Citrus Sinensis ID: 036989

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
KTNNNNARSSRRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMHL
cccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccccc
ccccccccccccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEcccHHHccccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEcccccccEEcccEEcc
ktnnnnarssrrqLSVDYYAKSCPQLEQLVGsvtsqqfkeapvsgpatiRLFFHDcfvegcdgsiliatkpgskelaekdalgnkdlrVEGFESIRKAKALVeskcpgvvsCADILAIAARDYvhlaggpyyqvkkgrwdgkismasrvpfnlpranstIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLydyrgtkqpdpaidPRLLRALRMacphfggntdivapfdvttpflfdhAYYANLEGKLgllasdqvlfldprTKSLVQELGKDKQKFFQAFAVAMEKMGSIGvkrgrkhgekrkdcsmhl
ktnnnnarssrrqlSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIatkpgskelaekdalgnkdlRVEGFESIRKAkalveskcpgvVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPfnlpranstiDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMgsigvkrgrkhgekrkdcsmhl
KTNNNNARSSRRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMHL
***************VDYYAKSCPQLEQLVGSVT***FKEAPVSGPATIRLFFHDCFVEGCDGSILIATK***************DLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEK***********************
***************VDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPG**********GNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACP***G*TDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMHL
************QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVK****************
************QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMHL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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KTNNNNARSSRRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMHL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query318 2.2.26 [Sep-21-2011]
O22959346 Peroxidase 19 OS=Arabidop yes no 0.996 0.916 0.678 1e-131
Q96509330 Peroxidase 55 OS=Arabidop no no 0.943 0.909 0.467 2e-76
O23609326 Peroxidase 41 OS=Arabidop no no 0.924 0.901 0.440 5e-70
Q9FJR1334 Peroxidase 65 OS=Arabidop no no 0.921 0.877 0.473 2e-69
Q96518323 Peroxidase 16 OS=Arabidop no no 0.927 0.913 0.445 2e-69
Q43873329 Peroxidase 73 OS=Arabidop no no 0.949 0.917 0.438 5e-69
O48677326 Peroxidase 6 OS=Arabidops no no 0.943 0.920 0.447 9e-68
Q9SZE7329 Peroxidase 51 OS=Arabidop no no 0.940 0.908 0.440 9e-68
Q96522325 Peroxidase 45 OS=Arabidop no no 0.927 0.907 0.432 1e-66
Q43731329 Peroxidase 50 OS=Arabidop no no 0.930 0.899 0.428 1e-66
>sp|O22959|PER19_ARATH Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1 Back     alignment and function desciption
 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/317 (67%), Positives = 263/317 (82%)

Query: 2   TNNNNARSSRRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGC 61
           T+   A    R+LS DYY+K CPQLE LVGSVTSQ+FKE P+S PATIRLFFHDCFVEGC
Sbjct: 30  TSKPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGC 89

Query: 62  DGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAAR 121
           DGSILI TK GSK+LAE++A  NK+LR EGF+SI KAKALVES CP +VSC+DILAIAAR
Sbjct: 90  DGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAAR 149

Query: 122 DYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLS 181
           D++HLAGGPYYQVKKGRWDGK S A  VP N+PR+NST+DQ+IK+F +KGLT+E++VVLS
Sbjct: 150 DFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLS 209

Query: 182 GAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTP 241
           G+HTIGFAHC++F+ RLYDY+GTK+PDP++D RLL+ LRM+CP  GG++ +V P D TTP
Sbjct: 210 GSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTP 269

Query: 242 FLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGV 301
           F+FD+ Y+  L   +GLL SDQ LFLDPRTK +  E+ +DKQKF +AF  AM+KMGSIGV
Sbjct: 270 FVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDKQKFLKAFGDAMDKMGSIGV 329

Query: 302 KRGRKHGEKRKDCSMHL 318
           KRG++HGE R DC + L
Sbjct: 330 KRGKRHGEIRTDCRVFL 346
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q96509|PER55_ARATH Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1 Back     alignment and function description
>sp|O23609|PER41_ARATH Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=3 SV=1 Back     alignment and function description
>sp|Q9FJR1|PER65_ARATH Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2 Back     alignment and function description
>sp|Q96518|PER16_ARATH Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2 Back     alignment and function description
>sp|Q43873|PER73_ARATH Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1 Back     alignment and function description
>sp|O48677|PER6_ARATH Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZE7|PER51_ARATH Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1 Back     alignment and function description
>sp|Q96522|PER45_ARATH Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1 Back     alignment and function description
>sp|Q43731|PER50_ARATH Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
255563038365 Peroxidase 19 precursor, putative [Ricin 0.990 0.863 0.828 1e-159
224077022345 predicted protein [Populus trichocarpa] 0.977 0.901 0.840 1e-158
225443537349 PREDICTED: peroxidase 19-like [Vitis vin 0.996 0.908 0.807 1e-154
297740460357 unnamed protein product [Vitis vinifera] 0.996 0.887 0.807 1e-154
449462103347 PREDICTED: peroxidase 19-like [Cucumis s 0.962 0.881 0.800 1e-147
224116386293 predicted protein [Populus trichocarpa] 0.921 1.0 0.839 1e-147
356546189349 PREDICTED: peroxidase 19-like [Glycine m 0.984 0.896 0.757 1e-143
15226205346 peroxidase 19 [Arabidopsis thaliana] gi| 0.996 0.916 0.678 1e-129
19347720338 putative peroxidase [Arabidopsis thalian 0.996 0.937 0.678 1e-129
218188809374 hypothetical protein OsI_03192 [Oryza sa 0.965 0.820 0.598 1e-112
>gi|255563038|ref|XP_002522523.1| Peroxidase 19 precursor, putative [Ricinus communis] gi|223538214|gb|EEF39823.1| Peroxidase 19 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 261/315 (82%), Positives = 292/315 (92%)

Query: 3   NNNNARSSRRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCD 62
             N  R   RQLSV+YYA++CPQLEQLVGSVTSQQFKE PVSGPATIRLFFHDCFVEGCD
Sbjct: 49  TTNTTRRPPRQLSVNYYARTCPQLEQLVGSVTSQQFKETPVSGPATIRLFFHDCFVEGCD 108

Query: 63  GSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARD 122
            SILI+T+PGSK+LAEKDA  NK+LR+EGFESIRKAKALVE KCPGVVSC+DILAIAARD
Sbjct: 109 ASILISTRPGSKQLAEKDAEDNKNLRIEGFESIRKAKALVEGKCPGVVSCSDILAIAARD 168

Query: 123 YVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSG 182
           +VHLAGGPYYQVKKGRWDGKIS+ASRV FNLP ANST+DQ++K+FN+KGLT++D+VVLSG
Sbjct: 169 FVHLAGGPYYQVKKGRWDGKISLASRVTFNLPSANSTVDQLLKLFNSKGLTLQDLVVLSG 228

Query: 183 AHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPF 242
           AHTIGFAHC+ FVSRLY+Y G+KQPDPAIDPRLL+AL+M+CP FGGN DIVAPFDVTTPF
Sbjct: 229 AHTIGFAHCKQFVSRLYNYHGSKQPDPAIDPRLLKALKMSCPQFGGNEDIVAPFDVTTPF 288

Query: 243 LFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVK 302
           LFDHAYY NLE KLGLLA+DQ LFLDPRTK LVQ+LGKDKQKF+QAFA AM+KMGSIGVK
Sbjct: 289 LFDHAYYGNLESKLGLLATDQALFLDPRTKPLVQQLGKDKQKFYQAFAQAMDKMGSIGVK 348

Query: 303 RGRKHGEKRKDCSMH 317
           RGR+HGEKRKDCS+H
Sbjct: 349 RGRRHGEKRKDCSIH 363

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224077022|ref|XP_002305096.1| predicted protein [Populus trichocarpa] gi|222848060|gb|EEE85607.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225443537|ref|XP_002272881.1| PREDICTED: peroxidase 19-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740460|emb|CBI30642.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449462103|ref|XP_004148781.1| PREDICTED: peroxidase 19-like [Cucumis sativus] gi|449515631|ref|XP_004164852.1| PREDICTED: peroxidase 19-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224116386|ref|XP_002331969.1| predicted protein [Populus trichocarpa] gi|222874746|gb|EEF11877.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356546189|ref|XP_003541513.1| PREDICTED: peroxidase 19-like [Glycine max] Back     alignment and taxonomy information
>gi|15226205|ref|NP_180953.1| peroxidase 19 [Arabidopsis thaliana] gi|25453189|sp|O22959.1|PER19_ARATH RecName: Full=Peroxidase 19; Short=Atperox P19; AltName: Full=ATP51; Flags: Precursor gi|2342726|gb|AAB67624.1| putative peroxidase [Arabidopsis thaliana] gi|26983844|gb|AAN86174.1| putative peroxidase [Arabidopsis thaliana] gi|330253818|gb|AEC08912.1| peroxidase 19 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|19347720|gb|AAL86286.1| putative peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|218188809|gb|EEC71236.1| hypothetical protein OsI_03192 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
TAIR|locus:2055501346 AT2G34060 [Arabidopsis thalian 0.996 0.916 0.678 8.5e-120
TAIR|locus:2174693330 AT5G14130 [Arabidopsis thalian 0.943 0.909 0.467 2.6e-70
TAIR|locus:2129386326 AT4G17690 [Arabidopsis thalian 0.921 0.898 0.441 3.2e-65
TAIR|locus:2170997334 AT5G47000 [Arabidopsis thalian 0.921 0.877 0.473 4.1e-65
TAIR|locus:2044485323 AT2G18980 [Arabidopsis thalian 0.927 0.913 0.449 6e-64
TAIR|locus:2158227329 RHS19 "root hair specific 19" 0.937 0.905 0.444 1.6e-63
TAIR|locus:2032392326 AT1G24110 [Arabidopsis thalian 0.940 0.917 0.449 4.2e-63
TAIR|locus:2120061329 AT4G37530 [Arabidopsis thalian 0.940 0.908 0.440 7.9e-62
TAIR|locus:2083088329 AT3G49960 [Arabidopsis thalian 0.930 0.899 0.431 1.3e-61
TAIR|locus:2120051329 AT4G37520 [Arabidopsis thalian 0.940 0.908 0.427 2.1e-61
TAIR|locus:2055501 AT2G34060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
 Identities = 215/317 (67%), Positives = 263/317 (82%)

Query:     2 TNNNNARSSRRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGC 61
             T+   A    R+LS DYY+K CPQLE LVGSVTSQ+FKE P+S PATIRLFFHDCFVEGC
Sbjct:    30 TSKPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGC 89

Query:    62 DGSILIATKPGSKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAAR 121
             DGSILI TK GSK+LAE++A  NK+LR EGF+SI KAKALVES CP +VSC+DILAIAAR
Sbjct:    90 DGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAAR 149

Query:   122 DYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLS 181
             D++HLAGGPYYQVKKGRWDGK S A  VP N+PR+NST+DQ+IK+F +KGLT+E++VVLS
Sbjct:   150 DFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLS 209

Query:   182 GAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTP 241
             G+HTIGFAHC++F+ RLYDY+GTK+PDP++D RLL+ LRM+CP  GG++ +V P D TTP
Sbjct:   210 GSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTP 269

Query:   242 FLFDHAYYANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGV 301
             F+FD+ Y+  L   +GLL SDQ LFLDPRTK +  E+ +DKQKF +AF  AM+KMGSIGV
Sbjct:   270 FVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMARDKQKFLKAFGDAMDKMGSIGV 329

Query:   302 KRGRKHGEKRKDCSMHL 318
             KRG++HGE R DC + L
Sbjct:   330 KRGKRHGEIRTDCRVFL 346
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2174693 AT5G14130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129386 AT4G17690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170997 AT5G47000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044485 AT2G18980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158227 RHS19 "root hair specific 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032392 AT1G24110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120061 AT4G37530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083088 AT3G49960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120051 AT4G37520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O22959PER19_ARATH1, ., 1, 1, ., 1, ., 70.67820.99680.9161yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-159
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 5e-75
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-62
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 6e-23
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 5e-17
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 5e-10
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 6e-09
cd00692328 cd00692, ligninase, Ligninase and other manganese- 3e-08
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 2e-07
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 2e-05
pfam00141180 pfam00141, peroxidase, Peroxidase 4e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  445 bits (1147), Expect = e-159
 Identities = 154/303 (50%), Positives = 194/303 (64%), Gaps = 7/303 (2%)

Query: 13  QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPG 72
           QLSV +Y+KSCP  E +V SV     K  P    A +RL FHDCFV GCD S+L+ +   
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 73  SKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYY 132
           +   +EKDA  N  LR  GF+ I   KA +E+ CPGVVSCADILA+AARD V LAGGP Y
Sbjct: 61  NT--SEKDAPPNLSLR--GFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSY 116

Query: 133 QVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCE 192
           +V  GR DG++S A+ V  NLP    ++ Q+I +F +KGLT+ D+V LSGAHTIG AHC 
Sbjct: 117 EVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCS 175

Query: 193 HFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANL 252
            F  RLY++ GT  PDP +DP     LR  CP  GG+ D + P D  TP  FD++YY NL
Sbjct: 176 SFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCP-AGGDDDTLVPLDPGTPNTFDNSYYKNL 234

Query: 253 EGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRK 312
               GLL SDQ L  DPRT+++V     ++  FF+ FA AM KMG+IGV  G + GE RK
Sbjct: 235 LAGRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQ-GEIRK 293

Query: 313 DCS 315
           +C 
Sbjct: 294 NCR 296

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 318
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 100.0
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.5
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.6e-102  Score=733.32  Aligned_cols=297  Identities=42%  Similarity=0.718  Sum_probs=281.5

Q ss_pred             cCCCCccccccCCccHHHHHHHHHHHHHHhCCCCccchhhhhcccccccCCCceEeccCCCCCCchhhhcccCCCCCccc
Q 036989           11 RRQLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVE   90 (318)
Q Consensus        11 ~~~l~~~~y~~~Cp~~e~~Vr~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDgSill~~~~~~~~~~E~~~~~N~~L~~~   90 (318)
                      .++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++.     .|+++++|.+|  +
T Consensus        22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~-----~Ek~a~~N~~l--~   94 (324)
T PLN03030         22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN-----TEKTALPNLLL--R   94 (324)
T ss_pred             hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc-----ccccCCCCcCc--c
Confidence            3679999999999999999999999999999999999999999999999999999999642     79999999999  8


Q ss_pred             cHHHHHHHHHHHHhcCCCccCHHHHHHHhhHHHHHhcCCCccccccCccCCCCcccCCCCCCCCCCCCCHHHHHHHHHHC
Q 036989           91 GFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAK  170 (318)
Q Consensus        91 ~~~~i~~iK~~le~~cp~~VScADilalAa~~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~  170 (318)
                      ||++|+.||+.||++||++|||||||||||||||+++|||.|+|++||+|+.+|...++. +||.|+.++++|++.|+++
T Consensus        95 Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~  173 (324)
T PLN03030         95 GYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAK  173 (324)
T ss_pred             hHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999999999998777664 8999999999999999999


