~s~g~~------~~~~~~~~~~~~~~~gil~V~aaGN~~~~~~~~~p~~~~~vi~VgA~~~~------------------ 186 (279)
T d2pwaa1 131 LSLGGG------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY------------------ 186 (279)
T ss_dssp ECCCEE------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------------
T ss_pred ccCCCc------cccccchhhhhhhhCCcEEEEeCccccccccccCCccCCceEEeeeEeec------------------
Confidence 999987 34667777789999999999999999866433 55677999999986432
Q ss_pred eeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceE
Q 036830 370 AISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYA 449 (760)
Q Consensus 370 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~ 449 (760)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T d2pwaa1 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCC
Q 036830 450 EVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGI 529 (760)
Q Consensus 450 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~ 529 (760)
+.++.||++||.. ||+|||.+|+++++.
T Consensus 187 ------------------------------------g~~~~~S~~G~~~--------dv~APG~~i~s~~~~-------- 214 (279)
T d2pwaa1 187 ------------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIG-------- 214 (279)
T ss_dssp ------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETT--------
T ss_pred ------------------------------------CCCccccCCCCcc--------ccccccccccccccC--------
Confidence 5678999999976 999999999999876
Q ss_pred CCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCcccCc
Q 036830 530 PAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEINP 608 (760)
Q Consensus 530 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~vn~ 608 (760)
+.|..++|||||||+|||++|||+|++|.++++++|. |++||++. .....|+|++|+
T Consensus 215 ------~~~~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~-ll~ta~~~---------------~~~~~g~g~~n~ 271 (279)
T d2pwaa1 215 ------GSTRSISGTSMATPHVAGLAAYLMTLGKTTAASACRY-IADTANKG---------------DLSNIPFGTVNL 271 (279)
T ss_dssp ------TEEEEECSHHHHHHHHHHHHHHHHHTTSCCTTTHHHH-HHHHSEES---------------CCBSCCTTSCCE
T ss_pred ------CcccCCCcchhHHHHHHHHHHHHHHhCCCChHHHHHH-HHHhCcCC---------------CCCCCCCCChhh
Confidence 7899999999999999999999999999999888775 67788743 344579999986
|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease kp-43, N-terminal domain species: Bacillus sp. KSM-KP43 [TaxId: 109322]
Probab=100.00 E-value=5.4e-41 Score=358.35 Aligned_cols=295 Identities=25% Similarity=0.270 Sum_probs=218.7
Q ss_pred ccccccc-C--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCC
Q 036830 140 FNHKYHK-A--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGS 216 (760)
Q Consensus 140 ~~~~~~~-~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 216 (760)
++.+|.. + |+||+|||||||||++||+|.... + ...++...+.+... .+
T Consensus 10 ~~~~~~~~G~tG~Gv~VaIiDsGi~~~h~~~~~~~----------------~-----~~~~~~~~~~~~~~-------~~ 61 (318)
T d1wmda2 10 ADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHE----------------A-----FRGKITALYALGRT-------NN 61 (318)
T ss_dssp HHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCT----------------T-----TTTCEEEEEETTTT-------TC
T ss_pred chhHHHccCccccCeEEEEEcCCcCCCCcccccCc----------------c-----cCCcEEeecCCCCC-------CC
Confidence 5567774 6 999999999999999999996410 1 11233333333322 45
Q ss_pred CCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC---CCHHHHHHHHHHHHhCCCcEEEecc
Q 036830 217 SRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG---CSGAAILQAIDDAIHDGVDIISISI 293 (760)
Q Consensus 217 ~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~~g~dVIN~Sl 293 (760)
..|..||||||||||+|+... ..||||+|+|+.+|++...+ .....+..+++++...+++|+|+||
T Consensus 62 ~~d~~gHGT~vAgiiag~~~~-----------~~GvAp~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 130 (318)
T d1wmda2 62 ANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSW 130 (318)
T ss_dssp CCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCccceeeccccccc-----------cchhhhcccceeeeeeeecccccccchhhHHHHHHHHhcCCceeeccc
Confidence 668899999999999987532 26999999999999998755 3455678899999999999999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcc--CCCCceEEeccccccccceeeEEeCCCeeEeeeee
Q 036830 294 GLSNSEADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPFTVA--NTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAI 371 (760)
Q Consensus 294 G~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~--~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~ 371 (760)
|... ..........+...+.++++++|+|+||.|....... ...++++++.+.........
T Consensus 131 g~~~--~~~~~~~~~~~~~~~~~~~~~~v~aagn~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------- 193 (318)
T d1wmda2 131 GAAV--NGAYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFG--------------- 193 (318)
T ss_dssp CBCC--TTCCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGC---------------
T ss_pred cccc--ccccchhHHHHHHHHhhcceeeeeeeccccccccccccccccccccceeeccCcccccc---------------
Confidence 9884 3334455566667788999999999999997766544 34567777766432210000
Q ss_pred ecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEe
Q 036830 372 SLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEV 451 (760)
Q Consensus 372 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i 451 (760)
T Consensus 194 -------------------------------------------------------------------------------- 193 (318)
T d1wmda2 194 -------------------------------------------------------------------------------- 193 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCCCCCCCCC
Q 036830 452 GKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPDRPGGIPA 531 (760)
Q Consensus 452 ~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~ 531 (760)
........+..+|++||.. ....|||+.|||.+|+++........ ...
T Consensus 194 ----------------------------~~~~~~~~~~~~s~~G~~~--~~~~~~~~~a~G~~i~~~~~~~~~~~--~~~ 241 (318)
T d1wmda2 194 ----------------------------SYADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDS--SFW 241 (318)
T ss_dssp ----------------------------GGGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGG--GSS
T ss_pred ----------------------------cccccccccccccccCCCc--CCCcccceeecCceEEeccccccccC--ccc
Confidence 0011224567889999987 67899999999999999876543211 001
Q ss_pred CCCCCcceeeecccchhhhHHHHHHHHHHhC-----CCCCHHHHHHHHHhcccccCCCCCCcCCCCCCCCCCCCCCCccc
Q 036830 532 GEKPATYALRSGTSMACPHVTGAAAFIKSVR-----RKWTYSMIKSALMTTATVYDNTGTPLTNSSGNNANPHEMGAGEI 606 (760)
Q Consensus 532 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-----P~ls~~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~G~G~v 606 (760)
......|..++|||||||+|||++|||+|++ +.+++.+||++|++||+++. ...++..||||+|
T Consensus 242 ~~~~~~~~~~~GTS~AaP~VaG~~ALl~~~~p~~~~~~~~~~~i~~~l~~tA~~~~-----------~~~~~~~~G~G~l 310 (318)
T d1wmda2 242 ANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-----------LGYPNGNQGWGRV 310 (318)
T ss_dssp EEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS-----------SCSSCTTTTTCBC
T ss_pred cCCCcceeeccCcchhhHHHHHHHHHHHHHhHhhcCCCCCHHHHHHHHHhhCccCC-----------CCCCCCCeeecee
Confidence 1112567889999999999999999999975 46889999999999999763 3456778999999
Q ss_pred CccccCC
Q 036830 607 NPLKALN 613 (760)
Q Consensus 607 n~~~Al~ 613 (760)
|+.+||+
T Consensus 311 d~~~Al~ 317 (318)
T d1wmda2 311 TLDKSLN 317 (318)
T ss_dssp CHHHHHT
T ss_pred cHHHHhC
Confidence 9999986
|
| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Furin, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2e-39 Score=348.38 Aligned_cols=297 Identities=13% Similarity=0.159 Sum_probs=198.7
Q ss_pred cccccCCCcccccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccC
Q 036830 128 LAAAAKPAKNTWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCS 205 (760)
Q Consensus 128 ~g~~~~~~~~~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~ 205 (760)
|.++......+++..+|+.+ |+||+|||||||||++||+|.+.- ..+.+| .+.
T Consensus 14 w~l~~~~~~~in~~~aw~~g~~G~gv~VaViDtGv~~~Hpdl~~~~------------~~~~~~-------------~~~ 68 (334)
T d1p8ja2 14 WYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------DPGASF-------------DVN 68 (334)
T ss_dssp TTTSCTTSCSCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------CGGGCE-------------ETT
T ss_pred CCCCCCcccCCCHHHHHhcCCCCCCeEEEEEccCCCCCChhHhhcc------------ccCCCc-------------ccc
Confidence 34444444445688999998 999999999999999999997411 001111 011
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHh-C
Q 036830 206 RASTNKDNSGSSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIH-D 284 (760)
Q Consensus 206 ~~~~~~~~~~~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~ 284 (760)
+............|..+|||||||||+|...++. ...|+||+++++.+|+... ...+.+.++.++++ .
