Citrus Sinensis ID: 036863

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEcccccccHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEEEEccccccEEEEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEcccccccccHEccccccccHHHHHHHHHHHHHHcccccccccccccEcccEEEEEEEccEEEEEEEEEEcccccEEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MPRTSPAIFCLLALATIHLssahnkpqDYLKAHNEARasvgvgpmswdykladysHKHAQklkgncnskktqvsKYSETIAWSSQGELTAAEYVKICmdgkplydhnsntcaingtkcAVYTQVVWRNsvrlgcakercnkngthnfvicnydppgnvfgqrpy
Flexible Loop (DISEMBL)
MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAqklkgncnskktQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERcnkngthnfvicnydppgnvfgqrpy
Low Complexity Region (SEG)
MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY
Disordered region (IsUnstruct)
******AIFCLLALATIHLSSAH*****YLKA***ARASVGVGPMSWDYKLADYSHKH****************KYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPP*********
Disordered Region (DISOPRED)
***TSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY
Disordered Region (DISEMBL)
MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNC**********SETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY
Disordered Region (DISPRO)
*PRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQR**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
P07053	168	Pathogenesis-related prot	N/A	no	0.975	0.952	0.493	8e-37
P09042	168	Pathogenesis-related prot	N/A	no	0.914	0.892	0.506	3e-36
P11670	177	Basic form of pathogenesi	N/A	no	0.963	0.892	0.490	2e-35
P04284	159	Pathogenesis-related leaf	N/A	no	0.932	0.962	0.487	2e-34
P33154	161	Pathogenesis-related prot	no	no	0.914	0.931	0.471	6e-34
P08299	168	Pathogenesis-related prot	N/A	no	0.871	0.851	0.503	1e-33
Q04108	159	Pathogenesis-related leaf	N/A	no	0.939	0.968	0.472	2e-33
Q41359	167	Pathogenesis-related prot	N/A	no	0.884	0.868	0.479	2e-32
Q08697	175	Pathogenesis-related prot	N/A	no	0.914	0.857	0.451	2e-29
Q00008	167	Pathogenesis-related prot	N/A	no	0.939	0.922	0.415	1e-28

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  152 bits (385), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 81/164 (49%), Positives = 100/164 (60%), Gaps = 4/164 (2%)

Query: 1   MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
           MP        LL L   H S A N  QDYL AHN ARA VGV P++WD  +A Y+  +  
Sbjct: 9   MPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVS 68

Query: 61  KLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
           +L  +CN   +   +Y E +A  S   +TAA+ V++ +D K  YDH+SNTCA  G  C  
Sbjct: 69  QLAADCNLVHSH-GQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGH 126

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQVVWRNSVR+GCA+ +CN  G    V CNYDPPGNV GQ PY
Sbjct: 127 YTQVVWRNSVRVGCARVKCNNGGY--VVSCNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.
Nicotiana tabacum (taxid: 4097)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  150 bits (379), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/154 (50%), Positives = 99/154 (64%), Gaps = 4/154 (2%)

Query: 11  LLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKK 70
           LL L   H   A N  QDYL AHN ARA VGV P++WD ++A Y+  +A +L  +CN   
Sbjct: 19  LLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVH 78

Query: 71  TQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSV 130
           +   +Y E +AW S   LTAA+ V++ ++ K  Y H+SNTCA  G  C  YTQVVWRNSV
Sbjct: 79  SH-GQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCA-QGQVCGHYTQVVWRNSV 136

Query: 131 RLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           R+GCA+ +CN  G    V CNYDPPGNV G+ PY
Sbjct: 137 RVGCARVQCNNGGY--IVSCNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1

 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 102/165 (61%), Gaps = 7/165 (4%)

Query: 1   MPRTSPAIFCLLALAT-IHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHA 59
           M   +  + C +  A  IH S A N PQDYL  HN AR  VGVGPM+WD +LA Y+  +A
Sbjct: 1   MGFLTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYA 60

Query: 60  QKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCA 119
            +  G+C    +    Y E +A ++  +L AA  VK+ +D K  YD+NSN+C   G  C 
Sbjct: 61  NQRIGDCGMIHSH-GPYGENLA-AAFPQLNAAGAVKMWVDEKRFYDYNSNSCV--GGVCG 116

Query: 120 VYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
            YTQVVWRNSVRLGCA+ R N NG   F+ CNYDPPGN  GQRP+
Sbjct: 117 HYTQVVWRNSVRLGCARVRSN-NGWF-FITCNYDPPGNFIGQRPF 159

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P04284|PR06_SOLLC Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 96/160 (60%), Gaps = 7/160 (4%)

Query: 5   SPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKG 64
           S  + CL+ LA  H   A N PQDYL  HN+ARA VGVGPMSWD  LA  +  +A    G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 65  NCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQV 124
           +CN      S   E +A    G+ T    V++ +  +P Y++ +N C + G KC  YTQV
Sbjct: 67  DCNLIH---SGAGENLA-KGGGDFTGRAAVQLWVSERPSYNYATNQC-VGGKKCRHYTQV 121

Query: 125 VWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           VWRNSVRLGC + RCN NG   F+ CNYDP GN  GQRPY
Sbjct: 122 VWRNSVRLGCGRARCN-NGWW-FISCNYDPVGNWIGQRPY 159

Probably involved in the defense reaction of plants against pathogens. Has antifungal activity.

Solanum lycopersicum (taxid: 4081)

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score =  143 bits (360), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 99/157 (63%), Gaps = 7/157 (4%)

Query: 8   IFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCN 67
           +F  L  A +  S A + PQDYL+ HN+AR +VGVGPM WD ++A Y+  +A++L+GNC 
Sbjct: 12  VFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCR 71

Query: 68  SKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWR 127
              +    Y E +AW S G+L+    V + +  K  Y++ +NTC  NG  C  YTQVVWR
Sbjct: 72  LIHSG-GPYGENLAWGS-GDLSGVSAVNMWVSEKANYNYAANTC--NGV-CGHYTQVVWR 126

Query: 128 NSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
            SVRLGCAK RCN  GT   + CNYDP GN   ++PY
Sbjct: 127 KSVRLGCAKVRCNNGGT--IISCNYDPRGNYVNEKPY 161

Partially responsible for acquired pathogen resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 95/147 (64%), Gaps = 4/147 (2%)

Query: 18  HLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYS 77
           H   A N  QDYL AHN ARA VGV P++WD ++A Y+  +A +L  +CN   +   +Y 
Sbjct: 26  HSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSH-GQYG 84

Query: 78  ETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKE 137
           E +A  S   +TAA+ V++ +D K  YDH+SNTCA  G  C  YTQVVWRNSVR+GCA+ 
Sbjct: 85  ENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQVVWRNSVRVGCARV 143

Query: 138 RCNKNGTHNFVICNYDPPGNVFGQRPY 164
           +CN  G    V CNYDPPGN  G+ PY
Sbjct: 144 QCNNGGY--VVSCNYDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q04108|PR04_SOLLC Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/161 (47%), Positives = 95/161 (59%), Gaps = 7/161 (4%)

Query: 4   TSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLK 63
            S  + CL+ LA  H   A N PQDYL  HN+ARA VGVGPMSWD  LA  +  +A    
Sbjct: 6   ISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRA 65

Query: 64  GNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQ 123
           G+CN      S   E +A    G+ T    V++ +  +P Y++ +N C + G  C  YTQ
Sbjct: 66  GDCNLIH---SGAGENLA-KGGGDFTGRAAVQLWVSERPDYNYATNQC-VGGKMCGHYTQ 120

Query: 124 VVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           VVWRNSVRLGC + RCN NG   F+ CNYDP GN  G+RPY
Sbjct: 121 VVWRNSVRLGCGRARCN-NGWW-FISCNYDPVGNWVGERPY 159

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 3/148 (2%)

Query: 17  IHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKY 76
           +  S A N PQDY+ AHN AR++V VGP++WD  +A ++ ++AQ   G+C    +   +Y
Sbjct: 23  VQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHSGDPRY 82

Query: 77  SETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAK 136
            E +A+ S  ELT    V + +  +  Y+ N+NTCA  G  C  YTQVVWRNSVR+GCA+
Sbjct: 83  GENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAP-GKVCGHYTQVVWRNSVRIGCAR 141

Query: 137 ERCNKNGTHNFVICNYDPPGNVFGQRPY 164
            RCN NG   F+ CNY PPGN  GQRPY
Sbjct: 142 VRCN-NGAW-FITCNYSPPGNYAGQRPY 167

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

>sp|Q08697|PR1A_SOLLC Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 91/155 (58%), Gaps = 5/155 (3%)

Query: 3   RTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKL 62
           ++S  + C +     H S A    +++L AHN AR  VGVGPM+WD  LA Y+  +A + 
Sbjct: 2   KSSIFVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQR 61

Query: 63  KGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYT 122
             +C    +    Y E +A ++  +L AA  VK+  D K  YD+NSNTCA  G  C  YT
Sbjct: 62  ADDCGMIHSD-GPYGENLA-AAFPQLNAAGAVKMWDDEKQWYDYNSNTCAP-GKVCGHYT 118

Query: 123 QVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGN 157
           QVVWR SVRLGCA+ RCN      F+ CNYDPPGN
Sbjct: 119 QVVWRKSVRLGCARVRCNSGWV--FITCNYDPPGN 151

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|Q00008|PRMS_MAIZE Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 5/159 (3%)

Query: 8   IFCLLALAT-IHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNC 66
           ++ ++A AT +H S + N PQDYL   N ARA+VGVGP++W  KL  ++ K+A +  G+C
Sbjct: 12  LWLVMAAATAVHPSYSENSPQDYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDC 71

Query: 67  NSKKTQVSKYSETIAWSSQG-ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVV 125
             + +    Y E I W S G +  A + V+  +D K  Y++ +N+CA  G  C  YTQVV
Sbjct: 72  RLQHSG-GPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAA-GKVCGHYTQVV 129

Query: 126 WRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           WR +  +GCA+  C  N    F+ICNY+P GN+ G +PY
Sbjct: 130 WRATTSIGCARVVCRDN-RGVFIICNYEPRGNIAGMKPY 167

Probably involved in the defense reaction of plants against pathogens.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
255562124	162	STS14 protein precursor, putative [Ricin	0.945	0.956	0.525	1e-39
224105801	161	predicted protein [Populus trichocarpa]	0.957	0.975	0.518	4e-39
224150051	161	predicted protein [Populus trichocarpa]	0.957	0.975	0.518	6e-39
307340515	160	pathogenesis-related protein 1 [Vitis hy	0.963	0.987	0.518	6e-39
225429115	160	PREDICTED: basic form of pathogenesis-re	0.963	0.987	0.518	6e-39
307340507	160	pathogenesis-related protein 1 [Vitis hy	0.963	0.987	0.518	6e-39
307340531	159	pathogenesis-related protein 1 [Vitis vi	0.951	0.981	0.524	6e-39
307340513	160	pathogenesis-related protein 1 [Vitis hy	0.963	0.987	0.512	7e-39
307340509	160	pathogenesis-related protein 1 [Vitis hy	0.963	0.987	0.512	7e-39
224105805	161	predicted protein [Populus trichocarpa]	0.957	0.975	0.5	1e-38

>gi|255562124|ref|XP_002522070.1| STS14 protein precursor, putative [Ricinus communis] gi|223538669|gb|EEF40270.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 111/160 (69%), Gaps = 5/160 (3%)

Query: 5   SPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKG 64
           S A+ C++++A I  S A +  QDYL AHN AR  VG+GP++WD K+A Y+  HA + K 
Sbjct: 7   SLALVCIISIALIFSSHAQDTQQDYLNAHNSARGDVGLGPLTWDDKVASYAQHHANQHKS 66

Query: 65  NCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQV 124
           +C+   ++   Y E +AWSS G+L+  + VK+ +D KP YD+NSN+CA +G  C  YTQV
Sbjct: 67  DCSLVHSE-GPYGENLAWSS-GDLSGTDAVKMWIDEKPYYDYNSNSCA-SGQICGHYTQV 123

Query: 125 VWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           VWR+SVRLGCAK  CN  GT  F+ CNYDPPGN  GQRPY
Sbjct: 124 VWRSSVRLGCAKVSCNNGGT--FIGCNYDPPGNYIGQRPY 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105801|ref|XP_002313935.1| predicted protein [Populus trichocarpa] gi|222850343|gb|EEE87890.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/162 (51%), Positives = 109/162 (67%), Gaps = 5/162 (3%)

Query: 3   RTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKL 62
           + S A F L+ L+ I  S A + PQDYL AHN ARA+VGVGP++WD  +  Y+  +A + 
Sbjct: 5   KISLAFFTLITLSLILPSRAQDNPQDYLDAHNTARAAVGVGPLTWDTTVQAYAQNYANQR 64

Query: 63  KGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYT 122
            G+CN   +    Y E IAWSS  +L+  + VK+ +D K  YD+NSN+CA  G +C  YT
Sbjct: 65  AGDCNLIHSG-GPYGENIAWSS-ADLSGTDAVKMWVDEKAYYDYNSNSCAA-GQQCGHYT 121

Query: 123 QVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           QVVWRNS RLGCAK +C+  GT  F+ CNYDPPGNV GQ+PY
Sbjct: 122 QVVWRNSARLGCAKVKCSTGGT--FIGCNYDPPGNVVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224150051|ref|XP_002336902.1| predicted protein [Populus trichocarpa] gi|222837091|gb|EEE75470.1| predicted protein [Populus trichocarpa]

 Score =  165 bits (418), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 84/162 (51%), Positives = 109/162 (67%), Gaps = 5/162 (3%)

Query: 3   RTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKL 62
           + S A F L+ L+ I  S A + PQDYL AHN ARA+VGVGP++WD  +  Y+  +A + 
Sbjct: 5   KISLAFFTLITLSLILPSRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQR 64

Query: 63  KGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYT 122
            G+CN   +    Y E IAWSS  +L+ A+ VK+ +D K  YD+NSN+CA  G +C  YT
Sbjct: 65  AGDCNLVHSG-GPYGENIAWSS-ADLSGADAVKMWVDEKAYYDYNSNSCAA-GQQCGHYT 121

Query: 123 QVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           QVVWRNS RLGCAK +C+  GT  F+ CNYDPPGN  GQ+PY
Sbjct: 122 QVVWRNSARLGCAKVKCSTGGT--FIGCNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340515|gb|ADN43419.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  165 bits (418), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/164 (51%), Positives = 104/164 (63%), Gaps = 6/164 (3%)

Query: 1   MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
           + + S    C+L LA +H S A N  QDYL AHN ARA VGVG M+W+  +A Y+  +A 
Sbjct: 3   LFKISLVFICVLGLALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYAN 62

Query: 61  KLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
           +  G+CN   +    Y E IAW S G LT  + V + +  KP YD+NSN+C   G KC  
Sbjct: 63  QRIGDCNLVHSN-GPYGENIAWGS-GSLTGTDAVNLWVGEKPNYDYNSNSCV--GGKCGH 118

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQVVWRNSVRLGCA+ +CN  G   FV CNYDPPGN  GQRPY
Sbjct: 119 YTQVVWRNSVRLGCARVQCNNGGW--FVTCNYDPPGNYVGQRPY 160

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429115|ref|XP_002273416.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis vinifera] gi|307340517|gb|ADN43420.1| pathogenesis-related protein 1 [Vitis hybrid cultivar] gi|307340519|gb|ADN43421.1| pathogenesis-related protein 1 [Vitis hybrid cultivar] gi|307340521|gb|ADN43422.1| pathogenesis-related protein 1 [Vitis vinifera] gi|307340523|gb|ADN43423.1| pathogenesis-related protein 1 [Vitis vinifera] gi|307340525|gb|ADN43424.1| pathogenesis-related protein 1 [Vitis vinifera] gi|307340527|gb|ADN43425.1| pathogenesis-related protein 1 [Vitis vinifera]

 Score =  165 bits (418), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/164 (51%), Positives = 104/164 (63%), Gaps = 6/164 (3%)

Query: 1   MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
           + + S    CL+ LA +H S A N  QDYL AHN ARA VGVG M+W+  +A Y+  +A 
Sbjct: 3   LFKISLVFICLVGLALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYAN 62

Query: 61  KLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
           +  G+CN   +    Y E IAW S G LT  + V + +  KP YD+NSN+C   G KC  
Sbjct: 63  QRIGDCNLVHSN-GPYGENIAWGS-GSLTGTDAVNLWVGEKPNYDYNSNSCV--GGKCGH 118

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQVVWRNSVRLGCA+ +CN  G   FV CNYDPPGN  GQRPY
Sbjct: 119 YTQVVWRNSVRLGCARVQCNNGGW--FVTCNYDPPGNYVGQRPY 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340507|gb|ADN43415.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/164 (51%), Positives = 104/164 (63%), Gaps = 6/164 (3%)

Query: 1   MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
           + + S    C+L LA +H S A N  QDYL AHN ARA VGVG M+W+  +A Y+  +A 
Sbjct: 3   LFKISLVFICVLGLALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYAN 62

Query: 61  KLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
           +  G+CN   +    Y E IAW S G LT  + V + +  KP YD+NSN+C   G KC  
Sbjct: 63  QRIGDCNLVHSN-GPYGENIAWGS-GSLTGTDAVDLWVGEKPNYDYNSNSCV--GGKCGH 118

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQVVWRNSVRLGCA+ +CN  G   FV CNYDPPGN  GQRPY
Sbjct: 119 YTQVVWRNSVRLGCARVQCNNGGW--FVTCNYDPPGNYVGQRPY 160

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340531|gb|ADN43427.1| pathogenesis-related protein 1 [Vitis vinifera]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 103/162 (63%), Gaps = 6/162 (3%)

Query: 3   RTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKL 62
           + S    CL+ LA +H S A N  QDYL AHN ARA VGVG M+W+  +A Y+  +A + 
Sbjct: 4   KISLVFICLVGLALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQR 63

Query: 63  KGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYT 122
            G+CN   +    Y E IAW S G LT  + V + +  KP YD+NSN+C   G KC  YT
Sbjct: 64  IGDCNLVHSN-GPYGENIAWGS-GSLTGTDAVNLWVGEKPNYDYNSNSCV--GGKCGHYT 119

Query: 123 QVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           QVVWRNSVRLGCA+ +CN  G   FV CNYDPPGN  GQRPY
Sbjct: 120 QVVWRNSVRLGCARVQCNNGGW--FVTCNYDPPGNYVGQRPY 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340513|gb|ADN43418.1| pathogenesis-related protein 1 [Vitis hybrid cultivar] gi|307340529|gb|ADN43426.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 104/164 (63%), Gaps = 6/164 (3%)

Query: 1   MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
           + + S    CL+ LA +H S A N  QDYL AHN ARA VGVG M+W+  +A Y+  +A 
Sbjct: 3   LFKISLVFICLVGLALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYAN 62

Query: 61  KLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
           +  G+CN   +    Y E IAW S G LT  + V + +  KP YD+NSN+C   G KC  
Sbjct: 63  QRIGDCNLVHSN-GPYGENIAWGS-GSLTGTDAVNLWVGEKPNYDYNSNSCV--GGKCGH 118

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQVVWRNSVRLGCA+ +CN  G   F+ CNYDPPGN  GQRPY
Sbjct: 119 YTQVVWRNSVRLGCARVQCNNGGW--FITCNYDPPGNYVGQRPY 160

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307340509|gb|ADN43416.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 104/164 (63%), Gaps = 6/164 (3%)

Query: 1   MPRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
           + + S    C+L LA +H S A N  QDYL AHN ARA VGVG M+W+  +A Y+  +A 
Sbjct: 3   LFKISLVFICVLGLALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYAN 62

Query: 61  KLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
           +  G+CN   +    Y E IAW S G LT  + V + +  KP YD+NSN+C   G KC  
Sbjct: 63  QRIGDCNLVHSN-GPYGENIAWGS-GSLTGTDAVNLWVGEKPNYDYNSNSCV--GGKCGH 118

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQVVWRNSVRLGCA+ +CN  G   F+ CNYDPPGN  GQRPY
Sbjct: 119 YTQVVWRNSVRLGCARVQCNNGGW--FITCNYDPPGNYVGQRPY 160

Source: Vitis hybrid cultivar

Species: Vitis hybrid cultivar

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105805|ref|XP_002313936.1| predicted protein [Populus trichocarpa] gi|222850344|gb|EEE87891.1| predicted protein [Populus trichocarpa]

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 108/162 (66%), Gaps = 5/162 (3%)

Query: 3   RTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKL 62
           + S A F L+ L+ I  S A + PQDYL AHN ARA+VGVGP++WD  +  Y+  +A + 
Sbjct: 5   KISLAFFTLITLSLILPSRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQTYANQR 64

Query: 63  KGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYT 122
            G+CN   +    Y E + WSS  +L+  + VK+ +D K  YD+NSN+CA +G +C  YT
Sbjct: 65  AGDCNLVHSG-GPYGEILQWSS-ADLSGTDAVKLWVDEKAFYDYNSNSCA-SGQQCVSYT 121

Query: 123 QVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           QVVW NSV LGCAK  C+  GT  F++CNYDPPGNV GQ+PY
Sbjct: 122 QVVWGNSVSLGCAKVTCSAGGT--FIVCNYDPPGNVVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.920	0.926	0.525	1.7e-36
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.914	0.931	0.471	5.1e-35
TAIR|locus:2055240	161	PRB1 "AT2G14580" [Arabidopsis	0.914	0.931	0.471	1.2e-33
TAIR|locus:2091196	161	AT3G19690 "AT3G19690" [Arabido	0.932	0.950	0.449	9.8e-32
TAIR|locus:2180662	166	AT5G26130 "AT5G26130" [Arabido	0.969	0.957	0.445	1.4e-30
TAIR|locus:2005537	176	PR-1-LIKE "AT2G19990" [Arabido	0.817	0.761	0.485	2.3e-30
TAIR|locus:2134283	166	AT4G33710 "AT4G33710" [Arabido	0.951	0.939	0.430	1.2e-28
TAIR|locus:2134193	172	AT4G33730 "AT4G33730" [Arabido	0.835	0.796	0.444	1.9e-28
TAIR|locus:2031055	161	AT1G50060 "AT1G50060" [Arabido	0.859	0.875	0.434	1e-27
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.823	0.642	0.391	3.3e-24

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 83/158 (52%), Positives = 103/158 (65%)

Query:     7 AIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNC 66
             AI   L L  +HL  A + PQD+L  HN ARA VGVGP+ WD K+A Y+  +A + KG+C
Sbjct:    13 AITFFLVLI-VHLK-AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDC 70

Query:    67 NSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVW 126
               K +  S Y E IAWSS G +T    V + +D +  YD++SNTCA +  +C  YTQVVW
Sbjct:    71 AMKHSSGS-YGENIAWSS-GSMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQVVW 127

Query:   127 RNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
             RNS RLGCAK RCN NG   F+ CNYDPPGN  G+ PY
Sbjct:   128 RNSERLGCAKVRCN-NG-QTFITCNYDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 74/157 (47%), Positives = 99/157 (63%)

Query:     8 IFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCN 67
             +F  L  A +  S A + PQDYL+ HN+AR +VGVGPM WD ++A Y+  +A++L+GNC 
Sbjct:    12 VFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCR 71

Query:    68 SKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWR 127
                +    Y E +AW S G+L+    V + +  K  Y++ +NTC  NG  C  YTQVVWR
Sbjct:    72 LIHSG-GPYGENLAWGS-GDLSGVSAVNMWVSEKANYNYAANTC--NGV-CGHYTQVVWR 126

Query:   128 NSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
              SVRLGCAK RCN  GT   + CNYDP GN   ++PY
Sbjct:   127 KSVRLGCAKVRCNNGGT--IISCNYDPRGNYVNEKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2055240 PRB1 "AT2G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 74/157 (47%), Positives = 98/157 (62%)

Query:     8 IFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCN 67
             I   L  A +    A +  QDY+ AHN+AR+ +GVGPM WD  LA Y+  +A +LKG+C 
Sbjct:    12 ILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCR 71

Query:    68 SKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWR 127
                ++   Y E +A  S G+L+    V + ++ K  Y++++NTC  NG  C  YTQVVWR
Sbjct:    72 LVHSR-GPYGENLA-KSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGV-CGHYTQVVWR 126

Query:   128 NSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
             NSVRLGCAK RCN  GT   + CNYDPPGN   Q+PY
Sbjct:   127 NSVRLGCAKVRCNNGGT--IISCNYDPPGNYANQKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

TAIR|locus:2091196 AT3G19690 "AT3G19690" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 71/158 (44%), Positives = 101/158 (63%)

Query:     8 IFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCN 67
             I  LLA+A  + S A +  Q +L+AHNEAR  VG+ P+ WD ++A Y+  +A +   +C 
Sbjct:     8 ILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCA 67

Query:    68 SKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAI-NGTKCAVYTQVVW 126
                +    + E IA SS GE++A +  ++ ++ K  YD++SNTC   NG  C  YTQVVW
Sbjct:    68 LVHSN-GPFGENIAMSS-GEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVW 125

Query:   127 RNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
             +N+VRLGCAK  CN  GT  F+ CNYDPPGN  G++P+
Sbjct:   126 KNTVRLGCAKVVCNSGGT--FITCNYDPPGNYIGEKPF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180662 AT5G26130 "AT5G26130" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 73/164 (44%), Positives = 96/164 (58%)

Query:     2 PRTSPAIFCLLALATIHLSSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQK 61
             P+T      +L LA      A ++PQDYL  HN AR  VGV PM W      Y+  +AQ+
Sbjct:     7 PQTLILSVIVLFLAFAVPLKAQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQ 66

Query:    62 LKGNCN-SKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAV 120
              KG+C+ +       Y E +AWS  G L+ AE VK+ ++ K  Y + SNTC+ +G +C  
Sbjct:    67 RKGDCSLTHSNSNGLYGENLAWSG-GALSGAEAVKLWVNEKSDYIYASNTCS-DGKQCGH 124

Query:   121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
             YTQVVWR S  +GCAK +C+  GT  FV CNY PPGN  G+ PY
Sbjct:   125 YTQVVWRTSEWVGCAKVKCDNGGT--FVTCNYYPPGNYRGRWPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2005537 PR-1-LIKE "AT2G19990" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 69/142 (48%), Positives = 89/142 (62%)

Query:    25 KPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIA--W 82
             KPQ+ L  HN+ARA VGVGPM W+  LA Y+  +A +   +C + K  +  + E +A  W
Sbjct:    41 KPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDC-AMKHSLGPFGENLAAGW 99

Query:    83 SSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKN 142
              +     A EY    M  K  YD++SNTC  +G  C  YTQ+VWR+SVRLGCA  RC KN
Sbjct:   100 GTMSGPVATEY---WMTEKENYDYDSNTCGGDGV-CGHYTQIVWRDSVRLGCASVRC-KN 154

Query:   143 GTHNFVICNYDPPGNVFGQRPY 164
               + +VIC+YDPPGN  GQRPY
Sbjct:   155 DEYIWVICSYDPPGNYIGQRPY 176

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0042742 "defense response to bacterium" evidence=IEP

TAIR|locus:2134283 AT4G33710 "AT4G33710" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 71/165 (43%), Positives = 94/165 (56%)

Query:     5 SPAIFCLLALATIHLSS----AHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQ 60
             SP    LLALA +   +    A ++ QDYL  HN AR  V V  + W    A Y+  +AQ
Sbjct:     6 SPQTLVLLALALVLAFAVPLKAQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQ 65

Query:    61 KLKGNCNS-KKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCA 119
             + K +C         +Y E +AWSS G+++ A  V++ +  K  Y H SNTC   G +C 
Sbjct:    66 RRKRDCRLIHSNSRGRYGENLAWSS-GDMSGAAAVRLWVREKSDYFHKSNTCRA-GKQCG 123

Query:   120 VYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
              YTQVVW+NS  +GCAK +C+  GT  FV CNY  PGNV G+RPY
Sbjct:   124 HYTQVVWKNSEWVGCAKVKCDNGGT--FVTCNYSHPGNVRGRRPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134193 AT4G33730 "AT4G33730" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 64/144 (44%), Positives = 88/144 (61%)

Query:    22 AHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKL-KGNCNSKKTQVSKYSETI 80
             +H  P  YL+ HN ARA+V V P+ WD+ +A  +  +A  L  G C+ + +    Y E +
Sbjct:    35 SHEYPDSYLRPHNAARAAVKVKPLRWDFGIATVAQDYANHLASGPCSLEHSS-GPYGENL 93

Query:    81 AWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCN 140
             A+ S G+++AA+ V + +  K  YD  SN+C  +G  C  YTQVVWR S RLGC K +CN
Sbjct:    94 AFGS-GDMSAAQAVAMWVHEKSYYDFYSNSC--HGPACGHYTQVVWRGSARLGCGKAKCN 150

Query:   141 KNGTHNFVICNYDPPGNVFGQRPY 164
              NG  + V+CNYDP GN  G RPY
Sbjct:   151 -NGA-SIVVCNYDPAGNYIGARPY 172

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2031055 AT1G50060 "AT1G50060" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 63/145 (43%), Positives = 85/145 (58%)

Query:    20 SSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSET 79
             ++A N PQDYL +HN ARA VGV  + WD  LA Y+  ++   K +CN   +    Y E 
Sbjct:    21 TNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSN-GPYGEN 79

Query:    80 IAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERC 139
             +A  S    +A   VK+ +D KP Y +  N C   G +C  YTQVVWR+SV++GCA+ +C
Sbjct:    80 LAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCT-GGKQCLHYTQVVWRDSVKIGCARVQC 138

Query:   140 NKNGTHNFVICNYDPPGNVFGQRPY 164
                 T  FV CNY+ PGN  G+ PY
Sbjct:   139 TN--TWWFVSCNYNSPGNWVGEYPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 54/138 (39%), Positives = 77/138 (55%)

Query:    27 QDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQG 86
             Q +L  HN  R  +G+ P+ WD K+A Y+   A + + +C S       Y E + W S  
Sbjct:    76 QQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDC-SLTHSTGPYGENLFWGSGS 134

Query:    87 ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHN 146
             + T+   V+        Y+H +NTC  +G  C  YTQ+VWR + RLGCA+  C +NG   
Sbjct:   135 DFTSTFAVESWTVEAKSYNHMTNTCEGDGM-CGHYTQIVWRETRRLGCARVVC-ENGAGV 192

Query:   147 FVICNYDPPGNVFGQRPY 164
             F+ CNYDPPGN  G++PY
Sbjct:   193 FITCNYDPPGNYVGEKPY 210

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P09042	PR1C_TOBAC	No assigned EC number	0.5064	0.9146	0.8928	N/A	no
P08299	PR1A_TOBAC	No assigned EC number	0.5034	0.8719	0.8511	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0001072301 hypothetical protein (162 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	2e-53
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	3e-25
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	6e-23
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	2e-22
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	7e-22
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	3e-18
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	9e-12
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	4e-11
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	6e-11
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	9e-05

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  165 bits (421), Expect = 2e-53
 Identities = 69/139 (49%), Positives = 90/139 (64%), Gaps = 3/139 (2%)

Query: 26  PQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQ 85
           PQD+L AHN ARA+VGV P+ WD  LA Y+ ++A + +G+C    +    Y E + W S 
Sbjct: 1   PQDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSN-GPYGENLFWGSG 59

Query: 86  GELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTH 145
           G  +AA+ V   +  K  YD++SNTCA  G  C  YTQVVWRN+ R+GCA+  C+  G  
Sbjct: 60  GNWSAADAVASWVSEKKYYDYDSNTCA-AGKMCGHYTQVVWRNTTRVGCARVTCDNGGG- 117

Query: 146 NFVICNYDPPGNVFGQRPY 164
            F+ICNYDPPGN  GQRPY
Sbjct: 118 VFIICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 93.4 bits (233), Expect = 3e-25
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 27  QDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIA--WSS 84
           ++ L AHNE RA  G  P+  D +LA  + K A+KL  +   + +  S Y E +A    S
Sbjct: 4   KECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGS 63

Query: 85  QGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGT 144
             +LT  E V    +    YD N        +K   +TQVVW++S  LG    +  K   
Sbjct: 64  GPDLTGEEAVDSWYNEIKKYDFNKPG---FSSKTGHFTQVVWKSSTELGVGVAKSKKGCV 120

Query: 145 HNFVICNYDPPGNV 158
             +V+  Y P GNV
Sbjct: 121 --YVVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score = 88.2 bits (219), Expect = 6e-23
 Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 21/148 (14%)

Query: 24  NKPQDYLKAHNEARASVGVG-----------PMSWDYKLADYSHKHAQKLKGNCNSK-KT 71
            + Q+ L AHN+ R+ V  G            ++WD +LA  +   A +    C     T
Sbjct: 1   AQQQEILDAHNKLRSQVAGGFLAAPAASNMLKLTWDCELASSAQNWANQ----CPFGHST 56

Query: 72  QVSKYSETIAWSSQGELTAAEYVKICMDG----KPLYDHNSNTCAINGTKCAVYTQVVWR 127
               Y E +AW S        Y    +         Y ++SNTC     K   YTQVVW 
Sbjct: 57  PRPGYGENLAWWSSSTALPDTYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWA 116

Query: 128 NSVRLGCAKERC-NKNGTHNFVICNYDP 154
            + ++GC    C +       V+CNYDP
Sbjct: 117 KTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score = 86.0 bits (213), Expect = 2e-22
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 14/132 (10%)

Query: 26  PQDYLKAHNEARASV-GVGPMSWDYKLADYSHKHAQKLKGNCN---SKKTQVSKYSETIA 81
            Q+ ++ HN  RA V G+ PMSWD +LA  +  +A      C    S +       E +A
Sbjct: 1   AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLA 56

Query: 82  WSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNK 141
             S  ++T    V+   +    Y+          +    YTQVVW+N+ ++GC    C  
Sbjct: 57  AGS-YDMTGPAAVQAWYNEIKNYNFGQPGF---SSGTGHYTQVVWKNTTKIGCGVAFCGS 112

Query: 142 NGTHNFVICNYD 153
           N    +V+CNY 
Sbjct: 113 NSY--YVVCNYG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 85.1 bits (211), Expect = 7e-22
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 27  QDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQG 86
              L AHN  RA  GV P++W+  LA+Y+  +A     + N   +    Y E +A    G
Sbjct: 4   SSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSG-GPYGENLAA---G 59

Query: 87  ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHN 146
             +    V    D    YD+++            +TQ+VW+++ ++GCA + C       
Sbjct: 60  YPSGTSAVDAWYDEIEDYDYSNPG---FSEATGHFTQLVWKSTTQVGCAYKDCG-GAWGW 115

Query: 147 FVICNYDPPGNVFG 160
           +++C YDP GNV G
Sbjct: 116 YIVCEYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 76.0 bits (187), Expect = 3e-18
 Identities = 37/144 (25%), Positives = 55/144 (38%), Gaps = 18/144 (12%)

Query: 27  QDYLKAHNEARASVGVG------------PMSWDYKLADYSHKHAQKLKGNCNSKKTQVS 74
           Q  L AHNE R+ V  G             + WD +LA  +   A+      +S      
Sbjct: 2   QAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAKTCVFE-HSPCRNTG 60

Query: 75  KYSETIAWSSQGELTAAEYVKIC----MDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSV 130
              + +A  S    T  E  +       +    Y   SN      +    +TQ+VW  + 
Sbjct: 61  GVGQNLAAGSSTGSTVEELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTT 120

Query: 131 RLGCAKERCNKNG-THNFVICNYD 153
           ++GCA  RC K+G     V+CNY 
Sbjct: 121 KVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 58.4 bits (141), Expect = 9e-12
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 30  LKAHNEARASVGVGP-MSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAW---SSQ 85
           L  HNE R++ G  P +SWD  LA  +  HA      C         Y E +A    + +
Sbjct: 1   LNLHNELRSAAGGAPPLSWDPTLAAAAQDHAAY----CADNGYFGHDYGENLALVSVAGK 56

Query: 86  GELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTH 145
            +      V+   D    YD      A   +     T ++W  S ++GCA  +C  +G+ 
Sbjct: 57  ADDPGVAAVENWYDEAKDYDAAVGINAWM-SSPGHRTNLLWPKSTKVGCAVAKCG-DGSS 114

Query: 146 NFVICNY 152
            +V+CNY
Sbjct: 115 YYVVCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 57.1 bits (138), Expect = 4e-11
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 12/133 (9%)

Query: 30  LKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSS 84
           +  HN+ R+ V      +  M+WD +LA  +  +A+K   + N       +  E +  S+
Sbjct: 5   VDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYARKCIWDHN-PDRGHLRVGENLFIST 63

Query: 85  QGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNK-NG 143
                A + V+   + K  Y++N+NTCA     C  YTQVVW N+ ++GC    C     
Sbjct: 64  GPPFDATKAVEDWNNEKLDYNYNTNTCA-PNKMCGHYTQVVWANTFKIGCGSYFCETLEV 122

Query: 144 TH----NFVICNY 152
                   ++CNY
Sbjct: 123 LRWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 57.0 bits (138), Expect = 6e-11
 Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 28  DYLKAHNEARASV-----GVGPMSWDYKLADYSHKHAQKLKGNCNS---KKTQVSKY--- 76
           + ++ HNE R+ V      +  M+WD  LA  +   A+K K   N    K+ +       
Sbjct: 5   ECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAKKCKFKHNIYLGKRYKCHPKFTS 64

Query: 77  -SETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCA 135
             E I   S    +    V    +    YD ++N+C  +   C  YTQVVW  S ++GCA
Sbjct: 65  VGENIWLGSIYIFSPKNAVTSWYNEGKFYDFDTNSC--SRV-CGHYTQVVWATSYKVGCA 121

Query: 136 KERCNKNGTH----NFVICNYDPP 155
              C   G       FV CNY P 
Sbjct: 122 VAFCPNLGGIPNAAIFV-CNYAPA 144

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 40.0 bits (94), Expect = 9e-05
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPP 155
           YTQ+VW  S  +GCA   C  +    F +C+Y P 
Sbjct: 104 YTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.98
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.88
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.83
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.68
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.31
PF11054	254	Surface_antigen: Sporozoite TA4 surface antigen; I	89.51

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=7.1e-42  Score=235.15  Aligned_cols=135  Identities=50%  Similarity=0.961  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCCCCCHHHHHHHHHhcCCCCCC
Q 036863           27 QDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDH  106 (164)
Q Consensus        27 ~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~~~~~~~~v~~W~~e~~~~~~  106 (164)
                      ++||+.||.+|+.++|++|+||++|+..||.+|++|+++|...|+.. .+|||++....+...+.++|+.|++|.+.|++
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~-~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~   80 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNG-PYGENLFWGSGGNWSAADAVASWVSEKKYYDY   80 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcCCCCcccCCC-CCCceEEEecCCCCCHHHHHHHHHhccccCCC
Confidence            68999999999999999999999999999999999888899888766 59999998775556789999999999999999


Q ss_pred             CCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCCCCC
Q 036863          107 NSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY  164 (164)
Q Consensus       107 ~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      ..+.+.. +..++|||||||+++++||||++.|.++ ...++||+|+|+||+.|++||
T Consensus        81 ~~~~~~~-~~~~~hftq~vw~~t~~vGCa~~~c~~~-~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          81 DSNTCAA-GKMCGHYTQVVWRNTTRVGCARVTCDNG-GGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCCcCC-CccchHHHHHHHHhcCEeceEEEEeCCC-CcEEEEEEeeCCCCCCCCCCC
Confidence            8877665 5689999999999999999999999873 237899999999999999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=1.1e-37  Score=212.49  Aligned_cols=129  Identities=29%  Similarity=0.548  Sum_probs=112.8

Q ss_pred             CchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCCCCCHHHHHHHHHhcCCC
Q 036863           24 NKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPL  103 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~~~~~~~~v~~W~~e~~~  103 (164)
                      +.++.||+.||.+|+.++|++|+||++|+..||.||++|+..|...|+.. .+|||++.+.   .++.++|+.|++|.++
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~~~~~~~~~-~~geNi~~~~---~~~~~~v~~W~~e~~~   76 (129)
T cd05384           1 SFASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGG-PYGENLAAGY---PSGTSAVDAWYDEIED   76 (129)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccCCceecCCC-CCCcEEEEec---CCHHHHHHHHHhhhhh
Confidence            46899999999999999999999999999999999997766666888766 6999998764   2688999999999999


Q ss_pred             CCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCC
Q 036863          104 YDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFG  160 (164)
Q Consensus       104 ~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g  160 (164)
                      |++..+..   +..++|||||||+++++||||++.|... ...++||+|+|+||+.|
T Consensus        77 y~~~~~~~---~~~~~h~tqmvw~~t~~vGCa~~~c~~~-~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          77 YDYSNPGF---SEATGHFTQLVWKSTTQVGCAYKDCGGA-WGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             CCCCCCCC---CCcccchhhhhhhccceeeeEEEEeCCC-CeEEEEEEEECCCCCCc
Confidence            99877543   3479999999999999999999999873 24789999999999875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=7.8e-38  Score=213.86  Aligned_cols=130  Identities=34%  Similarity=0.519  Sum_probs=115.0

Q ss_pred             CchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecC--CCCCHHHHHHHHHhcC
Q 036863           24 NKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQ--GELTAAEYVKICMDGK  101 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~--~~~~~~~~v~~W~~e~  101 (164)
                      ++++.||+.||.+|+.++|++|+||++|+..||.||++|+..+.+.|+....+|||++.+..  ....+.++|+.|++|.
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~e~   80 (132)
T cd05382           1 DFQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYNEI   80 (132)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCceeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHhcc
Confidence            46899999999999999999999999999999999997777667788776579999998864  4568899999999999


Q ss_pred             CCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCC
Q 036863          102 PLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNV  158 (164)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~  158 (164)
                      .+|++..+..   +..++||+||||+++++||||++.|+.+.  .++||+|+|+||+
T Consensus        81 ~~y~~~~~~~---~~~~gh~tqmvw~~t~~vGCa~~~~~~~~--~~~vC~Y~p~Gn~  132 (132)
T cd05382          81 KKYDFNKPGF---SSKTGHFTQVVWKSSTELGVGVAKSKKGC--VYVVARYRPAGNV  132 (132)
T ss_pred             ccCCCCCCCC---CCCCCCeEEeEecCCCceeeEEEEcCCCC--EEEEEEEeCCCCC
Confidence            9999875543   44799999999999999999999998754  7899999999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=1.2e-35  Score=206.13  Aligned_cols=125  Identities=30%  Similarity=0.565  Sum_probs=108.5

Q ss_pred             CchHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCC-----------CCcccEEEEecCCC
Q 036863           24 NKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV-----------SKYSETIAWSSQGE   87 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~-----------~~~geni~~~~~~~   87 (164)
                      +++++||+.||.+|+.+.     |++|+||++||..||.+|+    +|.+.|+..           ..+||||+....+.
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a~----~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~~   76 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAK----KCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYI   76 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHHh----cCCCCCCchhhcccccccccCcccceeeecccCC
Confidence            468999999999999994     8999999999999999999    898877542           25899998876556


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCC---eeEEEEEEecCC
Q 036863           88 LTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG---THNFVICNYDPP  155 (164)
Q Consensus        88 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~---~~~~~vC~Y~p~  155 (164)
                      +.+.++|+.||+|..+|++..+.+..   .++|||||||+++++||||++.|.++.   ...++||+|+|+
T Consensus        77 ~~~~~av~~W~~e~~~y~~~~~~~~~---~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          77 FSPKNAVTSWYNEGKFYDFDTNSCSR---VCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCCC---cccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            78999999999999999988766543   799999999999999999999998742   457899999994

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=1.2e-35  Score=204.71  Aligned_cols=125  Identities=26%  Similarity=0.439  Sum_probs=108.3

Q ss_pred             chHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCC-------CCcccEEEEecCCCCCHHH
Q 036863           25 KPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV-------SKYSETIAWSSQGELTAAE   92 (164)
Q Consensus        25 ~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~-------~~~geni~~~~~~~~~~~~   92 (164)
                      .|+.||+.||.+|+.+.     |++|+||++||..||.||+    +|...|++.       ..+|||++.... ...+++
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~~~~~GeNl~~~~~-~~~~~~   76 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWAN----TCNLTHSPPNGRTIGGITCGENIFMSSY-PRSWSD   76 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHHh----cCCCcCCchhhcccCCCCcceeeeccCC-CCCHHH
Confidence            47899999999999975     7789999999999999999    899888753       147999987653 357889


Q ss_pred             HHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCC
Q 036863           93 YVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPP  155 (164)
Q Consensus        93 ~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~  155 (164)
                      +|+.||+|..+|+++.+.+.. +..++|||||||+++++||||++.|..+....++||+|+|+
T Consensus        77 av~~W~~e~~~y~~~~~~~~~-~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          77 VIQAWYDEYKDFKYGVGATPP-GAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             HHHHHHHHHHhCCCCCCCCCC-CCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            999999999999998776555 66899999999999999999999998864457899999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=1.9e-35  Score=204.88  Aligned_cols=127  Identities=34%  Similarity=0.625  Sum_probs=111.3

Q ss_pred             chHHHHHHHHHHHhhCC-----------CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecC----CCCC
Q 036863           25 KPQDYLKAHNEARASVG-----------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQ----GELT   89 (164)
Q Consensus        25 ~~~~il~~hN~~R~~~~-----------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~----~~~~   89 (164)
                      .|+.||+.||.+|+.++           |++|.||++||..||.+|+    .|...|+....+|||++....    ....
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~GeNi~~~~~~~~~~~~~   77 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWAN----QCPFGHSTPRGYGENLAWWSSSTDLPITY   77 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHHH----hCCCcCCCcCCcCcceEEecccCcccchh
Confidence            57899999999999999           9999999999999999999    899989876689999998764    2457


Q ss_pred             HHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCC-eeEEEEEEecCC
Q 036863           90 AAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG-THNFVICNYDPP  155 (164)
Q Consensus        90 ~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~-~~~~~vC~Y~p~  155 (164)
                      +.++|+.||+|...|++..+.+...+..++|||||||+++++||||++.|.++. ...++||+|+|+
T Consensus        78 ~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       78 ASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             HHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            889999999999999998866542134789999999999999999999998863 456899999995

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=1.3e-34  Score=199.05  Aligned_cols=123  Identities=29%  Similarity=0.527  Sum_probs=107.8

Q ss_pred             hHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCC---CcccEEEEecCCCCCHHHHHHHH
Q 036863           26 PQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVS---KYSETIAWSSQGELTAAEYVKIC   97 (164)
Q Consensus        26 ~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~---~~geni~~~~~~~~~~~~~v~~W   97 (164)
                      |+.||+.||.+|+.++     |.+|+||++||..||.+|+    +|...|++..   .+|||++....+...+.++|+.|
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~W   76 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYAR----KCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDW   76 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHHH----hccccCCCcccCCCceeeeeecCCCCCCHHHHHHHH
Confidence            5789999999999986     7789999999999999999    8998887643   69999998775567899999999


Q ss_pred             HhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCC-----eeEEEEEEec
Q 036863           98 MDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG-----THNFVICNYD  153 (164)
Q Consensus        98 ~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~-----~~~~~vC~Y~  153 (164)
                      |+|..+|++..+.+.. +..++||+||||+++++||||++.|..+.     ...++||+|+
T Consensus        77 ~~e~~~y~~~~~~~~~-~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          77 NNEKLDYNYNTNTCAP-NKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             HHHHHhcCCCCCCCCC-CCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            9999999998877665 66899999999999999999999997531     3578999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=1.7e-33  Score=190.03  Aligned_cols=118  Identities=32%  Similarity=0.573  Sum_probs=104.4

Q ss_pred             hHHHHHHHHHHHhhC-CCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCC---CcccEEEEecCCCCCHHHHHHHHHhcC
Q 036863           26 PQDYLKAHNEARASV-GVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVS---KYSETIAWSSQGELTAAEYVKICMDGK  101 (164)
Q Consensus        26 ~~~il~~hN~~R~~~-~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~---~~geni~~~~~~~~~~~~~v~~W~~e~  101 (164)
                      +++||+.||.+|+.+ .|++|+||++|+..||.+|+    +|.+.|+...   .+|||++.+..+ .++.++|+.|++|.
T Consensus         1 ~~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a~----~c~~~h~~~~~~~~~geNi~~~~~~-~~~~~~v~~W~~e~   75 (122)
T cd00168           1 AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSYD-MTGPAAVQAWYNEI   75 (122)
T ss_pred             CcHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh----hccccCCCcccCCCCCceeEEecCC-CCHHHHHHHHHHHH
Confidence            368999999999999 99999999999999999999    8988887653   699999988744 68999999999999


Q ss_pred             CCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEec
Q 036863          102 PLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYD  153 (164)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~  153 (164)
                      .+|++.....   +..++||+||||+++++||||++.|+.++  .++||+|+
T Consensus        76 ~~y~~~~~~~---~~~~~h~~qmvw~~s~~vGca~~~~~~~~--~~~vC~Y~  122 (122)
T cd00168          76 KNYNFGQPGF---SSGTGHYTQVVWKNTTKIGCGVAFCGSNS--YYVVCNYG  122 (122)
T ss_pred             HhCCCCCCCC---CCCccchhhhhcccCCeeeeEEEEcCCCC--EEEEEeCc
Confidence            9999985443   34689999999999999999999999754  78999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=9.1e-33  Score=204.57  Aligned_cols=137  Identities=35%  Similarity=0.662  Sum_probs=117.3

Q ss_pred             CchHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCC-----CCCcccEEEEecCCC------
Q 036863           24 NKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQ-----VSKYSETIAWSSQGE------   87 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~-----~~~~geni~~~~~~~------   87 (164)
                      +.+++|++.||.+|..+.     |++|+||++||..||.||+    +|...|+.     ...+|||++++....      
T Consensus        40 ~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a~----~c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~  115 (225)
T KOG3017|consen   40 NLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWAN----TCPFGHDKCVHTSFGPYGENLAWGWSSNPPLSLD  115 (225)
T ss_pred             HHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHHh----hCCcccCccccccCCCCcccceeeccCCCCcccc
Confidence            677889999999999999     9999999999999999999    88887764     346799999877531      


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCcccCC--CcccchhhhHHhhccCeeeEEEEEcCCCC---eeEEEEEEecCCCCCCC-C
Q 036863           88 LTAAEYVKICMDGKPLYDHNSNTCAIN--GTKCAVYTQVVWRNSVRLGCAKERCNKNG---THNFVICNYDPPGNVFG-Q  161 (164)
Q Consensus        88 ~~~~~~v~~W~~e~~~~~~~~~~~~~~--~~~~~~f~q~iw~~~~~vGCa~~~c~~~~---~~~~~vC~Y~p~gn~~g-~  161 (164)
                      .....+++.|+.|...|++.++.+...  +..++|||||||+++++||||++.|.++.   ...++||+|+|+||..+ +
T Consensus       116 ~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~~~~  195 (225)
T KOG3017|consen  116 TSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNINGE  195 (225)
T ss_pred             ccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCcCCC
Confidence            567789999999999999999877641  55899999999999999999999999873   47899999999965555 6


Q ss_pred             CCC
Q 036863          162 RPY  164 (164)
Q Consensus       162 ~~Y  164 (164)
                      .||
T Consensus       196 ~~y  198 (225)
T KOG3017|consen  196 IPY  198 (225)
T ss_pred             CcC
Confidence            766

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.98  E-value=3e-32  Score=188.30  Aligned_cols=123  Identities=31%  Similarity=0.551  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHhhC------------CCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCC---CcccEEEEecCC----
Q 036863           26 PQDYLKAHNEARASV------------GVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVS---KYSETIAWSSQG----   86 (164)
Q Consensus        26 ~~~il~~hN~~R~~~------------~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~---~~geni~~~~~~----   86 (164)
                      ++.||+.||.+|+.+            .|++|+||++||..|+.+|+    +|...|+...   .+|||++.....    
T Consensus         1 ~~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~   76 (144)
T cd05380           1 RQAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAK----TCVFEHSPCRNTGGVGQNLAAGSSTGSTV   76 (144)
T ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHHh----cCCCcCCcccCCCCCCcEEEEeccCCCCH
Confidence            478999999999999            69999999999999999999    8988887654   699999987644    


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCC-cccCCCcccchhhhHHhhccCeeeEEEEEcCCC-CeeEEEEEEec
Q 036863           87 ELTAAEYVKICMDGKPLYDHNSN-TCAINGTKCAVYTQVVWRNSVRLGCAKERCNKN-GTHNFVICNYD  153 (164)
Q Consensus        87 ~~~~~~~v~~W~~e~~~~~~~~~-~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~-~~~~~~vC~Y~  153 (164)
                      ...+.++|+.||+|...|++... .... ...++||+||||+++++||||++.|... ....++||+|+
T Consensus        77 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~-~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          77 EELAEDAVNAWYNELKDYGFGSNPTNNF-NSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcCccccc-ccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            23688999999999999998875 2333 5579999999999999999999999864 34589999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.88  E-value=3.4e-22  Score=132.50  Aligned_cols=118  Identities=26%  Similarity=0.462  Sum_probs=86.3

Q ss_pred             HHHHHHHH-hhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCCCCCHH---HHHHHHHhcCCCCC
Q 036863           30 LKAHNEAR-ASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAA---EYVKICMDGKPLYD  105 (164)
Q Consensus        30 l~~hN~~R-~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~~~~~~---~~v~~W~~e~~~~~  105 (164)
                      |+.||.+| ....+++|+||++|+..|+.+|+    .|...+......|++............   ..+..|+.+...++
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHAK----YCANSNSLSHDSGENGSQSSRFGSYSDAQVTAVENWYSESKNYN   76 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHHT----TTCSSEETTEESEEEEEEESSTTSHHHHHHHHHHHHHGGGGGEE
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhhH----HhhhhcccccccCCCCccccccccccchhhHHHHHHHhcccccc
Confidence            78999999 77778889999999999999999    776654444467888877663322111   12899999999887


Q ss_pred             CCC--CcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEe
Q 036863          106 HNS--NTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNY  152 (164)
Q Consensus       106 ~~~--~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y  152 (164)
                      ...  ....- ...++||+||+|..+++||||++.|..+....++||.|
T Consensus        77 ~~~~~~~~~~-~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   77 FQNQSIFNSW-MNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             TTCSTEESST-TSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             cccchhhhcc-CCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence            762  11111 44789999999999999999999999875568999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.83  E-value=1e-19  Score=123.56  Aligned_cols=107  Identities=15%  Similarity=0.191  Sum_probs=90.9

Q ss_pred             CchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCC----------------CCcccEEEEecCCC
Q 036863           24 NKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV----------------SKYSETIAWSSQGE   87 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~----------------~~~geni~~~~~~~   87 (164)
                      +.++++|+.||.+|..++++||+||+.|+..|+.||++|+.++.+.|..+                ..+||||+.+.   
T Consensus         3 ~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~---   79 (127)
T TIGR02909         3 AEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGN---   79 (127)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccC---
Confidence            45788999999999999999999999999999999999999988888643                13589998654   


Q ss_pred             CCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEe
Q 036863           88 LTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNY  152 (164)
Q Consensus        88 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y  152 (164)
                      .++..+|+.|++                 +.+|+.+|+|.+.+++|||++.++++.  .++|-.|
T Consensus        80 ~~~~~~v~~W~~-----------------S~gH~~nil~~~~~~~Gvg~~~~~~g~--~y~~q~F  125 (127)
T TIGR02909        80 STVEAVHNAWMN-----------------SPGHRANILNPNYTEIGVGYVEGGSGG--IYWTQMF  125 (127)
T ss_pred             CCHHHHHHHHHc-----------------CHhHHHHHcCCCcCeEeEEEEeCCCCC--eEEEEEe
Confidence            468899999943                 468999999999999999999988764  5555544

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.68  E-value=5.2e-16  Score=103.88  Aligned_cols=104  Identities=23%  Similarity=0.301  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCC----------------cccEEEEecCCCCCH
Q 036863           27 QDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSK----------------YSETIAWSSQGELTA   90 (164)
Q Consensus        27 ~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~----------------~geni~~~~~~~~~~   90 (164)
                      +.+++.+|.+|..++++||+||.+|+..|+.+|.+|+....+.|.+...                +|||+.....   .+
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~---~~   78 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS---TA   78 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC---CH
Confidence            5789999999999999999999999999999999998776677754321                3899877652   68


Q ss_pred             HHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEe
Q 036863           91 AEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNY  152 (164)
Q Consensus        91 ~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y  152 (164)
                      .++++.|++                 ..+|+.+|+|...+++|||+..+.++.  .++|..|
T Consensus        79 ~~~~~~w~~-----------------~~~H~~~ll~~~~~~~Gvg~~~~~~~~--~y~~~~f  121 (122)
T cd05379          79 EAAVDGWMN-----------------SPGHRANILNPDYTEVGVGVAYGGDGG--YYWVQVF  121 (122)
T ss_pred             HHHHHHHhC-----------------CHhHHHHHcCCCcceeeEEEEeCCCCC--eEEEEec
Confidence            899999953                 357999999999999999999988754  4555544

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.31  E-value=1.4e-11  Score=90.20  Aligned_cols=100  Identities=19%  Similarity=0.217  Sum_probs=85.3

Q ss_pred             CCchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCC--------------C--CcccEEEEecCC
Q 036863           23 HNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV--------------S--KYSETIAWSSQG   86 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~--------------~--~~geni~~~~~~   86 (164)
                      ++..+.+++.+|.+|..+++++|.||.+|+..|+.++.+|+++..+.|..+              .  ..||||..+...
T Consensus        78 ~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g~~~  157 (207)
T COG2340          78 AQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYGSND  157 (207)
T ss_pred             chhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecCCCC
Confidence            367788999999999999999999999999999999999999999998653              1  479999887622


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCC
Q 036863           87 ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNK  141 (164)
Q Consensus        87 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~  141 (164)
                        ..+.+|+.|                 -.+.+|-.+|+-...+.+|-|+..-..
T Consensus       158 --~~~~~v~~W-----------------l~S~gH~~nll~~~~~~~Gv~~~~~~~  193 (207)
T COG2340         158 --PPEAAVDGW-----------------LNSPGHRKNLLNPAYTEIGVGVAYDAS  193 (207)
T ss_pred             --chHHHHHHh-----------------cCChhhhhhccCcchhheeEEEEecCC
Confidence              127999999                 446689999999999999999998554

>PF11054 Surface_antigen: Sporozoite TA4 surface antigen; InterPro: IPR021288 This family of proteins is a Eukaryotic family of surface antigens

Probab=89.51  E-value=7.3  Score=29.25  Aligned_cols=134  Identities=15%  Similarity=0.185  Sum_probs=78.5

Q ss_pred             hHHHHHHHHHHHhhCCCCC----------cc-c-CHHHHHHHHHHHHhhcCCCCCccCCC-CCcc----------cEEEE
Q 036863           26 PQDYLKAHNEARASVGVGP----------MS-W-DYKLADYSHKHAQKLKGNCNSKKTQV-SKYS----------ETIAW   82 (164)
Q Consensus        26 ~~~il~~hN~~R~~~~m~~----------L~-W-d~~La~~Aq~~a~~~~~~C~~~~~~~-~~~g----------eni~~   82 (164)
                      .-++|+..|..|...+++.          |. . +++| .....|-+    -|....++. ....          -+.+.
T Consensus        35 ~~~CL~E~NaaReAAGL~~F~~A~~~~~~Lp~~~~~e~-~~~t~W~~----iC~~l~pt~~~~~~~~~~~~pf~~GTyAf  109 (254)
T PF11054_consen   35 SVECLSEMNAAREAAGLANFTEATSDDQKLPEPGSEEL-TDDTLWKK----ICEHLIPTQAEPAAEASKLNPFKDGTYAF  109 (254)
T ss_pred             chhHHHHHHHHHHhcCchhhHhhcCCcccCCCCCchhc-cchhhHHH----HHHHhcCCCCcchhhccccCcCCCCceEe
Confidence            4569999999999988432          11 1 3333 44455665    564433211 1111          12222


Q ss_pred             e--cCCCCCHHHHHHHHHhcCCCCCCCCCcccCC-----CcccchhhhHHhhccCe-eeEEEEEcCCC------------
Q 036863           83 S--SQGELTAAEYVKICMDGKPLYDHNSNTCAIN-----GTKCAVYTQVVWRNSVR-LGCAKERCNKN------------  142 (164)
Q Consensus        83 ~--~~~~~~~~~~v~~W~~e~~~~~~~~~~~~~~-----~~~~~~f~q~iw~~~~~-vGCa~~~c~~~------------  142 (164)
                      .  .....+..++|+.|=...++|+--.+.....     ++..=.|.-|-..+.+. .-|.+..|.+.            
T Consensus       110 ~~lt~~~~dCk~aVdYWKaafknF~glPPs~~~~~~lYndqdnVSFVALYNPs~~atAdC~vvTCt~tt~~~~~~~~~~~  189 (254)
T PF11054_consen  110 KSLTDEKPDCKEAVDYWKAAFKNFTGLPPSKTAANKLYNDQDNVSFVALYNPSSSATADCRVVTCTQTTSNTAGGSRLQG  189 (254)
T ss_pred             eeccCCCCChHHHHHHHHHHHhhcCCCCCChhhccccccCCcceeEEEEeCCCCCCcceeEEEeCCCCCccCCCcccccC
Confidence            2  2246689999999987777776421111110     22234566666655555 57999999541            


Q ss_pred             ------CeeEEEEEEecCCCC-CCCCCCC
Q 036863          143 ------GTHNFVICNYDPPGN-VFGQRPY  164 (164)
Q Consensus       143 ------~~~~~~vC~Y~p~gn-~~g~~~Y  164 (164)
                            ...+.++|.=.|..- ..|..||
T Consensus       190 d~~~~~~~gyAliCkT~P~Al~~~~saPF  218 (254)
T PF11054_consen  190 DSDSESKTGYALICKTMPAALASDGSAPF  218 (254)
T ss_pred             CCcccccceEEEEEecCchhhcCCCCCCC
Confidence                  145789999999776 6777775

One of the better characterised members of the family is the sporulated TA4 antigen. The TA4 gene encodes a single polypeptide of 25 kDa which contains a 17 and a 8kDa polypeptide [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	164
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		9e-31
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		6e-06
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		2e-05
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		7e-05
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		9e-05
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		9e-05
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		3e-04
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		7e-04

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/141 (49%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Query: 23  HNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAW 82
            N PQDYL  HN+ARA VGVGPMSWD  LA  +  +A    G+CN      S   E +A 
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIH---SGAGENLA- 56
Query: 83  SSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKN 142
              G+ T    V++ +  +P Y++ +N C + G KC  YTQVVWRNSVRLGC + RCN N
Sbjct: 57  KGGGDFTGRAAVQLWVSERPSYNYATNQC-VGGKKCRHYTQVVWRNSVRLGCGRARCN-N 114
Query: 143 GTHNFVICNYDPPGNVFGQRP 163
           G   F+ CNYDP GN  GQRP
Sbjct: 115 GWW-FISCNYDPVGNWIGQRP 134

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 27  QDYLKAHNEARASV-----GVGPMSWDYKLADYSHKHAQKLKGNCNSK-------KTQVS 74
           +D ++ HN+ R+ V      +  M+WD  LA  +   A   + + N++           +
Sbjct: 20  KDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFT 79
Query: 75  KYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGC 134
              E I   S    + +  +    D    YD  +  C      C  YTQVVW +S ++GC
Sbjct: 80  SLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRICK---KVCGHYTQVVWADSYKVGC 136
Query: 135 AKERCNK--------NGTHNFVICNYDPPGN 157
           A + C K        NG H   ICNY P GN
Sbjct: 137 AVQFCPKVSGFDALSNGAH--FICNYGPGGN 165

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           YTQ+VW+ +V+LGC  E C+      +V+C Y P GN+ G+  Y
Sbjct: 135 YTQMVWQETVKLGCYVEACS---NMCYVVCQYGPAGNMMGKDIY 175

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 19  LSSAHNKPQDYLKAHNEARASVGVGP-------MSWDYKLADYSHKHAQKLKGN---C-N 67
           + + HN+ +  + +  E R + G  P       ++WD +LA  + + A +       C N
Sbjct: 46  IVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDACRN 105
Query: 68  SKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAING----TKCAVYTQ 123
            ++  V +     + S + + T  E + +  +    +D+   +   +      K   YTQ
Sbjct: 106 VERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQ 165
Query: 124 VVWRNSVRLGCAKERCNK--NGTHNFVICNYDPPGNVFGQRPY 164
           +VW  + ++GC +    +  N T ++++CNY P GNV G   Y
Sbjct: 166 IVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIY 208

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ 161
           YTQ+VW  S R+GCA   C  +    F +C Y P GN  G+
Sbjct: 116 YTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGK 156

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 121 YTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ 161
           YTQ+VW  S R GCA   C  +    F +C Y P GN+ G+
Sbjct: 116 YTQIVWYKSYRAGCAAAYCPSSKYSYFYVCQYCPAGNIIGK 156

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 28  DYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGN---CNSKKTQVSKYSETIAWSS 84
           + LKAHNE R   GV P+     L   + ++++ L       +S ++   +  E +AW+S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQXGENLAWAS 71
Query: 85  QGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGT 144
             + T  E          + ++N        +    +T +VW+N+ ++G  K   +   +
Sbjct: 72  YDQ-TGKEVADRWYS--EIKNYNFQQPGFT-SGTGHFTAMVWKNTKKMGVGKASASDGSS 127
Query: 145 HNFVICNYDPPGNV 158
             FV+  Y P GNV
Sbjct: 128 --FVVARYFPAGNV 139

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 28  DYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGN---CNSKKTQVSKYSETIAWSS 84
           + LKAHNE R   GV P+     L   + ++++ L       +S ++   +  E +AW+S
Sbjct: 12  EVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71
Query: 85  QGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGT 144
             + T  E          + ++N        +    +T +VW+N+ ++G  K   +   +
Sbjct: 72  YDQ-TGKEVADRWYS--EIKNYNFQQPGFT-SGTGHFTAMVWKNTKKMGVGKASASDGSS 127
Query: 145 HNFVICNYDPPGNV 158
             FV+  Y P GNV
Sbjct: 128 --FVVARYFPAGNV 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	9e-48
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	1e-44
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	2e-33
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	5e-32
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	6e-32
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	2e-31
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	4e-31
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	3e-28
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-25
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-22
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	2e-15
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	9e-10

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  150 bits (381), Expect = 9e-48
 Identities = 69/142 (48%), Positives = 84/142 (59%), Gaps = 7/142 (4%)

Query: 23  HNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAW 82
            N PQDYL  HN+ARA VGVGPMSWD  LA  +  +A    G+CN      S   E +A 
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCN---LIHSGAGENLAK 57

Query: 83  SSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKN 142
              G+ T    V++ +  +P Y++ +N C   G KC  YTQVVWRNSVRLGC + RCN  
Sbjct: 58  GG-GDFTGRAAVQLWVSERPSYNYATNQCV-GGKKCRHYTQVVWRNSVRLGCGRARCNNG 115

Query: 143 GTHNFVICNYDPPGNVFGQRPY 164
               F+ CNYDP GN  GQRPY
Sbjct: 116 WW--FISCNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  143 bits (362), Expect = 1e-44
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 9/148 (6%)

Query: 20  SSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCN---SKKTQVSKY 76
           S++     + LKAHNE R   GV P+     L   + ++++ L        S ++   + 
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQC 63

Query: 77  SETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAK 136
            E +AW+S  + T  E           Y+               +T +VW+N+ ++G  K
Sbjct: 64  GENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSG---TGHFTAMVWKNTKKMGVGK 119

Query: 137 ERCNKNGTHNFVICNYDPPGNVFGQRPY 164
              +   +  FV+  Y P GNV  +  +
Sbjct: 120 ASASDGSS--FVVARYFPAGNVVNEGFF 145

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =  116 bits (292), Expect = 2e-33
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 22/163 (13%)

Query: 24  NKPQDYLKAHNEARASVGVG-----------------PMSWDYKLADYSHKHAQKLKGNC 66
            + QD LK HN+ R  +  G                  + W+ +LA  +   A + +   
Sbjct: 44  QEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGH 103

Query: 67  NS-KKTQVSKYSETIAWSS---QGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYT 122
           ++ +     +  + +A +           + VK+  D    Y+        +  K   YT
Sbjct: 104 DTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYT 163

Query: 123 QVVWRNSVRLGCAKERCNKNGTHN-FVICNYDPPGNVFGQRPY 164
           Q+VW N+  +GC   +  +   H  +++CNY P GN   +  Y
Sbjct: 164 QMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  113 bits (283), Expect = 5e-32
 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 12/157 (7%)

Query: 18  HLSSAHNKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLK---GNCNSK 69
             +    K ++ +  HN  R  V      +  M W  + A  + + A          N +
Sbjct: 7   ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLR 66

Query: 70  KTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNS 129
             +  +  E+I  SS    T  E + +  D    + +        G+    YTQ+VW  +
Sbjct: 67  VLEGIQCGESIYMSS-NARTWTEIIHLWHDEYKNFVYGVGASP-PGSVTGHYTQIVWYQT 124

Query: 130 VRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ--RPY 164
            R GCA   C  +    F +C Y P GN  G+   PY
Sbjct: 125 YRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  112 bits (281), Expect = 6e-32
 Identities = 40/167 (23%), Positives = 60/167 (35%), Gaps = 22/167 (13%)

Query: 16  TIHLSSAHNKPQDYLKAHNEARASVGVGP-----MSWDYKLADYSHKHAQKLK------- 63
            +      +  +D ++ HN+ R+ V         M+WD  LA  +   A   +       
Sbjct: 9   ILPDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRL 68

Query: 64  GNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQ 123
              +      +   E I   S    + +  +    D    YD  +  C      C  YTQ
Sbjct: 69  KPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRIC---KKVCGHYTQ 125

Query: 124 VVWRNSVRLGCAKERCNK------NGTHNFVICNYDPPGNVFGQRPY 164
           VVW +S ++GCA + C K             ICNY P GN     PY
Sbjct: 126 VVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTWPY 171

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  111 bits (278), Expect = 2e-31
 Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 14/154 (9%)

Query: 21  SAHNKPQDYLKAHNEARASV-----GVGPMSWDYKLADYSHKHAQKLK---GNCNSKKTQ 72
           +  N  ++ +  HN  R SV      +  M W+   A  + + A +        N++   
Sbjct: 1   NKKNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVG 60

Query: 73  VSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRL 132
             +  E I  SS      +  V+   D    + +        G+    YTQVVW  S  +
Sbjct: 61  KLRCGENIFMSS-QPFPWSGVVQAWYDEIKNFVYGIGAKP-PGSVIGHYTQVVWYKSHLI 118

Query: 133 GCAKERCNKNGTHNFVICNYDPPGNVFGQ--RPY 164
           GCA  +C+ +      +C Y P GN+ G    PY
Sbjct: 119 GCASAKCSSSKY--LYVCQYCPAGNIRGSIATPY 150

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score =  109 bits (275), Expect = 4e-31
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 28/165 (16%)

Query: 24  NKPQDYLKAHNEARASVGVG-----------------PMSWDYKLADYSHKHAQKLKGNC 66
              Q +L+ HN  R+SV +G                  M++D ++   +  +A++     
Sbjct: 15  EARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVFKH 74

Query: 67  NSKKTQVSKYSETIAWSSQGELTAAEYVKICMDG----KPLYDHNSNTC---AINGTKCA 119
            S+  Q     E I  SS   +  A+  +                 N      +      
Sbjct: 75  -SQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVG 133

Query: 120 VYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
            YTQ+VW+ +V+LGC  E C+      +V+C Y P GN+ G+  Y
Sbjct: 134 HYTQMVWQETVKLGCYVEACSNM---CYVVCQYGPAGNMMGKDIY 175

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score =  103 bits (257), Expect = 3e-28
 Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 27/165 (16%)

Query: 27  QDYLKAHNEARASVGVG-----------------PMSWDYKLADYSHKHAQKLKGNCNS- 68
              +  HNE R  V  G                  ++WD +LA  + + A +     ++ 
Sbjct: 44  DAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDAC 103

Query: 69  KKTQVSKYSETIAWSS---QGELTAAEYVKICMDGKPLYDHNSNTCAI----NGTKCAVY 121
           +  +     + IA +S   + + T  E + +  +    +D+   +          K   Y
Sbjct: 104 RNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHY 163

Query: 122 TQVVWRNSVRLGCAKERCNK--NGTHNFVICNYDPPGNVFGQRPY 164
           TQ+VW  + ++GC +    +  N T ++++CNY P GNV G   Y
Sbjct: 164 TQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIY 208

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 99.4 bits (247), Expect = 2e-25
 Identities = 36/169 (21%), Positives = 54/169 (31%), Gaps = 31/169 (18%)

Query: 23  HNKPQDYLKAHNEARASVGVG-----------------PMSWDYKLADYSHKHAQKLKGN 65
            +    +L  HNE R+SV  G                  M +D ++   + +H  K    
Sbjct: 235 DSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKCVYQ 294

Query: 66  CNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDG----KPLYDHNSNTCAI------NG 115
            +S         E I  +S  +    +  K            Y    +            
Sbjct: 295 -HSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPN 353

Query: 116 TKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
            +   YTQ+ W  + +LGCA   CN      F +C Y P GN  G   Y
Sbjct: 354 MQIGHYTQMAWDTTYKLGCAVVFCNDF---TFGVCQYGPGGNYMGHVIY 399

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 91.3 bits (226), Expect = 2e-22
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 30/160 (18%)

Query: 27  QDYLKAHNEARASVGVGP----------------MSWDYKLADYSHKHAQKLKGNCNSKK 70
           Q +L  HN AR  V  G                 +SWD  +        Q     C S  
Sbjct: 38  QAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQS----CPSGF 93

Query: 71  TQVSKYSETIA--WSSQGELTAAEYVKICMDG----KPLYDHNSNTCAINGTKCAVYTQV 124
             +   ++      SS G    +  ++  + G            +     G     ++ +
Sbjct: 94  AGIQGVAQNTMSWSSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKY-TGGGLFAFSNM 152

Query: 125 VWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY 164
           V+  + +LGCA + C   GT   V C Y+  G +  Q  +
Sbjct: 153 VYSETTKLGCAYKVC---GTKLAVSCIYNGVGYITNQPMW 189

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 69.7 bits (170), Expect = 2e-15
 Identities = 25/160 (15%), Positives = 46/160 (28%), Gaps = 23/160 (14%)

Query: 27  QDYLKAHNEARASVGVG-----------PMSWDYKLADYSHKHAQKLKGNCNS-KKTQVS 74
            + L   N+ R  V  G            + WD +LA  + +H +   G  ++ + T+  
Sbjct: 42  NEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHACRNTERF 101

Query: 75  KYSETIAWSSQGEL--TAAEYVKICMDGKPLYDHNSNTCAIN-------GTKCAVYTQVV 125
                + +   G+      E +   +    L  HN     I                  +
Sbjct: 102 WLPGQLNFKYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAI 161

Query: 126 WRNSVRLGCAKERCNKNGTHNF-VICNYDPPGNVFGQRPY 164
                 +GC              + CN+    N  G+  Y
Sbjct: 162 SDRVTAVGCGLTTWEDGAKARALLTCNFS-SQNTRGRPVY 200

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 54.3 bits (130), Expect = 9e-10
 Identities = 17/153 (11%), Positives = 36/153 (23%), Gaps = 37/153 (24%)

Query: 27  QDYLKAHNEARASVGVG------------PMSWDYKLADYSHKHAQKLKGNCNSKKTQVS 74
           +     HN  R  +  G             + +D  L + + K  +              
Sbjct: 20  EAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-----LPGYADLHH 74

Query: 75  KYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGC 134
           +     +   +G         +    +      ++             QVV+  + R GC
Sbjct: 75  RGVTRFSGDYEGS----AISALKEILETFSADKNS-----------MRQVVYPKATRFGC 119

Query: 135 AKERCNKNG---THNFVICNYDPPGNVFGQRPY 164
           +                +C YD          +
Sbjct: 120 SGRLRRNKKTGMRRMDWVCVYDKKPK--DGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.97
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.66
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.43
3plv_C	21	66 kDa U4/U6.U5 small nuclear ribonucleoprotein C;	82.35

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=4.2e-46  Score=254.87  Aligned_cols=134  Identities=51%  Similarity=0.937  Sum_probs=125.3

Q ss_pred             CchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCCCCCHHHHHHHHHhcCCC
Q 036863           24 NKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPL  103 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~~~~~~~~v~~W~~e~~~  103 (164)
                      +.+++||+.||.+|+.++|++|+||++|+..||.||++|+++|.+.|+++   ||||+++. ...++.++|+.|++|.++
T Consensus         2 ~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~---GENla~~~-~~~~~~~~v~~W~~E~~~   77 (135)
T 1cfe_A            2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA---GENLAKGG-GDFTGRAAVQLWVSERPS   77 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSS---SBCCEECS-SSCCHHHHHHHHHTTGGG
T ss_pred             cHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCC---CeEEEEec-CCCCHHHHHHHHHhHHhh
Confidence            56899999999999999999999999999999999999999999999875   99999876 567899999999999999


Q ss_pred             CCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCCCCC
Q 036863          104 YDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY  164 (164)
Q Consensus       104 ~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      |++..+.+.. ++.++|||||||+++++||||++.|..+.  .++||+|+|+||+.|++||
T Consensus        78 y~~~~~~~~~-~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~--~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           78 YNYATNQCVG-GKKCRHYTQVVWRNSVRLGCGRARCNNGW--WFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             EEGGGTEECS-SSCCSSHHHHHCTTCCEEEEEEEECTTSS--EEEEEECSSCCSCTTSCCC
T ss_pred             CCCCCCCcCC-CCcccceeeeEEccCcEEeEEEEEeCCCC--EEEEEEEeCCCCCCCCCCC
Confidence            9999887776 66899999999999999999999998764  8999999999999999998

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=4e-45  Score=255.08  Aligned_cols=137  Identities=24%  Similarity=0.396  Sum_probs=124.2

Q ss_pred             CCCchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCC---CCcccEEEEecCCCCCHHHHHHHHH
Q 036863           22 AHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV---SKYSETIAWSSQGELTAAEYVKICM   98 (164)
Q Consensus        22 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~---~~~geni~~~~~~~~~~~~~v~~W~   98 (164)
                      +++++++||+.||.+|+.+++++|+||++|+..||.||++++.+|.+.|++.   ..+||||+.+. ...++.++|+.||
T Consensus         6 ~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~-~~~~~~~~v~~W~   84 (154)
T 4aiw_A            6 SKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWY   84 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEES-SCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecC-CCCCHHHHHHHHH
Confidence            4478999999999999999999999999999999999999999999999742   36899999876 3467899999999


Q ss_pred             hcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCCCCC
Q 036863           99 DGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY  164 (164)
Q Consensus        99 ~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      +|.++|+|..+.+..   .++|||||||++|++||||++.|.++.  .++||+|+|+||+.|+.||
T Consensus        85 ~E~~~y~~~~~~~~~---~~gHfTQ~VW~~t~~vGCg~a~c~~~~--~~vVC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           85 SEIKNYNFQQPGFTS---GTGHFTAMVWKNTKKMGVGKASASDGS--SFVVARYFPAGNVVNEGFF  145 (154)
T ss_dssp             GGGGGCCTTSCSCCT---TTHHHHHHHCTTCCEEEEEEEECTTSC--EEEEEEEESCCCCCSTTHH
T ss_pred             HHhhhcccCCCCcCC---CcCCeeeeehhhhceeeeEEEEcCCCC--EEEEEEEeCCCccCCccch
Confidence            999999999888765   699999999999999999999999875  7899999999999998776

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=1e-39  Score=238.27  Aligned_cols=137  Identities=24%  Similarity=0.454  Sum_probs=116.2

Q ss_pred             CchHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCCC-----CCcccEEE
Q 036863           24 NKPQDYLKAHNEARASVG-----------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV-----SKYSETIA   81 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~-----~~~geni~   81 (164)
                      ++++.||+.||.+|+.++                 |++|+||++||..||.||+    +|.+.|+..     ..+||||+
T Consensus        44 ~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~GeNl~  119 (209)
T 1qnx_A           44 QEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVGQNVA  119 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHh----cCcccCCCccCCCCCCCccEEE
Confidence            568899999999999973                 7899999999999999999    899998752     24899999


Q ss_pred             EecCC---CCCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCC-eeEEEEEEecCCCC
Q 036863           82 WSSQG---ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG-THNFVICNYDPPGN  157 (164)
Q Consensus        82 ~~~~~---~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~-~~~~~vC~Y~p~gn  157 (164)
                      +....   ..++.++|+.||+|.++|++..+.....+..++|||||||+++++||||++.|..++ ...++||+|+|+||
T Consensus       120 ~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~GN  199 (209)
T 1qnx_A          120 LTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGN  199 (209)
T ss_dssp             EEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred             EecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCCCC
Confidence            86543   246889999999999999998642221124689999999999999999999998654 35789999999999


Q ss_pred             CCCCCCC
Q 036863          158 VFGQRPY  164 (164)
Q Consensus       158 ~~g~~~Y  164 (164)
                      +.|++||
T Consensus       200 ~~g~~~Y  206 (209)
T 1qnx_A          200 FKNEELY  206 (209)
T ss_dssp             CTTSCSS
T ss_pred             CCCCCCC
Confidence            9999998

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=2.2e-39  Score=238.12  Aligned_cols=136  Identities=27%  Similarity=0.485  Sum_probs=120.1

Q ss_pred             CCchHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCC-------CcccEEEEecCCCCCH
Q 036863           23 HNKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVS-------KYSETIAWSSQGELTA   90 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~-------~~geni~~~~~~~~~~   90 (164)
                      ++.+++||+.||.+|+.+.     |++|+||++||..||.||+    +|.+.|++..       .+||||+++.. ..++
T Consensus        12 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~-~~~~   86 (221)
T 1xta_A           12 KKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWAN----TCSLNHSPDNLRVLEGIQCGESIYMSSN-ARTW   86 (221)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGCEETTEECEEEEEEESS-CCCH
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHh----cCCCCCcCccccccCCCCCceEEEeecC-CCCH
Confidence            3678999999999999996     7799999999999999999    8999997531       48999998763 3468


Q ss_pred             HHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCC--CCC
Q 036863           91 AEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ--RPY  164 (164)
Q Consensus        91 ~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      .++|+.||+|.++|++..+.+.. +..++|||||||+++++||||++.|..+....++||+|+|+||+.|+  +||
T Consensus        87 ~~av~~W~~E~~~y~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           87 TEIIHLWHDEYKNFVYGVGASPP-GSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             HHHHHHHHGGGGGEETTTEESST-TCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCC-CCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence            99999999999999998866654 56899999999999999999999998764458999999999999999  888

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=2.4e-39  Score=236.26  Aligned_cols=133  Identities=29%  Similarity=0.502  Sum_probs=118.5

Q ss_pred             CchHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCC-------CcccEEEEecCCCCCHH
Q 036863           24 NKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVS-------KYSETIAWSSQGELTAA   91 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~-------~~geni~~~~~~~~~~~   91 (164)
                      +.+++||+.||.+|+.++     |++|+||++||..||.||+    +|.+.|++..       .+||||+++.. ..++.
T Consensus         4 ~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~-~~~~~   78 (210)
T 2ddb_A            4 NYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWAD----RCTFAHSPPNTRTVGKLRCGENIFMSSQ-PFPWS   78 (210)
T ss_dssp             CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGSEETTEECEEEEEEESS-CCCHH
T ss_pred             HHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHh----cCCCCCCCccccccCCCCCcceEEEEcC-CCCHH
Confidence            678999999999999986     7799999999999999999    8999998531       48999998763 34689


Q ss_pred             HHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCC--CCC
Q 036863           92 EYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ--RPY  164 (164)
Q Consensus        92 ~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      ++|+.||+|.++|++..+.+.. +..++|||||||+++++||||++.|..+  ..++||+|+|+||+.|+  +||
T Consensus        79 ~av~~W~~E~~~y~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~--~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           79 GVVQAWYDEIKNFVYGIGAKPP-GSVIGHYTQVVWYKSHLIGCASAKCSSS--KYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHHHHHGGGGGEETTTEESST-TSCCHHHHHHTCTTCCEEEEEEEEEETT--EEEEEEEEESCSSSTTCTTCSS
T ss_pred             HHHHHHHHHhhhCCCCCCCCCC-CCcccchhhhhhhhccEeeEEEEEcCCC--CEEEEEEeeCCCCCCCCccCCC
Confidence            9999999999999998766554 5689999999999999999999999876  48999999999999999  888

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=4.6e-39  Score=232.71  Aligned_cols=137  Identities=28%  Similarity=0.489  Sum_probs=116.2

Q ss_pred             CCCCchHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCC---CCCcccEE
Q 036863           21 SAHNKPQDYLKAHNEARASVG-----------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQ---VSKYSETI   80 (164)
Q Consensus        21 ~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~---~~~~geni   80 (164)
                      .++++++.||+.||.+|+.++                 |++|+||++||..||.||+    +|.+.|+.   ...+|||+
T Consensus        12 lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~GeNl   87 (196)
T 1u53_A           12 MSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAK----QCVFKHSQPNQRKGLGENI   87 (196)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCCCCCCGGGSTTCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHH----hCccCCCccccCCCCCeEE
Confidence            334678999999999999982                 6699999999999999999    89999983   33699999


Q ss_pred             EEecCCCC----CHHHHHHHHHhcCCCCCCCC-CcccC--CCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEec
Q 036863           81 AWSSQGEL----TAAEYVKICMDGKPLYDHNS-NTCAI--NGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYD  153 (164)
Q Consensus        81 ~~~~~~~~----~~~~~v~~W~~e~~~~~~~~-~~~~~--~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~  153 (164)
                      ++......    .+.++|+.||+|.++|++.. +.+..  .+..++|||||||+++++||||++.|.+.   .++||+|+
T Consensus        88 ~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~~---~~~VC~Y~  164 (196)
T 1u53_A           88 FMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSNM---CYVVCQYG  164 (196)
T ss_dssp             EEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSSC---EEEEEEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCCC---EEEEEEeC
Confidence            97754322    35889999999999999887 44431  04579999999999999999999999863   89999999


Q ss_pred             CCCCCCCCCCC
Q 036863          154 PPGNVFGQRPY  164 (164)
Q Consensus       154 p~gn~~g~~~Y  164 (164)
                      |+||+.|++||
T Consensus       165 p~GN~~g~~~Y  175 (196)
T 1u53_A          165 PAGNMMGKDIY  175 (196)
T ss_dssp             SCCCCTTSBSS
T ss_pred             CCCCCCCCcCC
Confidence            99999999998

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=1.1e-38  Score=232.26  Aligned_cols=134  Identities=31%  Similarity=0.542  Sum_probs=118.0

Q ss_pred             CCchHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCC-----------CCcccEEEEecCC
Q 036863           23 HNKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV-----------SKYSETIAWSSQG   86 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~-----------~~~geni~~~~~~   86 (164)
                      .+++++||+.||.+|+.+.     |.+|+||++||..||.||+    +|.+.|+..           ..+||||+.+...
T Consensus        16 ~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~~   91 (205)
T 3q2u_A           16 EDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVP   91 (205)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TCBSSCCTTSSTTCCSSTTCSSCEEEEEEEETT
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHH----hCCCCCCccccccccccCCCCCCceEEEEccCC
Confidence            3688999999999999986     8899999999999999999    899888642           3689999987756


Q ss_pred             CCCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCC------CeeEEEEEEecCCCCCCC
Q 036863           87 ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKN------GTHNFVICNYDPPGNVFG  160 (164)
Q Consensus        87 ~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~------~~~~~~vC~Y~p~gn~~g  160 (164)
                      .+++.++|+.||+|.++|++..+.+.   ..++|||||||+.+++||||++.|...      ....++||+|+|+||+ +
T Consensus        92 ~~~~~~~v~~W~~E~~~y~~~~~~~~---~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~  167 (205)
T 3q2u_A           92 IFSVSSAITNWYDEIQDYDFKTRICK---KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P  167 (205)
T ss_dssp             TCCHHHHHHHHHGGGGGEETTTTEES---SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-S
T ss_pred             CCCHHHHHHHHHhHHHhcCCCCCCcc---chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-C
Confidence            67899999999999999999887764   379999999999999999999999852      1357899999999999 7


Q ss_pred             CCCC
Q 036863          161 QRPY  164 (164)
Q Consensus       161 ~~~Y  164 (164)
                      ++||
T Consensus       168 ~~pY  171 (205)
T 3q2u_A          168 TWPY  171 (205)
T ss_dssp             SCSS
T ss_pred             CCCC
Confidence            8888

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=6.9e-39  Score=235.24  Aligned_cols=136  Identities=26%  Similarity=0.512  Sum_probs=114.4

Q ss_pred             CchHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCC-----CCCcccEEE
Q 036863           24 NKPQDYLKAHNEARASVG-----------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQ-----VSKYSETIA   81 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~-----~~~~geni~   81 (164)
                      ++++.||+.||.+|+.++                 |++|+||++||..||.||+    +|.+.|+.     ...+||||+
T Consensus        41 ~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~Hs~c~~~~~~~~GeNl~  116 (218)
T 2vzn_A           41 AEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWAN----QCTFEHDACRNVERFAVGQNIA  116 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHT----TCCSSCCSCCCCSSSCCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHH----hCCcCCCCCCCCccCCCceEEE
Confidence            568899999999999973                 7899999999999999999    89999876     224899999


Q ss_pred             EecCC---CCCHHHHHHHHHhcCCCCCCCCC---ccc--CCCcccchhhhHHhhccCeeeEEEEEcCC-C-CeeEEEEEE
Q 036863           82 WSSQG---ELTAAEYVKICMDGKPLYDHNSN---TCA--INGTKCAVYTQVVWRNSVRLGCAKERCNK-N-GTHNFVICN  151 (164)
Q Consensus        82 ~~~~~---~~~~~~~v~~W~~e~~~~~~~~~---~~~--~~~~~~~~f~q~iw~~~~~vGCa~~~c~~-~-~~~~~~vC~  151 (164)
                      +....   .....++|+.||+|.++|++...   ...  . +..++|||||||+++++||||++.|.. + ....++||+
T Consensus       117 ~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC~  195 (218)
T 2vzn_A          117 ATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNI-LMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCN  195 (218)
T ss_dssp             EEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHH-HHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEEE
T ss_pred             EEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCccc-CCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEEE
Confidence            87543   23567999999999999998732   111  1 246899999999999999999999976 3 346799999


Q ss_pred             ecCCCCCCCCCCC
Q 036863          152 YDPPGNVFGQRPY  164 (164)
Q Consensus       152 Y~p~gn~~g~~~Y  164 (164)
                      |+|+||+.|++||
T Consensus       196 Y~P~GN~~g~~~y  208 (218)
T 2vzn_A          196 YGPAGNVLGAPIY  208 (218)
T ss_dssp             EESCCCCTTSCSS
T ss_pred             ECCCCCCCCCccc
Confidence            9999999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=8.3e-38  Score=249.43  Aligned_cols=133  Identities=20%  Similarity=0.334  Sum_probs=116.8

Q ss_pred             CchHHHHHHHHHHHhhCC----------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCC-
Q 036863           24 NKPQDYLKAHNEARASVG----------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQG-   86 (164)
Q Consensus        24 ~~~~~il~~hN~~R~~~~----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~-   86 (164)
                      +.|+.||+.||.+|+.++                |++|+||++||..||.||+    +|...|+....+|||++..... 
T Consensus        35 ~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~----~C~~~h~~~~~~GeNl~~~~~~~  110 (424)
T 3nt8_A           35 SDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQ----SCPSGFAGIQGVAQNTMSWSSSG  110 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCT----TCCSSCCCCTTCEEEEEEEECTT
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHh----hCCCcCCCCCCceeeEEeccccC
Confidence            578899999999999992                8899999999999999999    9999998877899999876522 


Q ss_pred             -----CCCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCC
Q 036863           87 -----ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ  161 (164)
Q Consensus        87 -----~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~  161 (164)
                           ...+.++|+.||+|.++|++....... +..++|||||||+++++||||++.|..   ..++||+|+|+||+.|+
T Consensus       111 ~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~-~~~~ghfTqmvw~~t~~vGCa~~~c~~---~~~~VC~Y~p~GN~~g~  186 (424)
T 3nt8_A          111 GYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYT-GGGLFAFSNMVYSETTKLGCAYKVCGT---KLAVSCIYNGVGYITNQ  186 (424)
T ss_dssp             CCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCC-CTTCHHHHHHHCTTCCEEEEEEEEETT---EEEEEEEESSCCCSTTC
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHcCCcccccCC-CcchHHHHHHHHHhcCeeceEEEEeCC---cEEEEEEECCCCCcccc
Confidence                 113688999999999999988644443 447899999999999999999999987   48999999999999999


Q ss_pred             CCC
Q 036863          162 RPY  164 (164)
Q Consensus       162 ~~Y  164 (164)
                      +||
T Consensus       187 ~~Y  189 (424)
T 3nt8_A          187 PMW  189 (424)
T ss_dssp             BSS
T ss_pred             ccc
Confidence            998

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=7.3e-37  Score=226.55  Aligned_cols=136  Identities=15%  Similarity=0.219  Sum_probs=112.7

Q ss_pred             CCchHHHHHHHHHHHhhC-----------CCCCcccCHHHHHHHHHHHHhhcCCCCCccCC---C---CCcccEEEEecC
Q 036863           23 HNKPQDYLKAHNEARASV-----------GVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQ---V---SKYSETIAWSSQ   85 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~-----------~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~---~---~~~geni~~~~~   85 (164)
                      +++++.||+.||.+|+.+           .|++|+||++||..||.||+    +|.+.|+.   .   ..+|||++..+.
T Consensus        38 ~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~c~~~~~~~~~Gen~~~~~~  113 (233)
T 3u3l_C           38 KEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTK----GCVGETHACRNTERFWLPGQLNFKYSG  113 (233)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHT----TCCSCCCCBCCCSSCSSCEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHH----hCCCCCCcccccCcCCcCeEEEEEecC
Confidence            367899999999999999           49999999999999999999    89998875   1   158998876653


Q ss_pred             CC-C----CHHHHHHHHHhcCCCCCCCC----CcccCCCcccchhhhHHhhccCeeeEEEEEcCCCC-eeEEEEEEecCC
Q 036863           86 GE-L----TAAEYVKICMDGKPLYDHNS----NTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG-THNFVICNYDPP  155 (164)
Q Consensus        86 ~~-~----~~~~~v~~W~~e~~~~~~~~----~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~-~~~~~vC~Y~p~  155 (164)
                      .. .    .+.++|+.||+|.++|++..    +.... +..++|||||||+++++||||++.|..++ ...++||+|+| 
T Consensus       114 ~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~-~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p-  191 (233)
T 3u3l_C          114 DKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGP-NGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-  191 (233)
T ss_dssp             SSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC---CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCccc-ccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-
Confidence            32 2    25789999999999998653    11112 45799999999999999999999998653 56799999998 


Q ss_pred             CCCCCCCCC
Q 036863          156 GNVFGQRPY  164 (164)
Q Consensus       156 gn~~g~~~Y  164 (164)
                      ||+.|++||
T Consensus       192 GN~~g~~~Y  200 (233)
T 3u3l_C          192 QNTRGRPVY  200 (233)
T ss_dssp             CCCTTSCSS
T ss_pred             CCCCCCcee
Confidence            999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=2.9e-35  Score=234.72  Aligned_cols=134  Identities=25%  Similarity=0.453  Sum_probs=116.1

Q ss_pred             CCchHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCC---CcccEEEE
Q 036863           23 HNKPQDYLKAHNEARASVG-----------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVS---KYSETIAW   82 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~---~~geni~~   82 (164)
                      +++++.||+.||.+|+.++                 |.+|+||++||..||.||+    +|.+.|+...   .+|||++.
T Consensus       235 ~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~~~~~~~~GeNl~~  310 (424)
T 3nt8_A          235 DSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGN----KCVYQHSHGEDRPGLGENIYK  310 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCSSCCCTTTSTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHH----hCcccCCCccccCccceeEEe
Confidence            3688999999999999985                 4589999999999999999    9999998542   69999998


Q ss_pred             ecCCCC----CHHHHHHHHHhcCCCCCCCCCc-c------cCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEE
Q 036863           83 SSQGEL----TAAEYVKICMDGKPLYDHNSNT-C------AINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICN  151 (164)
Q Consensus        83 ~~~~~~----~~~~~v~~W~~e~~~~~~~~~~-~------~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~  151 (164)
                      ...+..    .+.++|+.||+|.++|++.... .      .. +..++|||||||+++++||||++.|..+   .++||+
T Consensus       311 ~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~-~~~~gHfTQ~VW~~t~~vGCa~~~c~~~---~~~VC~  386 (424)
T 3nt8_A          311 TSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRP-NMQIGHYTQMAWDTTYKLGCAVVFCNDF---TFGVCQ  386 (424)
T ss_dssp             ESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCT-TCCCHHHHHHHCTTCCEEEEEEEECSSS---EEEEEE
T ss_pred             cccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCC-CCcccchHHHhhhhcceeeeEEEEeCCC---eEEEEE
Confidence            865443    4789999999999999986533 1      12 4579999999999999999999999876   699999


Q ss_pred             ecCCCCCCCCCCC
Q 036863          152 YDPPGNVFGQRPY  164 (164)
Q Consensus       152 Y~p~gn~~g~~~Y  164 (164)
                      |+|+||+.|++||
T Consensus       387 Y~p~GN~~g~~~Y  399 (424)
T 3nt8_A          387 YGPGGNYMGHVIY  399 (424)
T ss_dssp             EESCCCCTTSBSS
T ss_pred             ecCCCCcCCCCCC
Confidence            9999999999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.97  E-value=9.9e-32  Score=194.12  Aligned_cols=117  Identities=14%  Similarity=0.157  Sum_probs=94.0

Q ss_pred             CCCchHHHHHHHHHHHhhCC------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCC--C
Q 036863           22 AHNKPQDYLKAHNEARASVG------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQG--E   87 (164)
Q Consensus        22 ~~~~~~~il~~hN~~R~~~~------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~--~   87 (164)
                      +++.|+.||+.||.+|+.++            |.+|+||++||..||.||+     |. .++..  .|||++..++.  .
T Consensus        15 t~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-----C~-~~~~~--~GeNl~~~sg~~~~   86 (206)
T 3s6s_A           15 DRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-----LP-GYADL--HHRGVTRFSGDYEG   86 (206)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-----ST-THHHH--TTCEEEEEEEECSS
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-----CC-CCCCC--CCcEEEEecCCCCc
Confidence            44678999999999999874            7789999999999999998     66 33322  29999654422  2


Q ss_pred             CCH--HHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCC---CCeeEEEEEEecCCCCCCCCC
Q 036863           88 LTA--AEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNK---NGTHNFVICNYDPPGNVFGQR  162 (164)
Q Consensus        88 ~~~--~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~---~~~~~~~vC~Y~p~gn~~g~~  162 (164)
                      ...  .++|+.||+|                .++|||||||+++++||||++.|.+   ++...++||+|+|+|  .|++
T Consensus        87 ~~~~~~~av~~W~~E----------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~  148 (206)
T 3s6s_A           87 SAISALKEILETFSA----------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGE  148 (206)
T ss_dssp             CHHHHHHHHHHHHTT----------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTC
T ss_pred             cchhHHHHHHHHHhh----------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCC
Confidence            223  3899999999                2789999999999999999999962   223589999999988  8999


Q ss_pred             CC
Q 036863          163 PY  164 (164)
Q Consensus       163 ~Y  164 (164)
                      ||
T Consensus       149 ~Y  150 (206)
T 3s6s_A          149 SF  150 (206)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.66  E-value=1.7e-16  Score=122.41  Aligned_cols=94  Identities=16%  Similarity=0.152  Sum_probs=83.5

Q ss_pred             chHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCC----------------CCcccEEEEecCCCC
Q 036863           25 KPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV----------------SKYSETIAWSSQGEL   88 (164)
Q Consensus        25 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~----------------~~~geni~~~~~~~~   88 (164)
                      ..+++|+.||.+|..+++++|.||..|+..|+.||+.|+.+|.+.|.++                ..+||||+.+.   .
T Consensus       220 ~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~---~  296 (339)
T 4ifa_A          220 NMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH---S  296 (339)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESC---S
T ss_pred             HHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeC---C
Confidence            4678999999999999999999999999999999999999999999642                13799999876   4


Q ss_pred             CHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEE
Q 036863           89 TAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKER  138 (164)
Q Consensus        89 ~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~  138 (164)
                      ++..+|+.|++                 +.+|+.+|+|.+.++||+|+..
T Consensus       297 s~~~av~~Wmn-----------------SpGHr~NIL~~~~t~iGvGv~~  329 (339)
T 4ifa_A          297 DGVAALQGWLN-----------------SEGHRKNLLNEQFTGLGVGVYD  329 (339)
T ss_dssp             SHHHHHHHHHT-----------------SHHHHHHHTCTTCCEEEEEEET
T ss_pred             CHHHHHHHHhC-----------------CHhHHHHHhCCCCCEEEEEEEe
Confidence            68899999953                 5689999999999999999973

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.43  E-value=4.2e-13  Score=103.16  Aligned_cols=93  Identities=12%  Similarity=0.141  Sum_probs=75.5

Q ss_pred             hHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCC---------------CCcccEEEEecCCCCCH
Q 036863           26 PQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV---------------SKYSETIAWSSQGELTA   90 (164)
Q Consensus        26 ~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~---------------~~~geni~~~~~~~~~~   90 (164)
                      .++||+++|.+|..++++||.||+.|+..|+.||..|++.....|++.               ..+||||+.+.   .++
T Consensus       206 e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~---~~~  282 (323)
T 4h0a_A          206 LISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAF---NDV  282 (323)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESC---CSH
T ss_pred             HHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCC---CCH
Confidence            467999999999999999999999999999999999986654444321               24699999876   468


Q ss_pred             HHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEE
Q 036863           91 AEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKER  138 (164)
Q Consensus        91 ~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~  138 (164)
                      ..+|+.|++                 +.+|..+|+..+.++||+|+..
T Consensus       283 ~~vv~~Wmn-----------------SpgHR~NiL~~~~t~iGvGv~~  313 (323)
T 4h0a_A          283 PTLIHSWMN-----------------SDIHRSRLLNSKYDEMGGDVMR  313 (323)
T ss_dssp             HHHHHHHHT-----------------SHHHHHHHTCSSCCEEEEEEET
T ss_pred             HHHHHHHHc-----------------CHHHHHHHcCCCCCEEEEEEEc
Confidence            999999952                 5689999999999999999863

>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}

Probab=82.35  E-value=1.3  Score=19.39  Aligned_cols=17  Identities=35%  Similarity=0.567  Sum_probs=14.4

Q ss_pred             HHHHHHHHhhCCCCCcc
Q 036863           30 LKAHNEARASVGVGPMS   46 (164)
Q Consensus        30 l~~hN~~R~~~~m~~L~   46 (164)
                      ++..|+.|...+|+++.
T Consensus         4 iEEtnk~r~~lGLkplp   20 (21)
T 3plv_C            4 IEETNELRASLGLKLIP   20 (26)
T ss_dssp             HHHHHHHHHHTTCCCCC
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            56789999999998873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	1e-31
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	3e-25
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	9e-24
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	9e-23

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score =  108 bits (270), Expect = 1e-31
 Identities = 66/141 (46%), Positives = 82/141 (58%), Gaps = 7/141 (4%)

Query: 24  NKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWS 83
           N PQDYL  HN+ARA VGVGPMSWD  LA  +  +A    G+CN   +   +        
Sbjct: 2   NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGEN----LAK 57

Query: 84  SQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG 143
             G+ T    V++ +  +P Y++ +N C   G KC  YTQVVWRNSVRLGC + RCN   
Sbjct: 58  GGGDFTGRAAVQLWVSERPSYNYATNQCV-GGKKCRHYTQVVWRNSVRLGCGRARCNNGW 116

Query: 144 THNFVICNYDPPGNVFGQRPY 164
              F+ CNYDP GN  GQRPY
Sbjct: 117 W--FISCNYDPVGNWIGQRPY 135

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 93.0 bits (230), Expect = 3e-25
 Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 12/148 (8%)

Query: 27  QDYLKAHNEARASVGVGP-----MSWDYKLADYSHKHAQKLK---GNCNSKKTQVSKYSE 78
            + +  HN  R SV         M W  + AD + + A +      +  S+  +  K  E
Sbjct: 16  NEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIKCGE 75

Query: 79  TIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKER 138
            I  S    +   + +    D    + +              YTQ+VW  S R+GCA   
Sbjct: 76  NIYMSP-YPMKWTDIIHAWHDEYKDFKYGVGADP-PNAVTGHYTQIVWYKSYRIGCAAAY 133

Query: 139 CNKNGTHNFVICNYDPPGNVFGQ--RPY 164
           C  +    F +C Y P GN  G+   PY
Sbjct: 134 CPSSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.8 bits (219), Expect = 9e-24
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 7/147 (4%)

Query: 20  SSAHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSET 79
           S++     + LKAHNE R   GV P+     L   + ++++ L      K +  S   + 
Sbjct: 1   SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQC 60

Query: 80  IA--WSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKE 137
                 +  + T  E           Y+          +    +T +VW+N+ ++G  K 
Sbjct: 61  GENLAWASYDQTGKEVADRWYSEIKNYNFQQPGF---TSGTGHFTAMVWKNTKKMGVGKA 117

Query: 138 RCNKNGTHNFVICNYDPPGNVFGQRPY 164
             +   +  FV+  Y P GNV  +  +
Sbjct: 118 SASDGSS--FVVARYFPAGNVVNEGFF 142

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 87.7 bits (216), Expect = 9e-23
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 27  QDYLKAHNEARASVGVG-----------------PMSWDYKLADYSHKHAQKLKGNCNS- 68
           QD LK HN+ R  +  G                  + W+ +LA  +   A + +   ++ 
Sbjct: 47  QDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTC 106

Query: 69  ---KKTQVSKYSETIAWSSQGELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVV 125
               K QV +       ++       + VK+  D    Y+        +  K   YTQ+V
Sbjct: 107 RDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMV 166

Query: 126 WRNSVRLGCAKERCNKNGTHN-FVICNYDPPGNVFGQRPY 164
           W N+  +GC   +  +   H  +++CNY P GN   +  Y
Sbjct: 167 WANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=7.7e-45  Score=247.00  Aligned_cols=135  Identities=50%  Similarity=0.928  Sum_probs=122.4

Q ss_pred             CCchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCCCCcccEEEEecCCCCCHHHHHHHHHhcCC
Q 036863           23 HNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQVSKYSETIAWSSQGELTAAEYVKICMDGKP  102 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~~~~geni~~~~~~~~~~~~~v~~W~~e~~  102 (164)
                      ++.++++|+.||.+|+.++|+||+||++|+..||.||++++..|...|+   .+||||+.+. ...++.++|+.||+|.+
T Consensus         1 ~~~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~~~~~---~~GeNi~~~~-~~~~~~~av~~W~~E~~   76 (135)
T d1cfea_           1 QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS---GAGENLAKGG-GDFTGRAAVQLWVSERP   76 (135)
T ss_dssp             CCSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSC---SSSBCCEECS-SSCCHHHHHHHHHTTGG
T ss_pred             CCcHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCCcccC---ccccceeccC-CCCCHHHHHHHHHhhcc
Confidence            3578899999999999999999999999999999999988877876665   5799998765 46789999999999999


Q ss_pred             CCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCCCCC
Q 036863          103 LYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY  164 (164)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      +|++..+.+.. ...++|||||||+++++||||++.|+++.  .++||+|+|+||+.|++||
T Consensus        77 ~y~~~~~~~~~-~~~~ghftQmvW~~t~~vGCa~~~c~~~~--~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          77 SYNYATNQCVG-GKKCRHYTQVVWRNSVRLGCGRARCNNGW--WFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GEEGGGTEECS-SSCCSSHHHHHCTTCCEEEEEEEECTTSS--EEEEEECSSCCSCTTSCCC
T ss_pred             ccccccccCCC-CcccchhheeeehhheEeeEEEEEECCCC--EEEEEEEeCCCCcCCcCCC
Confidence            99998887766 66799999999999999999999998876  7899999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-42  Score=237.25  Aligned_cols=137  Identities=24%  Similarity=0.396  Sum_probs=123.3

Q ss_pred             CCCchHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhcCCCCCccCCC---CCcccEEEEecCCCCCHHHHHHHHH
Q 036863           22 AHNKPQDYLKAHNEARASVGVGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV---SKYSETIAWSSQGELTAAEYVKICM   98 (164)
Q Consensus        22 ~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~---~~~geni~~~~~~~~~~~~~v~~W~   98 (164)
                      +++++++||+.||.+|+.+++++|+||++|+..||.||++|+++|.+.|++.   ..+|||++.+. ....+.++|+.|+
T Consensus         3 ~~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~-~~~~~~~~v~~W~   81 (149)
T d1smba_           3 SKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWY   81 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEES-SCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecC-CCccHHHHHHHHH
Confidence            3467999999999999999999999999999999999999999999998643   36899999876 3456889999999


Q ss_pred             hcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCCCCC
Q 036863           99 DGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQRPY  164 (164)
Q Consensus        99 ~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~~~Y  164 (164)
                      +|.++|++..+.+..   .++|||||||.++++||||++.|+++.  .++||+|+|+||+.|+.||
T Consensus        82 ~e~~~y~~~~~~~~~---~~ghftqmvw~~t~~vGCg~a~c~~~~--~~~VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          82 SEIKNYNFQQPGFTS---GTGHFTAMVWKNTKKMGVGKASASDGS--SFVVARYFPAGNVVNEGFF  142 (149)
T ss_dssp             GGGGGCCTTSCCCCG---GGHHHHHHHCTTCCEEEEEEEECTTSC--EEEEEEEESCCCCCSTTHH
T ss_pred             HHHhhcccCCCCccc---ccchhhheecCCceEeeEEEEEcCCCC--EEEEEEeeCCCCcCCcccc
Confidence            999999999887754   699999999999999999999998865  7899999999999999876

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=1.2e-39  Score=227.99  Aligned_cols=137  Identities=26%  Similarity=0.450  Sum_probs=118.7

Q ss_pred             CCCchHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhcCCCCCccCCC-------CCcccEEEEecCCCCC
Q 036863           22 AHNKPQDYLKAHNEARASVG-----VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQV-------SKYSETIAWSSQGELT   89 (164)
Q Consensus        22 ~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~~-------~~~geni~~~~~~~~~   89 (164)
                      .++.+++||+.||.+|+.++     |++|.||++|+..|+.||+    +|...|+..       ..+|+|++... ....
T Consensus        11 ~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~----~c~~~~~~~~~~~~~~~~~g~n~~~~~-~~~~   85 (164)
T d1rc9a1          11 KPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAY----RCIESHSSYESRVIEGIKCGENIYMSP-YPMK   85 (164)
T ss_dssp             SHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGGEETTEECEEEEEEES-SCCC
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHH----HHhhccCCcccccccccccceEEEEec-CCCC
Confidence            34788999999999999987     7779999999999999999    887776432       26889998765 3457


Q ss_pred             HHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCCeeEEEEEEecCCCCCCCC--CCC
Q 036863           90 AAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNGTHNFVICNYDPPGNVFGQ--RPY  164 (164)
Q Consensus        90 ~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~~~~~~vC~Y~p~gn~~g~--~~Y  164 (164)
                      +.++|+.||+|.++|++..+.+.. ...++|||||||+++++||||++.|.++....++||+|+|+||+.|+  .||
T Consensus        86 ~~~~v~~W~~E~~~~~~~~~~~~~-~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          86 WTDIIHAWHDEYKDFKYGVGADPP-NAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             HHHHHHHHHGGGGGEETTTEESST-TCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSS
T ss_pred             HHHHHHHHhhhhheeecCCCCCCC-cchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCc
Confidence            899999999999999998877666 66799999999999999999999998876567999999999999997  567

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=2.1e-38  Score=229.50  Aligned_cols=138  Identities=24%  Similarity=0.448  Sum_probs=117.3

Q ss_pred             CCchHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhcCCCCCccCC-----CCCcccEE
Q 036863           23 HNKPQDYLKAHNEARASVG-----------------VGPMSWDYKLADYSHKHAQKLKGNCNSKKTQ-----VSKYSETI   80 (164)
Q Consensus        23 ~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~C~~~~~~-----~~~~geni   80 (164)
                      ++.|++||+.||.+|+.++                 |.+|+||++||..||.||+    +|...|+.     ...+|||+
T Consensus        43 ~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~----~C~~~~~~~~~~~~~~~Gen~  118 (209)
T d1qnxa_          43 KQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVGQNV  118 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHh----hcccCCCcccCCCCCCCccee
Confidence            3688999999999999863                 7889999999999999999    88877653     23689999


Q ss_pred             EEecCC---CCCHHHHHHHHHhcCCCCCCCCCcccCCCcccchhhhHHhhccCeeeEEEEEcCCCC-eeEEEEEEecCCC
Q 036863           81 AWSSQG---ELTAAEYVKICMDGKPLYDHNSNTCAINGTKCAVYTQVVWRNSVRLGCAKERCNKNG-THNFVICNYDPPG  156 (164)
Q Consensus        81 ~~~~~~---~~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~~f~q~iw~~~~~vGCa~~~c~~~~-~~~~~vC~Y~p~g  156 (164)
                      +.....   ...+.++|+.|++|..+|++........+..++|||||||+++++||||++.|..++ ...++||+|+|+|
T Consensus       119 ~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~p~G  198 (209)
T d1qnxa_         119 ALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSG  198 (209)
T ss_dssp             EEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred             eecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEECCCC
Confidence            875432   347889999999999999988766554344689999999999999999999997754 5678999999999


Q ss_pred             CCCCCCCC
Q 036863          157 NVFGQRPY  164 (164)
Q Consensus       157 n~~g~~~Y  164 (164)
                      |+.|++||
T Consensus       199 N~~g~~~Y  206 (209)
T d1qnxa_         199 NFKNEELY  206 (209)
T ss_dssp             CCTTSCSS
T ss_pred             CCCCCCCC
Confidence            99999999