Q ss_pred             CCCccccccccccceeccccccccccccccCCCCC-CCCCCCCHHHHHHHHhhCCCCCCCCCcccCCCCCCCcccchhHH
Q 036989          171 GLTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTK-QPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYY  249 (318)
Q Consensus       171 Gl~~~e~VaLsGaHtiG~~hc~~f~~Rl~~f~g~~-~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~~D~~tp~~fDn~Yy  249 (318)
                      ||+.+|||+||||||||++||.+|.+|||||.|++ .+||+||+.|++.|+..|| ..++....+++|+.||.+|||+||
T Consensus       174 Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp-~~~~~~~~~~lD~~Tp~~FDn~Yy  252 (324)
T PLN03030        174 GLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCP-QNGDGSRRIALDTGSSNRFDASFF  252 (324)
T ss_pred             CCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCC-CCCCCCccccCCCCCCcccccHHH
Confidence            99999999999999999999999999999999875 5899999999999999999 333333467899999999999999


Q ss_pred             HHhhccccccchhhhhcCChhhHHHHHHHhhhH----HHHHHHHHHHHHHHHcCCccCCCCCccccccCCCC
Q 036989          250 ANLEGKLGLLASDQVLFLDPRTKSLVQELGKDK----QKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMH  317 (318)
Q Consensus       250 ~~l~~~~glL~sD~~L~~d~~t~~~v~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~~GeiR~~C~~~  317 (318)
                      ++|+.++|+|+|||+|+.|++|+++|++||.|+    ++|+++|++||+||++|+|+||++ ||||++|+.|
T Consensus       253 ~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~-GEIRk~C~~v  323 (324)
T PLN03030        253 SNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTN-GEIRKVCSAI  323 (324)
T ss_pred             HHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCC-Cceecccccc
Confidence            999999999999999999999999999999875    599999999999999999999999 9999999986

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-60
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 3e-60
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 3e-58
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 4e-58
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 4e-58
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 5e-58
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 5e-58
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 5e-58
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 7e-58
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 7e-58
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 1e-57
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-57
1sch_A294 Peanut Peroxidase Length = 294 3e-57
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 3e-57
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 4e-57
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-56
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-53
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 7e-53
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 3e-51
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 6e-13
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 7e-13
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 7e-13
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 1e-10
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 1e-10
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 1e-10
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-10
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 1e-10
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-10
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-10
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 1e-10
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 1e-10
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-10
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-10
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 1e-09
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 6e-09
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 2e-07
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 6e-07
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 2e-06
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 5e-06
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 1e-05
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 7e-05
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 7e-05
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 9e-05
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 1e-04
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 1e-04
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 1e-04
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 1e-04
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 1e-04
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 1e-04
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 1e-04
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 1e-04
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 1e-04
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 1e-04
3m23_A291 Crystallographic And Single Crystal Spectral Analys 1e-04
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 3e-04
1bem_A291 Interaction Between Proximal And Distals Regions Of 3e-04
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 4e-04
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 5e-04
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 5e-04
1bej_A291 Interaction Between Proximal And Distals Regions Of 5e-04
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 5e-04
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 5e-04
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 5e-04
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 5e-04
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 5e-04
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 6e-04
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 7e-04
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 8e-04
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 8e-04
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 8e-04
1beq_A291 Interaction Between Proximal And Distals Regions Of 8e-04
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 8e-04
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 8e-04
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 8e-04
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 8e-04
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 8e-04
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 9e-04
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 9e-04
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 9e-04
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure 
Iteration: 1