T Consensus 69 ~~~~~~~~~~~~~~~~gHGT~vAgiia~~~~n~~--------~~~g~a~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~ 137 (334)
T d1p8ja2 69 DQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLDG---EVTDAVEARSLGLNPN 137 (334)
T ss_dssp TTBSCCCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSSS---CCCHHHHHHHHTSCTT
T ss_pred CCCCccccccccccCccchhhhhhhhhhcccccc--------ccccccccccccchhhccc---cccchHHHHHHHhhhc
Confidence 1100001223455789999999999999864322 2369999999999999754 33455567777765 6
Q ss_pred CCcEEEecccCCCCCCCC--CC-----cHHHHHHHHHHhCCcEEEEecCCCCCCCCCcc----CCCCceEEecccccccc
Q 036830 285 GVDIISISIGLSNSEADY--MN-----DPIAIGALHAQQRGVVVICSAGNDGPYPFTVA----NTAPWLFTVAASTIDRD 353 (760)
Q Consensus 285 g~dVIN~SlG~~~~~~~~--~~-----~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~----~~~p~vitVgA~~~~~~ 353 (760)
+++++|+|||........ .. ..+..+...+..+|+++|+||||++....... ...+.+++|++.+..
T Consensus 138 ~~~~~n~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvV~AaGN~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 215 (334)
T d1p8ja2 138 HIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF-- 215 (334)
T ss_dssp TCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT--
T ss_pred CCcEEeCCCCCCCcCcccCCccchhhHHHHHHHHHHHhcCCceEEEecCCCCccCCCCCccccccccccccccccccC--
Confidence 899999999987421111 11 11233345666899999999999875543222 123455556553322
Q ss_pred ceeeEEeCCCeeEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEc
Q 036830 354 FQSTVLLGNGKAIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFIN 433 (760)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~ 433 (760)
T Consensus 216 -------------------------------------------------------------------------------- 215 (334)
T d1p8ja2 216 -------------------------------------------------------------------------------- 215 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCC-
Q 036830 434 DDEKIWPTERGILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPG- 512 (760)
Q Consensus 434 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG- 512 (760)
+..+.||++|+... .+..+||
T Consensus 216 ----------------------------------------------------g~~~~~s~~~~~~~------~~~~~~~~ 237 (334)
T d1p8ja2 216 ----------------------------------------------------GNVPWYSEACSSTL------ATTYSSGN 237 (334)
T ss_dssp ----------------------------------------------------SCCCTTCCBCTTCC------EEEECCCS
T ss_pred ----------------------------------------------------CceeeecccCCccc------cccccccc
Confidence 33445555555431 1333333
Q ss_pred ----ceEEeeecCCCCCCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCCCc
Q 036830 513 ----VAVLAAIVPRPDRPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGTPL 588 (760)
Q Consensus 513 ----~~I~Sa~~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~p~ 588 (760)
..+.+.... ..|..++|||||||+|||++|||+|++|+|++.|||++|++||++.+.....+
T Consensus 238 ~~~~~~~~~~~~~--------------~~~~~~sGTS~AaP~VaG~aALl~s~~p~lt~~~v~~~L~~TA~~~~~~~~~~ 303 (334)
T d1p8ja2 238 QNEKQIVTTDLRQ--------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDW 303 (334)
T ss_dssp TTSCCEEEEETTT--------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCC
T ss_pred cccccccccccCC--------------ccccCCCCccccchHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcccCCCCccc
Confidence 223333322 67889999999999999999999999999999999999999999876555444
Q ss_pred CCCCCCCCCCCCCCCcccCccccCCC
Q 036830 589 TNSSGNNANPHEMGAGEINPLKALNP 614 (760)
Q Consensus 589 ~~~~~~~~~~~~~G~G~vn~~~Al~~ 614 (760)
.........+..||+|+||+++||+.
T Consensus 304 ~~~~~~~~~~~~~G~G~lna~~Av~~ 329 (334)
T d1p8ja2 304 ATNGVGRKVSHSYGYGLLDAGAMVAL 329 (334)
T ss_dssp EECTTSCEEBTTTBTCBCCHHHHHHH
T ss_pred cccCCCcccCCCCcceEeCHHHHHHH
Confidence 44333445667899999999999974
|
| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Kexin, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.2e-38 Score=339.91 Aligned_cols=290 Identities=14% Similarity=0.139 Sum_probs=204.7
Q ss_pred cccccccccC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCC
Q 036830 138 TWFNHKYHKA--ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSG 215 (760)
Q Consensus 138 ~~~~~~~~~~--G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~ 215 (760)
+++..+|+.+ |+||+|||||||||++||+|.+.-. ..+.++|.+... ...
T Consensus 33 in~~~aw~~g~~G~gv~VaViDtGid~~Hp~l~~~~~-------------------------~~~~~~~~~~~~---~~~ 84 (339)
T d2id4a2 33 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC-------------------------AEGSWDFNDNTN---LPK 84 (339)
T ss_dssp CCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC-------------------------GGGCEETTTTBS---CCC
T ss_pred cCHHHHHhcCCCCCCcEEEEECcCcCCCChHHhcCcc-------------------------cccccccccCCC---ccC
Confidence 5578999988 9999999999999999999974210 001222322211 123
Q ss_pred CCCCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEecccC
Q 036830 216 SSRDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAIHDGVDIISISIGL 295 (760)
Q Consensus 216 ~~~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~ 295 (760)
...+..+|||||||+|+|....+ ..+.||||+|+|+.+++... .....++..++.++++. .+|+|+|||.
T Consensus 85 ~~~~~~~HGT~vag~iaa~~~~~--------~~~~Gvap~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~v~~~s~g~ 154 (339)
T d2id4a2 85 PRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSG-DITTEDEAASLIYGLDV-NDIYSCSWGP 154 (339)
T ss_dssp CCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTS-CCCHHHHHHHTTTTTTT-CSEEEECEES
T ss_pred CCcccccccceeeeccccccccc--------ccccccccccccceEEEeec-cccchHHHHHHHHHHhh-CCEEeccCCC
Confidence 44567899999999999876432 23479999999999999853 36777888888887765 4999999997
Q ss_pred CCCCCC--CCCcH-----HHHHHHHHHhCCcEEEEecCCCCCCCCCc--cC--CCCceEEeccccccccceeeEEeCCCe
Q 036830 296 SNSEAD--YMNDP-----IAIGALHAQQRGVVVICSAGNDGPYPFTV--AN--TAPWLFTVAASTIDRDFQSTVLLGNGK 364 (760)
Q Consensus 296 ~~~~~~--~~~~~-----~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~--~~--~~p~vitVgA~~~~~~~~~~~~~~~~~ 364 (760)
...... ..... ...+...+..+|+++|+||||.+...... +. ..+.+++|++++.
T Consensus 155 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~i~v~AaGN~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 220 (339)
T d2id4a2 155 ADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH-------------- 220 (339)
T ss_dssp CCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT--------------
T ss_pred CCCcccccCccchhHHHHHHHHHHHHhcCCcEEEecccCCccCCCccccccccccccccccccccc--------------
Confidence 641111 11111 22334566689999999999987543322 11 2234444443221
Q ss_pred eEeeeeeecccCCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCc
Q 036830 365 AIKGTAISLSNLSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERG 444 (760)
Q Consensus 365 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~ 444 (760)
T Consensus 221 -------------------------------------------------------------------------------- 220 (339)
T d2id4a2 221 -------------------------------------------------------------------------------- 220 (339)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEechhhHHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCceEEeeecCCCC
Q 036830 445 ILPYAEVGKVAGFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVAVLAAIVPRPD 524 (760)
Q Consensus 445 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~ 524 (760)
.+..+.||++|+.. ...++..+||..+.++....
T Consensus 221 ----------------------------------------~g~~~~~s~~~~~~----~~~~~~~~~g~~~~s~~~~~-- 254 (339)
T d2id4a2 221 ----------------------------------------KDLHPPYSEGCSAV----MAVTYSSGSGEYIHSSDING-- 254 (339)
T ss_dssp ----------------------------------------TSCCCTTCCCCTTE----EEEEECSBTTBCEEEECSTT--
T ss_pred ----------------------------------------cccccccccccCcc----ceeeeeeccccccceeccCC--
Confidence 24456677777643 44568888999998876541
Q ss_pred CCCCCCCCCCCCcceeeecccchhhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccCCCCC-CcCCCCCCCCCCCCCCC
Q 036830 525 RPGGIPAGEKPATYALRSGTSMACPHVTGAAAFIKSVRRKWTYSMIKSALMTTATVYDNTGT-PLTNSSGNNANPHEMGA 603 (760)
Q Consensus 525 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~ls~~~ik~~L~~TA~~~~~~g~-p~~~~~~~~~~~~~~G~ 603 (760)
..|..++|||||||||||++|||+|++|+|++.|||.+|+.||++++.... .+++.......+..|||
T Consensus 255 -----------~~~~~~sGTS~AtP~vaG~aALv~~~~P~lt~~~i~~~l~~tA~~~~~~~~~~~~~~~~~~~~~~~~G~ 323 (339)
T d2id4a2 255 -----------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGF 323 (339)
T ss_dssp -----------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTBT
T ss_pred -----------CccccCCCCcchHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccCCCCCccccccCCCCCcCCCccc
Confidence 568899999999999999999999999999999999999999998754322 11222234456778999
Q ss_pred cccCccccCCCce
Q 036830 604 GEINPLKALNPGL 616 (760)
Q Consensus 604 G~vn~~~Al~~~l 616 (760)
|+||+.+||+.+.
T Consensus 324 G~ln~~~Av~~a~ 336 (339)
T d2id4a2 324 GKIDAHKLIEMSK 336 (339)
T ss_dssp CBCCHHHHHHHHT
T ss_pred hhhCHHHHHHHHH
Confidence 9999999998543
|
| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]
Probab=99.96 E-value=3.9e-31 Score=285.70 Aligned_cols=310 Identities=17% Similarity=0.129 Sum_probs=183.0
Q ss_pred CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCCcccCccceecccccCCCCCCCCCCCCCCCCCCccchh
Q 036830 148 ASDIVIGVIDTGIWPESPSFNDQGMGEIPSRWKGVCMESPDFKKSHCNRKLIGARHCSRASTNKDNSGSSRDPLGHGTHT 227 (760)
Q Consensus 148 G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~g~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~d~~gHGThV 227 (760)
|+||+|||||||||++||+|.+ .|+.. +..+ ....+.+.++|+|||
T Consensus 23 G~Gv~VaViDtGvd~~H~dl~~--------~~~~~---~~~~-----------------------~~~~~~~~~g~~~~~ 68 (357)
T d1t1ga_ 23 GQGQCIAIIALGGGYDETSLAQ--------YFASL---GVSA-----------------------PQVVSVSVDGATNQP 68 (357)
T ss_dssp CTTCEEEEEESSCCCCHHHHHH--------HHHHT---TCCC-----------------------CCEEEEESTTCCCCC
T ss_pred CCCCEEEEEEcCCCCCcHHHHH--------HHhhc---CCCC-----------------------CCCceeCCCCCCCCC
Confidence 9999999999999999999963 11100 0000 012233567899999
Q ss_pred hhhcccccccccccccccCCcccccCCCCeEEEEEeccCCCCCHHHHHHHHHHHH---hCCCcEEEecccCCCC-CCCCC
Q 036830 228 ASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGGCSGAAILQAIDDAI---HDGVDIISISIGLSNS-EADYM 303 (760)
Q Consensus 228 AGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~---~~g~dVIN~SlG~~~~-~~~~~ 303 (760)
+|++++...... .....+.||||+|+|+.+|+... ...++.++++++ +.+++|||+|||.... .....
T Consensus 69 ~g~~~~~~~~~~----~d~~~~~GvAp~A~i~~~~~~~~----~~~~~~~i~~~~~~~~~~~~Vin~S~G~~~~~~~~~~ 140 (357)
T d1t1ga_ 69 TGDPNGPDGEVE----LDIEVAGALAPGAKIAVYFAPNT----DAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPAS 140 (357)
T ss_dssp CSCTTSTHHHHH----HHHHHHHHHSTTSEEEEEECCSS----HHHHHHHHHHHHHCTTTCCSEEEECCCEEGGGSCHHH
T ss_pred CCcccccccccc----CCcccceeecccCeEEEEecccC----CCchHHHHHHHHHhhhcCCeEEecccccCcCccccch
Confidence 888876542211 01223579999999999999743 334455566654 5689999999998631 01111
Q ss_pred CcHHHHHHHHHHhCCcEEEEecCCCCCCCCC--------ccCCCCceEEeccccccccceeeEEeCCCeeEeeeeeeccc
Q 036830 304 NDPIAIGALHAQQRGVVVICSAGNDGPYPFT--------VANTAPWLFTVAASTIDRDFQSTVLLGNGKAIKGTAISLSN 375 (760)
Q Consensus 304 ~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--------~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 375 (760)
...+......+..+|+++|+|+||+|..... .+...+++++|++....... +.. .....
T Consensus 141 ~~~~~~~~~~~~~~g~~vv~aagn~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~-~~~~~---- 207 (357)
T d1t1ga_ 141 IAAMNRAFLDAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASA--------GRI-ERETV---- 207 (357)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEECS--------SCE-EEEEE----
T ss_pred HHHHHHhhhhhccCCcEEEEEeccCCcccccccccccccccccCCcceeeeeecccCCC--------Ccc-cccee----
Confidence 2345566677889999999999999844322 22455788888875432110 000 00000
Q ss_pred CCCCceeeeEecccccccccccccccccccCCCCCccccchhhhhhhhcCceEEEEEcCCCCCCCCCCcccceEEechhh
Q 036830 376 LSRSKTYPLAYGKAIAVNSTLVSQASQCLYTTLYPMDTRGRKIAVAENVEAQGLIFINDDEKIWPTERGILPYAEVGKVA 455 (760)
Q Consensus 376 ~~~~~~~p~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~Gkk~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~p~~~i~~~~ 455 (760)
.. ..... ......+..
T Consensus 208 ----------~~-~~~~~---~~~~~g~s~-------------------------------------------------- 223 (357)
T d1t1ga_ 208 ----------WN-DGPDG---GSTGGGVSR-------------------------------------------------- 223 (357)
T ss_dssp ----------CB-CHHHH---CBCCCEECS--------------------------------------------------
T ss_pred ----------cc-ccccc---ccccCCccc--------------------------------------------------
Confidence 00 00000 000000000
Q ss_pred HHHHHHHHhcCCCCeEEEccCceeccCCCCCceecccCCCCCCCCCCcccCceeeCCce--EEeeecCCCCCCCCCCCCC
Q 036830 456 GFRIINYINSNKNPTATILPTVTIPRHRPAPVVAYFSSRGPGLPTENILKPDVAAPGVA--VLAAIVPRPDRPGGIPAGE 533 (760)
Q Consensus 456 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~--I~Sa~~~~~~~~~~~~~~~ 533 (760)
.... ..........+++.+++. .++.|||+.+++.. +++....
T Consensus 224 --------------------~~~~-p~~~~~~~~~~~~~~~~~--~~~~~pd~~~~~~~~~~~~~~~~------------ 268 (357)
T d1t1ga_ 224 --------------------IFPL-PSWQERANVPPSANPGAG--SGRGVPDVAGNADPATGYEVVID------------ 268 (357)
T ss_dssp --------------------SSCC-CGGGTTSCCCCCSSTTCC--CCCEECSEEEECCTTEEEEEEET------------
T ss_pred --------------------cccc-CcccccccccccccCCCC--CCceecceecccCCCCceEEecC------------
Confidence 0000 001124456677777776 88999999998654 4455444
Q ss_pred CCCcceeeecccchhhhHHHHHHHHHHhCCC---CCHHHHHHHHHhcccccCCCCCCcCCC----CCCCCCCCCCCCccc
Q 036830 534 KPATYALRSGTSMACPHVTGAAAFIKSVRRK---WTYSMIKSALMTTATVYDNTGTPLTNS----SGNNANPHEMGAGEI 606 (760)
Q Consensus 534 ~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~---ls~~~ik~~L~~TA~~~~~~g~p~~~~----~~~~~~~~~~G~G~v 606 (760)
+.|..++|||||||||||++|||+|+++. +...+++.+...+.+++.......... ...+.++..+|||++
T Consensus 269 --~~y~~~sGTSmAaP~VaG~~ALl~q~~~~~~g~~np~l~~~~~~~~~dit~g~~~~~~~~~~~~a~~G~d~~tG~G~~ 346 (357)
T d1t1ga_ 269 --GETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEVFHDITEGNNDIANRARIYQAGPGWDPCTGLGSP 346 (357)
T ss_dssp --TEEEEECSGGGHHHHHHHHHHHHHHHHSSCCCCCHHHHTTSCGGGEECCCSCBCCCSSSSCCSBCCSSSBTTTBTCEE
T ss_pred --CceeecCCchhHHHHHHHHHHHHHhhhcCCcCccCHHHHhhcccceecccccCCCCCCCCCcccCccCCCCCccCchh
Confidence 78999999999999999999999998743 233344443333333221100000000 124567888999999
Q ss_pred CccccCC
Q 036830 607 NPLKALN 613 (760)
Q Consensus 607 n~~~Al~ 613 (760)
|+.++++
T Consensus 347 n~~~~~~ 353 (357)
T d1t1ga_ 347 IGIRLLQ 353 (357)
T ss_dssp CHHHHHH
T ss_pred hHHHHHH
Confidence 9988876
|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Serine-carboxyl proteinase, SCP domain: Serine-carboxyl proteinase, SCP species: Pseudomonas sp., sedolisin [TaxId: 306]
Probab=99.95 E-value=2.4e-29 Score=273.34 Aligned_cols=124 Identities=15% Similarity=0.168 Sum_probs=95.1
Q ss_pred CCCCCccchhhhhcccccccccccccccCCcccccCCCCeEEEEEeccCCC-CCHHHHHHHHHHHHh-CCCcEEEecccC
Q 036830 218 RDPLGHGTHTASTAAGNYVSNAIYFGLAGGTARGGSPFSRIASYKACKEGG-CSGAAILQAIDDAIH-DGVDIISISIGL 295 (760)
Q Consensus 218 ~d~~gHGThVAGi~Ag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~-~g~dVIN~SlG~ 295 (760)
.+..+||||+++++++... ...+.||||+|+|+.++++.+.+ ....+++++|+|+++ .+++|||+|||.
T Consensus 65 ~~~~~~~~~~~~~~e~~ld---------~~~~~gvAp~a~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~Vis~S~g~ 135 (369)
T d1ga6a_ 65 SSNGDYSDDQQGQGEWDLD---------SQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGW 135 (369)
T ss_dssp CTTSCCCBCHHHHHHHHHH---------HHHHHHHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCE
T ss_pred CCCCCCCCCCCcceeeccc---------cccccccccCceEEEEEEeCCCCCcchHHHHHHHHHHHHcCCCceeeccccc
Confidence 3467899999999886541 22347999999999999998776 777899999999986 579999999998
Q ss_pred CCC--CCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-------------CccCCCCceEEeccccc
Q 036830 296 SNS--EADYMNDPIAIGALHAQQRGVVVICSAGNDGPYPF-------------TVANTAPWLFTVAASTI 350 (760)
Q Consensus 296 ~~~--~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-------------~~~~~~p~vitVgA~~~ 350 (760)
... ......+.+..++.++..+|++||+||||+|.... ..+...+++++|+++..
T Consensus 136 ~~~~~~~~~~~~~~~~a~~~a~~~Gi~vv~AaGN~G~~~~~~~~~~~~~~~~~~~pa~~~~v~~vg~t~~ 205 (369)
T d1ga6a_ 136 CEADANADGTLQAEDRIFATAAAQGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 205 (369)
T ss_dssp EHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred cccCCCcchHHHHHHHHHHHHHHCCCEEEEeCCCCcccCcCCCCCCccccccccccccCCceeeeeeecc
Confidence 631 11233456677788899999999999999985432 22345688999987543
|
| >d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Protease propeptides/inhibitors family: Subtilase propeptides/inhibitors domain: Subtilisin prosegment species: Bacillus subtilis [TaxId: 1423]
Probab=98.72 E-value=1.3e-08 Score=80.37 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=55.3
Q ss_pred CCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEeccceeeEEEEeCHHHHHHhcCCCCeEE
Q 036830 31 PKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYKHAFKGFSAILTDSEASALSGHDHVVS 110 (760)
Q Consensus 31 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~i~~L~~~p~V~~ 110 (760)
+++|||.||++... .....+.+++.+. ..++.+.|+ .||||+++|++++++.|+++|+|.+
T Consensus 1 e~~YIV~fK~~~~~-----------~~~~~~~~~v~~~-------gg~v~~~~~-~i~gfs~~l~~~~~~~L~~~p~V~y 61 (71)
T d1scjb_ 1 EKKYIVGFKQTMSA-----------MSSAKKKDVISQK-------GGKVEKQFK-YVNAAAATLDEKAVKELKKDPSVAY 61 (71)
T ss_dssp CEEEEEEECSSSSC-----------CSHHHHHHHHHTT-------TCEEEEECS-SSSEEEEEECHHHHHHHHTSTTEEE
T ss_pred CCcEEEEECCCCCh-----------HHHHHHHHHHHHc-------CCeEEEEEe-ecceEEEEeCHHHHHHHHcCCCceE
Confidence 36899999998654 0223444444432 456899997 5999999999999999999999999
Q ss_pred EEeCccccc
Q 036830 111 VFPDPVLQL 119 (760)
Q Consensus 111 V~~~~~~~~ 119 (760)
||+|+.++.
T Consensus 62 VE~D~v~~a 70 (71)
T d1scjb_ 62 VEEDHIAHE 70 (71)
T ss_dssp EEECCEEEE
T ss_pred EeCCcEEEc
Confidence 999998764
|
| >d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Protease propeptides/inhibitors family: Subtilase propeptides/inhibitors domain: Proteinase A inhibitor 1, POIA1 species: Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]
Probab=98.54 E-value=1e-07 Score=75.35 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=52.3
Q ss_pred CCcEEEEeCCCCCcccccccCcchHHHHHHHHHHHHhhCCCccccccceEEEec-cceeeEEEEeCHHHHHHhcCCCC--
Q 036830 31 PKPYIVYMGSSSRSNLIIQNGEDVEIAKLNHMQLLSSIIPSEESERLSLIHHYK-HAFKGFSAILTDSEASALSGHDH-- 107 (760)
Q Consensus 31 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~-~~~~g~s~~l~~~~i~~L~~~p~-- 107 (760)
.++|||.||+.... ...+.|..++..... .+.+.|. ..|+||+++++++.+++|+++|+
T Consensus 2 aG~YIVvlK~~~~~-----------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~GFaa~l~e~~l~~lr~~p~~~ 63 (72)
T d1v5ib1 2 AGKFIVIFKNDVSE-----------DKIRETKDEVIAEGG-------TITNEYNMPGMKGFAGELTPQSLTKFQGLQGDL 63 (72)
T ss_dssp CEEEEEEECTTCCH-----------HHHHHHHHHHHHHTC-------CCCEEEEETTEEEEEEEECHHHHHHHHHTBTTT
T ss_pred CccEEEEECCCCCH-----------HHHHHHHHHHHhcCC-------ceEEEEeeeeeeEEEEecCHHHHHHHHhCCCCC
Confidence 47899999997653 345566666655433 3556776 68999999999999999999665
Q ss_pred eEEEEeCc
Q 036830 108 VVSVFPDP 115 (760)
Q Consensus 108 V~~V~~~~ 115 (760)
|.+||+|+
T Consensus 64 V~yVE~D~ 71 (72)
T d1v5ib1 64 IDSIEEDH 71 (72)
T ss_dssp EEEEEECC
T ss_pred CceECCCC
Confidence 99999986
|
| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: E-set domains of sugar-utilizing enzymes domain: Sialidase, "linker" domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=96.20 E-value=0.031 Score=46.16 Aligned_cols=89 Identities=13% Similarity=0.077 Sum_probs=60.0
Q ss_pred cCCCcEEEeecccCceeEEEEEEEEecCCCCeE-EEEEEeCCCCcEEEEecceeEEeeCceEEEEEEEEEE--ecCCCCc
Q 036830 661 INYPSISISKLARQGAIRTVKRTVTNVGSPNAT-YISMVNAPSGLAVKVFPQKLTFVEGIIKLSFKASFFG--KEASSGY 737 (760)
Q Consensus 661 ln~ps~~~~~~~~~~~~~t~~rtv~N~~~~~~~-y~~~~~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~--~~~~~~~ 737 (760)
+..|++.+.- | ...+++++|+|.|+...+ -++.+..|.|=+++ +....+ ++|++++++++|+. +...+.|
T Consensus 6 ~t~p~~~v~p--G--~~~~~~vtVtN~g~~~~~~~~~~~~~P~GW~v~--~~~~~L-~pG~s~~~~~~Vt~p~~a~~G~Y 78 (103)
T d1w8oa1 6 FTIPDVALEP--G--QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQ--GSVEPL-MPGRQAKGQVTITVPAGTTPGRY 78 (103)
T ss_dssp EECCCEEECT--T--CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEE--EEECCB-CTTCEEEEEEEEECCTTCCCEEE
T ss_pred ccCcceeeCC--C--CeEEEEEEEEeCCCCceeeeeEEEcCCCCcccc--Ccceee-CCCCcEEEEEEEECCCCCCCceE
Confidence 4557776642 2 278899999999986654 57788899998875 444555 68999999999987 3344555
Q ss_pred eEEEEEEECCceEEEEEEEE
Q 036830 738 NYGSITWSDDRHSVRMMFAV 757 (760)
Q Consensus 738 ~~G~~~~~~~~~~v~~P~~~ 757 (760)
.. .++.+.+.......+.+
T Consensus 79 ~i-~~~a~~~~~~~s~t~tv 97 (103)
T d1w8oa1 79 RV-GATLRTSAGNASTTFTV 97 (103)
T ss_dssp EE-EEEEEETTEEEEEEEEE
T ss_pred EE-EEEEEeCCcceEEEEEE
Confidence 43 35556554444444443
|