Citrus Sinensis ID: 036994
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| 147780451 | 919 | hypothetical protein VITISV_035399 [Viti | 0.899 | 0.126 | 0.677 | 1e-39 | |
| 225458888 | 426 | PREDICTED: lecithin-cholesterol acyltran | 0.852 | 0.258 | 0.704 | 2e-39 | |
| 302142173 | 514 | unnamed protein product [Vitis vinifera] | 0.860 | 0.215 | 0.689 | 1e-38 | |
| 18396359 | 432 | Lecithin-cholesterol acyltransferase-lik | 0.837 | 0.25 | 0.651 | 1e-38 | |
| 225458886 | 431 | PREDICTED: lecithin-cholesterol acyltran | 0.852 | 0.255 | 0.686 | 4e-38 | |
| 255538016 | 429 | 1-O-acylceramide synthase precursor, put | 0.852 | 0.256 | 0.666 | 5e-38 | |
| 118487414 | 426 | unknown [Populus trichocarpa] | 0.844 | 0.255 | 0.695 | 1e-37 | |
| 224129828 | 433 | predicted protein [Populus trichocarpa] | 0.844 | 0.251 | 0.686 | 5e-37 | |
| 297845698 | 432 | lecithin:cholesterol acyltransferase fam | 0.821 | 0.245 | 0.654 | 7e-37 | |
| 356514509 | 443 | PREDICTED: lecithin-cholesterol acyltran | 0.744 | 0.216 | 0.673 | 3e-35 |
| >gi|147780451|emb|CAN70371.1| hypothetical protein VITISV_035399 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 95/121 (78%), Gaps = 5/121 (4%)
Query: 13 SEKRKEMKGLRFIVAMS----LFCTCQAISRGLHPLILVPGNGGNQLEARLTSDYKPSSL 68
S + +MKGL I AM ++ TCQA S LHPLILVPG+GGNQLEARLT YKPSSL
Sbjct: 478 SLQNPKMKGLGLIFAMVSMAVMWYTCQA-SSNLHPLILVPGSGGNQLEARLTDGYKPSSL 536
Query: 69 LCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPH 128
LC+R YP +KD EGWFRLWFDP+ ++ PFT+CFA RMMLYYDP LDD+ N+PGVETRVP
Sbjct: 537 LCSRLYPPLKDKEGWFRLWFDPAQVVGPFTQCFAQRMMLYYDPQLDDYVNTPGVETRVPS 596
Query: 129 F 129
F
Sbjct: 597 F 597
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458888|ref|XP_002285416.1| PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|302142173|emb|CBI19376.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|18396359|ref|NP_564286.1| Lecithin-cholesterol acyltransferase-like 1 [Arabidopsis thaliana] gi|75173439|sp|Q9FZI8.1|LCAT1_ARATH RecName: Full=Lecithin-cholesterol acyltransferase-like 1 gi|9802537|gb|AAF99739.1|AC004557_18 F17L21.27 [Arabidopsis thaliana] gi|13605855|gb|AAK32913.1|AF367326_1 At1g27480/F17L21_28 [Arabidopsis thaliana] gi|21593031|gb|AAM64980.1| unknown [Arabidopsis thaliana] gi|22137198|gb|AAM91444.1| At1g27480/F17L21_28 [Arabidopsis thaliana] gi|33339740|gb|AAQ14348.1| lecithin cholesterol acyltransferase [Arabidopsis thaliana] gi|39777538|gb|AAR31109.1| lecithine cholesterol acyltransferase-like protein [Arabidopsis thaliana] gi|332192716|gb|AEE30837.1| Lecithin-cholesterol acyltransferase-like 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|225458886|ref|XP_002283444.1| PREDICTED: lecithin-cholesterol acyltransferase-like 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255538016|ref|XP_002510073.1| 1-O-acylceramide synthase precursor, putative [Ricinus communis] gi|223550774|gb|EEF52260.1| 1-O-acylceramide synthase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|118487414|gb|ABK95535.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224129828|ref|XP_002320681.1| predicted protein [Populus trichocarpa] gi|222861454|gb|EEE98996.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|297845698|ref|XP_002890730.1| lecithin:cholesterol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336572|gb|EFH66989.1| lecithin:cholesterol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356514509|ref|XP_003525948.1| PREDICTED: lecithin-cholesterol acyltransferase-like 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| TAIR|locus:2015924 | 432 | AT1G27480 "AT1G27480" [Arabido | 0.837 | 0.25 | 0.651 | 2.1e-38 | |
| FB|FBgn0042175 | 421 | CG18858 [Drosophila melanogast | 0.612 | 0.187 | 0.436 | 2e-13 | |
| FB|FBgn0051683 | 421 | CG31683 [Drosophila melanogast | 0.612 | 0.187 | 0.436 | 2e-13 | |
| ZFIN|ZDB-GENE-010716-3 | 425 | lcat "lecithin-cholesterol acy | 0.682 | 0.207 | 0.378 | 3.1e-11 | |
| UNIPROTKB|B4DJW4 | 236 | PLA2G15 "Group XV phospholipas | 0.790 | 0.432 | 0.345 | 9.4e-11 | |
| UNIPROTKB|H3BM47 | 163 | PLA2G15 "Group XV phospholipas | 0.790 | 0.625 | 0.345 | 9.4e-11 | |
| UNIPROTKB|H3BMU8 | 298 | PLA2G15 "Group XV phospholipas | 0.790 | 0.342 | 0.345 | 2.6e-10 | |
| UNIPROTKB|Q8NCC3 | 412 | PLA2G15 "Group XV phospholipas | 0.790 | 0.247 | 0.345 | 5.9e-10 | |
| WB|WBGene00010872 | 417 | M05B5.4 [Caenorhabditis elegan | 0.658 | 0.203 | 0.391 | 2.1e-09 | |
| UNIPROTKB|Q2KIW4 | 440 | LCAT "Uncharacterized protein" | 0.666 | 0.195 | 0.376 | 3.8e-09 |
| TAIR|locus:2015924 AT1G27480 "AT1G27480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 71/109 (65%), Positives = 88/109 (80%)
Query: 22 LRFIVAMSLFCTCQAISRGLHPLILVPGNGGNQLEARLTSDYKPSSLLCNRW-YPIVKDS 80
+ +V +++ CQA+ ++PLILVPGNGGNQLE RL +YKPSS+ C+ W YPI K S
Sbjct: 12 IAILVVVTMTSMCQAVGSNVYPLILVPGNGGNQLEVRLDREYKPSSVWCSSWLYPIHKKS 71
Query: 81 EGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHF 129
GWFRLWFD +VLL PFT+CF+DRMMLYYDPDLDD+ N+PGV+TRVPHF
Sbjct: 72 GGWFRLWFDAAVLLSPFTRCFSDRMMLYYDPDLDDYQNAPGVQTRVPHF 120
|
|
| FB|FBgn0042175 CG18858 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0051683 CG31683 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-010716-3 lcat "lecithin-cholesterol acyltransferase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4DJW4 PLA2G15 "Group XV phospholipase A2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H3BM47 PLA2G15 "Group XV phospholipase A2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H3BMU8 PLA2G15 "Group XV phospholipase A2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8NCC3 PLA2G15 "Group XV phospholipase A2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00010872 M05B5.4 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2KIW4 LCAT "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 99.6 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.56 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 99.22 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 99.06 |
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-15 Score=134.10 Aligned_cols=79 Identities=46% Similarity=0.869 Sum_probs=71.2
Q ss_pred cccEEEecCCCCCccEEEeCCCCCCCc---cccccccccccCCCCcee--eecccCCCCCCCcCccccceeEEEcCCCCC
Q 036994 41 LHPLILVPGNGGNQLEARLTSDYKPSS---LLCNRWYPIVKDSEGWFR--LWFDPSVLLPPFTKCFADRMMLYYDPDLDD 115 (129)
Q Consensus 41 ~~PVILVPG~gGSqLeAkL~~~~~p~~---~~C~~~yc~~k~~~~wFr--LWln~~~liP~~~~C~~D~m~L~YD~~T~~ 115 (129)
..||+||||++|+||+++++. +|.+ |.|. +.++++|| ||.+...+++...+||.|++.|+||++|+.
T Consensus 30 ~~pv~lv~g~gg~~l~~v~~~--~p~vv~~W~~~------~~a~~~FrkrLW~~~~~l~~~~~~cw~~~~~lvld~~tGL 101 (473)
T KOG2369|consen 30 DRPVLLVPGDGGSQLHPVLDG--KPGVVRLWVCI------KCAEGYFRKRLWLDLNMLLPKTIDCWCDNEHLVLDPETGL 101 (473)
T ss_pred CCceEEecCCccccccceecC--CCCEEEEEEee------cCchHHHhHHHhhhccccccccccccccceEEeecCccCC
Confidence 349999999999999999995 3654 5565 56789999 999999999999999999999999999998
Q ss_pred ccCCCCcEEeCCCC
Q 036994 116 FHNSPGVETRVPHF 129 (129)
Q Consensus 116 ~~N~pGV~Irvp~F 129 (129)
+ +|||.+|||||
T Consensus 102 d--~pg~~lRvpgf 113 (473)
T KOG2369|consen 102 D--PPGVKLRVPGF 113 (473)
T ss_pred C--CCcceeecCCc
Confidence 7 99999999998
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 80.72 |
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.72 E-value=0.4 Score=31.52 Aligned_cols=16 Identities=25% Similarity=0.378 Sum_probs=13.3
Q ss_pred CcccEEEecCCCCCcc
Q 036994 40 GLHPLILVPGNGGNQL 55 (129)
Q Consensus 40 ~~~PVILVPG~gGSqL 55 (129)
+.+|||||.|.++|..
T Consensus 1 ~~~PvvllHG~~~~~~ 16 (268)
T d1pjaa_ 1 SYKPVIVVHGLFDSSY 16 (268)
T ss_dssp CCCCEEEECCTTCCGG
T ss_pred CCCCEEEECCCCCCHH
Confidence 3689999999998874
|