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/307 (44%), Positives = 178/307 (57%), Gaps = 17/307 (5%)
Query: 13  QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPG 72
           QLS D YAKSCP L Q+V    +   K       + IRL FHDCFV GCD S+L+    G
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLL---DG 57
Query: 73  SKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYY 132
           +   +EK A+ N +    GFE I   KA VE+ CPGVVSCADIL +AARD V L+GGP +
Sbjct: 58  AD--SEKLAIPNIN-SARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGW 114
Query: 133 QVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCE 192
           +V  GR DG ++  +    NLP     +D II  F A  L I D+V LSGAHT G A C 
Sbjct: 115 RVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCA 173
Query: 193 HFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYAN- 251
            F +RL+++ G   PD  ++  LL  L+  CP  GGN++I AP D +T   FD+ Y+ N 
Sbjct: 174 VFSNRLFNFTGAGNPDATLETSLLSNLQTVCP-LGGNSNITAPLDRSTTDTFDNNYFKNL 232
Query: 252 LEGKLGLLASDQVLFLDP----RTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKH 307
           LEGK GLL+SDQ+LF        TK LV+   + +  FF+ F  AM +MG+I        
Sbjct: 233 LEGK-GLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS---NGAS 288
Query: 308 GEKRKDC 314
           GE R +C
Sbjct: 289 GEVRTNC 295
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-158
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-156
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-156
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-155
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-154
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-152
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-150
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 2e-73
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 1e-69
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-69
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 7e-67
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 4e-63
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 1e-60
2e39_A344 Peroxidase; heme protein, coordination geometry of 1e-60
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-24
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  442 bits (1139), Expect = e-158
 Identities = 128/304 (42%), Positives = 163/304 (53%), Gaps = 7/304 (2%)

Query: 14  LSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGS 73
           L + +Y  SCP  E LV    +  F       P  IR+ FHDCFV GCD S+L+ +   +
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 74  KELAEKDALGNKD-LRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYY 132
              AEKDA+ N   LR  GFE I  AK+ VE+ CP  VSCADILA AARD  +LAG   Y
Sbjct: 62  T--AEKDAIPNNPSLR--GFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITY 117

Query: 133 QVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCE 192
           QV  GR DG +S+AS     +P       Q+I  F  K LT ++MV LSGAH+IG AHC 
Sbjct: 118 QVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCS 177

Query: 193 HFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGN-TDIVAPFDVTTPFLFDHAYYAN 251
            F +RLY++      DP + P     LR  CP      T I    D+ TP + D+ YY  
Sbjct: 178 SFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTG 237

Query: 252 LEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKR 311
           ++  LGLL SDQ L  +    + V+    +   +   FA AM KMG I V  G + GE R
Sbjct: 238 VQLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQ-GEIR 296

Query: 312 KDCS 315
            +CS
Sbjct: 297 TNCS 300
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=7.2e-106  Score=756.75  Aligned_cols=299  Identities=42%  Similarity=0.726  Sum_probs=287.5

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHHhCCCCccchhhhhcccccccCCCceEeccCCCCCCchhhhcccCCC-CCcccc
Q 036989           13 QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNK-DLRVEG   91 (318)
Q Consensus        13 ~l~~~~y~~~Cp~~e~~Vr~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDgSill~~~~~~~~~~E~~~~~N~-~L~~~~   91 (318)
                      .|+++||++|||++|+|||+.|++++.++++++|++|||+||||||+||||||||++++++.  +|+++++|. +|  +|
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~--~Ek~~~~N~~~l--rg   76 (304)
T 3hdl_A            1 DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNT--AEKDAIPNNPSL--RG   76 (304)
T ss_dssp             CCEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBC--CGGGSTTTTTTC--CC
T ss_pred             CCccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCc--ccccCCCcccch--HH
Confidence            38899999999999999999999999999999999999999999999999999999887666  899999998 78  99


Q ss_pred             HHHHHHHHHHHHhcCCCccCHHHHHHHhhHHHHHhcCCCccccccCccCCCCcccCCCCCCCCCCCCCHHHHHHHHHHCC
Q 036989           92 FESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKG  171 (318)
Q Consensus        92 ~~~i~~iK~~le~~cp~~VScADilalAa~~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G  171 (318)
                      |++|+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|+.++...+++.+||+|+.++++|++.|++||
T Consensus        77 f~vid~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G  156 (304)
T 3hdl_A           77 FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKT  156 (304)
T ss_dssp             HHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999998876667789999999999999999999


Q ss_pred             CCccccccccccceeccccccccccccccCCCCCCCCCCCCHHHHHHHHhhCCCCCCC--CCcccCCCCCCCcccchhHH
Q 036989          172 LTIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGN--TDIVAPFDVTTPFLFDHAYY  249 (318)
Q Consensus       172 l~~~e~VaLsGaHtiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~--~~~~~~~D~~tp~~fDn~Yy  249 (318)
                      |+++||||||||||||++||.+|.+|||||+|++.+||+|++.|++.|+..|| ..++  ++..+++|+.||.+|||+||
T Consensus       157 l~~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp-~~~~~~~~~~~~lD~~TP~~FDN~Yy  235 (304)
T 3hdl_A          157 LTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCP-ANSTRFTPITVSLDIITPSVLDNMYY  235 (304)
T ss_dssp             CCHHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSC-TTCCTTSCCEEESCSSSTTSCSTHHH
T ss_pred             CCHHHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCC-CCCCCCCccccCCCCCCcccccHHHH
Confidence            99999999999999999999999999999999989999999999999999999 4444  56678999999999999999


Q ss_pred             HHhhccccccchhhhhcCChhhHHHHHHHhhhHHHHHHHHHHHHHHHHcCCccCCCCCccccccCCCC
Q 036989          250 ANLEGKLGLLASDQVLFLDPRTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMH  317 (318)
Q Consensus       250 ~~l~~~~glL~sD~~L~~d~~t~~~v~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~~GeiR~~C~~~  317 (318)
                      ++|+.++|||+|||+|+.|++|+++|++||.|+++|+++|++||+||++|||+||.+ ||||++|++|
T Consensus       236 ~nL~~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~-GeIR~~C~~~  302 (304)
T 3hdl_A          236 TGVQLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQ-GEIRTNCSVV  302 (304)
T ss_dssp             HHHHTTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTS-SBCCSBTTBC
T ss_pred             HHHHhCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCC-CeeeCCcccc
Confidence            999999999999999999999999999999999999999999999999999999999 9999999986
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 318
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-115
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-111
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-109
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-106
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-103
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-102
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-62
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 8e-61
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 7e-57
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-46
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 1e-42
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 5e-40
d1itka2308 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc 2e-06
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 2e-05
d1ub2a2294 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn 9e-05
d1u2ka_292 a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder 1e-04
d1mwva2308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 2e-04
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 2e-04
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 8e-04
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  332 bits (853), Expect = e-115
 Identities = 120/305 (39%), Positives = 162/305 (53%), Gaps = 7/305 (2%)

Query: 13  QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPG 72
           QL+  +Y ++CP L  +V  V        P  G + +RL FHDCFV+GCDGS+L+     
Sbjct: 1   QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60

Query: 73  SKELAEKDALGNKDLRVEGFESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYY 132
            +   E+DAL N +  + G + +   K  VE+ CP  VSCADILAIAA     L GGP +
Sbjct: 61  IES--EQDALPNINS-IRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGW 117

Query: 133 QVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGLTIEDMVVLSGAHTIGFAHCE 192
            V  GR D   +  +    NLP     + Q+   F  +GL   D+V LSG HT G A C 
Sbjct: 118 PVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCS 177

Query: 193 HFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANL 252
            F++RLY++  T  PDP ++   L  LR  C       D +   D++TP  FD+ YY+NL
Sbjct: 178 TFINRLYNFSNTGNPDPTLNTTYLEVLRARC-PQNATGDNLTNLDLSTPDQFDNRYYSNL 236

Query: 253 EGKLGLLASDQVLFLDP--RTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEK 310
               GLL SDQ LF  P   T  +V     ++  FF  F V+M KMG+IGV  G + GE 
Sbjct: 237 LQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDE-GEI 295

Query: 311 RKDCS 315
           R  C+
Sbjct: 296 RLQCN 300
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.1e-100  Score=722.26  Aligned_cols=300  Identities=40%  Similarity=0.689  Sum_probs=287.7

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHHhCCCCccchhhhhcccccccCCCceEeccCCCCCCchhhhcccCCCCCccccH
Q 036989           13 QLSVDYYAKSCPQLEQLVGSVTSQQFKEAPVSGPATIRLFFHDCFVEGCDGSILIATKPGSKELAEKDALGNKDLRVEGF   92 (318)
Q Consensus        13 ~l~~~~y~~~Cp~~e~~Vr~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDgSill~~~~~~~~~~E~~~~~N~~L~~~~~   92 (318)
                      ||+.+||++|||++|+|||+.|++.+.+||+++|++|||+||||||+||||||||+++++..  +|+++++|.++. +||
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~--~E~~~~~N~~~~-~g~   77 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIE--SEQDALPNINSI-RGL   77 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCC--CGGGSTTTTTTC-CCH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCcc--ccccCCcccccc-hhH
Confidence            89999999999999999999999999999999999999999999999999999999887767  899999999753 899


Q ss_pred             HHHHHHHHHHHhcCCCccCHHHHHHHhhHHHHHhcCCCccccccCccCCCCcccCCCCCCCCCCCCCHHHHHHHHHHCCC
Q 036989           93 ESIRKAKALVESKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASRVPFNLPRANSTIDQIIKIFNAKGL  172 (318)
Q Consensus        93 ~~i~~iK~~le~~cp~~VScADilalAa~~AV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  172 (318)
                      ++|+.||+.||..||++|||||||+||||+||+++|||.|+|++||+|+.+++..++..+||.|+.++++|+..|++|||
T Consensus        78 ~~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  157 (304)
T d1fhfa_          78 DVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGL  157 (304)
T ss_dssp             HHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999999999999999998776777899999999999999999999


Q ss_pred             CccccccccccceeccccccccccccccCCCCCCCCCCCCHHHHHHHHhhCCCCCCCCCcccCCCCCCCcccchhHHHHh
Q 036989          173 TIEDMVVLSGAHTIGFAHCEHFVSRLYDYRGTKQPDPAIDPRLLRALRMACPHFGGNTDIVAPFDVTTPFLFDHAYYANL  252 (318)
Q Consensus       173 ~~~e~VaLsGaHtiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~~D~~tp~~fDn~Yy~~l  252 (318)
                      +.+|||||+||||||++||.+|..|+|+|.+++.+||++++.|+..|+..|| .++.....+.+|..||.+|||+||+++
T Consensus       158 ~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~-~~~~~~~~~~~d~~tp~~fDn~Yy~~l  236 (304)
T d1fhfa_         158 NTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCP-QNATGDNLTNLDLSTPDQFDNRYYSNL  236 (304)
T ss_dssp             CHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSC-SSCSSCCEEESCSSSTTSCSTHHHHHH
T ss_pred             CHHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcC-CCCCCCcccccCCCCCCccccHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999 445556677899999999999999999


Q ss_pred             hccccccchhhhhcCCh--hhHHHHHHHhhhHHHHHHHHHHHHHHHHcCCccCCCCCccccccCCCC
Q 036989          253 EGKLGLLASDQVLFLDP--RTKSLVQELGKDKQKFFQAFAVAMEKMGSIGVKRGRKHGEKRKDCSMH  317 (318)
Q Consensus       253 ~~~~glL~sD~~L~~d~--~t~~~v~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~~GeiR~~C~~~  317 (318)
                      +.++|+|+|||+|+.||  +|+++|++||.|+++|+++|++||+||++|||+||.+ ||||++|++|
T Consensus       237 ~~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~-GeiR~~C~~~  302 (304)
T d1fhfa_         237 LQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDE-GEIRLQCNFV  302 (304)
T ss_dssp             HTTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTS-SBCCSBTTBC
T ss_pred             hhcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCC-CcccCcccCc
Confidence            99999999999999996  6999999999999999999999999999999999999 9999999986
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure