Citrus Sinensis ID: 037134


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MNMRAVEEEESVSVSGQELDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMAFQGVLDGDENGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAKNPEVLT
cccccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccHHcccccccccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cccccEcccccccHHHHEEHHHHHHHccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHEHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
mnmraveeeesvsvsgqeldIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVAngadaryvnGVDMFRKIVRNDGVRGLYRGFGIsiltnapsnavwwpsySVAQRLVWGGVGCflrrkygdregdmmmirpdskTVMAFQGvldgdengkrgptVGQAVKSLVKEGgwmacyrglgprwasmsISATTMITTYEFLKRtsaknpevlt
mnmraveeeesvsvsgqeldIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVAngadaryvngvDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMAFQGVLDgdengkrgptVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEflkrtsaknpevlt
MNMRAveeeesvsvsGQELDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTaavasavgglsaamvaQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMAFQGVLDGDENGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWasmsisattmittYEFLKRTSAKNPEVLT
******************LDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIR****TVMAFQGVL***********VGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLK***********
********EESVSVSGQELDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQ****************DMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMA******************QAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTS*K******
****************QELDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMAFQGVLDGDENGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRT*********
********EESVSVSGQELDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMAFQGVLDGDENGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAKN*****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNMRAVEEEESVSVSGQELDIQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMAFQGVLDGDENGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAKNPEVLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
Q54VX4345 Mitochondrial substrate c yes no 0.794 0.649 0.251 3e-17
Q8BGF9314 Solute carrier family 25 yes no 0.847 0.761 0.261 7e-15
Q5RD67314 Solute carrier family 25 yes no 0.865 0.777 0.252 1e-14
Q96H78314 Solute carrier family 25 yes no 0.865 0.777 0.249 3e-14
Q5ZKP7313 Solute carrier family 25 yes no 0.780 0.702 0.260 7e-13
Q96CQ1311 Solute carrier family 25 no no 0.787 0.713 0.254 6e-12
Q6DG32311 Solute carrier family 25 no no 0.773 0.700 0.237 2e-11
Q922G0311 Solute carrier family 25 no no 0.783 0.710 0.246 3e-11
Q552L9366 Mitochondrial substrate c no no 0.812 0.625 0.212 4e-10
Q9P6L7361 Uncharacterized mitochond yes no 0.471 0.368 0.317 1e-09
>sp|Q54VX4|MCFJ_DICDI Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1 Back     alignment and function desciption
 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 50/274 (18%)

Query: 44  VARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKS---KVGSFAVSDLGFTAAVASAV 100
           + R EG RALY+GF TS  G + +RA+Y  + +  K    K  S + SDL F   ++ A+
Sbjct: 81  LIRLEGKRALYKGFLTSECGYLCSRAIYFGSYEFVKQGFLKGRSDSDSDLLFVTTISGAI 140

Query: 101 GGLSAAMVAQLVWTLVNVVTQRLMVANG-ADARYVNGVDMFRKIVRNDGVRGLYRGFGIS 159
               +  +A ++W   +V TQ + +    +  +Y  G D+F+KI    G++GLY+GFG +
Sbjct: 141 ----SEALASVIWVPFDVATQSVQIQGSLSKPKYKGGSDVFKKIYGERGIKGLYKGFGAT 196

Query: 160 ILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYG---------------DREGDMMMIR 204
           I+ N P + +WW +Y +++  +       +R+K G               D+      + 
Sbjct: 197 IIRNVPYSGIWWGTYEISKSKL---TQFNIRQKLGLKERSSHSLAVSAEIDKNNPSHEVE 253

Query: 205 PDSKTVMAFQGVLDG----------------------DENGKRGPTVGQAVKSLVKEGGW 242
            +   +    G                           EN K  P     +KS +++ G 
Sbjct: 254 NEDPIIHFISGFFAAVFATSITNPLDVAKTRLQTGVFPENEK--PNFYTIIKSTIRKEGI 311

Query: 243 MACYRGLGPRWASMSISATTMITTYEFLKRTSAK 276
            A ++GL P   + +  +   I  YE +K+ S K
Sbjct: 312 RALWKGLVPSLLTSTPYSMISIFLYEEVKKLSLK 345




Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q8BGF9|S2544_MOUSE Solute carrier family 25 member 44 OS=Mus musculus GN=Slc25a44 PE=2 SV=1 Back     alignment and function description
>sp|Q5RD67|S2544_PONAB Solute carrier family 25 member 44 OS=Pongo abelii GN=SLC25A44 PE=2 SV=2 Back     alignment and function description
>sp|Q96H78|S2544_HUMAN Solute carrier family 25 member 44 OS=Homo sapiens GN=SLC25A44 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZKP7|S2536_CHICK Solute carrier family 25 member 36 OS=Gallus gallus GN=SLC25A36 PE=2 SV=1 Back     alignment and function description
>sp|Q96CQ1|S2536_HUMAN Solute carrier family 25 member 36 OS=Homo sapiens GN=SLC25A36 PE=2 SV=1 Back     alignment and function description
>sp|Q6DG32|S2536_DANRE Solute carrier family 25 member 36-A OS=Danio rerio GN=slc25a36a PE=2 SV=1 Back     alignment and function description
>sp|Q922G0|S2536_MOUSE Solute carrier family 25 member 36 OS=Mus musculus GN=Slc25a36 PE=2 SV=1 Back     alignment and function description
>sp|Q552L9|S2540_DICDI Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1 Back     alignment and function description
>sp|Q9P6L7|YKQ9_SCHPO Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC688.09 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
255560681343 Mitochondrial carrier protein RIM2, puta 0.975 0.801 0.545 8e-91
18410193349 Mitochondrial substrate carrier family p 0.968 0.782 0.553 2e-89
297839145349 mitochondrial substrate carrier family p 0.968 0.782 0.553 2e-89
356557347340 PREDICTED: solute carrier family 25 memb 0.925 0.767 0.549 1e-85
225442186358 PREDICTED: solute carrier family 25 memb 0.978 0.770 0.505 2e-85
356519521343 PREDICTED: solute carrier family 25 memb 0.971 0.798 0.527 1e-83
356561009340 PREDICTED: solute carrier family 25 memb 0.960 0.797 0.527 2e-83
449448112351 PREDICTED: solute carrier family 25 memb 0.978 0.786 0.530 4e-83
225429628342 PREDICTED: solute carrier family 25 memb 0.957 0.789 0.482 1e-77
255550119353 protein with unknown function [Ricinus c 0.975 0.779 0.490 3e-77
>gi|255560681|ref|XP_002521354.1| Mitochondrial carrier protein RIM2, putative [Ricinus communis] gi|223539432|gb|EEF41022.1| Mitochondrial carrier protein RIM2, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 190/348 (54%), Positives = 227/348 (65%), Gaps = 73/348 (20%)

Query: 1   MNMRAVEEEESVSVSGQELDIQADIEWQMLDKWKFFL----------------------- 37
           MN+ A E+E     S +E+ I A+I+W+MLDK KFF                        
Sbjct: 1   MNLSAAEDE-----SEKEIHIPAEIDWEMLDKSKFFFLGAALFSGVSATLYPIVVLKTRQ 55

Query: 38  --------C-EIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVS 88
                   C + G  + R EGFRALYRGFGTSLMGTIPARA+Y+ AL+VTKS VG+  V 
Sbjct: 56  QVAQSQVSCIKTGFGMVRLEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNVGTATVG 115

Query: 89  DLGFTAAVASAVG----GLSAAMVAQLVWTLVNVVTQRLMVANGADA----RYVNGVDMF 140
            LGFT A A+       GLSAA+ AQLVWT ++VV+QRLMV    +A    +Y NG+D F
Sbjct: 116 -LGFTEATAATTANAVAGLSAALAAQLVWTPIDVVSQRLMVQGAGNASTTCKYSNGIDAF 174

Query: 141 RKIVRNDGVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGD--REG 198
           RKI+ +DG+RGLYRGFGISILT APSNAVWW SYSVAQR+VWGGVGC+  +K+ D     
Sbjct: 175 RKIITSDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGCYFSKKHQDGVNVD 234

Query: 199 DMMMIRPDSKTVMAFQGV-------------------------LDGDENGKRGPTVGQAV 233
               ++PDSKTVMA QGV                         LDG+ENG+RGPT+GQ V
Sbjct: 235 SNNTLKPDSKTVMAVQGVSAAMAGGVSALITMPLDTIKTRMQVLDGEENGRRGPTIGQTV 294

Query: 234 KSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAKNPEVL 281
           ++LV+EGGWMACYRGLGPRWASMS+SATTMITTYEFLKR S KN EVL
Sbjct: 295 RNLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVL 342




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410193|ref|NP_565048.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|5903071|gb|AAD55629.1|AC008017_2 Unknown protein [Arabidopsis thaliana] gi|20465267|gb|AAM19953.1| At1g72820/F3N23_2 [Arabidopsis thaliana] gi|23308305|gb|AAN18122.1| At1g72820/F3N23_2 [Arabidopsis thaliana] gi|332197255|gb|AEE35376.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297839145|ref|XP_002887454.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297333295|gb|EFH63713.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356557347|ref|XP_003546978.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max] Back     alignment and taxonomy information
>gi|225442186|ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis vinifera] gi|359482721|ref|XP_003632815.1| PREDICTED: solute carrier family 25 member 44-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356519521|ref|XP_003528421.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max] Back     alignment and taxonomy information
>gi|356561009|ref|XP_003548778.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max] Back     alignment and taxonomy information
>gi|449448112|ref|XP_004141810.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus] gi|449480693|ref|XP_004155969.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225429628|ref|XP_002280811.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550119|ref|XP_002516110.1| protein with unknown function [Ricinus communis] gi|223544596|gb|EEF46112.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2032728349 AT1G72820 [Arabidopsis thalian 0.613 0.495 0.592 2.7e-76
TAIR|locus:2179704342 AT5G26200 [Arabidopsis thalian 0.879 0.725 0.417 4.2e-51
TAIR|locus:2143161323 AT5G15640 [Arabidopsis thalian 0.790 0.690 0.347 2.7e-34
DICTYBASE|DDB_G0280083345 mcfJ "mitochondrial substrate 0.457 0.373 0.328 4.4e-20
MGI|MGI:2444391314 Slc25a44 "solute carrier famil 0.450 0.404 0.288 3.2e-12
UNIPROTKB|A0JN83314 SLC25A44 "Uncharacterized prot 0.450 0.404 0.281 6.2e-12
RGD|1307244337 Slc25a44 "solute carrier famil 0.450 0.376 0.288 7.6e-12
UNIPROTKB|F1PD97342 SLC25A44 "Uncharacterized prot 0.450 0.371 0.288 8.5e-12
UNIPROTKB|F1RLQ4331 SLC25A44 "Uncharacterized prot 0.450 0.383 0.281 9.3e-12
UNIPROTKB|Q96H78314 SLC25A44 "Solute carrier famil 0.450 0.404 0.275 1.8e-11
TAIR|locus:2032728 AT1G72820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 524 (189.5 bits), Expect = 2.7e-76, Sum P(3) = 2.7e-76
 Identities = 109/184 (59%), Positives = 128/184 (69%)

Query:    43 SVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTXXXXXXXXX 102
             ++ RHEG R LYRGFGTSLMGTIPARA+Y+ AL+VTKS VGS AVS LG T         
Sbjct:    70 TLVRHEGLRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGSAAVS-LGLTEAKAAAVAN 128

Query:   103 X----XXXXXXQLVWTLVNVVTQRLMV------ANGADARYVNGVDMFRKIVRNDGVRGL 152
                        QLVWT V+VV+QRLMV       N +   YVNG D FRKIVR DG +GL
Sbjct:   129 AVGGLSAAMAAQLVWTPVDVVSQRLMVQGSAGLVNASRCNYVNGFDAFRKIVRADGPKGL 188

Query:   153 YRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDSKTVMA 212
             YRGFGISILT APSNAVWW SYSVAQR+VWGG+GC++ +K  +   +   ++PDSKT+MA
Sbjct:   189 YRGFGISILTYAPSNAVWWASYSVAQRMVWGGIGCYVCKKDEESGNNSTTMKPDSKTIMA 248

Query:   213 FQGV 216
              QGV
Sbjct:   249 VQGV 252


GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2179704 AT5G26200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143161 AT5G15640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280083 mcfJ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:2444391 Slc25a44 "solute carrier family 25, member 44" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN83 SLC25A44 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1307244 Slc25a44 "solute carrier family 25, member 44" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PD97 SLC25A44 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RLQ4 SLC25A44 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q96H78 SLC25A44 "Solute carrier family 25 member 44" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
AT1G72820
mitochondrial substrate carrier family protein; mitochondrial substrate carrier family protein; FUNCTIONS IN- binding; INVOLVED IN- transport, mitochondrial transport; LOCATED IN- mitochondrial inner membrane, membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mitochondrial carrier protein (InterPro-IPR002067), Mitochondrial substrate carrier (InterPro-IPR001993), Mitochondrial substrate/solute carrier (InterPro-IPR018108); BEST Arabidopsis thaliana protein match is- mitochondrial substrate carrier family protein (TAIR-AT5G26200 [...] (349 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G21170
5'-AMP-activated protein kinase beta-2 subunit, putative; 5'-AMP-activated protein kinase beta- [...] (320 aa)
      0.854
AT1G79700
ovule development protein, putative; ovule development protein, putative; FUNCTIONS IN- transcr [...] (313 aa)
      0.666
ATCTH
ATCTH; transcription factor; putative Cys3His zinc finger protein (ATCTH) mRNA, complete (315 aa)
       0.550
DIN10
DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds; encodes a member of gly [...] (749 aa)
      0.512
AT4G01330
ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase; [...] (479 aa)
       0.445
TPS8
ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glyco [...] (856 aa)
       0.435
AT3G49790
ATP binding; ATP binding; FUNCTIONS IN- ATP binding; INVOLVED IN- biological_process unknown; E [...] (366 aa)
       0.416
AT1G16060
ovule development protein, putative; ovule development protein, putative; FUNCTIONS IN- transcr [...] (345 aa)
       0.409
AT3G60490
AP2 domain-containing transcription factor TINY, putative; encodes a member of the DREB subfami [...] (256 aa)
       0.408

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-16
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-07
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-06
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 9e-06
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 72.7 bits (179), Expect = 2e-16
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)

Query: 95  AVASAVGGLSAAMVAQLVWTLVNVVTQRLM-VANGADARYVNGVDMFRKIVRNDGVRGLY 153
            +AS + G  A  +A  V   ++VV  RL   A G   +Y   +D F+KI + +G+RGLY
Sbjct: 5   FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 154 RGFGISILTNAPSNAVWWPSYSVAQRLVWG 183
           +G   ++L  AP+ A+++ +Y   ++L+  
Sbjct: 65  KGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.98
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.97
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.96
PTZ00168259 mitochondrial carrier protein; Provisional 99.96
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.95
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 99.95
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0766297 consensus Predicted mitochondrial carrier protein 99.94
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 99.94
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.94
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.93
KOG0765333 consensus Predicted mitochondrial carrier protein 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.92
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.9
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.9
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.89
KOG0036463 consensus Predicted mitochondrial carrier protein 99.89
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.87
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.86
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.81
KOG1519297 consensus Predicted mitochondrial carrier protein 99.79
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG2745321 consensus Mitochondrial carrier protein [General f 99.61
KOG1519297 consensus Predicted mitochondrial carrier protein 99.45
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.39
KOG2745321 consensus Mitochondrial carrier protein [General f 99.33
KOG2954427 consensus Mitochondrial carrier protein [General f 99.27
KOG2954427 consensus Mitochondrial carrier protein [General f 98.48
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=5.6e-52  Score=333.93  Aligned_cols=274  Identities=20%  Similarity=0.241  Sum_probs=225.8

Q ss_pred             cchhhhhccccccccccccccchhhhhhhcccce------eeccc---hhhHhhhcchhhcccchHHHhhchHHHHHHHH
Q 037134            2 NMRAVEEEESVSVSGQELDIQADIEWQMLDKWKF------FLCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAVYI   72 (282)
Q Consensus         2 ~~~~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~------~~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f   72 (282)
                      +.+...+|.++++.+.++.||+|++|+|+|...-      ...+.   +..|++.||+||||||+.|++++..+..++||
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF   84 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYF   84 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHH
Confidence            4567789999999999999999999999997611      11122   66999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC--CCCCcCcHHHHHHHHHHhhccc
Q 037134           73 AALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANG--ADARYVNGVDMFRKIVRNDGVR  150 (282)
Q Consensus        73 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~--~~~~~~~~~~~~~~i~~~~G~~  150 (282)
                      .+|+.+|+++.+...+  ...++...+.+++.||+++.++++|++++|+|++.+..  ....|+++++++++|+++||++
T Consensus        85 ~~Y~~~K~~~~~~~~~--~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~r  162 (299)
T KOG0764|consen   85 FFYDFLKSFITEGFNS--GLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFR  162 (299)
T ss_pred             HHHHHHHHHHhcCCCc--ccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHH
Confidence            9999999999665544  22588999999999999999999999999999988765  4468999999999999999999


Q ss_pred             cccccchhhhhhhcccchhHHHHHHHHHHHHhcCCCCccccccCCc----cccccccCCCc---ceeeeeeeeccCCCCC
Q 037134          151 GLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDR----EGDMMMIRPDS---KTVMAFQGVLDGDENG  223 (282)
Q Consensus       151 ~ly~G~~~~~lr~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~q~~~q~~~~~  223 (282)
                      |||+|+.|.++... +.+++|++||.+|.+..+..+...++.....    +++++ -++++   .+--+....||.....
T Consensus       163 gLY~GlVP~L~Gvs-hgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~S-Kv~Ast~TYP~qVlRtRLQ~~~~~  240 (299)
T KOG0764|consen  163 GLYKGLVPGLLGVS-HGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLS-KVFASTLTYPHQVLRTRLQDQSDN  240 (299)
T ss_pred             HHHhhhhhHhhhhc-hhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHH-HHHHHHhcchHHHHHHHHHhcccC
Confidence            99999999999766 8999999999999998765554444322221    22211 11111   3333344446766446


Q ss_pred             CCCCCHHHHHHHHHHhhcHhHHhcchhHHHHHHhhhhhHHHHHHHHHhhhhccCCC
Q 037134          224 KRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAKNPE  279 (282)
Q Consensus       224 ~~~~~~~~~~~~i~~~eG~~~~yrG~~~~~~~~~~~~~i~~~~ye~~~~~~~~~~~  279 (282)
                      +.|.+.+++++++||.||++|||||+.++++|..|.+.|+|.+||.+++++.....
T Consensus       241 ~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~~  296 (299)
T KOG0764|consen  241 PRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHRT  296 (299)
T ss_pred             cccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhcccc
Confidence            78999999999999999999999999999999999999999999999998876543



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 4e-04
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%) Query: 44 VARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTXXXXXXXXXX 103 + + +G R LY+GF S+ G I RA Y K + D Sbjct: 163 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG-----MLPDPKNVHIIVSWMIAQ 217 Query: 104 XXXXXXQLVWTLVNVVTQRLMVAN---GADARYVNGVDMFRKIVRNDGVRGLYRG 155 LV + V +R+M+ + GAD Y VD +RKI +++G + ++G Sbjct: 218 TVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKG 272

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-20
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-10
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-19
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 5e-10
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score = 86.9 bits (216), Expect = 4e-20
 Identities = 48/262 (18%), Positives = 85/262 (32%), Gaps = 55/262 (20%)

Query: 42  VSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKSKVGSFAVSDLGFTAAVASA-V 100
           V + + +GF + +RG   +++   P +A+  A     K            F    A    
Sbjct: 58  VRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLA 117

Query: 101 GGLSAAMVAQLVWTLVN---VVTQRLMV--ANGADARYVNG-VDMFRKIVRNDGVRGLYR 154
            G +A   +      V        RL      GA  R   G  +   KI ++DG+RGLY+
Sbjct: 118 SGGAAGATSLCF---VYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQ 174

Query: 155 GFGISILTNAPSNAVWWPSY-------------SVAQRLVWGG-VGCF----------LR 190
           GF +S+       A ++  Y              +    +    V             +R
Sbjct: 175 GFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVR 234

Query: 191 RKYGDREGDMMMIRPDSKTVMAFQGVLDGDENGKRGPTVGQAVKSLVKEGGWMACYRGLG 250
           R+       MMM        + + G +D               + + K+ G  A ++G  
Sbjct: 235 RR-------MMMQSGRKGADIMYTGTVD-------------CWRKIAKDEGPKAFFKGAW 274

Query: 251 PRWASMSISATTMITTYEFLKR 272
                    A   +  Y+ +K+
Sbjct: 275 SNVLRGMGGAFV-LVLYDEIKK 295


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.98
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.97
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=5.4e-49  Score=339.11  Aligned_cols=266  Identities=18%  Similarity=0.183  Sum_probs=216.1

Q ss_pred             hhhhccccccccccccccchhhhhhhcccce-----------eeccc---hhhHhhhcchhhcccchHHHhhchHHHHHH
Q 037134            5 AVEEEESVSVSGQELDIQADIEWQMLDKWKF-----------FLCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAV   70 (282)
Q Consensus         5 ~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~-----------~~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~   70 (282)
                      .+.+|..+++.+.++.+|+|++|+|+|....           ...+.   .++|+++||++|||||+.+++++.++..++
T Consensus         4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i   83 (303)
T 2lck_A            4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV   83 (303)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence            4678889999999999999999999996432           11222   779999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC--CCCCcCcHHHHHHHHHHhhc
Q 037134           71 YIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANG--ADARYVNGVDMFRKIVRNDG  148 (282)
Q Consensus        71 ~f~~y~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~--~~~~~~~~~~~~~~i~~~~G  148 (282)
                      +|.+||.+++.+.+..+.    .+....+++|++||+++.++++|+|+||+|+|++..  ....|++.++++++|+++||
T Consensus        84 ~f~~ye~~k~~~~~~~~~----~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG  159 (303)
T 2lck_A           84 RIGLYDSVKQFYTKGSEH----AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEG  159 (303)
T ss_dssp             TTTHHHHHHHHHSCCCSS----CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCCcC----CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcC
Confidence            999999999988754222    567889999999999999999999999999999764  23578999999999999999


Q ss_pred             cccccccchhhhhhhcccchhHHHHHHHHHHHHhcCCCCccccccCCccccccccCCCc---ceeeeeeeeccCCCCCCC
Q 037134          149 VRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDS---KTVMAFQGVLDGDENGKR  225 (282)
Q Consensus       149 ~~~ly~G~~~~~lr~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~q~~~q~~~~~~~  225 (282)
                      +++||||+.++++|++|..+++|.+||.+|+.+.+......... ...+++.++.....   .+..+++..+|.+. ...
T Consensus       160 ~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~-~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~-~~~  237 (303)
T 2lck_A          160 IRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLP-CHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-LGQ  237 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-SSS
T ss_pred             hhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc-ccc
Confidence            99999999999999999999999999999998875432211111 11112221111111   22223333355542 236


Q ss_pred             CCCHHHHHHHHHHhhcHhHHhcchhHHHHHHhhhhhHHHHHHHHHhhhhcc
Q 037134          226 GPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAK  276 (282)
Q Consensus       226 ~~~~~~~~~~i~~~eG~~~~yrG~~~~~~~~~~~~~i~~~~ye~~~~~~~~  276 (282)
                      |.++++|+++|+++||++|||||+.|+++|.+|.++++|.+||.+|+.+.+
T Consensus       238 y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          238 YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             CCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             cCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998875



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-11
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-10
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 59.0 bits (141), Expect = 8e-11
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 8/154 (5%)

Query: 21  IQADIEWQMLDKWKFFLCEIGVSVARHEGFRALYRGFGTSLMGTIPARAVYIAALKVTKS 80
           + AD+      +    L      + + +G R LY+GF  S+ G I  RA Y         
Sbjct: 139 LAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG-----VY 193

Query: 81  KVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVAN---GADARYVNGV 137
                 + D      + S +   +   VA LV    + V +R+M+ +   GAD  Y   V
Sbjct: 194 DTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTV 253

Query: 138 DMFRKIVRNDGVRGLYRGFGISILTNAPSNAVWW 171
           D +RKI +++G +  ++G   ++L       V  
Sbjct: 254 DCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLV 287


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.95
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=6.9e-43  Score=297.37  Aligned_cols=265  Identities=15%  Similarity=0.154  Sum_probs=209.2

Q ss_pred             chhhhhccccccccccccccchhhhhhhccccee--------eccc---hhhHhhhcchhhcccchHHHhhchHHHHHHH
Q 037134            3 MRAVEEEESVSVSGQELDIQADIEWQMLDKWKFF--------LCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAVY   71 (282)
Q Consensus         3 ~~~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~~--------~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~   71 (282)
                      +++..+|+.+++++.++.+|+|++|+|+|.....        ..+.   ..+++++||+++||||+.+.+++..+..+++
T Consensus         7 ~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~   86 (292)
T d1okca_           7 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN   86 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchh
Confidence            4677899999999999999999999999853321        1111   6699999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccccccCCCc-hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC---CCCCcCcHHHHHHHHHHhh
Q 037134           72 IAALKVTKSKVGSFAVSDLGF-TAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANG---ADARYVNGVDMFRKIVRND  147 (282)
Q Consensus        72 f~~y~~~~~~~~~~~~~~~~~-~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~---~~~~~~~~~~~~~~i~~~~  147 (282)
                      |.+|+.+++.+......+.+. ......+++|++||+++.++++|+|++|+|+|.+..   ....+.+..+++++++++|
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (292)
T d1okca_          87 FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSD  166 (292)
T ss_dssp             HHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhcc
Confidence            999999999988765442222 445678899999999999999999999999998764   3457889999999999999


Q ss_pred             ccccccccchhhhhhhcccchhHHHHHHHHHHHHhcCCCCccccccCC-----ccccccccCCCc-ceeeeeeeeccCCC
Q 037134          148 GVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGD-----REGDMMMIRPDS-KTVMAFQGVLDGDE  221 (282)
Q Consensus       148 G~~~ly~G~~~~~lr~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~q~~~q~~~  221 (282)
                      |+++||+|+.++++|++|+++++|..||.+|+.+.+............     .++.+++.|.++ .++++.|..  ...
T Consensus       167 G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~--~~~  244 (292)
T d1okca_         167 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG--RKG  244 (292)
T ss_dssp             CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT--CCG
T ss_pred             chhhhhccccccccceehHhhhhhhhccchhhhcccccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCC--CCC
Confidence            999999999999999999999999999999987654332221111000     023333444444 334333221  111


Q ss_pred             CCCCCCCHHHHHHHHHHhhcHhHHhcchhHHHHHHhhhhhHHHHHHHHH
Q 037134          222 NGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFL  270 (282)
Q Consensus       222 ~~~~~~~~~~~~~~i~~~eG~~~~yrG~~~~~~~~~~~~~i~~~~ye~~  270 (282)
                      ....|.++++|+++|+++||+++||||+.|+++|.+| ++++|.+||.+
T Consensus       245 ~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         245 ADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             GGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             CCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            2336899999999999999999999999999999766 67999999964



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure