Citrus Sinensis ID: 037000

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------97
MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPKSIRAKASPEPANSKPESNSKENSMSSRIESLTIQEDVKEGEAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF
cccccccccHHHHcccccccEEEEEEEccEEEEccccccccccccccEEEEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHccccEEEEcccccccccccccccccEEEEEEccEEEEEEEEEcccccccccccEEEEEcccEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccEEEEEEccccEEEccccccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccEEEEEEEccEEEEcccccccEEEcccEEEEEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHccccEEEEcccccccccccccccccccccccccEEEEEEEEccccccEEEEEcccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccccEEEccccccHHHHHHHcccccccccccccccccccccEEEEEcccccEEEEEEccccccccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccEEcccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccHHHHHHHHcccHHHHccccHHHHHHHHHHcccc
cccccccccHHccccccccEEEEEEEccccEEEccHHHccEEEcccEEEEEEEEEcccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHccccccEEEEcccHHHccccccccccccEEEEEEcccccEEEEEcccHHHcEcccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHccHHHHHHHHccccccccccccccccccccccccEEEEEEEcccEEEEEEEEccHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHcccccccccccccccccHHHHHccccccHHHHccccHHHHHccccccccccEEEEEEEccEEEEccHHHccEEEcccEEEEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHcccEEEEcccccccEEEccccccccccccccccEEEEEcccccccEEEEEEcccHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHcccccccccccccccccccEEEEEEcccccEEEEEEccccHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHccccHccccccccEEEEEcccccccHHHHcccccccccccccccHHHHHHHHcccccccccccccccccccccEEEEEcccccHHHccccccEEcccHHHHHHHHcccccHHHHHHHcccHHHHHHcccccccccccEEEEEccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccHHHHHHHccHHHHHHHHcccHHHHHHccHHHHHHHHHHcccc
MSVSMRDLDSAFQGAGQKAGIEIWrienfkpvlvpksshgkfftgdSYVILKTTasksgalrhDIHYwlgkdtsqdeagTAAIKTVELDAALGGRAVQYREVQGHETEKFLsyfkpciipqeggiasgfkRAEAEEHktrlfvcrgkhvihvkevpfsrsslnhddifilDTQSkifqfngsnsSIQERAKALEVVQYIKDtyhdgkcevaVVEDGKLMADAEAgefwgffggfaplprkmtiseennnvvhshstklysvdkgqavpvegdslTRDLLetnkcyildCGIEVFVWMGrntslderksaSGAAEELLkgsdrsksHMIRVIEGFETVMfkskfdcwpqetnvtvsedgRGKVAALLKRQGvnvkgllkaepvkeepqafidctgnLQVWRvngqekvllsgadqtklysgdcyifqysypgdekeeiligtwfgkqsvedDRASAISLASKMVESMKflpvqariyeghepiqfFSIFQSFIVLkgglsdgyktyiaekgipdetykeDGVALFRiqgsgpdnmqaiQVEPvaaslnssycyilhndstvftwsgnltssENQELVERQLDLiklndfvqpnlqsksqkegaESEQFWELLegkseypsqkiarepesdphlfsctfskghlKVSEIYNftqddlmtedifILDCHSEIFVWVGQQVDSKSKMHALTIGEkfighdfllenlphevpiyivlegseppfftrfftwdsaktnmhgnsFQRKLSIvknggspivdkpkrrtpasyggrssvpdksqrsrsmsfspdrvrvrgrspaFNALAanfenpnarnlstpppmvrklypksvtpdseksapksSAIAALSASfektpprepiipksirakaspepanskpesnskensmssriesltiqedvkegeaedeegvpiypyerlkitstdpiteidvtkretylSSEEFREKFgmkkdafyklpkwKQNKLKMALQLF
msvsmrdlDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTrlfvcrgkhvihvkevpfsrsslnhDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNVVHSHStklysvdkgqaVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAeellkgsdrskshMIRVIEGFETVMFKSKFDCWPQETnvtvsedgrgKVAALLKRQGVNVKGLLkaepvkeepqaFIDCTGNLQVWRVNGQEKVLLSgadqtklysgDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSivknggspivdkpkrrtpasyggrssvpdksqrsrsmsfspdrvrvrgRSPAFNAlaanfenpnarnlstpppmvRKLYPKSvtpdseksapKSSAIAALsasfektpprepiipksirakaspepanskpesnskensmssriesltiqedvkegeaedeegvpiypyerlkitstdpiteidvtkretylsseefrekfgmkkdafyklpkwkqnkLKMALQLF
MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMadaeagefwgffggfaPLPRKMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPiqffsifqsfiVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPKSIRAKASPEPAnskpesnskensmssRIESLTIQedvkegeaedeegvPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF
****************QKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTI******VVH***TKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGR***************************MIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTS****ELVERQLDLIKLNDFV******************************************LFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNM*****************************************************************************************************************************************************************************VPIYPYERLKITSTDPITEIDVTKRETYLS**EFREKFGMKKDAFYKLPKWK***********
************QGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP*************AEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFG*****************VVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQE*************AALLKRQGVNVKGLL*********QAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLS***************TYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKS*KEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFL****PHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSR***************PAFNALAANFENPN*****TPPPMVRKLYPKSVTPDSEKSAP*SSAIAALS*****************************************************************YPYERLK*T*TDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF
****************QKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSL******************RSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPN*************QFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPK******************************RVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPK****************AALSASFEKTPPREPIIPKSIR***********************RIESLTIQE**********EGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF
*******LDS*FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQE********GRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPS**IAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPKSIRAKASPE**************************************VPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKM*****
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MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRNTSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHEPIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPKSIRAKASPEPANSKPESNSKENSMSSRIESLTIQEDVKEGEAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQNKLKMALQLF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query969 2.2.26 [Sep-21-2011]
O65570974 Villin-4 OS=Arabidopsis t yes no 0.988 0.983 0.775 0.0
O81644976 Villin-2 OS=Arabidopsis t no no 0.973 0.966 0.466 0.0
O81645965 Villin-3 OS=Arabidopsis t no no 0.980 0.984 0.474 0.0
O81643909 Villin-1 OS=Arabidopsis t no no 0.923 0.984 0.462 0.0
P20305772 Gelsolin (Fragment) OS=Su yes no 0.703 0.883 0.344 1e-109
Q68FP1780 Gelsolin OS=Rattus norveg yes no 0.703 0.874 0.345 1e-108
Q28372731 Gelsolin OS=Equus caballu yes no 0.703 0.932 0.341 1e-108
P06396782 Gelsolin OS=Homo sapiens yes no 0.703 0.872 0.341 1e-108
O93510778 Gelsolin OS=Gallus gallus yes no 0.705 0.879 0.345 1e-108
P13020780 Gelsolin OS=Mus musculus yes no 0.703 0.874 0.336 1e-107
>sp|O65570|VILI4_ARATH Villin-4 OS=Arabidopsis thaliana GN=VLN4 PE=1 SV=1 Back     alignment and function desciption
 Score = 1552 bits (4018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 764/985 (77%), Positives = 859/985 (87%), Gaps = 27/985 (2%)

Query: 1   MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGA 60
           MSVSMRDLD AFQGAGQKAGIEIWRIENF P  +PKSS GKFFTGDSY++LKTTA K+GA
Sbjct: 1   MSVSMRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGA 60

Query: 61  LRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120
           LRHDIHYWLGKDTSQDEAGTAA+KTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP
Sbjct: 61  LRHDIHYWLGKDTSQDEAGTAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120

Query: 121 QEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFN 180
           QEGG+ASGFK   AEEH TRLFVCRGKHV+HVKEVPF+RSSLNHDDI+ILDT+SKIFQFN
Sbjct: 121 QEGGVASGFKHVVAEEHITRLFVCRGKHVVHVKEVPFARSSLNHDDIYILDTKSKIFQFN 180

Query: 181 GSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRK 240
           GSNSSIQERAKALEVVQYIKDTYHDG CEVA VEDGKLMADA++GEFWGFFGGFAPLPRK
Sbjct: 181 GSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGKLMADADSGEFWGFFGGFAPLPRK 240

Query: 241 MTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRN 300
              + + +   +S  T+L+ V+KGQA PVEGD+L R++L+TNKCYILDCGIEVFVWMGR 
Sbjct: 241 T--ANDEDKTYNSDITRLFCVEKGQANPVEGDTLKREMLDTNKCYILDCGIEVFVWMGRT 298

Query: 301 TSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRG 360
           TSLD+RK AS AAEE+++ S+R KS MIR+IEGFETV F+SKF+ W QETN TVSEDGRG
Sbjct: 299 TSLDDRKIASKAAEEMIRSSERPKSQMIRIIEGFETVPFRSKFESWTQETNTTVSEDGRG 358

Query: 361 KVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSG 420
           +VAALL+RQGVNV+GL+KA P KEEPQ FIDCTGNLQVWRVNGQ K LL  AD +K YSG
Sbjct: 359 RVAALLQRQGVNVRGLMKAAPPKEEPQVFIDCTGNLQVWRVNGQAKTLLQAADHSKFYSG 418

Query: 421 DCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHE 480
           DCY+FQYSYPG+EKEE+LIGTWFGKQSVE++R SA+S+ASKMVESMKF+P QARIYEG E
Sbjct: 419 DCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERGSAVSMASKMVESMKFVPAQARIYEGKE 478

Query: 481 PIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVE 540
           PIQFF I QSFIV KGG+S GYK YIAEK + D+TY E+GVALFRIQGSGP+NMQAIQV+
Sbjct: 479 PIQFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGVALFRIQGSGPENMQAIQVD 538

Query: 541 PVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKE 600
           PVAASLNSSY YILHNDS+VFTW+GNL+++ +QEL ERQLDLIK      PN QS++QKE
Sbjct: 539 PVAASLNSSYYYILHNDSSVFTWAGNLSTATDQELAERQLDLIK------PNQQSRAQKE 592

Query: 601 GAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDI 660
           G+ESEQFWELL GK+EY SQK+ +EPE DPHLFSCTF+K  LKV+EIYNFTQDDLMTEDI
Sbjct: 593 GSESEQFWELLGGKAEYSSQKLTKEPERDPHLFSCTFTKEVLKVTEIYNFTQDDLMTEDI 652

Query: 661 FILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFF 720
           FI+DCHSEIFVWVGQ+V  K+K+ ALTIGEKFI  D LLE L  E PIY+++EG EP FF
Sbjct: 653 FIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFF 712

Query: 721 TRFFT-WDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKS-QRSR 778
           TRFFT WDS+K+ MHGNSFQRKL IVKNGG+P+ DKPKRRTPASYGGR+SVPDKS QRSR
Sbjct: 713 TRFFTSWDSSKSAMHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRASVPDKSQQRSR 772

Query: 779 SMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEK--SAPK 836
           SMSFSPDRVRVRGRSPAFNALAA FE+ NARNLSTPPP+VRKLYP+SVTPDS K   APK
Sbjct: 773 SMSFSPDRVRVRGRSPAFNALAATFESQNARNLSTPPPVVRKLYPRSVTPDSSKFAPAPK 832

Query: 837 SSAIAALSASFEKTPPREPIIPKSIRAKASPE-PANSKPESNS-----------KENSMS 884
           SSAIA+ SA FEK PP+EP IPK +  KASP+ P +  PESNS           +E SMS
Sbjct: 833 SSAIASRSALFEKIPPQEPSIPKPV--KASPKTPESPAPESNSKEQEEKKENDKEEGSMS 890

Query: 885 SRIESLTIQEDVKEGEAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKF 944
           SRIESLTIQED KEG  EDEE +P +PY+RLK TSTDP+++IDVT+RE YLSSEEF+EKF
Sbjct: 891 SRIESLTIQEDAKEG-VEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKF 949

Query: 945 GMKKDAFYKLPKWKQNKLKMALQLF 969
           GM K+AFYKLPKWKQNK KMA+QLF
Sbjct: 950 GMTKEAFYKLPKWKQNKFKMAVQLF 974
Ca(2+)-regulated actin-binding protein.
Arabidopsis thaliana (taxid: 3702)
>sp|O81644|VILI2_ARATH Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2 Back     alignment and function description
>sp|O81645|VILI3_ARATH Villin-3 OS=Arabidopsis thaliana GN=VLN3 PE=1 SV=2 Back     alignment and function description
>sp|O81643|VILI1_ARATH Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2 Back     alignment and function description
>sp|P20305|GELS_PIG Gelsolin (Fragment) OS=Sus scrofa GN=GSN PE=1 SV=1 Back     alignment and function description
>sp|Q68FP1|GELS_RAT Gelsolin OS=Rattus norvegicus GN=Gsn PE=1 SV=1 Back     alignment and function description
>sp|Q28372|GELS_HORSE Gelsolin OS=Equus caballus GN=GSN PE=1 SV=2 Back     alignment and function description
>sp|P06396|GELS_HUMAN Gelsolin OS=Homo sapiens GN=GSN PE=1 SV=1 Back     alignment and function description
>sp|O93510|GELS_CHICK Gelsolin OS=Gallus gallus GN=GSN PE=2 SV=1 Back     alignment and function description
>sp|P13020|GELS_MOUSE Gelsolin OS=Mus musculus GN=Gsn PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query969
297735417961 unnamed protein product [Vitis vinifera] 0.990 0.998 0.822 0.0
3594851061002 PREDICTED: LOW QUALITY PROTEIN: villin-4 0.990 0.958 0.822 0.0
224142229961 predicted protein [Populus trichocarpa] 0.980 0.988 0.814 0.0
224126139977 predicted protein [Populus trichocarpa] 0.989 0.981 0.807 0.0
449461185968 PREDICTED: villin-4-like [Cucumis sativu 0.991 0.992 0.781 0.0
449507399968 PREDICTED: LOW QUALITY PROTEIN: villin-4 0.991 0.992 0.780 0.0
356556212963 PREDICTED: villin-4-like isoform 1 [Glyc 0.989 0.995 0.808 0.0
449502955959 PREDICTED: LOW QUALITY PROTEIN: villin-4 0.986 0.996 0.780 0.0
449457185962 PREDICTED: villin-4-like [Cucumis sativu 0.989 0.996 0.780 0.0
356562154960 PREDICTED: villin-4-like isoform 1 [Glyc 0.989 0.998 0.768 0.0
>gi|297735417|emb|CBI17857.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1621 bits (4198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 798/970 (82%), Positives = 879/970 (90%), Gaps = 10/970 (1%)

Query: 1   MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGA 60
           M+VSMRDLD AFQGAGQKAGIEIWRIENF+P+ VPKSS+GKFFTGDSYVILKTTA K+GA
Sbjct: 1   MAVSMRDLDPAFQGAGQKAGIEIWRIENFRPMPVPKSSYGKFFTGDSYVILKTTALKNGA 60

Query: 61  LRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120
           LRHDIHYWLGKDT+QDEAGTAA+KTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP
Sbjct: 61  LRHDIHYWLGKDTTQDEAGTAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120

Query: 121 QEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFN 180
           Q GG+ASGFK AEAEEHKTRL+VC+GKHV+HVKEV F+RSSLNHDDIFILDT+SKIFQFN
Sbjct: 121 QPGGVASGFKHAEAEEHKTRLYVCKGKHVVHVKEVSFARSSLNHDDIFILDTKSKIFQFN 180

Query: 181 GSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRK 240
           GSNSSIQERAKALEVVQYIKDTYHDGKCEVA +EDGKLMADAE GEFWGFFGGFAPLPRK
Sbjct: 181 GSNSSIQERAKALEVVQYIKDTYHDGKCEVASIEDGKLMADAETGEFWGFFGGFAPLPRK 240

Query: 241 MTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRN 300
              + E++  V S   KL+ + KGQA PV+ DSLTR+LL+TNKCYILDCG+EVFVWMGRN
Sbjct: 241 --TANEDDKAVDSLPAKLFCILKGQAEPVQADSLTRELLDTNKCYILDCGVEVFVWMGRN 298

Query: 301 TSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRG 360
           TSLDERKSAS AAEELL+  DR KSH+IRVIEGFETVMF+SKFD WP+ T VTVSEDGRG
Sbjct: 299 TSLDERKSASSAAEELLRSLDRPKSHIIRVIEGFETVMFRSKFDMWPETTAVTVSEDGRG 358

Query: 361 KVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLYSG 420
           KVAALLKRQGVNVKGLLKA PVKEEPQ +IDCTGNLQVWRVNGQEK LLS +DQ+K YSG
Sbjct: 359 KVAALLKRQGVNVKGLLKAAPVKEEPQPYIDCTGNLQVWRVNGQEKTLLSASDQSKFYSG 418

Query: 421 DCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEGHE 480
           DCYIFQYSYPG++KEE LIGTWFGKQSVE++R SAISLA+KMVES+KFLP QARIYEG+E
Sbjct: 419 DCYIFQYSYPGEDKEEHLIGTWFGKQSVEEERTSAISLATKMVESLKFLPAQARIYEGNE 478

Query: 481 PIQFFSIFQSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVE 540
           PIQFFSIFQSFIV KGG+SDGYK YIAEK +PD+TY ED VALFR+QGSGPDNMQAIQVE
Sbjct: 479 PIQFFSIFQSFIVFKGGVSDGYKKYIAEKEVPDDTYTEDRVALFRVQGSGPDNMQAIQVE 538

Query: 541 PVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKE 600
           PVA+SLNSSYCYIL++ S+VF WSGNLT+ E+QELVERQLD+IK      PN+QSK QKE
Sbjct: 539 PVASSLNSSYCYILNSGSSVFNWSGNLTTPEDQELVERQLDVIK------PNVQSKPQKE 592

Query: 601 GAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTEDI 660
           G+ESEQFWE L GKSEYPSQKIAR+ E+DPHLFSCTFSKG+LKV+EI+NFTQDDLMTEDI
Sbjct: 593 GSESEQFWEFLGGKSEYPSQKIARDAENDPHLFSCTFSKGNLKVTEIFNFTQDDLMTEDI 652

Query: 661 FILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPPFF 720
           FILDCHSEIFVWVGQQVDSK++MHALTIGEKF+  DFLLE L H  PIYI++EGSEPPFF
Sbjct: 653 FILDCHSEIFVWVGQQVDSKNRMHALTIGEKFLERDFLLEKLSHTAPIYIIMEGSEPPFF 712

Query: 721 TRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGR-SSVPDKSQRSRS 779
           TRFFTWDS K+ M GNSFQRKL+IVKNG SP  +KPKRRTP SYGGR SS+P+KSQRSRS
Sbjct: 713 TRFFTWDSGKSAMQGNSFQRKLAIVKNGISPTPEKPKRRTPVSYGGRSSSLPEKSQRSRS 772

Query: 780 MSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSA 839
           MSFSPDRVRVRGRSPAFNALAANFENPN+RNLSTPPPMVRKLYPKSVTPDS K   +S+A
Sbjct: 773 MSFSPDRVRVRGRSPAFNALAANFENPNSRNLSTPPPMVRKLYPKSVTPDSSKLDSRSAA 832

Query: 840 IAALSASFEKTPPREPIIPKSIRAKASPEPANSKPESNSKENSMSSRIESLTIQEDVKEG 899
           IAALSASFE+ P REP++PK+ +          KPE+NSKE +MSSRIE+LTI+EDVKEG
Sbjct: 833 IAALSASFEQ-PAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIEALTIEEDVKEG 891

Query: 900 EAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYKLPKWKQ 959
           EAEDEEG+PIYPYERLK TS +P+ EIDVTKRETYLSSEEFR+KFGM KDAFYKLPKWKQ
Sbjct: 892 EAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTKDAFYKLPKWKQ 951

Query: 960 NKLKMALQLF 969
           NKLKMALQLF
Sbjct: 952 NKLKMALQLF 961

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359485106|ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142229|ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|222865895|gb|EEF03026.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224126139|ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|222870551|gb|EEF07682.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449461185|ref|XP_004148322.1| PREDICTED: villin-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449507399|ref|XP_004163020.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356556212|ref|XP_003546420.1| PREDICTED: villin-4-like isoform 1 [Glycine max] gi|356556214|ref|XP_003546421.1| PREDICTED: villin-4-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|449502955|ref|XP_004161789.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449457185|ref|XP_004146329.1| PREDICTED: villin-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356562154|ref|XP_003549338.1| PREDICTED: villin-4-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query969
TAIR|locus:2165570962 VLN5 "villin 5" [Arabidopsis t 0.985 0.992 0.654 0.0
TAIR|locus:2082523965 VLN3 "villin 3" [Arabidopsis t 0.986 0.990 0.460 5.3e-230
TAIR|locus:2054401976 VLN2 "villin 2" [Arabidopsis t 0.981 0.974 0.460 1.1e-229
RGD|1307048827 Vil1 "villin 1" [Rattus norveg 0.729 0.854 0.335 1.3e-107
UNIPROTKB|I3LI80819 AVIL "Uncharacterized protein" 0.722 0.854 0.328 1.9e-106
MGI|MGI:98930827 Vil1 "villin 1" [Mus musculus 0.730 0.856 0.335 1.3e-105
UNIPROTKB|F1ND31828 VIL1 "Villin-1" [Gallus gallus 0.711 0.832 0.335 9.4e-105
UNIPROTKB|Q5E9Z3827 VIL1 "Villin 1" [Bos taurus (t 0.746 0.874 0.315 4e-104
UNIPROTKB|E1C5U6865 VILL "Uncharacterized protein" 0.727 0.815 0.320 1.1e-103
UNIPROTKB|Q3SZP7827 VIL1 "Villin-1" [Bos taurus (t 0.746 0.874 0.314 1.4e-103
TAIR|locus:2165570 VLN5 "villin 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3336 (1179.4 bits), Expect = 0., P = 0.
 Identities = 639/976 (65%), Positives = 759/976 (77%)

Query:     1 MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGA 60
             M+ SMRDLD A QGAGQK+GIEIWRIENFKPV VP+ SHGKFFTGDSY++LKTTAS+SG+
Sbjct:     1 MTFSMRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGS 60

Query:    61 LRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP 120
             L HDIHYWLGKD+SQDEAG  A+ TVELD+ALGGRAVQYREVQGHETEKFLSYFKPCIIP
Sbjct:    61 LHHDIHYWLGKDSSQDEAGAVAVMTVELDSALGGRAVQYREVQGHETEKFLSYFKPCIIP 120

Query:   121 QEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFN 180
             QEGG+ASGF   + EEH+TRL++C+GKHV+ VKEVPF RS+LNH+D+FILDT+SKIFQF+
Sbjct:   121 QEGGVASGFNHVKPEEHQTRLYICKGKHVVRVKEVPFVRSTLNHEDVFILDTESKIFQFS 180

Query:   181 GSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRK 240
             GS SSIQERAKALEVVQYIKDTYHDGKC++A VEDG++M                PLP+K
Sbjct:   181 GSKSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRMMADAEAGEFWGLFGGFAPLPKK 240

Query:   241 MTISEENNNVVHSHSTKLYSVDKGQAVPVEGDSLTRDLLETNKCYILDCGIEVFVWMGRN 300
               ++++      S   KL+SV+KGQ   VE + LT++LL+TNKCYILDCG+E+FVW GR+
Sbjct:   241 PAVNDDETAA--SDGIKLFSVEKGQTDAVEAECLTKELLDTNKCYILDCGLELFVWKGRS 298

Query:   301 TSLDERKSASGAAEELLKGSDRSKSHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRG 360
             TS+D+RKSA+ AAEE  + S+  KS+++ V+EG+ETVMF+SKFD WP  + +   + GRG
Sbjct:   299 TSIDQRKSATEAAEEFFRSSEPPKSNLVSVMEGYETVMFRSKFDSWPASSTIAEPQQGRG 358

Query:   361 KVAALLKRQGVNVKGLLK--AEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLY 418
             KVAALL+RQGVNV+GL+K  +   K+EP+ +ID TGNLQVWR+N +EK+LL  A+Q+K Y
Sbjct:   359 KVAALLQRQGVNVQGLVKTSSSSSKDEPKPYIDGTGNLQVWRINCEEKILLEAAEQSKFY 418

Query:   419 SGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEG 478
             SGDCYI QYSYPG+++EE L+GTWFGKQSVE+DRASAISLA+KMVESMKF+P QARI EG
Sbjct:   419 SGDCYILQYSYPGEDREEHLVGTWFGKQSVEEDRASAISLANKMVESMKFVPAQARINEG 478

Query:   479 HEPXXXXXXXXXXXVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQ 538
              EP             KGG+SD +K YIAE  IPD TY+ +GVALFR+QGSGP+NMQAIQ
Sbjct:   479 KEPIQFFVIMQSFITFKGGVSDAFKKYIAENDIPDTTYEAEGVALFRVQGSGPENMQAIQ 538

Query:   539 VEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQ 598
             +E  +A LNSS+CYILH DSTVFTW GNLTSSE+QEL+ER LDLIK      PN  +K+Q
Sbjct:   539 IEAASAGLNSSHCYILHGDSTVFTWCGNLTSSEDQELMERMLDLIK------PNEPTKAQ 592

Query:   599 KEGAESEQFWELLEGKSEYPSQKIAREPESDPHLFSCTFSKGHLKVSEIYNFTQDDLMTE 658
             KEG+ESEQFWELL GKSEYPSQKI R+ ESDPHLFSCT++   LK +EI+NFTQDDLMTE
Sbjct:   593 KEGSESEQFWELLGGKSEYPSQKIKRDGESDPHLFSCTYTNESLKATEIFNFTQDDLMTE 652

Query:   659 DIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVLEGSEPP 718
             DIFILDCH+E+FVWVGQQVD K K  AL IGE F+ HDFLLENL  E PIYIV EG+EPP
Sbjct:   653 DIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLLENLASETPIYIVTEGNEPP 712

Query:   719 FFTRFFTWDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQ-RS 777
             FFTRFFTWDS+K+ MHG+SFQRKL+I+ N G P++DKPKRR PA Y  RS+VPDKSQ RS
Sbjct:   713 FFTRFFTWDSSKSGMHGDSFQRKLAILTNKGKPLLDKPKRRVPA-YSSRSTVPDKSQPRS 771

Query:   778 RSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPMV----RKLYPKSVTPDSEKS 833
             RSM+FSPDR RVRGRSPAFNALAANFE  N RN STPPPMV    RKLYPKS  PD  K 
Sbjct:   772 RSMTFSPDRARVRGRSPAFNALAANFEKLNIRNQSTPPPMVSPMVRKLYPKSHAPDLSKI 831

Query:   834 APKSSAIAALSASFEKTPPREPIIPKSIRAKASPEPAXXXXXXXXXXXXXXXRIESLTIQ 893
             APKS AIAA +A FEK  P     P S    +S E                    S +I 
Sbjct:   832 APKS-AIAARTALFEKPTPTSQEPPTS---PSSSEATNQAEAPKSTSETNEEEAMS-SIN 886

Query:   894 XXXXXXXXXXXXXXPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKDAFYK 953
                           P +PYERLK  S DP++++D+T+RE YL+S EF+EKF M K+ FYK
Sbjct:   887 EDSKEEEAEEESSLPTFPYERLKTDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFYK 946

Query:   954 LPKWKQNKLKMALQLF 969
             LPKWKQNKLKM++ LF
Sbjct:   947 LPKWKQNKLKMSVNLF 962
GO:0003779 "actin binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0007010 "cytoskeleton organization" evidence=IEA;ISS
TAIR|locus:2082523 VLN3 "villin 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054401 VLN2 "villin 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1307048 Vil1 "villin 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I3LI80 AVIL "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:98930 Vil1 "villin 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1ND31 VIL1 "Villin-1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E9Z3 VIL1 "Villin 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1C5U6 VILL "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZP7 VIL1 "Villin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65570VILI4_ARATHNo assigned EC number0.77560.98860.9835yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query969
cd11290113 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-l 1e-67
cd11293101 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-l 5e-41
cd1129199 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-l 2e-39
cd1128992 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-l 2e-31
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 1e-29
cd1128892 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-l 3e-27
cd11293101 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-l 4e-27
smart0026290 smart00262, GEL, Gelsolin homology domain 4e-26
smart0026290 smart00262, GEL, Gelsolin homology domain 5e-21
smart0026290 smart00262, GEL, Gelsolin homology domain 9e-18
smart0026290 smart00262, GEL, Gelsolin homology domain 4e-17
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 1e-16
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 8e-16
smart0026290 smart00262, GEL, Gelsolin homology domain 9e-16
smart0015336 smart00153, VHP, Villin headpiece domain 4e-13
pfam0220936 pfam02209, VHP, Villin headpiece domain 4e-13
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 4e-13
smart0026290 smart00262, GEL, Gelsolin homology domain 2e-12
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 3e-12
cd1129199 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-l 3e-11
cd11290113 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-l 3e-10
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 3e-10
cd1128892 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-l 7e-10
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 4e-08
cd1129199 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-l 6e-08
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 8e-08
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 1e-07
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 2e-07
cd1129298 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-l 2e-06
pfam0062676 pfam00626, Gelsolin, Gelsolin repeat 3e-06
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 7e-05
cd1128992 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-l 0.001
cd1128088 cd11280, gelsolin_like, Tandemly repeated domains 0.001
cd1128992 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-l 0.002
COG5028861 COG5028, COG5028, Vesicle coat complex COPII, subu 0.002
cd1128892 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-l 0.004
>gnl|CDD|200446 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information 
 Score =  220 bits (564), Expect = 1e-67
 Identities = 78/113 (69%), Positives = 93/113 (82%)

Query: 12  FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
           F+G GQK G++IWRIENF+ V VP+S +GKF+ GDSY++LKTT   SG+L +DIHYWLGK
Sbjct: 1   FEGVGQKPGLQIWRIENFELVPVPESFYGKFYEGDSYIVLKTTLDPSGSLSYDIHYWLGK 60

Query: 72  DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGG 124
           + SQDEAG AAIK VELD  LGGR VQ+REVQGHE+E+FLSYFK  II  EGG
Sbjct: 61  EASQDEAGAAAIKAVELDDYLGGRPVQHREVQGHESEEFLSYFKKGIIYIEGG 113

Gelsolin repeats occur in gelsolin, severin, villin, advillin, villidin, supervillin, flightless, quail, fragmin, and other proteins, usually in several copies. They co-occur with villin headpiece domains, leucine-rich repeats, and several other domains. These gelsolin-related actin binding proteins (GRABPs) play regulatory roles in the assembly and disassembly of actin filaments; they are involved in F-actin capping, uncapping, severing, or the nucleation of actin filaments. Severing of actin filaments is Ca2+ dependent. Villins are also linked to generating bundles of F-actin with uniform filament polarity, which is most likely mediated by their extra villin headpiece domain. Many family members have also adopted functions in the nucleus, including the regulation of transcription. Supervillin, gelsolin, and flightless I are involved in intracellular signaling via nuclear hormone receptors. The gelsolin_like domain is distantly related to the actin depolymerizing domains found in cofilin and similar proteins. Length = 113
>gnl|CDD|200449 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200447 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200445 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200444 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200449 cd11293, gelsolin_S4_like, Gelsolin sub-domain 4-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|128458 smart00153, VHP, Villin headpiece domain Back     alignment and domain information
>gnl|CDD|202157 pfam02209, VHP, Villin headpiece domain Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|214590 smart00262, GEL, Gelsolin homology domain Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|200447 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200446 cd11290, gelsolin_S1_like, Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200444 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|200447 cd11291, gelsolin_S6_like, Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200448 cd11292, gelsolin_S3_like, Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|201354 pfam00626, Gelsolin, Gelsolin repeat Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200445 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200436 cd11280, gelsolin_like, Tandemly repeated domains found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|200445 cd11289, gelsolin_S2_like, Gelsolin sub-domain 2-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information
>gnl|CDD|227361 COG5028, COG5028, Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|200444 cd11288, gelsolin_S5_like, Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 969
KOG0443827 consensus Actin regulatory proteins (gelsolin/vill 100.0
KOG04441255 consensus Cytoskeletal regulator Flightless-I (con 100.0
KOG0445919 consensus Actin regulatory protein supervillin (ge 100.0
KOG0443827 consensus Actin regulatory proteins (gelsolin/vill 100.0
KOG0444 1255 consensus Cytoskeletal regulator Flightless-I (con 100.0
KOG0445919 consensus Actin regulatory protein supervillin (ge 100.0
PF0220936 VHP: Villin headpiece domain; InterPro: IPR003128 99.68
smart0015336 VHP Villin headpiece domain. 99.67
smart0026290 GEL Gelsolin homology domain. Gelsolin/severin/vil 99.66
smart0026290 GEL Gelsolin homology domain. Gelsolin/severin/vil 99.64
KOG1044670 consensus Actin-binding LIM Zn-finger protein Lima 99.42
PF0062676 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gel 99.33
PF0062676 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gel 99.31
COG5028861 Vesicle coat complex COPII, subunit SEC24/subunit 96.23
PTZ003951560 Sec24-related protein; Provisional 95.62
KOG19841007 consensus Vesicle coat complex COPII, subunit SFB3 95.53
PTZ003951560 Sec24-related protein; Provisional 94.14
KOG19841007 consensus Vesicle coat complex COPII, subunit SFB3 93.53
KOG1985887 consensus Vesicle coat complex COPII, subunit SEC2 93.3
COG5028861 Vesicle coat complex COPII, subunit SEC24/subunit 92.92
KOG1985887 consensus Vesicle coat complex COPII, subunit SEC2 88.8
PLN00162761 transport protein sec23; Provisional 81.28
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=1e-219  Score=1870.49  Aligned_cols=816  Identities=57%  Similarity=0.966  Sum_probs=751.7

Q ss_pred             CCccccccchhhhcCCccccEEEEEEECceeeecCCCCccceecCCEEEEEEeeecCCCCcceEEEEEecCCCChhhHhH
Q 037000            1 MSVSMRDLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGT   80 (969)
Q Consensus         1 ~~~~~~~~~~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~   80 (969)
                      |+++|.++|++|+++|+++||+|||||||++++||++.||+||+|||||||+|+.++++.+.|+||||||+++|+||+|+
T Consensus         1 ~s~~~~~ld~af~~ag~~pGl~IWRIe~f~lv~VP~s~~G~Fy~GdaYIvL~t~~~k~~~l~~DIHyWLGkd~S~dE~g~   80 (827)
T KOG0443|consen    1 MSMSMLDLDPAFQGAGQKPGLEIWRIENFELVPVPKSSHGKFYTGDAYIVLKTTLKKNGSLSYDIHYWLGKDSSQDEAGA   80 (827)
T ss_pred             CCccccccCHHHHhcccCCceEEEEeccCeeeecchhccCceecCceEEEEehhhccCCccceeEEEEecCccchhhhcc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCceEEEeeccCCcHhHHhccCCcEEEecCccCCCCccccccccceEEEEEeecceEEEEEecCCCC
Q 037000           81 AAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEHKTRLFVCRGKHVIHVKEVPFSRS  160 (969)
Q Consensus        81 AA~~aveLd~~Lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rL~~vkGkr~v~~~eV~~s~s  160 (969)
                      ||++|+|||+.|||.+|||||||||||+.||+|||+||||++||++|||+||+++.+.+|||||||+|+||++|||++|+
T Consensus        81 aAiktveLD~~Lgg~~vQhREVQg~ES~~FLsYFK~gi~~~~GGv~Sg~khv~~~~~~~rL~~~KGkr~vr~~eV~~~~s  160 (827)
T KOG0443|consen   81 AAIKTVELDDYLGGRAVQHREVQGHESEKFLSYFKPGIIYQEGGVASGFKHVETEEYQVRLFHCKGKRNVRVKEVPFSWS  160 (827)
T ss_pred             eeeeeEehhhhhCCCcceeehhcccchHHHHhhccCCceecccccccCcccccccceeeEEEEEccceeEEEEEEEeehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCcceeecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCccccccchhhHHHHcCCCCC-CCC
Q 037000          161 SLNHDDIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAP-LPR  239 (969)
Q Consensus       161 SLns~DvFILd~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~~~e~~eFw~~lGg~~~-~~~  239 (969)
                      |||++||||||+++.||||+|++||++||+||+++|+.|+|++|+|||+|.+||+|++..+++..+||..+||.++ +++
T Consensus       161 S~N~gDvFILD~g~~i~qw~G~~Ss~~ER~KAl~~~~~IrD~e~~Gr~~V~vvdd~~~~~d~d~~~~~~~~~g~~~~~~~  240 (827)
T KOG0443|consen  161 SLNHGDVFILDTGSKIYQWNGPNSSIQERAKALEVVQYIRDNERDGRCEVAVVDDGKEAADSDLGEFWGFVLGFAPALPK  240 (827)
T ss_pred             hcCCCcEEEEEcCCceEEEcCCcccHHHHHHHHHHHHHhhccCCCCceeEEEecCcccccCchHHHHHHhhcCcCccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999988 554


Q ss_pred             CCCcCccccccccccceEEEEee--CCCccc--ccCCCCcccccCCCcEEEEeCC-eEEEEEecCCCCHHHHHHHHHHHH
Q 037000          240 KMTISEENNNVVHSHSTKLYSVD--KGQAVP--VEGDSLTRDLLETNKCYILDCG-IEVFVWMGRNTSLDERKSASGAAE  314 (969)
Q Consensus       240 ~~~~~~~~~~~~~~~~~rLy~v~--~G~l~~--~e~~~lsq~~L~~~~vyILD~g-~eIyVW~Gk~as~~eR~~A~~~A~  314 (969)
                      ..  ++.++.+.....++||+|+  .|.+.+  +...||+|+||++++||||||| .+||||+|++|+.+||++||..|+
T Consensus       241 ~~--~~~~~~~~~s~~~kLYkVsd~~g~l~v~~va~~~l~qdlLd~~dCYILD~g~~~IfVW~Gr~as~~ERkaAm~~Ae  318 (827)
T KOG0443|consen  241 KS--PDDDDEQANSAAAKLYKVSDASGGLKVPVVADGPLTKDLLDTEDCYILDCGGGEIFVWKGRQASLDERKAAMSSAE  318 (827)
T ss_pred             CC--cchhhhhhhccccEEEEEeccCCCccccccccchhhHHhhccCCeEEEecCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            33  3335566778899999999  366544  4556799999999999999998 999999999999999999999999


Q ss_pred             HHHhcCCCCC-ceEEEecCCccchhhhcccccCCcCCccccccCcchhhhhhhhhcccccccccccCCCcCCCcccccCC
Q 037000          315 ELLKGSDRSK-SHMIRVIEGFETVMFKSKFDCWPQETNVTVSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCT  393 (969)
Q Consensus       315 ~~i~~~~rp~-t~i~~V~eG~Ep~~FK~~F~~W~~~~~~~~~~~~~~kva~~~~~~~~dv~~l~~~~p~~~~~~~~~d~t  393 (969)
                      +||++++||. |+|++|.||.|++.||++|.+|++..++.+.+.++|++|++++++++||..|+++.+.+++++++|||+
T Consensus       319 eFlk~k~yP~~TqV~rv~EG~Esa~FKq~F~~W~~~~~t~~~~~~rG~va~l~q~~~~Dv~~L~~~~~~aa~~~mvddg~  398 (827)
T KOG0443|consen  319 EFLKKKKYPPNTQVVRVLEGAESAPFKQLFDSWPDKDQTNGKEEGRGKVAALLQVKGFDVTGLHKSPKMAAQPQMVDDGS  398 (827)
T ss_pred             HHHHhccCCCCceEEEecCCCcchhHHHHHhhCccccccccccccccccceeeeecccchhhcccCccccccccceecCC
Confidence            9999999988 999999999999999999999999998877888999999999888999999987766667777889999


Q ss_pred             ccEEEEEEeCCeeeecCCccccccccCcEEEEEeecCC-CCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCCCeE
Q 037000          394 GNLQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPG-DEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQ  472 (969)
Q Consensus       394 g~l~VWrIe~~~~~~v~~~~~G~FysgdcYIVlytY~~-~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~~vq  472 (969)
                      |+++||||++.++++||..++|+||+||||||+|+|+. +.+.+|+||.|+|++|+++|+++|+.+|++|++.++|.|+|
T Consensus       399 G~~~Vwrv~~~~~~~v~~~~~g~fy~GdcYlvlYtY~~~~~~~~~iiY~W~G~qAs~ee~~~a~~~A~~l~~s~kg~~vq  478 (827)
T KOG0443|consen  399 GKLQVWRVEGDEKQPVDIADYGKFYGGDCYLVLYTYPRGEERTEHIIYVWQGKQASQEERAAAISLAKALVESLKGVPVQ  478 (827)
T ss_pred             CcEEEEEEcCceeeecChHHhCcccCCCeEEEEEeeccCCcccceEEEEEecccCCHHHHHHHHHHHHHHhhhcCCceeE
Confidence            99999999999999999999999999999999999984 45999999999999999999999999999999999999999


Q ss_pred             EEeeccCCChHHHhhcCc-EEEEeCcccCCccccccccCCCCCcccCCceEEEEEEecCCCCeEEEEeccCcCCCCCCCe
Q 037000          473 ARIYEGHEPIQFFSIFQS-FIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYC  551 (969)
Q Consensus       473 ~Rv~QGkEp~~Fl~lF~~-~ii~~Gg~~s~f~~~~~~~~~~~~~~~~~~~~Lf~V~G~~~~~~~a~eV~~~~ssLnS~d~  551 (969)
                      +|++|||||+|||+||++ |||++||++.           .+++|+...++||||+|+.++|++|+||++.++||||+||
T Consensus       479 ~rv~~GkEP~hF~~iFqgkliifkgg~s~-----------~g~~~~~~~t~LFqV~Gt~~~n~kAveV~~~A~SLNSsd~  547 (827)
T KOG0443|consen  479 VRIYEGKEPPHFLAIFQGKLIIFKGGTSE-----------EGNTYPAPSTRLFQVQGTGPSNTKAVEVPAVASSLNSSDC  547 (827)
T ss_pred             EEeecCCCChHHHHhhCCceEEEecCcCC-----------CCCccCCCceEEEEEeccCcccceeEeeccccccccccce
Confidence            999999999999999998 9999999873           2346778889999999999999999999999999999999


Q ss_pred             EEEecCCeEEEEECCCCCHHHHHHHHHHHHHhhccCCCCCCcceEeeccCCChhHHHHhcCCCCCCCCccc-cCCCCCCC
Q 037000          552 YILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKI-AREPESDP  630 (969)
Q Consensus       552 FIL~~~~~vylW~Gk~ss~~er~~A~~va~~l~~~~~~~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~-~~~~~~~p  630 (969)
                      |||++++++|+|||++|+++||+||+.++..|+       +.+...+.||+||++||++|||+.+|++.++ .....++|
T Consensus       548 fvL~t~s~~ylW~G~gss~~e~e~A~~v~~~l~-------~~~~~~v~EG~Ep~~FWe~LGGk~~Y~~sk~~~~~~~~~P  620 (827)
T KOG0443|consen  548 FVLKTGSSVYLWCGKGSSGDEREMAKRVLDLLK-------RCQSTAVKEGSEPDEFWELLGGKAEYPSSKRLEEKPERDP  620 (827)
T ss_pred             EEEecCCeEEEEeCCCCCHHHHHHHHHHHHHHh-------cCChhhhhcCCCchhhHHHcCCCCCCCcCccccccCCCCC
Confidence            999999999999999999999999999999997       2346789999999999999999999999985 34456899


Q ss_pred             eeEEEEeccCeeEEeccccccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHHHHHHHHhhccccCCCCCCCCcEEE
Q 037000          631 HLFSCTFSKGHLKVSEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYI  710 (969)
Q Consensus       631 rLF~~s~~~G~~~v~Ei~~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~A~~Yl~~~~~~~~r~~~tpI~v  710 (969)
                      |||.|++.+|.|.++||++|+||||++|||||||||++||||||++++++||..|+.+|++|++++ ..+||++.|||++
T Consensus       621 rLF~Cs~~~g~f~~~EI~~F~QdDL~tdDi~lLDt~~evfvWvG~~a~~~eK~~Al~~~~~yl~~~-~p~gr~~~TPI~v  699 (827)
T KOG0443|consen  621 RLFSCSNKTGSFVVEEIYNFTQDDLMTDDIMLLDTWSEVFVWVGQEANEKEKEEALTIGQKYLETD-LPEGRDPRTPIYV  699 (827)
T ss_pred             cEEEEEecCCcEEEEEecCcchhhccccceEEEecCceEEEEecCCCChhHHHHHHHHHHHHHhcc-CcccCCCCCceEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999 4459999999999


Q ss_pred             ecCCCCCcccccccc-ccccccccCCchHHHHHHHhhCCCCCCCCCCCccCCCCCCCCCCCCCCcccccccccCCCcccc
Q 037000          711 VLEGSEPPFFTRFFT-WDSAKTNMHGNSFQRKLSIVKNGGSPIVDKPKRRTPASYGGRSSVPDKSQRSRSMSFSPDRVRV  789 (969)
Q Consensus       711 V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  789 (969)
                      |+||+||++||+||. ||+.||     ||+++++.|+++.                                        
T Consensus       700 V~qG~EPp~Ftg~F~~WD~~kw-----S~~~~~~~l~~~~----------------------------------------  734 (827)
T KOG0443|consen  700 VKQGHEPPFFTGFFLSWDPSKW-----SFQKKLKDLKNKV----------------------------------------  734 (827)
T ss_pred             ecCCCCCChhhccccccCCccc-----ccchHHHHHhccc----------------------------------------
Confidence            999999999999999 999984     6788888898852                                        


Q ss_pred             cCCCchhhhcccccCCCCCCCCCCCCccccccCCCCCCCCCCCCCchhhHHHhhhccccCCCCCCCCCcccccccCCCCC
Q 037000          790 RGRSPAFNALAANFENPNARNLSTPPPMVRKLYPKSVTPDSEKSAPKSSAIAALSASFEKTPPREPIIPKSIRAKASPEP  869 (969)
Q Consensus       790 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  869 (969)
                      .+++.++++++++++|.              +++.+..+++                                       
T Consensus       735 ~~~~~~~~~~~a~~~sk--------------~~~~~~~~~~---------------------------------------  761 (827)
T KOG0443|consen  735 TYNARAISEISADVRSK--------------LYPDSLNPDS---------------------------------------  761 (827)
T ss_pred             ccchhhccchhhhhhcc--------------cccccCCCCc---------------------------------------
Confidence            24455666677666662              2222222110                                       


Q ss_pred             CCCCCCCCccccCccccccccccccccccCcccCCCCCCccChhhhhcccCCCCCCCCccccccCCCHHhHHHHhCCCHH
Q 037000          870 ANSKPESNSKENSMSSRIESLTIQEDVKEGEAEDEEGVPIYPYERLKITSTDPITEIDVTKRETYLSSEEFREKFGMKKD  949 (969)
Q Consensus       870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~vd~~~~e~yLs~~~F~~~f~m~~~  949 (969)
                                                        .....+|||++|+.++.++.++|||+|||.|||++||+.+|||+|+
T Consensus       762 ----------------------------------~~p~~~~~~e~l~~~~~~~~~~id~~rrE~yLs~~dF~~~Fgmtk~  807 (827)
T KOG0443|consen  762 ----------------------------------EAPRPAFPYEQLLTQSEDPVPDIDPTRREAYLSEEEFVSVFGMTKE  807 (827)
T ss_pred             ----------------------------------cCcccCCCHHHHhccccCcCCCCChhHhhhhccHHHHHHHhCcCHH
Confidence                                              0011479999999986655444999999999999999999999999


Q ss_pred             HHhcCchhHHHhhhhhcCCC
Q 037000          950 AFYKLPKWKQNKLKMALQLF  969 (969)
Q Consensus       950 ~f~~lp~wkq~~~kk~~~Lf  969 (969)
                      |||+||+|||++|||+.+||
T Consensus       808 eF~~LPkWKq~~lKk~~~LF  827 (827)
T KOG0443|consen  808 EFYALPKWKQNKLKKQFGLF  827 (827)
T ss_pred             HHhhcchhHHHHHhhhhccC
Confidence            99999999999999999999

>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] Back     alignment and domain information
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] Back     alignment and domain information
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton] Back     alignment and domain information
>PF02209 VHP: Villin headpiece domain; InterPro: IPR003128 Villin is an F-actin bundling protein involved in the maintenance of the microvilli of the absorptive epithelia Back     alignment and domain information
>smart00153 VHP Villin headpiece domain Back     alignment and domain information
>smart00262 GEL Gelsolin homology domain Back     alignment and domain information
>smart00262 GEL Gelsolin homology domain Back     alignment and domain information
>KOG1044 consensus Actin-binding LIM Zn-finger protein Limatin involved in axon guidance [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) [] Back     alignment and domain information
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) [] Back     alignment and domain information
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] Back     alignment and domain information
>PTZ00395 Sec24-related protein; Provisional Back     alignment and domain information
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PTZ00395 Sec24-related protein; Provisional Back     alignment and domain information
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PLN00162 transport protein sec23; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query969
3ffn_A782 Crystal Structure Of Calcium-Free Human Gelsolin Le 1e-105
1d0n_A729 The Crystal Structure Of Calcium-Free Equine Plasma 1e-105
2fgh_A731 Atp Bound Gelsolin Length = 731 1e-105
3ffk_A377 Crystal Structure Of Human Gelsolin Domains G1-G3 B 2e-61
3ffk_A377 Crystal Structure Of Human Gelsolin Domains G1-G3 B 6e-16
1rgi_G346 Crystal Structure Of Gelsolin Domains G1-G3 Bound T 2e-61
1rgi_G346 Crystal Structure Of Gelsolin Domains G1-G3 Bound T 6e-15
1j72_A347 Crystal Structure Of Mutant Macrophage Capping Prot 3e-45
1j72_A347 Crystal Structure Of Mutant Macrophage Capping Prot 3e-17
1jhw_A347 Ca2+-Binding Mimicry In The Crystal Structure Of Th 1e-44
1jhw_A347 Ca2+-Binding Mimicry In The Crystal Structure Of Th 2e-17
1nph_A329 Gelsolin Domains 4-6 In Active, Actin Free Conforma 2e-40
1p8x_A344 The Calcium-activated C-terminal Half Of Gelsolin L 2e-39
1h1v_G331 Gelsolin G4-G6ACTIN COMPLEX Length = 331 2e-39
3fg7_A398 The Crystal Structure Of Villin Domain 6 Length = 3 1e-38
1t44_G147 Structural Basis Of Actin Sequestration By Thymosin 6e-36
1p8z_G136 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 2e-35
1d4x_G126 Crystal Structure Of Caenorhabditis Elegans Mg-Atp 9e-35
2ff3_A150 Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Mo 2e-34
1yag_G125 Structure Of The Yeast Actin-human Gelsolin Segment 3e-34
3ci5_G126 Complex Of Phosphorylated Dictyostelium Discoideum 4e-34
1eqy_S125 Complex Between Rabbit Muscle Alpha-Actin: Human Ge 5e-34
3cip_G128 Complex Of Dictyostelium Discoideum Actin With Gels 5e-34
1c0f_S127 Crystal Structure Of Dictyostelium Caatp-Actin In C 5e-34
3tu5_B297 Actin Complex With Gelsolin Segment 1 Fused To Cobl 2e-33
2vik_A126 Refined Structure Of The Actin-Severing Domain Vill 2e-31
2vik_A126 Refined Structure Of The Actin-Severing Domain Vill 2e-06
3fg6_A371 Structure Of The C-terminus Of Adseverin Length = 3 3e-31
2llf_A107 Sixth Gelsolin-like Domain Of Villin In 5 Mm Cacl2 3e-11
1kcq_A104 Human Gelsolin Domain 2 With A Cd2+ Bound Length = 5e-11
1svy_A114 Severin Domain 2, 1.75 Angstrom Crystal Structure L 1e-10
1svq_A114 Structure Of Severin Domain 2 In Solution Length = 1e-10
1ujs_A88 Solution Structure Of The Villin Headpiece Domain O 1e-05
2l3x_A67 Villin Head Piece Domain Of Human Ablim2 Length = 6 2e-05
2rjv_A67 Crystal Structure Of The H41y Mutant Of Villin Head 4e-05
3myc_A67 Crystal Structure Of Hp67 H41f - P212121 Length = 6 6e-05
1yu5_X67 Crystal Structure Of The Headpiece Domain Of Chicke 9e-05
1zv6_A68 Nmr Structure Of The Human Dematin Headpiece S74e M 1e-04
1yu8_X67 Crystal Structure Of The R37a Mutant Of Villin Head 2e-04
1qzp_A68 Nmr Structure Of The Human Dematin Headpiece Domain 2e-04
3nkj_A67 Crystal Structure Of Hp67 L61g Length = 67 7e-04
>pdb|3FFN|A Chain A, Crystal Structure Of Calcium-Free Human Gelsolin Length = 782 Back     alignment and structure 
Iteration: 1

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 248/742 (33%), Positives = 377/742 (50%), Gaps = 62/742 (8%)
Query: 12  FQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGK 71
           F  AG++ G++IWR+E F  V VP + +G FFTGD+YVILKT   ++G L++D+HYWLG 
Sbjct: 59  FLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGN 118
Query: 72  DTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKR 131
           + SQDE+G AAI TV+LD  L GRAVQ+REVQG E+  FL YFK  +  ++GG+ASGFK 
Sbjct: 119 ECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 178
Query: 132 AEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQERA 190
               E    RLF  +G+ V+   EVP S  S N+ D FILD  + I Q+ GSNS+  ER 
Sbjct: 179 VVPNEVVVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERL 238
Query: 191 KALEVVQYIKDTYHDGKCEVAVVEDGKLMXXXXXXXXXXXXXXXXPLPRKMTISEEN--N 248
           KA +V + I+D    G+  V V E+G                   P P     +E+    
Sbjct: 239 KATQVSKGIRDNERSGRARVHVSEEG--------TEPEAMLQVLGPKPALPAGTEDTAKE 290
Query: 249 NVVHSHSTKLYSVDKGQ-----AVPVEGDSLTRDLLETNKCYILDCGIE--VFVWMGRNT 301
           +  +    KLY V  G      ++  + +   +  L++  C+ILD G +  +FVW G+  
Sbjct: 291 DAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQA 350
Query: 302 SLDERKSASGAAEELLKGSDRSKSHMIRVI-EGFETVMFKSKFDCW--PQETNVTVSEDG 358
           + +ERK+A   A + +   D  K   + V+ EG ET +FK  F  W  P +T      DG
Sbjct: 351 NTEERKAALKTASDFITKMDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQT------DG 404
Query: 359 RG-----KVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGAD 413
            G        A ++R   +   L  +  +  +     D TG  Q+WR+ G  KV +  A 
Sbjct: 405 LGLSYLSSHIANVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPAT 464
Query: 414 QTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQA 473
             + Y GD YI  Y+Y    ++  +I  W G QS +D+ A++  L +++ E +   PVQ+
Sbjct: 465 YGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQS 524
Query: 474 RIYEGHEPXXXXXXXXXXXVL--KGGLS-DGYKTYIAEKGIPDETYKEDGVALFRIQGSG 530
           R+ +G EP           ++  KGG S +G +T  A               LF+++ + 
Sbjct: 525 RVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQTAPAS------------TRLFQVRANS 572
Query: 531 PDNMQAIQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQ 590
               +A++V P A +LNS+  ++L   S  + W G   S   +   +  L +++      
Sbjct: 573 AGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLR------ 626
Query: 591 PNLQSKSQKEGAESEQFWELLEGKSEYPSQKIAREPESD---PHLFSCTFSKGHLKVSEI 647
              Q     EG+E + FWE L GK+ Y +    ++ + D   P LF+C+   G   + E+
Sbjct: 627 --AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEV 684
Query: 648 YN-FTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEV 706
                Q+DL T+D+ +LD   ++FVWVG+    + K  ALT  +++I  D    N     
Sbjct: 685 PGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETD--PANRDRRT 742
Query: 707 PIYIVLEGSEPPFFTRFFT-WD 727
           PI +V +G EPP F  +F  WD
Sbjct: 743 PITVVKQGFEPPSFVGWFLGWD 764
>pdb|1D0N|A Chain A, The Crystal Structure Of Calcium-Free Equine Plasma Gelsolin. Length = 729 Back     alignment and structure
>pdb|2FGH|A Chain A, Atp Bound Gelsolin Length = 731 Back     alignment and structure
>pdb|3FFK|A Chain A, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To Actin Length = 377 Back     alignment and structure
>pdb|3FFK|A Chain A, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To Actin Length = 377 Back     alignment and structure
>pdb|1RGI|G Chain G, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin Length = 346 Back     alignment and structure
>pdb|1RGI|G Chain G, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin Length = 346 Back     alignment and structure
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein (Cap G) With Actin-Severing Activity In The Ca2+-Free Form Length = 347 Back     alignment and structure
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein (Cap G) With Actin-Severing Activity In The Ca2+-Free Form Length = 347 Back     alignment and structure
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G Length = 347 Back     alignment and structure
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G Length = 347 Back     alignment and structure
>pdb|1NPH|A Chain A, Gelsolin Domains 4-6 In Active, Actin Free Conformation Identifies Sites Of Regulatory Calcium Ions Length = 329 Back     alignment and structure
>pdb|1P8X|A Chain A, The Calcium-activated C-terminal Half Of Gelsolin Length = 344 Back     alignment and structure
>pdb|1H1V|G Chain G, Gelsolin G4-G6ACTIN COMPLEX Length = 331 Back     alignment and structure
>pdb|3FG7|A Chain A, The Crystal Structure Of Villin Domain 6 Length = 398 Back     alignment and structure
>pdb|1T44|G Chain G, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 147 Back     alignment and structure
>pdb|1P8Z|G Chain G, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Residues Val26-Glu156 Length = 136 Back     alignment and structure
>pdb|1D4X|G Chain G, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 126 Back     alignment and structure
>pdb|2FF3|A Chain A, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif Hybrid In Complex With Actin Length = 150 Back     alignment and structure
>pdb|1YAG|G Chain G, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 125 Back     alignment and structure
>pdb|3CI5|G Chain G, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 126 Back     alignment and structure
>pdb|1EQY|S Chain S, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 125 Back     alignment and structure
>pdb|3CIP|G Chain G, Complex Of Dictyostelium Discoideum Actin With Gelsolin Length = 128 Back     alignment and structure
>pdb|1C0F|S Chain S, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 127 Back     alignment and structure
>pdb|3TU5|B Chain B, Actin Complex With Gelsolin Segment 1 Fused To Cobl Segment Length = 297 Back     alignment and structure
>pdb|2VIK|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t, Determined By Solution Nmr, Minimized Average Structure Length = 126 Back     alignment and structure
>pdb|2VIK|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t, Determined By Solution Nmr, Minimized Average Structure Length = 126 Back     alignment and structure
>pdb|3FG6|A Chain A, Structure Of The C-terminus Of Adseverin Length = 371 Back     alignment and structure
>pdb|2LLF|A Chain A, Sixth Gelsolin-like Domain Of Villin In 5 Mm Cacl2 Length = 107 Back     alignment and structure
>pdb|1KCQ|A Chain A, Human Gelsolin Domain 2 With A Cd2+ Bound Length = 104 Back     alignment and structure
>pdb|1SVY|A Chain A, Severin Domain 2, 1.75 Angstrom Crystal Structure Length = 114 Back     alignment and structure
>pdb|1SVQ|A Chain A, Structure Of Severin Domain 2 In Solution Length = 114 Back     alignment and structure
>pdb|1UJS|A Chain A, Solution Structure Of The Villin Headpiece Domain Of Human Actin-Binding Lim Protein Homologue (Kiaa0843 Protein) Length = 88 Back     alignment and structure
>pdb|2L3X|A Chain A, Villin Head Piece Domain Of Human Ablim2 Length = 67 Back     alignment and structure
>pdb|2RJV|A Chain A, Crystal Structure Of The H41y Mutant Of Villin Headpiece, P 21 21 21 Space Group Length = 67 Back     alignment and structure
>pdb|3MYC|A Chain A, Crystal Structure Of Hp67 H41f - P212121 Length = 67 Back     alignment and structure
>pdb|1YU5|X Chain X, Crystal Structure Of The Headpiece Domain Of Chicken Villin Length = 67 Back     alignment and structure
>pdb|1ZV6|A Chain A, Nmr Structure Of The Human Dematin Headpiece S74e Mutant Length = 68 Back     alignment and structure
>pdb|1YU8|X Chain X, Crystal Structure Of The R37a Mutant Of Villin Headpiece Length = 67 Back     alignment and structure
>pdb|1QZP|A Chain A, Nmr Structure Of The Human Dematin Headpiece Domain Length = 68 Back     alignment and structure
>pdb|3NKJ|A Chain A, Crystal Structure Of Hp67 L61g Length = 67 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query969
1d0n_A729 Horse plasma gelsolin; mixed alpha-beta structure, 0.0
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 1e-103
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 8e-51
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 2e-20
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 8e-11
3fg7_A398 Villin-1; actin binding protein, gelsolin, actin c 2e-93
3fg7_A398 Villin-1; actin binding protein, gelsolin, actin c 3e-70
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 6e-89
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 1e-63
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 2e-06
2fh1_A344 Gelsolin; calcium, contractIle protein; 1.55A {Hom 3e-86
2fh1_A344 Gelsolin; calcium, contractIle protein; 1.55A {Hom 1e-71
3cip_G128 Gelsolin; actin, dictyostelium discoideum, actin-a 2e-57
3cip_G128 Gelsolin; actin, dictyostelium discoideum, actin-a 3e-19
2ff3_A150 Gelsolin; protein-protein complex, structural prot 1e-55
2ff3_A150 Gelsolin; protein-protein complex, structural prot 1e-19
1t44_G147 Chimera of gelsolin domain 1 and C-terminal domain 1e-53
1t44_G147 Chimera of gelsolin domain 1 and C-terminal domain 1e-18
2vik_A126 Villin 14T; actin-binding protein, capping protein 2e-44
2vik_A126 Villin 14T; actin-binding protein, capping protein 3e-21
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 9e-37
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 3e-14
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 1e-07
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 3e-05
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 8e-35
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 3e-14
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 9e-11
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 1e-05
1qzp_A68 Dematin; villin headpiece, actin binding domain, p 2e-23
1yu8_X67 Villin; alpha helix, 3-10 helix, structural protei 2e-22
1ujs_A88 Actin-binding LIM protein homologue; VHP domain, s 4e-22
2k6m_S67 Supervillin; SVHP, HP, headpiece, archvillin, acti 7e-22
1und_A37 Advillin, P92; actin binding, F-actin binding, cyt 4e-14
1wy3_A35 Villin; structural protein; HET: NLE; 0.95A {Synth 8e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-09
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G* Length = 729 Back     alignment and structure
 Score =  613 bits (1580), Expect = 0.0
 Identities = 243/754 (32%), Positives = 378/754 (50%), Gaps = 46/754 (6%)

Query: 9   DSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYW 68
              F  AG++ G++IWR+E F  V VP + +G FFTGD+YVILKT   ++G L++D+HYW
Sbjct: 3   HPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYW 62

Query: 69  LGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASG 128
           LG + SQDE+G AAI TV+LD  L GRAVQ+REVQG E+  FL YFK  +  ++GG+ASG
Sbjct: 63  LGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASG 122

Query: 129 FKRAEAEEHKT-RLFVCRGKHVIHVKEVPFSRSSLNHDDIFILDTQSKIFQFNGSNSSIQ 187
           FK     E    RL   +G+ V+   EVP S  S N+ D FILD  + I+Q+ GS S+  
Sbjct: 123 FKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRF 182

Query: 188 ERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISEEN 247
           ER KA +V + I+D    G+ +V+V E+G      E        G    LP         
Sbjct: 183 ERLKATQVSKGIRDNERSGRAQVSVFEEGA-----EPEAMLQVLGPKPTLPEATE-DTVK 236

Query: 248 NNVVHSHSTKLYSVDKGQA-----VPVEGDSLTRDLLETNKCYILDCGIE--VFVWMGRN 300
            +  +    KLY V  G       +  + +   +  L +  C+ILD G +  +FVW G+ 
Sbjct: 237 EDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQ 296

Query: 301 TSLDERKSASGAAEELLKGSDRSKSHMI-RVIEGFETVMFKSKFDCWPQ-ETNVTVSEDG 358
            +++ERK+A   A + +   D  K   +  + EG ET +F+  F  W   +    +    
Sbjct: 297 ANMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAY 356

Query: 359 RGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGNLQVWRVNGQEKVLLSGADQTKLY 418
                A ++R   +   L  +  +  +     D TG  Q+WRV G  KV +  A   + Y
Sbjct: 357 LSSHIAHVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVDPATYGQFY 416

Query: 419 SGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARIYEG 478
            GD YI  Y+Y    ++  +I  W G QS +D+ A++  L +++ E +   PVQ+R+ +G
Sbjct: 417 GGDSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQG 476

Query: 479 HEPIQFFSIF--QSFIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQA 536
            EP    S+F  +  IV KGG S                       LF+++ S     +A
Sbjct: 477 KEPAHLMSLFGGKPMIVYKGGTSREGG-----------QTAPASTRLFQVRASSSGATRA 525

Query: 537 IQVEPVAASLNSSYCYILHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSK 596
           +++ P A +LNS+  ++L   S  + W G   S   +   +  L +++            
Sbjct: 526 VEIIPKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQELLRVLRAQPVQ------- 578

Query: 597 SQKEGAESEQFWELLEGKSEYPSQKIAREPESDPH---LFSCTFSKGHLKVSEIY-NFTQ 652
              EG+E + FWE L GK+ Y +    ++ + D H   LF+C+   G   + E+   F Q
Sbjct: 579 -VAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGEFMQ 637

Query: 653 DDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIYIVL 712
           +DL T+D+ +LD   ++FVWVG+    + K  ALT  +++I  D    +     PI +V 
Sbjct: 638 EDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDP--AHRDRRTPITVVK 695

Query: 713 EGSEPPFFTRFF-TWDSAKTNMHGNSFQRKLSIV 745
           +G EPP F  +F  WD +  ++  +   R L+ +
Sbjct: 696 QGFEPPSFVGWFLGWDDSYWSV--DPLDRALAEL 727
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Length = 347 Back     alignment and structure
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} Length = 398 Back     alignment and structure
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} Length = 398 Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Length = 371 Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Length = 371 Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Length = 371 Back     alignment and structure
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A Length = 344 Back     alignment and structure
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A Length = 344 Back     alignment and structure
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S* Length = 128 Back     alignment and structure
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S* Length = 128 Back     alignment and structure
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G* Length = 150 Back     alignment and structure
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G* Length = 150 Back     alignment and structure
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 Length = 147 Back     alignment and structure
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 Length = 147 Back     alignment and structure
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A Length = 126 Back     alignment and structure
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A Length = 126 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Length = 114 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Length = 104 Back     alignment and structure
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A Length = 68 Back     alignment and structure
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A Length = 67 Back     alignment and structure
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A Length = 88 Back     alignment and structure
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A Length = 67 Back     alignment and structure
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1 Length = 37 Back     alignment and structure
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B* Length = 35 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query969
1d0n_A729 Horse plasma gelsolin; mixed alpha-beta structure, 100.0
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 100.0
3fg7_A398 Villin-1; actin binding protein, gelsolin, actin c 100.0
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 100.0
2fh1_A344 Gelsolin; calcium, contractIle protein; 1.55A {Hom 100.0
3fg6_A371 Adseverin, scinderin; C-terminus of adseverin, act 100.0
1j72_A347 Macrophage capping protein; actin, human, CAP G, G 100.0
3fg7_A398 Villin-1; actin binding protein, gelsolin, actin c 100.0
2fh1_A344 Gelsolin; calcium, contractIle protein; 1.55A {Hom 100.0
1d0n_A 729 Horse plasma gelsolin; mixed alpha-beta structure, 100.0
3tu5_B297 Gelsolin, protein cordon-BLeu, thymosin beta-4; un 100.0
2ff3_A150 Gelsolin; protein-protein complex, structural prot 100.0
3cip_G128 Gelsolin; actin, dictyostelium discoideum, actin-a 100.0
1t44_G147 Chimera of gelsolin domain 1 and C-terminal domain 100.0
3tu5_B297 Gelsolin, protein cordon-BLeu, thymosin beta-4; un 100.0
2vik_A126 Villin 14T; actin-binding protein, capping protein 100.0
2vik_A126 Villin 14T; actin-binding protein, capping protein 100.0
3cip_G128 Gelsolin; actin, dictyostelium discoideum, actin-a 100.0
2ff3_A150 Gelsolin; protein-protein complex, structural prot 100.0
1t44_G147 Chimera of gelsolin domain 1 and C-terminal domain 100.0
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 99.94
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 99.92
1qzp_A68 Dematin; villin headpiece, actin binding domain, p 99.91
1yu8_X67 Villin; alpha helix, 3-10 helix, structural protei 99.9
2k6m_S67 Supervillin; SVHP, HP, headpiece, archvillin, acti 99.9
1ujs_A88 Actin-binding LIM protein homologue; VHP domain, s 99.9
1kcq_A104 Gelsolin, brevin, ADF, AGEL; alpha-beta structure, 99.88
1svq_A114 Severin; actin-binding; NMR {Dictyostelium discoid 99.87
1und_A37 Advillin, P92; actin binding, F-actin binding, cyt 99.7
1wy3_A35 Villin; structural protein; HET: NLE; 0.95A {Synth 99.65
1pcx_A810 Protein transport protein SEC24; 2.50A {Saccharomy 95.28
3eh2_A766 Protein transport protein SEC24C; copii-coat prote 95.03
3eh1_A751 Protein transport protein SEC24B; copii coat prote 94.9
3efo_B770 SEC24 related gene family, member D; copii, coat p 94.71
1m2v_B926 SEC24, protein transport protein SEC24, SEC24P, SE 94.35
3eh2_A766 Protein transport protein SEC24C; copii-coat prote 92.98
3efo_B770 SEC24 related gene family, member D; copii, coat p 91.81
1pcx_A810 Protein transport protein SEC24; 2.50A {Saccharomy 89.74
2nut_A769 Protein transport protein SEC23A; human copii SEC2 89.28
1m2v_B926 SEC24, protein transport protein SEC24, SEC24P, SE 88.2
2nut_A769 Protein transport protein SEC23A; human copii SEC2 87.66
1m2o_A768 SEC23, protein transport protein SEC23, SEC23P; zi 87.66
1m2o_A768 SEC23, protein transport protein SEC23, SEC23P; zi 86.26
3eh1_A751 Protein transport protein SEC24B; copii coat prote 83.62
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G* Back     alignment and structure
Probab=100.00  E-value=8.8e-169  Score=1539.59  Aligned_cols=709  Identities=34%  Similarity=0.603  Sum_probs=641.6

Q ss_pred             ccchhhhcCCccccEEEEEEECceeeecCCCCccceecCCEEEEEEeeecCCCCcceEEEEEecCCCChhhHhHHHHHHH
Q 037000            7 DLDSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTV   86 (969)
Q Consensus         7 ~~~~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~av   86 (969)
                      ++|++|+++|+++|++|||||+|+++|||++.||+||+||||||||||...++.+.|+||||+|++||+||+|+||++|+
T Consensus         1 ~~~~~f~~~g~~~g~~iWrIe~~~~~~v~~~~~G~Fy~gdsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tv   80 (729)
T 1d0n_A            1 VEHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTV   80 (729)
T ss_dssp             CCCTTGGGTTSSSEEEEEEECSSSEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred             CcchhhhhcccCCCeEEEEEcCCEEEeCChHhcCcccCCCEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHH
Confidence            36999999999999999999999999999999999999999999999987788899999999999999999999999999


Q ss_pred             HHHHHhCCCceEEEeeccCCcHhHHhccCCcEEEecCccCCCCcccccccc-ceEEEEEeecceEEEEEecCCCCCCCcC
Q 037000           87 ELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGFKRAEAEEH-KTRLFVCRGKHVIHVKEVPFSRSSLNHD  165 (969)
Q Consensus        87 eLd~~Lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~-~~rL~~vkGkr~v~~~eV~~s~sSLns~  165 (969)
                      |||++|||.||||||+|||||++||+||+++|+|++||++|||+|++++.+ .+|||||||+++++++|||++++|||++
T Consensus        81 eLd~~lgg~~vq~Re~Qg~Es~~Fl~~Fk~~i~~~~Gg~~sgf~~v~~~~~~~~rL~~vkG~~~v~~~eV~~s~~SLns~  160 (729)
T 1d0n_A           81 QLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNG  160 (729)
T ss_dssp             HHHHHTTSCCEEEEEETTCCCHHHHHTCSSCEEEESCCTTTTCCCCCCSSCCCCEEEEEECSSSCEEEEECSSGGGCCSS
T ss_pred             HHHHHcCCcceEEEEecCCCCHHHHHhccCCcEEeeCCcccCcccccccCCCCcEEEEEECCCcEEEEEEeccHHHcCCC
Confidence            999999999999999999999999999999999999999999999987764 6999999999999999999999999999


Q ss_pred             CcceeecCCeEEEEeCCCCCHHHHHHHHHHHHHhhcccCCCceeEEEeeCCccccccchhhHHHHcCCCCCCCCCCCcCc
Q 037000          166 DIFILDTQSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAVVEDGKLMADAEAGEFWGFFGGFAPLPRKMTISE  245 (969)
Q Consensus       166 DvFILd~~~~iyvW~G~~Sn~~Er~kA~~iA~~Ik~~~r~G~~~v~~VdeG~~~~~~e~~eFw~~lGg~~~~~~~~~~~~  245 (969)
                      ||||||+++.||+|+|++||..||.+|+++|+.|++++|+|+|+|++|+||.     |+.+||++|||..+++... ..+
T Consensus       161 DvFILd~g~~iy~W~G~~s~~~Er~kA~~~a~~i~~~er~g~~~i~~v~Eg~-----e~~eFw~~LGg~~~~~~~~-~~~  234 (729)
T 1d0n_A          161 DCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGA-----EPEAMLQVLGPKPTLPEAT-EDT  234 (729)
T ss_dssp             SEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHSGGGCSEEEEEETTC-----CCHHHHHHHCSCCCCCCCC-GGG
T ss_pred             CeEEEEcCCEEEEEECCCCCHHHHHHHHHHHHHHhhhhcCCCccEEEecCCC-----ChHHHHHHcCCCcccCCCC-cch
Confidence            9999999999999999999999999999999999988899999999999996     6789999999987665432 111


Q ss_pred             cccccccccceEEEEee--CCCcccccCC---CCcccccCCCcEEEEeCC-eE-EEEEecCCCCHHHHHHHHHHHHHHHh
Q 037000          246 ENNNVVHSHSTKLYSVD--KGQAVPVEGD---SLTRDLLETNKCYILDCG-IE-VFVWMGRNTSLDERKSASGAAEELLK  318 (969)
Q Consensus       246 ~~~~~~~~~~~rLy~v~--~G~l~~~e~~---~lsq~~L~~~~vyILD~g-~e-IyVW~Gk~as~~eR~~A~~~A~~~i~  318 (969)
                      ...+......+|||+|+  +|.+.+.++.   +|+|+||++++||||||| .+ ||||+|++|+..||+.||++|++|++
T Consensus       235 ~~~~~~~~~~~rLy~vs~~~G~l~~~ev~~~~~~~q~~L~~~dv~ILD~g~~~~ifVW~Gk~a~~~er~~A~~~A~~y~~  314 (729)
T 1d0n_A          235 VKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFIS  314 (729)
T ss_dssp             SCCCCCCCCCCEEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEECTTSCHHHHTTHHHHHHHHHH
T ss_pred             hhhhhccccCcEEEEEECCCCCEEEEEeccCCCCCHHHcCCCCEEEEecCCccEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence            01123345678999998  6888775543   999999999999999999 44 99999999999999999999999999


Q ss_pred             cCCCCC-ceEEEecCCccchhhhcccccCCcCCccc--cccCcchhhhhhhhhcccccccccccCCCcCCCcccccCCcc
Q 037000          319 GSDRSK-SHMIRVIEGFETVMFKSKFDCWPQETNVT--VSEDGRGKVAALLKRQGVNVKGLLKAEPVKEEPQAFIDCTGN  395 (969)
Q Consensus       319 ~~~rp~-t~i~~V~eG~Ep~~FK~~F~~W~~~~~~~--~~~~~~~kva~~~~~~~~dv~~l~~~~p~~~~~~~~~d~tg~  395 (969)
                      ..+||. |+|++|.||.||.+||++|.+|++...+.  +.....+++|. +++.++|+..|+...+..+...+++|++|+
T Consensus       315 ~~~~p~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~~~~~~~~~~~~~~~a~-~~~~~~d~~~l~~~p~~~~~~~~~d~g~g~  393 (729)
T 1d0n_A          315 KMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAYLSSHIAH-VERVPFDAATLHTSTAMAAQHGMDDDGTGQ  393 (729)
T ss_dssp             HTTCCTTCEEEEEETTCCCHHHHTTBTTCCCTTCSSSSSCSCCCGGGTT-CCCCCCCTTTGGGCHHHHHHHTCSSCSCSC
T ss_pred             hccCCCCCeEEEEeCCCCCHHHHHHHhcCCCcccccccccccccccccc-ccccccChHHhccCcccccccccccCCCCc
Confidence            999998 99999999999999999999999865432  12222234443 568899999986542233344567899999


Q ss_pred             EEEEEEeCCeeeecCCccccccccCcEEEEEeecCCCCCceEEEEEEcCCCCChhhHHHHHHHHHHHHHHcCCCCeEEEe
Q 037000          396 LQVWRVNGQEKVLLSGADQTKLYSGDCYIFQYSYPGDEKEEILIGTWFGKQSVEDDRASAISLASKMVESMKFLPVQARI  475 (969)
Q Consensus       396 l~VWrIe~~~~~~v~~~~~G~FysgdcYIVlytY~~~~~~~~~iy~W~G~~ss~de~~aaa~~a~~l~~~~~g~~vq~Rv  475 (969)
                      ++||||+++.+++||++.||+||+||||||||||..+++.+|+||||||++||++|+++||++|++||+.++|.|+|+||
T Consensus       394 l~vWrIe~~~~~~vp~~~~G~Fy~gd~Yivl~ty~~~g~~~~~iyfW~G~~ss~de~g~aa~~~veLd~~lgg~~vq~R~  473 (729)
T 1d0n_A          394 KQIWRVEGSNKVPVDPATYGQFYGGDSYIILYNYRHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRV  473 (729)
T ss_dssp             EEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEEETTEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTSCSEEEEE
T ss_pred             EEEEEEeCCEEEECChhhccEEcCCcEEEEEEEEecCCCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCceEEec
Confidence            99999999999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             eccCCChHHHhhcC-c-EEEEeCcccCCccccccccCCCCCcccCCceEEEEEEecCCCCeEEEEeccCcCCCCCCCeEE
Q 037000          476 YEGHEPIQFFSIFQ-S-FIVLKGGLSDGYKTYIAEKGIPDETYKEDGVALFRIQGSGPDNMQAIQVEPVAASLNSSYCYI  553 (969)
Q Consensus       476 ~QGkEp~~Fl~lF~-~-~ii~~Gg~~s~f~~~~~~~~~~~~~~~~~~~~Lf~V~G~~~~~~~a~eV~~~~ssLnS~d~FI  553 (969)
                      +||+||+|||+||+ + |+|++||+++.        +.   .++...+|||||+|+.+.+++++||++.++||||+||||
T Consensus       474 ~Qg~E~~~Fl~~F~g~~~ii~~Gg~~~~--------~~---~~~~~~~rLf~vrg~~~~~~~~~eV~~~~ssLns~d~fI  542 (729)
T 1d0n_A          474 VQGKEPAHLMSLFGGKPMIVYKGGTSRE--------GG---QTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFV  542 (729)
T ss_dssp             ETTCCCHHHHTTSTTSCEEEESSCCCSS--------CC---CCCCCSSEEEEEEECTTSCEEEEEECCCGGGCCSSSEEE
T ss_pred             ccCCCCHHHHHhcCCCeEEEEeCCcccc--------Cc---cCCCCCCEEEEEECCCCCceEEEEecCChhhcCcCCeEE
Confidence            99999999999998 5 89999998752        11   123346899999999888999999999999999999999


Q ss_pred             EecCCeEEEEECCCCCHHHHHHHHHHHHHhhccCCCCCCcceEeeccCCChhHHHHhcCCCCCCCCcccc-CCC--CCCC
Q 037000          554 LHNDSTVFTWSGNLTSSENQELVERQLDLIKLNDFVQPNLQSKSQKEGAESEQFWELLEGKSEYPSQKIA-REP--ESDP  630 (969)
Q Consensus       554 L~~~~~vylW~Gk~ss~~er~~A~~va~~l~~~~~~~~~~~~~~v~EG~E~~~FW~~LGgk~~y~~~~~~-~~~--~~~p  630 (969)
                      |+++++||+|+|++|+.+||++|+.+|+.|.      +.  +++|+||+||++||.+|||+.+|++.... .+.  ...|
T Consensus       543 L~~~~~iyvW~G~~s~~~er~~A~~~a~~l~------~~--~~~v~EG~E~~~FW~~LGg~~~y~~~~~~~~~~~~~~~~  614 (729)
T 1d0n_A          543 LKTPSAAYLWVGAGASEAEKTGAQELLRVLR------AQ--PVQVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPP  614 (729)
T ss_dssp             EECSSCCBCEECTTCCHHHHHHHHHHHHHHT------CC--CCCEETTCCCHHHHHTTTSCCCCCCCCCCSTTHHHHSCC
T ss_pred             EecCCeEEEEECCCCCHHHHHHHHHHHHHhc------cC--cEEEeCCCChHHHHHhcCCCCccCcccccccccccccCC
Confidence            9999999999999999999999999999997      22  67899999999999999999999987654 221  4789


Q ss_pred             eeEEEEeccCeeEEeccc-cccccCCCCCCeEEEecCCeEEEEEcCCCCHHHHHHHHHHHHHHhhccccCCCCCCCCcEE
Q 037000          631 HLFSCTFSKGHLKVSEIY-NFTQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMHALTIGEKFIGHDFLLENLPHEVPIY  709 (969)
Q Consensus       631 rLF~~s~~~G~~~v~Ei~-~F~QdDL~~ddv~iLD~~~eIfVWiG~~as~~ek~~Al~~A~~Yl~~~~~~~~r~~~tpI~  709 (969)
                      |||+||+++|+|.++||. +|+|+||+++|||||||+++||||||++|+..||+.||.+|++||++++.  +|++.+||+
T Consensus       615 rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvWiG~~a~~~er~~al~~A~~Y~~~~~~--~r~~~~pi~  692 (729)
T 1d0n_A          615 RLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEALTSAKRYIDTDPA--HRDRRTPIT  692 (729)
T ss_dssp             EEEEEECTTTCCEEEECCSSCCGGGCCTTSEEEEECSSCEEEEECTTSCHHHHSSHHHHHHHHHHHCTT--CCCTTCCEE
T ss_pred             eEEEEEcCCCcEEEEEecCcccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--cCCCCCcEE
Confidence            999999999999999999 99999999999999999999999999999999999999999999999775  688889999


Q ss_pred             EecCCCCCcccccccc-ccccccccCCchHHHHHHHh
Q 037000          710 IVLEGSEPPFFTRFFT-WDSAKTNMHGNSFQRKLSIV  745 (969)
Q Consensus       710 vV~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~  745 (969)
                      +|.+|.||+.||++|+ ||+.+|.  +++|+++.++|
T Consensus       693 ~V~~G~Ep~~F~~~F~~Wd~~~~~--~~~~~~~~~~~  727 (729)
T 1d0n_A          693 VVKQGFEPPSFVGWFLGWDDSYWS--VDPLDRALAEL  727 (729)
T ss_dssp             EEETTCCCHHHHTTCTTCCGGGGT--SCHHHHHHHHH
T ss_pred             EEeCCCCCHHHHhhhhhcCccccC--CccHHHHHHhh
Confidence            9999999999999999 9999985  57799988776
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Back     alignment and structure
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Back     alignment and structure
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A Back     alignment and structure
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens} Back     alignment and structure
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A Back     alignment and structure
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A Back     alignment and structure
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A Back     alignment and structure
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G* Back     alignment and structure
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens} Back     alignment and structure
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G* Back     alignment and structure
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S* Back     alignment and structure
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 Back     alignment and structure
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens} Back     alignment and structure
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A Back     alignment and structure
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A Back     alignment and structure
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S* Back     alignment and structure
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G* Back     alignment and structure
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Back     alignment and structure
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A Back     alignment and structure
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A Back     alignment and structure
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A Back     alignment and structure
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A Back     alignment and structure
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1 Back     alignment and structure
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A Back     alignment and structure
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1 Back     alignment and structure
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B* Back     alignment and structure
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A Back     alignment and structure
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens} Back     alignment and structure
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B Back     alignment and structure
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B Back     alignment and structure
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Back     alignment and structure
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens} Back     alignment and structure
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B Back     alignment and structure
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A Back     alignment and structure
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A Back     alignment and structure
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Back     alignment and structure
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A Back     alignment and structure
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A* Back     alignment and structure
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A* Back     alignment and structure
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 969
d3cipg1124 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) 2e-54
d3cipg1124 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) 5e-26
d1j72a1114 d.109.1.1 (A:11-124) Macrophage capping protein Ca 6e-51
d1j72a1114 d.109.1.1 (A:11-124) Macrophage capping protein Ca 2e-26
d1j72a1114 d.109.1.1 (A:11-124) Macrophage capping protein Ca 0.003
d2vika_126 d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chic 6e-46
d2vika_126 d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chic 7e-27
d2fh1a1121 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapien 4e-44
d2fh1a1121 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapien 1e-28
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 3e-31
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 8e-19
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 3e-15
d1svya_102 d.109.1.1 (A:) Severin, domain 2 {Dictyostelium di 8e-12
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 5e-30
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 2e-16
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 7e-15
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 1e-11
d1kcqa_104 d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [Tax 0.002
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 2e-29
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 9e-16
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 4e-15
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 5e-12
d1j72a2116 d.109.1.1 (A:125-240) Macrophage capping protein C 2e-04
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 6e-26
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 3e-17
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 9e-15
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 4e-04
d2fh1a3113 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapien 0.001
d1yu5x167 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) 6e-24
d1qzpa_68 a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId 2e-23
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 2e-22
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 3e-19
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 9e-12
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 6e-11
d2fh1a296 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapien 0.001
d1ujsa_88 a.14.1.1 (A:) Actin-binding LIM protein homologue 9e-22
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 3e-21
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 6e-18
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 1e-16
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 1e-12
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 2e-06
d1d0na3121 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus cabal 3e-04
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 2e-19
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 1e-16
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 7e-15
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 2e-13
d1j72a3107 d.109.1.1 (A:241-347) Macrophage capping protein C 2e-10
d1unda_36 a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxI 7e-14
d1yu8x135 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) 1e-12
d1pd0a4173 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccha 7e-04
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Gelsolin-like
domain: Gelsolin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 2e-54
 Identities = 67/120 (55%), Positives = 89/120 (74%)

Query: 10  SAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWL 69
             F  AG++ G++IWR+E F  V VP + +G FFTGD+YVILKT   ++G L++D+HYWL
Sbjct: 5   PEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWL 64

Query: 70  GKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF 129
           G + SQDE+G AAI TV+LD  L GRAVQ+REVQG E+  FL YFK  +  ++GG+ASGF
Sbjct: 65  GNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF 124
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 114 Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Length = 126 Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Length = 126 Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 121 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Length = 102 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 67 Back     information, alignment and structure
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]} Length = 68 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Length = 96 Back     information, alignment and structure
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Length = 121 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Length = 107 Back     information, alignment and structure
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]} Length = 36 Back     information, alignment and structure
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 35 Back     information, alignment and structure
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 173 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query969
d3cipg1124 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1j72a1114 Macrophage capping protein Cap G {Human (Homo sapi 100.0
d2vika_126 Villin, domain 1 (res. 1-126) {Chicken (Gallus gal 100.0
d2fh1a1121 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cipg1124 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2vika_126 Villin, domain 1 (res. 1-126) {Chicken (Gallus gal 100.0
d1j72a1114 Macrophage capping protein Cap G {Human (Homo sapi 100.0
d2fh1a1121 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2fh1a3113 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.93
d1qzpa_68 Dematin {Human (Homo sapiens) [TaxId: 9606]} 99.92
d1yu5x167 Villin {Chicken (Gallus gallus) [TaxId: 9031]} 99.91
d2fh1a296 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.91
d1ujsa_88 Actin-binding LIM protein homologue KIAA0843 {Huma 99.9
d1j72a2116 Macrophage capping protein Cap G {Human (Homo sapi 99.9
d1kcqa_104 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1svya_102 Severin, domain 2 {Dictyostelium discoideum [TaxId 99.87
d1d0na3121 Gelsolin {Horse (Equus caballus) [TaxId: 9796]} 99.87
d1j72a3107 Macrophage capping protein Cap G {Human (Homo sapi 99.87
d2fh1a3113 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d2fh1a296 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.85
d1d0na3121 Gelsolin {Horse (Equus caballus) [TaxId: 9796]} 99.83
d1svya_102 Severin, domain 2 {Dictyostelium discoideum [TaxId 99.83
d1j72a3107 Macrophage capping protein Cap G {Human (Homo sapi 99.82
d1j72a2116 Macrophage capping protein Cap G {Human (Homo sapi 99.82
d1kcqa_104 Gelsolin {Human (Homo sapiens) [TaxId: 9606]} 99.81
d1unda_36 Advillin {Human (Homo sapiens) [TaxId: 9606]} 99.71
d1yu8x135 Villin {Chicken (Gallus gallus) [TaxId: 9031]} 99.68
d1pd0a4173 Sec24 {Baker's yeast (Saccharomyces cerevisiae) [T 97.12
d1pd0a4173 Sec24 {Baker's yeast (Saccharomyces cerevisiae) [T 95.53
d2qtva4142 Sec23 {Baker's yeast (Saccharomyces cerevisiae) [T 88.05
d2qtva4142 Sec23 {Baker's yeast (Saccharomyces cerevisiae) [T 84.07
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Gelsolin-like
domain: Gelsolin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-41  Score=319.48  Aligned_cols=121  Identities=55%  Similarity=0.950  Sum_probs=118.7

Q ss_pred             chhhhcCCccccEEEEEEECceeeecCCCCccceecCCEEEEEEeeecCCCCcceEEEEEecCCCChhhHhHHHHHHHHH
Q 037000            9 DSAFQGAGQKAGIEIWRIENFKPVLVPKSSHGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVEL   88 (969)
Q Consensus         9 ~~~f~~~g~~~gl~IWrIe~~~~v~vp~~~~G~Fy~gd~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveL   88 (969)
                      .|+|.++|++|||+||||+++++++||++.||+||+||||||||||..+++..+++||||+|++||++++++||++|++|
T Consensus         4 ~p~~~~~g~~~Gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIil~ty~~~~g~~~~~iy~W~G~~ss~~e~~~aa~~aveL   83 (124)
T d3cipg1           4 HPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQL   83 (124)
T ss_dssp             CHHHHHTTSSSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             chhhhcCCCCCceEEEEEeCCEEEECCHHHccEEeCCCEEEEEEEEEcCCCCEeEEEEEEECCCCChhHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999998788899999999999999999999999999999


Q ss_pred             HHHhCCCceEEEeeccCCcHhHHhccCCcEEEecCccCCCC
Q 037000           89 DAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGIASGF  129 (969)
Q Consensus        89 d~~Lgg~~vq~Re~QG~Es~~Fls~Fk~~ii~~~Gg~~sgf  129 (969)
                      |++|+|.++|+||+||+||++||+||+++|+|++||++|||
T Consensus        84 d~~l~g~~vq~R~~Qg~Ep~~Fl~lF~~~~ii~~GG~~sgf  124 (124)
T d3cipg1          84 DDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF  124 (124)
T ss_dssp             HHHTTTCEEEEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred             HHHcCCCccEEEEecCCCCHHHHHHhCCCeEEeeCCcccCC
Confidence            99999999999999999999999999999999999999997
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3cipg1 d.109.1.1 (G:2-125) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vika_ d.109.1.1 (A:) Villin, domain 1 (res. 1-126) {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1j72a1 d.109.1.1 (A:11-124) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a1 d.109.1.1 (A:412-532) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure