Citrus Sinensis ID: 037048

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKWVSAHSRGLGGEIQ
cccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEcccccccccccccccHHHccHHHHccccccccccHHHHHHHHHHccccccccHHHccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccc
ccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHcccccHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccHHHccccHHHHHHHHHccHHHHHHHHHHHHHHccccccEEEEccccccc
gcdasvllddaatftgektalpdfnsgrgfevIDTIKcqlesscpasvvkqlggpswrvqlgrrdsttasldlansdlpgpdmsLGELITAFADTGLTAEEMAALSGartigqaptdidplyevsLREKKYASGVSVLVTtpisfdndYYKSLRGLLisdfrggstasqpsanayspAAEFFLRDLAFSLLQRSkwvsahsrglggeiq
gcdasvllddaatftgektalpdfnsgRGFEVIDTIKCQLESSCPASVVKqlggpswrvqlgrRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSgartigqaptdIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSkwvsahsrglggeiq
GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKWVSAHSRGLGGEIQ
*******LDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQL***********************LGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFR************YSPAAEFFLRDLAFSLLQRSKWVS***********
GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKWVSAHSRGLGGEIQ
GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRG**********AYSPAAEFFLRDLAFSLLQRSKWVS***********
*C***VLLDDAATFTGEKTA***FNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKWVSAHSRGL*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQAPTDIDPLYEVSLREKKYASGVSVLVTTPISFDNDYYKSLRGLLISDFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKWVSAHSRGLGGEIQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query209 2.2.26 [Sep-21-2011]
P22195316 Cationic peroxidase 1 OS= N/A no 0.909 0.601 0.497 7e-43
A5H452321 Peroxidase 70 OS=Zea mays N/A no 0.909 0.591 0.436 9e-37
P00434296 Peroxidase P7 OS=Brassica N/A no 0.904 0.638 0.417 1e-36
Q9FLC0324 Peroxidase 52 OS=Arabidop yes no 0.803 0.518 0.448 3e-36
A7NY33321 Peroxidase 4 OS=Vitis vin no no 0.909 0.591 0.432 1e-35
Q02200322 Lignin-forming anionic pe N/A no 0.909 0.590 0.421 1e-34
Q9LVL1325 Peroxidase 68 OS=Arabidop no no 0.909 0.584 0.421 5e-32
Q9LVL2316 Peroxidase 67 OS=Arabidop no no 0.909 0.601 0.408 3e-31
A2YPX3314 Peroxidase 2 OS=Oryza sat N/A no 0.770 0.512 0.448 1e-29
Q0D3N0314 Peroxidase 2 OS=Oryza sat no no 0.770 0.512 0.448 1e-29
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function desciption
 Score =  173 bits (439), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/227 (49%), Positives = 132/227 (58%), Gaps = 37/227 (16%)

Query: 1   GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
           GCDASVLLDD + FTGEKTA P+ NS RGFEVIDTIK Q+ES CP  V            
Sbjct: 70  GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARD 129

Query: 49  -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
            V  LGG SW V LGRRDSTTASL  ANSDLP P  +L  LI+AF++ G T +E+  LSG
Sbjct: 130 SVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 189

Query: 108 ARTIGQA-----------PTDIDPLYEVSLREKKYASGVSVL-----VTTPISFDNDYYK 151
           A TIGQA            ++IDP Y  SL+    + G         VTTP  FDN YY 
Sbjct: 190 AHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYI 249

Query: 152 SLR---GLLISD---FRGGSTASQPSANAYSPAAEFFLRDLAFSLLQ 192
           +LR   GLL SD   F G ST SQ +  AYS  A  F  D   ++++
Sbjct: 250 NLRNKKGLLHSDQQLFNGVSTDSQVT--AYSNNAATFNTDFGNAMIK 294
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arachis hypogaea (taxid: 3818)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|A5H452|PER70_MAIZE Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1 Back     alignment and function description
>sp|P00434|PERP7_BRARA Peroxidase P7 OS=Brassica rapa PE=1 SV=3 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description
>sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1 Back     alignment and function description
>sp|Q9LVL2|PER67_ARATH Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1 Back     alignment and function description
>sp|A2YPX3|PER2_ORYSI Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2 Back     alignment and function description
>sp|Q0D3N0|PER2_ORYSJ Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
577503 320 cationic peroxidase [Stylosanthes humili 0.909 0.593 0.513 8e-45
211906538 323 class III peroxidase [Gossypium hirsutum 0.909 0.588 0.502 3e-44
224124728302 predicted protein [Populus trichocarpa] 0.909 0.629 0.493 1e-43
369794110256 putative class III peroxidase [Coffea ar 0.909 0.742 0.493 1e-43
297735572263 unnamed protein product [Vitis vinifera] 0.909 0.722 0.484 2e-43
359481251 376 PREDICTED: cationic peroxidase 1-like [V 0.909 0.505 0.484 4e-43
269856432 321 peroxidase protein [Mikania micrantha] 0.923 0.601 0.482 1e-41
359481249276 PREDICTED: cationic peroxidase 1-like [V 0.909 0.688 0.475 1e-41
302142016 446 unnamed protein product [Vitis vinifera] 0.909 0.426 0.477 2e-41
1633130294 Chain A, Peanut Peroxidase gi|1633131|pd 0.909 0.646 0.497 2e-41
>gi|577503|gb|AAB02554.1| cationic peroxidase [Stylosanthes humilis] Back     alignment and taxonomy information
 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/228 (51%), Positives = 138/228 (60%), Gaps = 38/228 (16%)

Query: 1   GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
           GCDASVLLDD +TFTGEKTA P+ NS RGF+VIDTIK Q+ES CP  V            
Sbjct: 73  GCDASVLLDDTSTFTGEKTAFPNVNSARGFDVIDTIKSQVESLCPGVVSCADILALAARD 132

Query: 49  -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
            V  LGGPSW VQLGRRDSTTASL+ ANSDLPGP  +L  LI+AF+  G TA+E+  LSG
Sbjct: 133 SVVALGGPSWNVQLGRRDSTTASLNSANSDLPGPSFNLSGLISAFSKKGFTAKELVTLSG 192

Query: 108 ARTIGQA-----------PTDIDPLYEVSLR-EKKYASGVSVL----VTTPISFDNDYY- 150
           A TIGQA            ++IDP Y  SL+       G S L    VTTP  FDN YY 
Sbjct: 193 AHTIGQARCTTFRTRIYNESNIDPSYAKSLQGNCPSVGGDSNLSPFDVTTPNKFDNAYYI 252

Query: 151 --KSLRGLLISDFR----GGSTASQPSANAYSPAAEFFLRDLAFSLLQ 192
             K+ +GLL +D +    GGST SQ    AYS  A  F  D   ++++
Sbjct: 253 NLKNKKGLLHADQQLFNGGGSTDSQ--VTAYSNNAATFNTDFGNAMIK 298

Source: Stylosanthes humilis

Species: Stylosanthes humilis

Genus: Stylosanthes

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|211906538|gb|ACJ11762.1| class III peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224124728|ref|XP_002319407.1| predicted protein [Populus trichocarpa] gi|222857783|gb|EEE95330.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|369794110|gb|AEX20390.1| putative class III peroxidase [Coffea arabica x Coffea canephora] Back     alignment and taxonomy information
>gi|297735572|emb|CBI18066.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359481251|ref|XP_002268259.2| PREDICTED: cationic peroxidase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|269856432|gb|ACZ51443.1| peroxidase protein [Mikania micrantha] Back     alignment and taxonomy information
>gi|359481249|ref|XP_002266365.2| PREDICTED: cationic peroxidase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142016|emb|CBI19219.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|1633130|pdb|1SCH|A Chain A, Peanut Peroxidase gi|1633131|pdb|1SCH|B Chain B, Peanut Peroxidase Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2153529324 PRX52 "peroxidase 52" [Arabido 0.545 0.351 0.503 1.9e-35
TAIR|locus:2161193325 AT5G58400 [Arabidopsis thalian 0.545 0.350 0.523 5.5e-32
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.631 0.417 0.472 1.3e-30
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.545 0.329 0.496 2.6e-30
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.598 0.389 0.453 5.3e-30
TAIR|locus:2057180349 AT2G38380 [Arabidopsis thalian 0.545 0.326 0.476 3.7e-29
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.545 0.340 0.480 1.2e-28
TAIR|locus:2101298354 PRXCA "peroxidase CA" [Arabido 0.598 0.353 0.460 4.1e-28
UNIPROTKB|Q9LEH3327 pod "Peroxidase 15" [Ipomoea b 0.545 0.348 0.453 6.6e-28
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.545 0.326 0.476 1.1e-27
TAIR|locus:2153529 PRX52 "peroxidase 52" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 308 (113.5 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
 Identities = 64/127 (50%), Positives = 84/127 (66%)

Query:     1 GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
             GCD S+LLDD ++FTGE+ A P+ NS RGF VID IK  +E +CP  V            
Sbjct:    76 GCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARD 135

Query:    49 -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
              V  LGGP+W V++GRRD+ TAS   ANS++P P  SL +LI++F+  GL+  +M ALSG
Sbjct:   136 SVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSG 195

Query:   108 ARTIGQA 114
             A TIGQ+
Sbjct:   196 AHTIGQS 202
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005829 "cytosol" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2161193 AT5G58400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057180 AT2G38380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101298 PRXCA "peroxidase CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9LEH3 pod "Peroxidase 15" [Ipomoea batatas (taxid:4120)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIII.180.1
hypothetical protein (302 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 2e-57
pfam00141180 pfam00141, peroxidase, Peroxidase 3e-33
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-18
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 5e-13
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 2e-07
cd00692328 cd00692, ligninase, Ligninase and other manganese- 1e-05
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 0.001
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  182 bits (465), Expect = 2e-57
 Identities = 93/233 (39%), Positives = 116/233 (49%), Gaps = 48/233 (20%)

Query: 1   GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
           GCDASVLLD  A  T EK A P+  S RGF+VID IK  LE++CP  V            
Sbjct: 48  GCDASVLLDSTANNTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARD 106

Query: 49  -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
            V   GGPS+ V LGRRD   +S +    +LP P  S+ +LI+ FA  GLT  ++ ALSG
Sbjct: 107 AVVLAGGPSYEVPLGRRDGRVSSANDVG-NLPSPFFSVSQLISLFASKGLTVTDLVALSG 165

Query: 108 ARTIGQA-------------------PTDIDPLYEVSLREK-KYASGVSVLV----TTPI 143
           A TIG+A                   PT +DP Y   LR+K         LV     TP 
Sbjct: 166 AHTIGRAHCSSFSDRLYNFSGTGDPDPT-LDPAYAAQLRKKCPAGGDDDTLVPLDPGTPN 224

Query: 144 SFDNDYYKSL---RGLLISD---FRGGSTASQPSANAYSPAAEFFLRDLAFSL 190
           +FDN YYK+L   RGLL SD        T +  +  A +  A  F RD A ++
Sbjct: 225 TFDNSYYKNLLAGRGLLTSDQALLSDPRTRAIVNRYAANQDA--FFRDFAAAM 275

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 99.98
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.93
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.87
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.86
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.82
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 97.32
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-66  Score=457.93  Aligned_cols=200  Identities=35%  Similarity=0.538  Sum_probs=185.0

Q ss_pred             CCceeEEccCCCCCccccccCCCCCCchhHHHHHHHHHHhhhhCCCce-------------EEccCCCceeccCCCcCCC
Q 037048            1 GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV-------------VKQLGGPSWRVQLGRRDST   67 (209)
Q Consensus         1 GCDaSill~~~~~~~~E~~~~~N~~~l~g~dvI~~iK~~le~~cpg~V-------------v~~~GGP~~~v~~GR~D~~   67 (209)
                      ||||||||+++   ..||++++|. ++||||+|+.||++||+.|||+|             |+++|||.|+|++||||++
T Consensus        71 GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~  146 (324)
T PLN03030         71 GCDASILIDGS---NTEKTALPNL-LLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGR  146 (324)
T ss_pred             CCceEEeeCCC---cccccCCCCc-CcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCC
Confidence            89999999964   3699999998 99999999999999999999998             8999999999999999999


Q ss_pred             CcccccccCCCCCCCCCHHHHHHHHHHcCCCHHHHHHHhcccccCCC-------------------CCCCCHHHHHHHhh
Q 037048           68 TASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQA-------------------PTDIDPLYEVSLRE  128 (209)
Q Consensus        68 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~dlVaLsGaHtiG~~-------------------d~~~~~~~~~~l~~  128 (209)
                      +|...+++ +||.|+.++++|++.|++|||+.+|||+||||||||++                   ||+|+|.|+.+|+.
T Consensus       147 ~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~  225 (324)
T PLN03030        147 VSLASDAS-NLPGFTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQA  225 (324)
T ss_pred             CCCccccc-CCcCCCCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhc
Confidence            99887775 89999999999999999999999999999999999995                   67899999999999


Q ss_pred             cCCC-CCCC---Cc-cccCcccChHHHHHh---hhccccC---CCCCCCCchHHHhhccccH----HHHHHHHHHHHHHh
Q 037048          129 KKYA-SGVS---VL-VTTPISFDNDYYKSL---RGLLISD---FRGGSTASQPSANAYSPAA----EFFLRDLAFSLLQR  193 (209)
Q Consensus       129 ~cp~-~~~~---~~-~~tp~~FDn~Yy~~l---~glL~SD---~~d~~t~~~~~V~~ya~~~----~~F~~~Fa~Am~Km  193 (209)
                      .||. +...   .+ ..||.+|||+||+||   +|||+||   +.|++|++  +|++||.|+    .+||++|++||+||
T Consensus       226 ~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~--~V~~~A~~~~~~~~~F~~~Fa~AmvKM  303 (324)
T PLN03030        226 LCPQNGDGSRRIALDTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRT--FVQRFLGVRGLAGLNFNVEFGRSMVKM  303 (324)
T ss_pred             cCCCCCCCCccccCCCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHH--HHHHHhcccccchhhhHHHHHHHHHHH
Confidence            9995 2221   23 579999999999999   8999999   68999999  999999875    59999999999999


Q ss_pred             hcCccCCCCCCCCccC
Q 037048          194 SKWVSAHSRGLGGEIQ  209 (209)
Q Consensus       194 ~~i~v~~~tg~~GeIR  209 (209)
                      |+|+|+  ||++||||
T Consensus       304 g~i~Vl--TG~~GEIR  317 (324)
T PLN03030        304 SNIGVK--TGTNGEIR  317 (324)
T ss_pred             ccCCCC--CCCCCcee
Confidence            999999  99999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
1sch_A294 Peanut Peroxidase Length = 294 4e-44
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 5e-29
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 4e-28
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 7e-28
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 1e-27
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-27
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-27
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 3e-27
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-27
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 3e-27
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 3e-27
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 3e-27
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 5e-27
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 8e-27
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-26
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 4e-26
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 1e-23
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 2e-22
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-15
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 9e-05
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/227 (49%), Positives = 132/227 (58%), Gaps = 37/227 (16%)
Query: 1   GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
           GCDASVLLDD + FTGEKTA P+ NS RGFEVIDTIK Q+ES CP  V            
Sbjct: 48  GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARD 107
Query: 49  -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
            V  LGG SW V LGRRDSTTASL  ANSDLP P  +L  LI+AF++ G T +E+  LSG
Sbjct: 108 SVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 167
Query: 108 ARTIGQA-----------PTDIDPLYEVSLREKKYASGVSVL-----VTTPISFDNDYYK 151
           A TIGQA            ++IDP Y  SL+    + G         VTTP  FDN YY 
Sbjct: 168 AHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYI 227
Query: 152 SLR---GLLISD---FRGGSTASQPSANAYSPAAEFFLRDLAFSLLQ 192
           +LR   GLL SD   F G ST SQ +  AYS  A  F  D   ++++
Sbjct: 228 NLRNKKGLLHSDQQLFNGVSTDSQVT--AYSNNAATFNTDFGNAMIK 272
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 8e-73
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 3e-70
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 3e-69
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 2e-68
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-67
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 2e-67
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 4e-62
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-36
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-26
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 9e-26
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 7e-25
2e39_A344 Peroxidase; heme protein, coordination geometry of 2e-24
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 7e-24
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 6e-22
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 9e-09
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-08
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  221 bits (565), Expect = 8e-73
 Identities = 110/224 (49%), Positives = 129/224 (57%), Gaps = 37/224 (16%)

Query: 1   GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
           GCDASVLLDD + FTGEKTA P+ NS RGFEVIDTIK Q+ES CP  V            
Sbjct: 48  GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARD 107

Query: 49  -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
            V  LGG SW V LGRRDSTTASL  ANSDLP P  +L  LI+AF++ G T +E+  LSG
Sbjct: 108 SVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 167

Query: 108 ARTIGQA-----------PTDIDPLYEVSLREK-KYASGVSVLV----TTPISFDNDYYK 151
           A TIGQA            ++IDP Y  SL+       G + L     TTP  FDN YY 
Sbjct: 168 AHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYI 227

Query: 152 SL---RGLLISD---FRGGSTASQPSANAYSPAAEFFLRDLAFS 189
           +L   +GLL SD   F G ST SQ +A + + A   F  D   +
Sbjct: 228 NLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAAT--FNTDFGNA 269
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=6.3e-71  Score=483.43  Aligned_cols=205  Identities=38%  Similarity=0.582  Sum_probs=193.0

Q ss_pred             CCceeEEccCCCCCccccccCCCCCCchhHHHHHHHHHHhhhhCCCce-------------EEccCCCceeccCCCcCCC
Q 037048            1 GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV-------------VKQLGGPSWRVQLGRRDST   67 (209)
Q Consensus         1 GCDaSill~~~~~~~~E~~~~~N~~~l~g~dvI~~iK~~le~~cpg~V-------------v~~~GGP~~~v~~GR~D~~   67 (209)
                      ||||||||++++++.+||++++|.+++||||+||.||++||+.||++|             |+++|||.|+|++||+|++
T Consensus        48 GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~  127 (304)
T 3hdl_A           48 GCDASVLLDSTANNTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGT  127 (304)
T ss_dssp             SSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCS
T ss_pred             CCCeeeeecCCCCCcccccCCCcccchHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCC
Confidence            899999999988888999999998889999999999999999999998             8899999999999999999


Q ss_pred             CcccccccCCCCCCCCCHHHHHHHHHHcCCCHHHHHHHhcccccCCC------------------CCCCCHHHHHHHhhc
Q 037048           68 TASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQA------------------PTDIDPLYEVSLREK  129 (209)
Q Consensus        68 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~dlVaLsGaHtiG~~------------------d~~~~~~~~~~l~~~  129 (209)
                      +++...++.+||.|+.++++|++.|++|||+.+||||||||||||++                  ||+|++.|+.+|+..
T Consensus       128 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~  207 (304)
T 3hdl_A          128 VSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNT  207 (304)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHH
T ss_pred             CCCccccccCCCCCCCCHHHHHHHHHHcCCCHHHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhcc
Confidence            99988888899999999999999999999999999999999999986                  689999999999999


Q ss_pred             CCC-CC--CCC---c-cccCcccChHHHHHh---hhccccC---CCCCCCCchHHHhhccccHHHHHHHHHHHHHHhhcC
Q 037048          130 KYA-SG--VSV---L-VTTPISFDNDYYKSL---RGLLISD---FRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKW  196 (209)
Q Consensus       130 cp~-~~--~~~---~-~~tp~~FDn~Yy~~l---~glL~SD---~~d~~t~~~~~V~~ya~~~~~F~~~Fa~Am~Km~~i  196 (209)
                      ||. ++  +.+   + ..||.+|||+||+||   +|||+||   +.|++|+.  +|+.||.|+++||++|++||+||++|
T Consensus       208 Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~~glL~SDq~L~~d~~t~~--~V~~yA~~~~~F~~~Fa~AmvKmg~i  285 (304)
T 3hdl_A          208 CPANSTRFTPITVSLDIITPSVLDNMYYTGVQLTLGLLTSDQALVTEANLSA--AVKANAMNLTAWASKFAQAMVKMGQI  285 (304)
T ss_dssp             SCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTTCCCSHHHHGGGSSHHHHH--HHHHHHHCHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCCCCccccCCCCCCcccccHHHHHHHHhCcCCCCCCHHHhcCccHHH--HHHHhccCHHHHHHHHHHHHHHHHhc
Confidence            997 32  222   2 479999999999999   8999999   58899998  99999999999999999999999999


Q ss_pred             ccCCCCCCCCccC
Q 037048          197 VSAHSRGLGGEIQ  209 (209)
Q Consensus       197 ~v~~~tg~~GeIR  209 (209)
                      +|+  ||.+||||
T Consensus       286 gv~--tg~~GeIR  296 (304)
T 3hdl_A          286 EVL--TGTQGEIR  296 (304)
T ss_dssp             TCC--CTTSSBCC
T ss_pred             CCC--CCCCCeee
Confidence            999  99999999
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 209
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 2e-40
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 8e-39
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 9e-39
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 9e-35
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 6e-32
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-30
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-23
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 8e-20
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-19
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 7e-13
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 3e-08
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  137 bits (347), Expect = 2e-40
 Identities = 76/229 (33%), Positives = 107/229 (46%), Gaps = 42/229 (18%)

Query: 1   GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV------------ 48
           GCD SVLL++  T   E+ ALP+ NS RG +V++ IK  +E+SCP +V            
Sbjct: 48  GCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEI 107

Query: 49  -VKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG 107
                GGP W V LGRRDS TA+  LAN +LP P  +L +L  +FA  GL   ++  LSG
Sbjct: 108 ASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSG 167

Query: 108 ARTIGQA------------------PTDIDPLYEVSLREKKYASG-----VSVLVTTPIS 144
             T G+A                     ++  Y   LR +   +       ++ ++TP  
Sbjct: 168 GHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQ 227

Query: 145 FDNDYYKSL---RGLLISD---FRGGSTASQPSANAYSPAAEFFLRDLA 187
           FDN YY +L    GLL SD   F      + P  N++S     F  +  
Sbjct: 228 FDNRYYSNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFR 276
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.93
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.9
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.9
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.9
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.89
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.89
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.88
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.86
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.77
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=5.8e-66  Score=450.99  Aligned_cols=205  Identities=40%  Similarity=0.652  Sum_probs=191.4

Q ss_pred             CCceeEEccCCCCCccccccCCCCCCchhHHHHHHHHHHhhhhCCCce-------------EEccCCCceeccCCCcCCC
Q 037048            1 GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPASV-------------VKQLGGPSWRVQLGRRDST   67 (209)
Q Consensus         1 GCDaSill~~~~~~~~E~~~~~N~~~l~g~dvI~~iK~~le~~cpg~V-------------v~~~GGP~~~v~~GR~D~~   67 (209)
                      ||||||||++++++.+|+++++|.++++||++|+.||++||..||++|             |+++|||.|+|++||+|++
T Consensus        48 GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~  127 (304)
T d1fhfa_          48 GCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSL  127 (304)
T ss_dssp             CSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCS
T ss_pred             CCCeeEeecCCCCccccccCCcccccchhHHHHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcC
Confidence            899999999988888999999999888999999999999999999999             8899999999999999999


Q ss_pred             CcccccccCCCCCCCCCHHHHHHHHHHcCCCHHHHHHHhcccccCCC------------------CCCCCHHHHHHHhhc
Q 037048           68 TASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSGARTIGQA------------------PTDIDPLYEVSLREK  129 (209)
Q Consensus        68 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~dlVaLsGaHtiG~~------------------d~~~~~~~~~~l~~~  129 (209)
                      +|+..++..+||.|+.++++|+..|++|||+.+|||||+||||||++                  ++.+++.|+.+|+..
T Consensus       128 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~  207 (304)
T d1fhfa_         128 TANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRAR  207 (304)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHH
T ss_pred             ccccccccccCCCCCCCHHHHHHHHHHcCCCHHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHh
Confidence            99988888899999999999999999999999999999999999987                  678999999999999


Q ss_pred             CCC-CCCCCc----cccCcccChHHHHHh---hhccccC---CCCC--CCCchHHHhhccccHHHHHHHHHHHHHHhhcC
Q 037048          130 KYA-SGVSVL----VTTPISFDNDYYKSL---RGLLISD---FRGG--STASQPSANAYSPAAEFFLRDLAFSLLQRSKW  196 (209)
Q Consensus       130 cp~-~~~~~~----~~tp~~FDn~Yy~~l---~glL~SD---~~d~--~t~~~~~V~~ya~~~~~F~~~Fa~Am~Km~~i  196 (209)
                      ||. +...++    ..||.+|||+||++|   +|||+||   +.|+  +|+.  +|+.||.|+++|+++|++||+||++|
T Consensus       208 c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~glL~SD~~L~~dp~~~t~~--~V~~yA~d~~~F~~~F~~Am~Km~~l  285 (304)
T d1fhfa_         208 CPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNGLLQSDQELFSTPGADTIP--IVNSFSSNQNTFFSNFRVSMIKMGNI  285 (304)
T ss_dssp             SCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTCCSSHHHHTTTSSTTCSSHH--HHHHHHHCHHHHHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcccccCCCCCCccccHHHHHHhhcCcccHhhHHHHhCCCchHHH--HHHHHhhCHHHHHHHHHHHHHHHhcC
Confidence            997 333332    679999999999999   8999999   5676  5666  99999999999999999999999999


Q ss_pred             ccCCCCCCCCccC
Q 037048          197 VSAHSRGLGGEIQ  209 (209)
Q Consensus       197 ~v~~~tg~~GeIR  209 (209)
                      +|+  ||.+||||
T Consensus       286 gv~--tg~~GeiR  296 (304)
T d1fhfa_         286 GVL--TGDEGEIR  296 (304)
T ss_dssp             TCC--CTTSSBCC
T ss_pred             CCC--CCCCCccc
Confidence            999  99999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure