Citrus Sinensis ID: 036841

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
MATKKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC
ccEEEEEcccccccHHHHHHHHHHcccccccccEEEEcccccccccccccccEEEEEEcccEEEEEEEEccccccEEEEEcccEEEEEEEcccccccEEEcEEEEcccccEEEEEEccccccccEEEEEEccccccccccccccEEEEEEEcccccccccccccccccccccHHHHHHHccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEEcccEEEccccHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEccccEEEEEEEccccEEEEEEcccHHHHHcccEEEEEEEccccccccccccccccccc
ccEEEEEcccccccHHHHHHHHHHccccccccccEEEcccEcccccccccccccEEEccccEEEEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEEccEEEccccEEEEEEEccccccccEEEEEEccccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccccccccccccEEEEEEcccEEccccHHHHHHHHHccccccccccccccccEEEccccccccccccccccccEEEEEEcccEEEEEEEcccEEEcccccEEEcccEEEEEEcccccccccccccccccccccEEcEEEEcccEEEEEEEEccccEEEEEEEccHHHHccccEEEEEEEccccccccccccccccccc
matkknvgeWWKQDVTEVRNELLrtgglpaasdaftingqpgdlypcsssetftltvDEGKTYLLRIINAAMDEMLFFSIanhdltvvgtdgaytnplttsyitispgqTLDVLLQanqnpnlyYMASSVYSTVVNLDFINNTTATAVLQyngnytpisspplpylpsrndtnsAFQFIGSLrslanedhpidvplditSSIFSTVslntlpcendnnscegpngtRLAASlnnqsfvepspIAILEAYYERIngvygenfpdfppylfnftaddlptilqipeqgtevkvLDYDSAVEINfqgtnlvagtshpihlhgySFFVVGfgfgnfdeekdplnynlidpplrtivdvpisgwatvrfrasnpgvwfmhchreehltwGMKTVFIVKngespqerllppppdvppc
matkknvgewwkqDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNgespqerllppppdvppc
MATKKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTpisspplpylpsRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSffvvgfgfgnfDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLppppdvppC
*******GEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPIS*****Y********SAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPC**********************SFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVK*******************
MATKKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGN*********PYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGE*******PPPPDVPPC
MATKKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC
MATKKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC
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MATKKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query412 2.2.26 [Sep-21-2011]
Q9FY79569 Laccase-14 OS=Arabidopsis yes no 0.961 0.695 0.520 1e-120
Q84J37565 Laccase-15 OS=Arabidopsis no no 0.941 0.686 0.538 1e-119
Q2QZ80583 Laccase-21 OS=Oryza sativ yes no 0.968 0.684 0.478 1e-110
Q5ZCW1577 Putative laccase-1 OS=Ory no no 0.968 0.691 0.481 1e-108
Q9FLB5565 Laccase-12 OS=Arabidopsis no no 0.970 0.707 0.473 1e-107
Q6Z8L2579 Putative laccase-9 OS=Ory no no 0.970 0.690 0.480 1e-106
Q9SIY8580 Laccase-5 OS=Arabidopsis no no 0.973 0.691 0.457 1e-105
Q941X2567 Laccase-3 OS=Oryza sativa no no 0.970 0.705 0.458 1e-103
Q8RYM9562 Laccase-2 OS=Oryza sativa no no 0.956 0.701 0.488 1e-103
Q8VZA1557 Laccase-11 OS=Arabidopsis no no 0.956 0.707 0.469 1e-101
>sp|Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1 Back     alignment and function desciption
 Score =  431 bits (1107), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/407 (52%), Positives = 275/407 (67%), Gaps = 11/407 (2%)

Query: 7   VGEWWKQD-VTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLL 65
           +GEWWK++ +  +  +  +TGG PA SD++TINGQPG LYPCS  ETF +TV  G+ YLL
Sbjct: 173 LGEWWKKENIMHIPGKANKTGGEPAISDSYTINGQPGYLYPCSKPETFKITVVRGRRYLL 232

Query: 66  RIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYY 125
           RIINA MDE LFF+IANH LTVV  DG Y     + Y+ I+PGQ++DVLL ANQ PN Y+
Sbjct: 233 RIINAVMDEELFFAIANHTLTVVAKDGFYLKHFKSDYLMITPGQSMDVLLHANQRPNHYF 292

Query: 126 MASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSL 185
           +A+  YS+     F + TT TA+LQY G+      P LPYLP  N T ++ +F    RS 
Sbjct: 293 VAARAYSSAFGAGF-DKTTTTAILQYKGDTLNRIKPILPYLPPYNRTEASTRFTNQFRS- 350

Query: 186 ANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAI 245
                P++VP+ I + +   +S+N + C +D+  C GP G R ++S+NN SFV PS + I
Sbjct: 351 ---QRPVNVPVKINTRLLYAISVNLMNC-SDDRPCTGPFGKRFSSSINNISFVNPS-VDI 405

Query: 246 LEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGT 305
           L AYY  I GV+ E+FP  PP  FN+T ++LP   +    GT+V VLDY+S+VE+  QGT
Sbjct: 406 LRAYYRHIGGVFQEDFPRNPPTKFNYTGENLPFPTRF---GTKVVVLDYNSSVELILQGT 462

Query: 306 NLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFR 365
            + A   HPIHLHGY+F+VVG GFGNFD  KDPL YNL+DPP  T V VP +GW  VRF 
Sbjct: 463 TVWASNIHPIHLHGYNFYVVGSGFGNFDRRKDPLRYNLVDPPEETTVGVPRNGWTAVRFV 522

Query: 366 ASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC 412
           A+NPGVW +HCH E H TWGM TVFIVK+G +   R++ PPPD+P C
Sbjct: 523 ANNPGVWLLHCHIERHATWGMNTVFIVKDGPTKSSRMVKPPPDLPSC 569
Lignin degradation and detoxification of lignin-derived products.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q84J37|LAC15_ARATH Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1 Back     alignment and function description
>sp|Q2QZ80|LAC21_ORYSJ Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZCW1|LAC1_ORYSJ Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1 Back     alignment and function description
>sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1 Back     alignment and function description
>sp|Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 Back     alignment and function description
>sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1 Back     alignment and function description
>sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
225462386 565 PREDICTED: laccase-14-like [Vitis vinife 0.978 0.713 0.636 1e-153
225464448 569 PREDICTED: putative laccase-9 [Vitis vin 0.978 0.708 0.626 1e-151
225470374 569 PREDICTED: putative laccase-9-like [Viti 0.978 0.708 0.628 1e-151
225464465 570 PREDICTED: putative laccase-9 [Vitis vin 0.978 0.707 0.632 1e-151
359495139 563 PREDICTED: laccase-14 [Vitis vinifera] 0.975 0.714 0.620 1e-151
359493233 569 PREDICTED: putative laccase-9-like [Viti 0.978 0.708 0.626 1e-150
359495151 569 PREDICTED: LOW QUALITY PROTEIN: laccase- 0.978 0.708 0.631 1e-150
359495153 670 PREDICTED: putative laccase-9-like [Viti 0.978 0.601 0.624 1e-150
147794525 584 hypothetical protein VITISV_027067 [Viti 0.975 0.688 0.623 1e-149
225464455 569 PREDICTED: laccase-14-like [Vitis vinife 0.978 0.708 0.621 1e-149
>gi|225462386|ref|XP_002264702.1| PREDICTED: laccase-14-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/407 (63%), Positives = 315/407 (77%), Gaps = 4/407 (0%)

Query: 7   VGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLR 66
           +G+WWK DV  VR+E L TG  P ASD+  INGQPGDLYPCS S+TF LTVD GKTYLLR
Sbjct: 162 LGQWWKSDVNAVRDEGLATGADPNASDSLLINGQPGDLYPCSKSDTFKLTVDHGKTYLLR 221

Query: 67  IINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYM 126
           IINAA+ E LFFSIA H +TVVGTDG+Y  PLT  YITI PGQT DVLL+ANQ+P+ YYM
Sbjct: 222 IINAALHEALFFSIAKHKMTVVGTDGSYMKPLTQDYITIYPGQTFDVLLEANQHPDHYYM 281

Query: 127 ASSVYSTV-VNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSL 185
           A+  YS      +F +NTT TA++QY G YTP S P LP+ P+ NDTN++ Q +  LRSL
Sbjct: 282 AAKTYSIAPAAQNFYDNTTTTAIVQYKGYYTPSSPPSLPHFPAYNDTNASVQVMAGLRSL 341

Query: 186 ANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAI 245
           AN +HP +VPL  ++ +  TVS+N+  C N  NSC GPNGTR +AS+NN SF  P+ I I
Sbjct: 342 ANAEHPSNVPLSPSTKLIYTVSVNSFLCPN--NSCAGPNGTRFSASINNISFQSPT-IDI 398

Query: 246 LEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGT 305
           L+AYY  I+GVYG+ FP  PP +F+FTAD LP   Q PE GTEV+VL+Y+S VEI FQGT
Sbjct: 399 LQAYYYNISGVYGDKFPSVPPLVFDFTADYLPLEYQTPENGTEVRVLEYNSTVEIVFQGT 458

Query: 306 NLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFR 365
           NLVAGT HP+HLHGYSF++VG+GFGNFD+ KDPL YNL+DPPL++ + VP +GWA +RF 
Sbjct: 459 NLVAGTHHPMHLHGYSFYLVGWGFGNFDKNKDPLRYNLVDPPLQSTISVPTNGWAAIRFE 518

Query: 366 ASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC 412
           ASNPGVWFMHCH E HLTWGM+T FIVKNG+ P+ ++LPPP D+PPC
Sbjct: 519 ASNPGVWFMHCHVERHLTWGMETAFIVKNGKHPKAQMLPPPSDMPPC 565

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225464448|ref|XP_002265713.1| PREDICTED: putative laccase-9 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225470374|ref|XP_002271411.1| PREDICTED: putative laccase-9-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225464465|ref|XP_002267373.1| PREDICTED: putative laccase-9 [Vitis vinifera] gi|147768529|emb|CAN60624.1| hypothetical protein VITISV_005954 [Vitis vinifera] gi|296081105|emb|CBI18299.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359495139|ref|XP_002264394.2| PREDICTED: laccase-14 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493233|ref|XP_003634547.1| PREDICTED: putative laccase-9-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359495151|ref|XP_003634927.1| PREDICTED: LOW QUALITY PROTEIN: laccase-14-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359495153|ref|XP_002264812.2| PREDICTED: putative laccase-9-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794525|emb|CAN64853.1| hypothetical protein VITISV_027067 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225464455|ref|XP_002265415.1| PREDICTED: laccase-14-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
TAIR|locus:2162677565 TT10 "TRANSPARENT TESTA 10" [A 0.944 0.688 0.512 5.1e-106
TAIR|locus:2184802569 LAC14 "laccase 14" [Arabidopsi 0.936 0.678 0.481 5.8e-98
TAIR|locus:2153469565 LAC12 "laccase 12" [Arabidopsi 0.946 0.690 0.439 1.4e-89
TAIR|locus:2063109580 LAC5 "laccase 5" [Arabidopsis 0.932 0.662 0.439 2.2e-89
TAIR|locus:2143563557 LAC11 "laccase 11" [Arabidopsi 0.934 0.691 0.442 6.7e-88
TAIR|locus:2194110581 LAC1 "laccase 1" [Arabidopsis 0.953 0.676 0.428 1.5e-83
TAIR|locus:2060879570 LAC3 "laccase 3" [Arabidopsis 0.927 0.670 0.434 1.9e-83
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.929 0.673 0.427 5e-83
TAIR|locus:2168128577 LAC17 "laccase 17" [Arabidopsi 0.949 0.677 0.416 3.2e-81
TAIR|locus:2154518566 LAC16 "laccase 16" [Arabidopsi 0.944 0.687 0.422 4.7e-80
TAIR|locus:2162677 TT10 "TRANSPARENT TESTA 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
 Identities = 207/404 (51%), Positives = 266/404 (65%)

Query:     7 VGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLR 66
             +GEWWK+DV EV  E +RTGG P  SDA TING PG LYPCS S+TF LTV++GKTY +R
Sbjct:   159 LGEWWKRDVREVVEEFVRTGGAPNVSDALTINGHPGFLYPCSKSDTFHLTVEKGKTYRIR 218

Query:    67 IINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPN-LYY 125
             ++NAAM+  LFF+IANH LTVV  DG Y  P+  +YITISPG+TLD+LL A+Q+P   YY
Sbjct:   219 MVNAAMNLPLFFAIANHSLTVVSADGHYIKPIKATYITISPGETLDMLLHADQDPERTYY 278

Query:   126 MASSVYSTVVNLDFINNTTATAVLQYNGNY---TXXXXXXXXXXXXRNDTNSAFQFIGSL 182
             MA+  Y +  N+DF NN+T   +L Y  +    T             NDT++AF F   +
Sbjct:   279 MAARAYQSG-NIDF-NNSTTIGILSYTSSCKAKTSSFSGYYPTLPFYNDTSAAFGFFTKI 336

Query:   183 RSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSP 242
             + L +      VP+ I+  I +TVS+N   C    NSCEGPNG+RLAAS+NN SFV PS 
Sbjct:   337 KCLFSGQ----VPVQISRRIITTVSINLRMCPQ--NSCEGPNGSRLAASMNNISFVTPSH 390

Query:   243 IAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINF 302
             + IL+AYY  I GVYG  FP+FPP +FNFTA++ P  L+ P   TEVKV+++   VE+  
Sbjct:   391 VDILKAYYYHIKGVYGTRFPEFPPLIFNFTAENQPLFLETPRLATEVKVIEFGQVVELVI 450

Query:   303 QGTNLVAG-TSHPIHLHGYSXXXXXXXXXXXD-EEKDPLN-YNLIDPPLRTIVDVPISGW 359
             QGT+LV G   HP+HLHG+S           +  E+DP + YNL DPP +  + VP +GW
Sbjct:   451 QGTSLVGGGLDHPMHLHGFSFYVVGVGFGNYNISEEDPSSRYNLYDPPYKNTMTVPRNGW 510

Query:   360 ATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLL 403
               +RF A NPGVWFMHCH + H TWGM  VFIVKNG  P +++L
Sbjct:   511 IAIRFVADNPGVWFMHCHLDRHQTWGMNVVFIVKNGREPNQQIL 554
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009809 "lignin biosynthetic process" evidence=IMP
GO:0010023 "proanthocyanidin biosynthetic process" evidence=IMP
GO:0046688 "response to copper ion" evidence=IEP
TAIR|locus:2184802 LAC14 "laccase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063109 LAC5 "laccase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194110 LAC1 "laccase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168128 LAC17 "laccase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FY79LAC14_ARATH1, ., 1, 0, ., 3, ., 20.52080.96110.6959yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.766
3rd Layer1.10.3.20.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00007679001
SubName- Full=Chromosome undetermined scaffold_198, whole genome shotgun sequence; (480 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
TIGR03389539 TIGR03389, laccase, laccase, plant 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 1e-48
PLN02604566 PLN02604, PLN02604, oxidoreductase 4e-47
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 6e-40
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 8e-40
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 1e-33
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 1e-32
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 4e-26
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 1e-23
PLN02835539 PLN02835, PLN02835, oxidoreductase 2e-23
PLN02991543 PLN02991, PLN02991, oxidoreductase 3e-22
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 5e-22
PLN02792536 PLN02792, PLN02792, oxidoreductase 2e-15
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 2e-09
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 7e-08
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 9e-06
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 1e-04
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  545 bits (1406), Expect = 0.0
 Identities = 217/405 (53%), Positives = 272/405 (67%), Gaps = 7/405 (1%)

Query: 8   GEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRI 67
           GEWW  DV  V N+  +TGG P  SDA+TING PG LY CSS +TF LTV+ GKTYLLRI
Sbjct: 142 GEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRI 201

Query: 68  INAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMA 127
           INAA+++ LFF+IANH LTVV  D  YT P  T  I I PGQT +VLL A+Q+P  Y+MA
Sbjct: 202 INAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMA 261

Query: 128 SSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSRNDTNSAFQFIGSLRSLAN 187
           +  Y         +NTT TA+LQY G     + P LP LP+ NDT +A  F   LRSL +
Sbjct: 262 ARPYMDAPGA--FDNTTTTAILQYKGTSNS-AKPILPTLPAYNDTAAATNFSNKLRSLNS 318

Query: 188 EDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILE 247
             +P +VP+ I   +F T+ L   PC N  N+C+GPNGTR AAS+NN SFV P+  A+L+
Sbjct: 319 AQYPANVPVTIDRRLFFTIGLGLDPCPN--NTCQGPNGTRFAASMNNISFVMPT-TALLQ 375

Query: 248 AYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNL 307
           A+Y  I+GV+  +FP  PP  FN+T  +LP  L     GT+V  L ++S VE+  Q T++
Sbjct: 376 AHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTT-NGTKVVRLKFNSTVELVLQDTSI 434

Query: 308 VAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRAS 367
           +   +HPIHLHGY+FFVVG GFGNFD +KDP  +NL+DPP R  V VP  GWA +RF A 
Sbjct: 435 LGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVAD 494

Query: 368 NPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC 412
           NPGVWFMHCH E H TWG+K  F+V NG+ P + LLPPP D+P C
Sbjct: 495 NPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 412
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02792536 oxidoreductase 100.0
PLN02991543 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02835539 oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
PLN02604566 oxidoreductase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
PLN02191574 L-ascorbate oxidase 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10883471 FtsI repressor; Provisional 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 100.0
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.97
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.8
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.54
PLN02604 566 oxidoreductase 99.01
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.87
TIGR03389 539 laccase laccase, plant. Members of this protein fa 98.71
TIGR03388 541 ascorbase L-ascorbate oxidase, plant type. Members 98.62
PLN02835 539 oxidoreductase 98.42
PLN02792 536 oxidoreductase 98.34
PLN02354 552 copper ion binding / oxidoreductase 98.33
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.3
PLN02191 574 L-ascorbate oxidase 98.28
TIGR03390 538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 98.26
PLN02991 543 oxidoreductase 98.21
PRK10883 471 FtsI repressor; Provisional 98.2
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 98.15
TIGR01480 587 copper_res_A copper-resistance protein, CopA famil 98.06
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 97.95
PLN02168 545 copper ion binding / pectinesterase 97.95
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 97.86
PRK10965523 multicopper oxidase; Provisional 97.79
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.79
PLN00044 596 multi-copper oxidase-related protein; Provisional 97.71
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.49
PRK02888635 nitrous-oxide reductase; Validated 97.13
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 97.09
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.85
PRK02710119 plastocyanin; Provisional 96.46
COG2132451 SufI Putative multicopper oxidases [Secondary meta 96.03
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 95.98
COG4454158 Uncharacterized copper-binding protein [Inorganic 95.95
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 95.88
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 95.56
TIGR0265783 amicyanin amicyanin. Members of this family are am 94.79
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 94.6
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 94.16
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 94.1
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 93.47
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 93.43
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 93.03
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 92.39
PF14344122 DUF4397: Domain of unknown function (DUF4397) 88.78
COG3794128 PetE Plastocyanin [Energy production and conversio 88.09
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 86.72
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 84.7
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 84.06
COG4454158 Uncharacterized copper-binding protein [Inorganic 80.78
>TIGR03389 laccase laccase, plant Back     alignment and domain information 
Probab=100.00  E-value=8e-75  Score=595.11  Aligned_cols=402  Identities=54%  Similarity=0.967  Sum_probs=315.0

Q ss_pred             eeEEcccCCCChHHHHHHHHhcCCCCCCCceEEEcCccCCCCCCCCCCceEEEEecCCEEEEEEEecccCceEEEEEcCc
Q 036841            4 KKNVGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANH   83 (412)
Q Consensus         4 ~i~l~Dw~h~~~~~~~~~~~~~g~~~~~~d~~lING~~g~~~~c~~~~~~~~~v~~Gk~yRlRlINa~~~~~~~~sidgh   83 (412)
                      +|+|+||||++..+++..++..+..+.++|++|||||.+..++|+....+.|+|++||+|||||||+|+.+.+.|+||||
T Consensus       138 ~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH  217 (539)
T TIGR03389       138 PIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANH  217 (539)
T ss_pred             EEEecccccCCHHHHHHHHHhcCCCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCC
Confidence            68999999999998887777777667789999999997777889887788999999999999999999999999999999


Q ss_pred             cEEEEeeCCCccCceEEeEEEECCCceEEEEEEecCCCceeEEEeecccccccccccCCccEEEEEEEcCCCCCCCCCCC
Q 036841           84 DLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTPISSPPL  163 (412)
Q Consensus        84 ~m~VIa~DG~~v~P~~v~~l~l~~GqRydViv~~~~~~g~y~ir~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~  163 (412)
                      +|+|||+||.+++|+.+++|.|++||||||+|++++++|+||||+.+...|.+  .+.+....|||+|.++.... .+..
T Consensus       218 ~~~VIa~DG~~~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i~~~~~~~~~~--~~~~~~~~ail~Y~~~~~~~-~p~~  294 (539)
T TIGR03389       218 TLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARPYMDAPG--AFDNTTTTAILQYKGTSNSA-KPIL  294 (539)
T ss_pred             eEEEEEeCCcccCceEeCeEEecCCCEEEEEEECCCCCceEEEEEeccccCcc--CCCCcceEEEEEECCCCCCC-CCCC
Confidence            99999999999999999999999999999999999988999999987644431  12356789999998864322 1222


Q ss_pred             CCCCCCCCccchhhhhhhcccCCCCCCCCCCCCCcceEEEEEeccCcccCCCCCCCccCCCCceeeeeeccccccCCCch
Q 036841          164 PYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPI  243 (412)
Q Consensus       164 p~~p~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~N~~~~~~~~~~  243 (412)
                      +..|.+++.+....+...++.+..+.+|..+|..+++++.+.+.+.......  ..+...++..+.|.||+++|..| .+
T Consensus       295 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~w~in~~s~~~p-~~  371 (539)
T TIGR03389       295 PTLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPN--NTCQGPNGTRFAASMNNISFVMP-TT  371 (539)
T ss_pred             CCCCCCCchhhhhHHHhhcccccccCCCCCCCCCCCeEEEEEeecccccCcc--cccccCCCcEEEEEECCcccCCC-Cc
Confidence            2233333322222222334444333334445556777777666543211000  00112245567899999999888 77


Q ss_pred             hHHHHHHhhccccccCCCCCCCCccccCCCCCCCCCccCCCCCceEEEeeCCCEEEEEEecCCcCCCCCCceeecCceEE
Q 036841          244 AILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFF  323 (412)
Q Consensus       244 ~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHG~~F~  323 (412)
                      |+|.+.+.+++|.+..++++.+|++|+.++...+.++. .+.+.+++.+++|++|||+|+|........||||||||+||
T Consensus       372 p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~  450 (539)
T TIGR03389       372 ALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLF-TTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFF  450 (539)
T ss_pred             chhhhhhcccCCccccCCccCCCccccCCCCCcccccc-cccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceE
Confidence            78877766666776667888889888765543222332 23577889999999999999997422345899999999999


Q ss_pred             EEeecCCCCCCCCCCCCCCCCCCCceeeEEeCCCcEEEEEEEcCCceeEEEEeehhHhHhcCceEEEEEeCCCCCCCCCC
Q 036841          324 VVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLL  403 (412)
Q Consensus       324 Vl~~g~g~~~~~~~~~~~~~~np~~rDTv~vp~~~~~~vr~~~~npG~w~~HCHi~~H~~~GM~~~~~V~~~~~~~~~~~  403 (412)
                      ||++|.|.|+.......+|+.||++|||+.|+++||++|||++||||.|+|||||+||+..||+++|.+.++++..+.++
T Consensus       451 Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~  530 (539)
T TIGR03389       451 VVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLL  530 (539)
T ss_pred             EEEeccCCCCcccCccccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccC
Confidence            99999999986544457899999999999999999999999999999999999999999999999999998888889999


Q ss_pred             CCCCCCCCC
Q 036841          404 PPPPDVPPC  412 (412)
Q Consensus       404 ~~p~~~~~c  412 (412)
                      ++|+.+|.|
T Consensus       531 ~~p~~~~~c  539 (539)
T TIGR03389       531 PPPSDLPSC  539 (539)
T ss_pred             CCCccCCCC
Confidence            999999999

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>PF14344 DUF4397: Domain of unknown function (DUF4397) Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 6e-23
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 1e-18
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 5e-17
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 1e-16
1gyc_A499 Crystal Structure Determination At Room Temperature 2e-15
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 3e-15
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 8e-15
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 2e-14
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 5e-13
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 8e-13
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 1e-12
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 2e-12
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 9e-12
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 9e-12
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 1e-11
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 4e-11
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 2e-09
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 2e-09
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 8e-09
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 5e-07
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 6e-08
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 9e-08
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 1e-07
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 1e-07
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 1e-07
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 2e-07
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 1e-06
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 4e-07
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 9e-07
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 5e-05
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 163/421 (38%), Gaps = 50/421 (11%)
Query: 7   VGEWWKQDVTE----VRNELLRTGGLP-------------AASDAFTINGQPGDLYPCSS 49
           + +WW Q + +    + ++ +R  G P             + +  +  N +P  L    S
Sbjct: 141 LSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSES 200
Query: 50  SETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQ 109
              +   V   KTY +RI +      L F+I NH L VV  DG Y  P  TS I I  G+
Sbjct: 201 CAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGE 260
Query: 110 TLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGN-YTXXXXXXXXXXXX 168
           +  VL+  +QNP+  Y  S            N      +L Y  N  +            
Sbjct: 261 SYSVLITTDQNPSENYWVS----VGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPA 316
Query: 169 RNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRL 228
            +D + +  F   + +      P   P+     IF   + N +            NG  +
Sbjct: 317 WDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLLNTQNVI------------NG-YV 360
Query: 229 AASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTAD-DLPTILQIPEQGT 287
             ++N+ S   P P   L A    +   + +N P   P +F    D D P   +    G 
Sbjct: 361 KWAINDVSLALP-PTPYLGAMKYNLLHAFDQNPP---PEVFPEDYDIDTPPTNEKTRIGN 416
Query: 288 EVKVLDYDSAVEINFQGTNLVA---GTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLI 344
            V        V++  Q  N++      +HP HLHG+              E++  + NL 
Sbjct: 417 GVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEES-SLNLK 475
Query: 345 DPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVF---IVKNGESPQER 401
           +PPLR  V +   GW  +RF A NPGVW  HCH E HL  GM  VF   + K G  P + 
Sbjct: 476 NPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKA 535
Query: 402 L 402
           L
Sbjct: 536 L 536
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 1e-133
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 1e-115
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 1e-113
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 1e-110
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-109
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 1e-109
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 1e-107
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 1e-104
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 3e-36
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 1e-07
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 2e-32
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 2e-08
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 1e-16
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 5e-16
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 1e-14
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 2e-12
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 5e-14
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 1e-12
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 2e-12
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 2e-10
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-11
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-07
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 3e-07
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-04
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 3e-04
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 1e-11
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 1e-11
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 2e-11
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 4e-10
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 5e-11
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 5e-11
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 6e-10
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 7e-09
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 3e-08
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 2e-08
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 2e-06
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 2e-08
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 8e-08
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 6e-08
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 1e-06
2zoo_A442 Probable nitrite reductase; electron transfer, ele 9e-08
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 3e-07
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 2e-06
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 6e-05
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  392 bits (1010), Expect = e-133
 Identities = 110/428 (25%), Positives = 164/428 (38%), Gaps = 52/428 (12%)

Query: 7   VGEWWKQDVTEVRNELLRTG-GLPAASDAFTING----------------QPGDLYPCSS 49
           + +WW Q + +    L               +NG                +P  L    S
Sbjct: 141 LSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSES 200

Query: 50  SETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQ 109
              +   V   KTY +RI +      L F+I NH L VV  DG Y  P  TS I I  G+
Sbjct: 201 CAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGE 260

Query: 110 TLDVLLQANQNPNL-YYMASSVYSTVVNLDFINNTTATAVLQYNGNYT-PISSPPLPYLP 167
           +  VL+  +QNP+  Y+++    +        N      +L Y  N    + + P P  P
Sbjct: 261 SYSVLITTDQNPSENYWVSVGTRARH-----PNTPPGLTLLNYLPNSVSKLPTSPPPQTP 315

Query: 168 SRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTR 227
           + +D + +  F   + +      P   P+     IF   + N                  
Sbjct: 316 AWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLLNTQN-------------VINGY 359

Query: 228 LAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGT 287
           +  ++N+ S   P     L A    +   + +N P  P         D P   +    G 
Sbjct: 360 VKWAINDVSLALPP-TPYLGAMKYNLLHAFDQNPP--PEVFPEDYDIDTPPTNEKTRIGN 416

Query: 288 EVKVLDYDSAVEINFQGTNLVA---GTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLI 344
            V        V++  Q  N++      +HP HLHG+ F+V+G+G G F  E +  + NL 
Sbjct: 417 GVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE-EESSLNLK 475

Query: 345 DPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLP 404
           +PPLR  V +   GW  +RF A NPGVW  HCH E HL  GM  VF         E++  
Sbjct: 476 NPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-----EKVGR 530

Query: 405 PPPDVPPC 412
            P     C
Sbjct: 531 IPTKALAC 538
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 99.97
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.96
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.96
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.95
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.94
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.94
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.93
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.93
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.92
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.9
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.89
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.89
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.86
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.85
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.84
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.82
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.79
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.79
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.75
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.74
2zoo_A442 Probable nitrite reductase; electron transfer, ele 99.74
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.72
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.71
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.71
2dv6_A 447 Nitrite reductase; electron transfer, reduction, d 99.69
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.56
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.54
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.48
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 99.35
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.27
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.2
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.15
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.1
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 98.92
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 98.92
2xu9_A 439 Laccase; oxidoreductase, multicopper oxidases; 1.5 98.9
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 98.9
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 98.88
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.87
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.82
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 98.81
1aoz_A 552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 98.77
3pxl_A 499 Laccase; 4-copper protein, metal-binding, oxidored 98.75
3t6v_A 495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 98.71
1hfu_A 503 Laccase 1; oxidoreductase, blue multi-copper oxida 98.7
1v10_A 521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 98.69
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.66
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.66
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.63
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.49
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.47
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.47
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.37
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.36
2q9o_A 559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 98.35
2uxt_A 451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 98.23
3sqr_A 580 Laccase; multicopper oxidase, glycosylation, oxido 98.21
1zpu_A 534 Iron transport multicopper oxidase FET3; ferroxida 98.17
3aw5_A 448 Multicopper oxidase; beta barrel, oxidoreductase; 98.16
3zx1_A 481 Oxidoreductase, putative; laccase, metallo-oxidase 98.14
2cal_A154 Rusticyanin; iron respiratory electron transport c 98.11
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 98.1
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.07
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 98.0
3abg_A 534 Bilirubin oxidase; cleavage on PAIR of basic resid 97.97
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.94
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 97.68
2wsd_A 513 Spore coat protein A; oxidoreductase, multi-copper 97.6
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 97.53
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 97.48
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 97.48
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.39
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.13
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 97.0
3c75_A132 Amicyanin; copper proteins, electron transfer comp 96.96
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.95
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.91
3gyr_A 612 PHS, phenoxazinone synthase; metalloprotein, lacca 96.89
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 96.83
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.46
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 96.24
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 95.55
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 95.51
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 95.11
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.06
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 95.02
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 94.95
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 94.63
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 94.48
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 94.28
2cal_A154 Rusticyanin; iron respiratory electron transport c 93.77
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 93.69
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 93.69
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 93.6
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 93.55
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 93.23
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 92.48
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 91.73
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 91.08
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 90.62
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 90.38
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 88.49
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 88.09
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 87.38
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 86.06
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 85.96
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 82.57
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 82.22
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-67  Score=541.33  Aligned_cols=376  Identities=28%  Similarity=0.486  Sum_probs=283.2

Q ss_pred             eeEEcccCCCChHHHHHHHHhcC-CCCCCCceEEEcCccCCCCCCC-------------CC-----CceEEEEecCCEEE
Q 036841            4 KKNVGEWWKQDVTEVRNELLRTG-GLPAASDAFTINGQPGDLYPCS-------------SS-----ETFTLTVDEGKTYL   64 (412)
Q Consensus         4 ~i~l~Dw~h~~~~~~~~~~~~~g-~~~~~~d~~lING~~g~~~~c~-------------~~-----~~~~~~v~~Gk~yR   64 (412)
                      +|+|+||||++..+++..+.... .....++++||||+ + .++|+             ..     ..+.++|++||+||
T Consensus       138 ~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~-~-~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~R  215 (552)
T 1aoz_A          138 NLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGR-G-QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYR  215 (552)
T ss_dssp             EEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTB-C-CSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEE
T ss_pred             eEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCc-c-ccCcccCcccccccccccccCCCCCCceEEEEcCCCEEE
Confidence            68999999999888765442211 22246899999999 4 34443             21     12479999999999


Q ss_pred             EEEEecccCceEEEEEcCccEEEEeeCCCccCceEEeEEEECCCceEEEEEEe-cCCCceeEEEeecccccccccccCCc
Q 036841           65 LRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQA-NQNPNLYYMASSVYSTVVNLDFINNT  143 (412)
Q Consensus        65 lRlINa~~~~~~~~sidgh~m~VIa~DG~~v~P~~v~~l~l~~GqRydViv~~-~~~~g~y~ir~~~~~~~~~~~~~~~~  143 (412)
                      |||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++ ++.+|+|||++.... |.    ....
T Consensus       216 lRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~----~~~~  290 (552)
T 1aoz_A          216 IRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH----PNTP  290 (552)
T ss_dssp             EEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC----CCSC
T ss_pred             EEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC----CCCc
Confidence            99999999999999999999999999999999999999999999999999999 556799999998654 22    1345


Q ss_pred             cEEEEEEEcCCCCCC-CCCCCCCCCCCCCccchhhhhhhcccCCCCCCCCCCCCCcceEEEEEeccCcccCCCCCCCccC
Q 036841          144 TATAVLQYNGNYTPI-SSPPLPYLPSRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEG  222 (412)
Q Consensus       144 ~~~ail~y~~~~~~~-~~~~~p~~p~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (412)
                      ...|+|+|.+..... +....|..|.+++....  +...++.+.... +...+..+++++.+.+..+..           
T Consensus       291 ~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~--~~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-----------  356 (552)
T 1aoz_A          291 PGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRS--KNFTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-----------  356 (552)
T ss_dssp             CEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHH--HHHHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-----------
T ss_pred             cEEEEEEECCCCCCCCCCCCCCCCCcccccccc--ccccccccccCC-CCCCCCCCcEEEEEEEeeccC-----------
Confidence            789999998765311 11223334444443222  222233332222 334566788998887654321           


Q ss_pred             CCCceeeeeeccccccCCCchhHHHHHHhhccccccCCCCCCCCc-cccCCCCCCCCCccCCCCCceEEEeeCCCEEEEE
Q 036841          223 PNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPY-LFNFTADDLPTILQIPEQGTEVKVLDYDSAVEIN  301 (412)
Q Consensus       223 ~~g~~~~~~~N~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~  301 (412)
                       + ....|+|||++|..+ ..|+|.+.+.+.+|.+..++++.++. .|+.+.   +..+...|.+++++.++.|++|||+
T Consensus       357 -~-~~~~w~iNg~s~~~p-~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~t~~~~~~~g~~v~iv  430 (552)
T 1aoz_A          357 -N-GYVKWAINDVSLALP-PTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT---PPTNEKTRIGNGVYQFKIGEVVDVI  430 (552)
T ss_dssp             -T-TEEEEEETTEEECCC-SSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTS---CCCCTTCEEECCCEEECTTCEEEEE
T ss_pred             -C-CeEEEEECCCccCCC-CCCHHHHHhhcCccccccCCCcccccccccccc---ccccccccccceEEEecCCCEEEEE
Confidence             1 245799999999988 77888887777778776566543331 233221   1112223467778999999999999


Q ss_pred             EecCCcCC---CCCCceeecCceEEEEeecCCCCCCCCCCCCCCCCCCCceeeEEeCCCcEEEEEEEcCCceeEEEEeeh
Q 036841          302 FQGTNLVA---GTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHR  378 (412)
Q Consensus       302 l~n~~~~~---~~~Hp~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~np~~rDTv~vp~~~~~~vr~~~~npG~w~~HCHi  378 (412)
                      |+|.+.+.   ...||||||||+||||++|.|.|++ .+...+|+.+|+|||||.|++++|++|||++||||.|+|||||
T Consensus       431 i~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi  509 (552)
T 1aoz_A          431 LQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHI  509 (552)
T ss_dssp             EEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESS
T ss_pred             EeCCcccccccCCCCCEEEcCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeee
Confidence            99975322   5679999999999999999998876 3456789999999999999999999999999999999999999


Q ss_pred             hHhHhcCceEEEEEeCCCCCCCCCCCCCCCCCCC
Q 036841          379 EEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC  412 (412)
Q Consensus       379 ~~H~~~GM~~~~~V~~~~~~~~~~~~~p~~~~~c  412 (412)
                      +||++.|||++|.|.+     ++++++|++++.|
T Consensus       510 ~~H~~~GM~~~~~~~~-----~~~~~~P~~~~~C  538 (552)
T 1aoz_A          510 EPHLHMGMGVVFAEGV-----EKVGRIPTKALAC  538 (552)
T ss_dssp             HHHHHTTCEEEEEECG-----GGCCCCCHHHHSS
T ss_pred             hhHhhCCCeEEEEeCc-----hhhccCCcchhhh
Confidence            9999999999998853     3677789999998
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 412
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 4e-38
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 2e-34
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 2e-32
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 2e-31
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 6e-29
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 3e-28
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 7e-27
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 2e-23
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 1e-22
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 3e-21
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 2e-19
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 1e-17
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 0.003
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 2e-17
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 2e-14
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 3e-13
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 1e-11
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 1e-10
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 7e-10
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 9e-08
d2bw4a2173 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali 2e-07
d1kbva2151 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse 7e-06
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 6e-05
d1qhqa_139 b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus 1e-04
d1oe1a2177 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcali 0.003
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  134 bits (339), Expect = 4e-38
 Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 12/189 (6%)

Query: 227 RLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQG 286
            +  ++N+ S   P     L A    +   + +N P    +  ++  D  PT  +    G
Sbjct: 21  YVKWAINDVSLALPP-TPYLGAMKYNLLHAFDQNPPP-EVFPEDYDIDTPPTNEK-TRIG 77

Query: 287 TEVKVLDYDSAVEINFQGTNLVAGTS---HPIHLHGYSFFVVGFGFGNFDEEKDPLNYNL 343
             V        V++  Q  N++       HP HLHG+ F+V+G+G G F  E +  + NL
Sbjct: 78  NGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE-EESSLNL 136

Query: 344 IDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLL 403
            +PPLR  V +   GW  +RF A NPGVW  HCH E HL  GM  VF     +       
Sbjct: 137 KNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVG----- 191

Query: 404 PPPPDVPPC 412
             P     C
Sbjct: 192 RIPTKALAC 200
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Length = 139 Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 177 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.97
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.94
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.9
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.9
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.9
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.87
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.85
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.85
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.82
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.72
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.66
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.57
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.45
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.41
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.36
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.34
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.28
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.27
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.14
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.1
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.08
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.02
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.01
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.98
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.96
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.94
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.63
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.62
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 98.44
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.43
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.38
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 98.38
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.37
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.32
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.32
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.27
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.26
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.06
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.98
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.77
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.74
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.71
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 97.65
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.62
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.62
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.49
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.48
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.47
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.44
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 97.29
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.25
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.24
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 97.21
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.12
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 97.07
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.01
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 96.99
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 96.96
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.96
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.96
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 96.78
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 96.77
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 96.72
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 96.63
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 96.62
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 96.59
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 96.49
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 96.41
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.32
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 96.28
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 96.26
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 96.26
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 96.18
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 96.17
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 96.17
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 96.1
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 96.09
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 96.04
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 95.98
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 95.92
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 95.92
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 95.85
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 95.84
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 95.41
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 94.87
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 94.34
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 94.18
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 93.98
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 93.6
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 93.01
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 91.8
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 91.77
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 91.6
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 89.94
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 88.89
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 88.08
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 87.34
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 86.1
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 85.17
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 80.64
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=1e-39  Score=292.42  Aligned_cols=195  Identities=34%  Similarity=0.604  Sum_probs=150.9

Q ss_pred             CCCcceEEEEEeccCcccCCCCCCCccCCCCceeeeeeccccccCCCchhHHHHHHhhccccccCCCCCCCCccccCCCC
Q 036841          195 PLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTAD  274 (412)
Q Consensus       195 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~N~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~  274 (412)
                      |.++++++.+....+.            .+| ...|++||++|..| .+|+|.+.+.+..+.+..+.   ++..|..+..
T Consensus         2 P~~~~~ti~l~~~~~~------------~ng-~~~~~iNniSf~~P-~~P~l~~~~~~~~~~~~~~~---~~~~~~~~~~   64 (214)
T d1aoza3           2 PVKFNRRIFLLNTQNV------------ING-YVKWAINDVSLALP-PTPYLGAMKYNLLHAFDQNP---PPEVFPEDYD   64 (214)
T ss_dssp             CSSCSEEEEEEEEEEE------------ETT-EEEEEETTEEECCC-SSCHHHHHHTTCTTSSCCSC---CCSCCCTTCC
T ss_pred             CCCCCeEEEEecCccc------------cCC-eEEEEECCEeccCC-CcchHHHHhhccccccccCC---Cccccccccc
Confidence            4467889988554332            133 35799999999999 78888887766666554332   3333432211


Q ss_pred             -CCCCCccCCCCCceEEEeeCCCEEEEEEecCCcC---CCCCCceeecCceEEEEeecCCCCCCCCCCCCCCCCCCCcee
Q 036841          275 -DLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLV---AGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRT  350 (412)
Q Consensus       275 -~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~---~~~~Hp~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~np~~rD  350 (412)
                       ..+......|.|++++.+++|++|||+|+|.+..   ....||||||||+||||+++.|.++.+. ...+++.+|++||
T Consensus        65 ~~~~~~~~~~~~~t~v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~-~~~~n~~~p~~rD  143 (214)
T d1aoza3          65 IDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE-ESSLNLKNPPLRN  143 (214)
T ss_dssp             TTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG-GGGSCCSSCCEES
T ss_pred             ccCCCCCcccccCceeEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccc-cccccccCCceec
Confidence             1111222346788899999999999999997531   2457999999999999999999887653 4678999999999


Q ss_pred             eEEeCCCcEEEEEEEcCCceeEEEEeehhHhHhcCceEEEEEeCCCCCCCCCCCCCCCCCCC
Q 036841          351 IVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQERLLPPPPDVPPC  412 (412)
Q Consensus       351 Tv~vp~~~~~~vr~~~~npG~w~~HCHi~~H~~~GM~~~~~V~~~~~~~~~~~~~p~~~~~c  412 (412)
                      |+.|++++|++|||++||||.|+||||+++|++.||+++|.|.+     ++++++|.+++.|
T Consensus       144 Tv~v~~g~~~~ir~~adnpG~w~~HCH~~~H~~~GM~~~~~v~~-----~~~~~~P~~~~~c  200 (214)
T d1aoza3         144 TVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKALAC  200 (214)
T ss_dssp             EEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----GGCCCCCHHHHSS
T ss_pred             CcccCCCceEEEEEecCCCeeEEEEECcHHHHhCcCcEEEEEcc-----ccccCCCcccccc
Confidence            99999999999999999999999999999999999999999843     4667788899988
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure