Citrus Sinensis ID: 037168

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460------
Protein Sequence
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Secondary Structure (PSIPRED)
cccccHHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccHHHHcccccccccHHHHHHHccccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccEEEccccccHHHHHHHcccccHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHccHHHHHHcccccccHHHHHHHcccHHHHHHHHHHcccccHHHHHHcccccccHHHHHHHcccHHHHHHHHHHHccHHHHccccccccHHHHHHHcccHHHHHHHHHHcccccccccHHHccccccccHHHHHHHHccccHHHHHHHHHHHcccHHHHcccccccHHHHHHHcccHHHHHHHHHccccccHHcEccccccccHHHHHHHccccHHHHHccHHHHHccHHHHHHHHHHHHccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEccccHHEEEEHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccHHHHHHHcccccc
Coil and Loop (DISEMBL)
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDelpdqsldKMTRQNKAGNTIlhetatsnhalpvadkvlrkapgllgmrnnngETALLRAARYGKVDIFNflagkisgydhatrlpflhrndktNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVksvtmphflnhrnnmgfipEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAytvpggsnentgypilinhpfFVAFTVSDVLSLTFSLAAVVTFLSMltspfrledfkhslpnkmimGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVgvfalsyfpiyitKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Flexible Loop (DISEMBL)
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILhetatsnhalpvADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Low Complexity Region (SEG)
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSvvavliatvafaaaytvPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Disordered region (IsUnstruct)
********VIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDEL**************************HALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVF**
Disordered Region (DISOPRED)
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA*************HTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Disordered Region (DISEMBL)
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Disordered Region (DISPRO)
*IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGLNYLRDKAKVLVPQWLELRVEFGVFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	466	2.2.26 [Sep-21-2011]
Q9C7A2	590	Ankyrin repeat-containing	no	no	0.815	0.644	0.257	4e-20
Q6AWW5	524	Ankyrin repeat-containing	no	no	0.766	0.681	0.234	2e-11
Q9ZU96	532	Ankyrin repeat-containing	no	no	0.761	0.667	0.229	3e-11
Q96AX9	1013	E3 ubiquitin-protein liga	yes	no	0.356	0.163	0.297	1e-05
Q8R516	973	E3 ubiquitin-protein liga	yes	no	0.321	0.154	0.299	7e-05
Q68LP1	971	E3 ubiquitin-protein liga	yes	no	0.321	0.154	0.299	0.0002
Q5ZIJ9	954	E3 ubiquitin-protein liga	yes	no	0.319	0.156	0.283	0.0004
Q02989	1411	Alpha-latroinsectotoxin-L	N/A	no	0.354	0.116	0.262	0.0007

>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 196/451 (43%), Gaps = 71/451 (15%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           +T L  A      D+V +LL      S + + ++N++G   LH  A   H   + + +L 
Sbjct: 130 ETALFTAADKGHLDVVKELLKY---SSRESIAKKNRSGYDPLHIAAIQGHH-AIVEVLLD 185

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIA 148
               L      +  T L+ AA  G  ++ N L  K      A  L  + R++  N LH+A
Sbjct: 186 HDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSK------AGNLLEISRSNNKNALHLA 239

Query: 149 ILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLV 208
               H   +E++K +LS  PQ    ID +G+  LH+A+K +  E+ + ++  +  +   V
Sbjct: 240 ARQGH---VEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADPAI---V 293

Query: 209 RKIDYNGNTIFHMAGIKRKDYVAEKM----------------------EGPALLLQDELL 246
            + D + NT  H+A  K++  + E +                      EG  L L +E  
Sbjct: 294 MQPDKSCNTALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEG--LPLSEESS 351

Query: 247 WYE---------RVKSVTMPH------FLNHRNNMGFIPEELFAIANN------ELRAQS 285
           + +         R   +  P           +N++    E+      N      ELR   
Sbjct: 352 YIKECLARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLH 411

Query: 286 KQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLT 345
           ++ + + T   +VVAVL ATVAFAA +TVPGG N N G  +++    F  F + + L+L 
Sbjct: 412 REGINNATNSVTVVAVLFATVAFAAIFTVPGGDN-NDGSAVVVGRASFKIFFIFNALALF 470

Query: 346 FSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKE 405
            SLA VV  ++++    + E     + NK+      ++L+     VAF+A+  +++  K 
Sbjct: 471 TSLAVVVVQITLVRGETKAEKRVVEVINKL------MWLASMCTSVAFLASSYIVVGRKN 524

Query: 406 SW-AKIVLYTCAFIPVGVFALSYFPIYITKS 435
            W A++V      I  GV  L     Y+ KS
Sbjct: 525 EWAAELVTVVGGVIMAGV--LGTMTYYVVKS 553

Arabidopsis thaliana (taxid: 3702)

>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1

 Score = 70.9 bits (172), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 186/470 (39%), Gaps = 113/470 (24%)

Query: 28  DDTVLHMATYTKKSDLVIKLLDELPDQSLDK-MTRQNKAGNTILH--------------- 71
           DDT LH A    K+DL+++++ E     L + +  QN++G T L+               
Sbjct: 17  DDTPLHTAVREGKTDLLLEMIGEHDGVELKELLAEQNQSGETALYVAAEYGYTDMVKILM 76

Query: 72  -------------------ETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYG 112
                                A  N  L V D ++   P L    +++  TAL  AA  G
Sbjct: 77  KHSDSVLAGTKAKNGFDAFHIAAKNGNLQVLDVLIEANPELSFTFDSSKTTALHTAASQG 136

Query: 113 KVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVE 172
             +I  FL       D    L  + R++    LH A  + H     IVK ++      V 
Sbjct: 137 HGEIVCFL------LDKGVDLAAIARSNGKTALHSAARNGH---TVIVKKLIEKKAGMVT 187

Query: 173 HIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE 232
            +D +G+  LH+A+K +  EI + +++ +     L+   D  GNT  H+A  K +  + +
Sbjct: 188 RVDKKGQTALHMAVKGQNTEIVDVLMEAD---GSLINSADNKGNTPLHIAVRKNRAEIVQ 244

Query: 233 --------------KMEGPALLLQDELLWYERVKSVTMPHFLNHRN-------------- 264
                         K    AL + ++   +E V  +      N R+              
Sbjct: 245 TVLKYCEVSRVAVNKSGETALDIAEKTGLHEIVPLLQKIGMQNARSIKPAEKVEPSGSSR 304

Query: 265 ------------------NMGFIPEELFAIAN--NELRAQSKQWLIHTTEGCSVVAVLIA 304
                               G    E+  IA   N++  +     I++T   ++VA+LIA
Sbjct: 305 KLKETVSEIGHEVHTQLEQTGRTRREIQGIAKRVNKMHTEGLNNAINST---TLVAILIA 361

Query: 305 TVAFAAAYTVPGGSNEN-----TGYPI----LINHPFFVAFTVSDVLSLTFSLAAVVTFL 355
           TVAFAA + VPG   ++      GY +        P F+ F V D  +L  SLA VV   
Sbjct: 362 TVAFAAIFNVPGQYTDDPKDVPPGYSLGEARAAPRPEFLIFVVFDSFALFISLAVVVVQT 421

Query: 356 SMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKE 405
           S++    R +    ++ NK+      ++++  ++ VAFV+   +++  KE
Sbjct: 422 SVVVIERRAKKQMMAIINKL------MWMACIMISVAFVSLSFVVVGEKE 465

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1

 Score = 70.5 bits (171), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 166/422 (39%), Gaps = 67/422 (15%)

Query: 55  SLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKV 114
           SL+ +  ++K+     H  A   H L +  ++LR  P L  + + +  + L  AA    +
Sbjct: 83  SLETVKIRSKSDMNAFHVAAKRGH-LGIVKELLRLWPELCRICDASNTSPLYAAAVQDHL 141

Query: 115 DIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI 174
           +I N +       D       + R +    LH A     +G + IVK ++      V   
Sbjct: 142 EIVNAM------LDVDPSCAMIVRKNGKTSLHTA---GRYGLLRIVKALIEKDAAIVGVK 192

Query: 175 DDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE-- 232
           D +G+  LH+A+K R LE+ E ++Q +  +   + + D  GNT  H+A  K +  +    
Sbjct: 193 DKKGQTALHMAVKGRSLEVVEEILQADYTI---LNERDRKGNTALHIATRKARPQITSLL 249

Query: 233 ------------KMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA--- 277
                         +  A+ L D+L + E    +          +  FI  E  A A   
Sbjct: 250 LTFTAIEVNAINNQKETAMDLADKLQYSESALEINEALVEAGAKHGRFIGREDEARALKR 309

Query: 278 --------------------------NNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAA 311
                                       ELR   ++ + +TT   +VVAVL A++AF A 
Sbjct: 310 AVSDIKHEVQSQLLQNEKTNRRVSGIAKELRKLHREAVQNTTNSITVVAVLFASIAFLAI 369

Query: 312 YTVPGG---SNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFK 368
           + +PG       + G   +     F  F + +  SL  SLA VV  ++++    R +   
Sbjct: 370 FNLPGQYFTEGSHVGQANIAGRTGFRVFCLLNATSLFISLAVVVVQITLVAWDTRAQKKV 429

Query: 369 HSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTC-AFIPVGVFA-LS 426
            S+ NK+      ++ +      AF+A    ++    SW  I +    A I VG  A + 
Sbjct: 430 VSVVNKL------MWAACACTFGAFLAIAFAVVGKGNSWMAITITLLGAPILVGTLASMC 483

Query: 427 YF 428
           YF
Sbjct: 484 YF 485

Arabidopsis thaliana (taxid: 3702)

>sp|Q96AX9|MIB2_HUMAN E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens GN=MIB2 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 19/185 (10%)

Query: 9   VIELCRKVPDHALYVFTIHDDTVLHMA-TYTKKSDLVIKLLDELPDQSLDKMTRQNKAGN 67
           V  LC +  D  + +   H DT LH A +    +  ++++L E+P+  +D +T  N  G 
Sbjct: 605 VRALCERGCD--VNLPDAHSDTPLHSAISAGTGASGIVEVLTEVPN--ID-VTATNSQGF 659

Query: 68  TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGY 127
           T+LH  +   HAL V  K+L +A  L+  +  +G TAL  AA     ++   L       
Sbjct: 660 TLLHHASLKGHALAVR-KILARARQLVDAKKEDGFTALHLAALNNHREVAQILI------ 712

Query: 128 DHATRLPFLHRNDK-TNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAI 186
               R     RN K  + LH+A+   H G + ++ D       +V   D+EG   LHVA+
Sbjct: 713 -REGRCDVNVRNRKLQSPLHLAVQQAHVGLVPLLVDAGC----SVNAEDEEGDTALHVAL 767

Query: 187 KYRQL 191
           +  QL
Sbjct: 768 QRHQL 772

E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q8R516|MIB2_MOUSE E3 ubiquitin-protein ligase MIB2 OS=Mus musculus GN=Mib2 PE=1 SV=2

 Score = 49.3 bits (116), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 17/167 (10%)

Query: 27  HDDTVLHMA-TYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADK 85
           H DT LH A +    +  ++++L E+P   +D +T  N  G T+LH  +   H L V  K
Sbjct: 579 HADTPLHSAISAGAGASSIVEVLTEVP--GID-VTATNSQGFTLLHHASLKGHVLAVR-K 634

Query: 86  VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK-TNV 144
           +L +A  L+  +  +G TAL  AA     ++   L           R     RN K  + 
Sbjct: 635 ILARARQLVDAKKEDGFTALHLAALNNHREVAQVLI-------REGRCDVNVRNRKLQSP 687

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQL 191
           LH+A+   H G + ++ D       +V   D+EG   LHVA++  QL
Sbjct: 688 LHLAVQQAHLGLVPLLVDAGC----SVNTEDEEGDTALHVALQRHQL 730

E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q68LP1|MIB2_RAT E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus GN=Mib2 PE=2 SV=2

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 17/167 (10%)

Query: 27  HDDTVLHMA-TYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADK 85
           H DT LH A +    +  ++++L E+P   +D +T  N  G T+LH  +   H L V  K
Sbjct: 577 HADTPLHSAISAGAGASSIVEVLTEVP--GID-VTATNSQGFTLLHHASLKGHVLAVR-K 632

Query: 86  VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK-TNV 144
           +L +A  L+  +  +G TAL  AA     ++   L           R     RN K  + 
Sbjct: 633 ILARARQLVDAKKEDGFTALHLAALNNHREVAQVLI-------REGRCDVNVRNRKLQSP 685

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQL 191
           LH+A+   H G + ++ D        V   D+EG   LHVA++  QL
Sbjct: 686 LHLAVQQAHLGLVPLLVDAGC----NVNTEDEEGDTALHVALQRHQL 728

E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors.

Rattus norvegicus (taxid: 10116)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q5ZIJ9|MIB2_CHICK E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus GN=MIB2 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 17/166 (10%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
           H DT LH A  T    ++I++L E+P+  +D  T QN  G  +LH +A   + L +  K+
Sbjct: 563 HGDTPLHYA-ITADYKVIIEILTEVPN--ID-FTVQNCQGFNLLHYSALKGNKLAIK-KI 617

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV-L 145
           L +A  L+  +  +G TAL  AA     ++   L  +        R     +N++    L
Sbjct: 618 LARARQLVDSKKEDGFTALHLAALNNHKEVAEILIKE-------GRCDVNVKNNRNQTPL 670

Query: 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQL 191
           H+AI+  H G ++    +L      V   D++G   +H+A++ +QL
Sbjct: 671 HLAIIQGHVGLVQ----LLVSEGSDVNAEDEDGDTAMHIALERQQL 712

E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors.

Gallus gallus (taxid: 9031)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q02989|LITA_LATTR Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus PE=1 SV=1

 Score = 45.8 bits (107), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 29/194 (14%)

Query: 32  LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILH-ETATSNHALPVADKVLRKA 90
           LH+A+ T    LVI+LL +  D     +TR    G + LH      N  +P     L + 
Sbjct: 741 LHLASATGNKQLVIELLAKNAD-----VTRLTSKGFSALHLGIIGKNEEIPF---FLVEK 792

Query: 91  PGLLGMRNNNGETALLRAARYGKVDIFNFL---AGKISGYDHATRLPFLHRNDKTNVLHI 147
              +  + N+G T L  AA  GK +IF  L      I   D  +++P          +H 
Sbjct: 793 GANVNDKTNSGVTPLHFAAGLGKANIFRLLLSRGADIKAEDINSQMP----------IHE 842

Query: 148 AILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRL 207
           A+ + H   +EIV+ ++   P  +   +       ++A++ R  +IF+  V  +      
Sbjct: 843 AVSNGH---LEIVRILIEKDPSLMNVKNIRNEYPFYLAVEKRYKDIFDYFVSKDAN---- 895

Query: 208 VRKIDYNGNTIFHM 221
           V ++D+NGNT+ H+
Sbjct: 896 VNEVDHNGNTLLHL 909

Insecticidal presynaptic neurotoxin that induces neurotransmitter exocytosis. Binds to neurexin-1-alpha (NRXN1), latrophilin-1 (LPHN1), and receptor-type tyrosine-protein phosphatase S (PTPRS), and induces neurotransmitter exocytosis through two calcium-dependent mechanisms (membrane pore formation and signaling via latrophilin) and a yet to be defined calcium-independent mechanism (By similarity). The toxin forms channels with 0.55-0.58 nm entrance diameter and a relatively small conductance in planar phospholipid membranes.

Latrodectus tredecimguttatus (taxid: 6925)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	466
224115930	551	predicted protein [Populus trichocarpa]	0.952	0.805	0.544	1e-146
224115944	579	predicted protein [Populus trichocarpa]	0.937	0.754	0.528	1e-145
224115926	370	predicted protein [Populus trichocarpa]	0.635	0.8	0.630	1e-107
224115932	581	predicted protein [Populus trichocarpa]	0.624	0.500	0.621	1e-105
224115940	581	predicted protein [Populus trichocarpa]	0.624	0.500	0.617	1e-105
359496086	1514	PREDICTED: uncharacterized protein LOC10	0.587	0.180	0.605	3e-96
147841570	636	hypothetical protein VITISV_039462 [Viti	0.587	0.430	0.605	4e-96
359496761	490	PREDICTED: ankyrin repeat-containing pro	0.598	0.569	0.605	8e-96
296080840	493	unnamed protein product [Vitis vinifera]	0.590	0.557	0.605	1e-95
359497521	512	PREDICTED: ankyrin repeat-containing pro	0.675	0.615	0.562	8e-95

>gi|224115930|ref|XP_002317163.1| predicted protein [Populus trichocarpa] gi|222860228|gb|EEE97775.1| predicted protein [Populus trichocarpa]

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/507 (54%), Positives = 344/507 (67%), Gaps = 63/507 (12%)

Query: 1   MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT 60
           ++K ++++V ELC+K+ DHAL+V T++DDTVLHMATY K++ LV  LLD LP   LDK+T
Sbjct: 26  LMKGNKKRVAELCQKIQDHALHVITVNDDTVLHMATYAKEASLVENLLDALPSHHLDKLT 85

Query: 61  RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           RQN  GNTILHETATSNH + +ADK+L+KAPGLLGMRN+NGETAL RAARYGK D+FNFL
Sbjct: 86  RQNGVGNTILHETATSNHTVALADKLLKKAPGLLGMRNHNGETALFRAARYGKTDMFNFL 145

Query: 121 AGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVE-------- 172
           A K+SGYD +    ++ R+DKT +LH+AILSLHF   E V+    ++  AVE        
Sbjct: 146 AAKVSGYDESGLQFYVQRSDKTTILHMAILSLHFVWREKVQKQKQLHRSAVELAKFLVRK 205

Query: 173 --------------------------------HIDDE--------GRNILHVAIKYRQLE 192
                                           H+ ++        G   L +A K   +E
Sbjct: 206 DTSWELTYSSIDQSKPKIHKYGERGGQERQEVHLSNKILDKEESLGETPLILATKSGCVE 265

Query: 193 IFERVVQM------------EIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA-EKMEGPAL 239
           I E ++++               L RL RKID +GN+I H  G KRKD+V+ EKMEGPA 
Sbjct: 266 IVEEILKLYPQAVEHIDDEGRNVLHRLTRKIDGDGNSILHTVGRKRKDFVSDEKMEGPAF 325

Query: 240 LLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVV 299
           LLQ+ELLW+ERV+ VT  HF  HRNN     E  F  AN+ELR  +K+WL  T EGCSVV
Sbjct: 326 LLQEELLWFERVEKVTPSHFQGHRNNKMLTAEGFFFTANSELRNLAKEWLKTTAEGCSVV 385

Query: 300 AVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLT 359
           AVLIATVAFAAAYTVPGG N++TG P+L+N PFFV FTV+DVLSLTF+L AVVTFLS+L+
Sbjct: 386 AVLIATVAFAAAYTVPGGPNQSTGVPVLVNKPFFVVFTVADVLSLTFALTAVVTFLSILS 445

Query: 360 SPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIP 419
           SPFR +DFKH LPNK+++GFTFLF SV +MMVAF ATILLMI SKESW KI LY  +FIP
Sbjct: 446 SPFRFKDFKHILPNKLMIGFTFLFFSVAMMMVAFGATILLMIYSKESWEKITLYAVSFIP 505

Query: 420 VGVFALSYFPIYITKSVTRGLNYLRDK 446
           V + AL YFP+Y   S+++  NYL  K
Sbjct: 506 VSISALVYFPLY--SSLSKTYNYLLKK 530

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115944|ref|XP_002317167.1| predicted protein [Populus trichocarpa] gi|222860232|gb|EEE97779.1| predicted protein [Populus trichocarpa]

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/526 (52%), Positives = 347/526 (65%), Gaps = 89/526 (16%)

Query: 1   MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT 60
           ++K ++ +V ELC+K+ DHAL+V T++DDTVLHMATY K++ LV KLLDELPD  LDK+T
Sbjct: 26  LMKGNKNRVAELCQKIQDHALHVITVNDDTVLHMATYAKEASLVEKLLDELPDHHLDKLT 85

Query: 61  RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           RQN+ GNTILHETATSNH + +ADK+L+KAPGLLGMRN+NGETAL RAARYGK D+FNFL
Sbjct: 86  RQNRVGNTILHETATSNHTVALADKLLKKAPGLLGMRNHNGETALFRAARYGKTDMFNFL 145

Query: 121 AGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVE-------- 172
           A K+SGYD +    ++ R+DKT +LH+AILSLHF   E V+    ++  AVE        
Sbjct: 146 AAKVSGYDESGLQFYVQRSDKTTILHMAILSLHFVWREKVQKQKQLHRSAVELAKFLVRK 205

Query: 173 --------------------------------HIDDE--------GRNILHVAIKYRQLE 192
                                           H+ ++        G   L +A K   +E
Sbjct: 206 DTSWELTYSSIDQSKPKIHKYGERGGQERQEVHLSNKILDKEESLGETPLILATKSGCVE 265

Query: 193 IFERVVQMEIPLRRLVRKIDYNGNTIFHMA------------------------------ 222
           I E ++++     + V  ID  G  + H+A                              
Sbjct: 266 IVEEILKL---YPQAVEHIDDEGRNVLHVAIKYRQRKIFELVKGMDVPMKRLTRKIDGDG 322

Query: 223 -------GIKRKDYVA-EKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELF 274
                  G KRKD+V+ EKMEGPA LLQ+ELLW+ERVK VT  HFLNH+NNM    E  F
Sbjct: 323 NSILHTVGRKRKDFVSDEKMEGPAFLLQEELLWFERVKEVTPSHFLNHQNNMKLTAEGYF 382

Query: 275 AIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFV 334
             AN+ELR  +K+WL  T EGCSVVAVLIATVAFAAAYTVPGG N++TG P+L+N PFFV
Sbjct: 383 ITANSELRNLAKEWLKTTAEGCSVVAVLIATVAFAAAYTVPGGPNQSTGVPVLVNKPFFV 442

Query: 335 AFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFV 394
            FTV+DVLSLTF+L +VVTFLS+LTSPFR +DFKH+LPNK+++GFTFLFLSV +MMVAF 
Sbjct: 443 VFTVTDVLSLTFALTSVVTFLSILTSPFRFKDFKHTLPNKLMVGFTFLFLSVAMMMVAFG 502

Query: 395 ATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKSVTRGL 440
           ATI+LMI SKESW KI LY  +FIPVG+FALSYFP+Y + S T  L
Sbjct: 503 ATIILMIYSKESWTKITLYAVSFIPVGIFALSYFPLYPSLSKTYNL 548

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115926|ref|XP_002317161.1| predicted protein [Populus trichocarpa] gi|222860226|gb|EEE97773.1| predicted protein [Populus trichocarpa]

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/314 (63%), Positives = 238/314 (75%), Gaps = 18/314 (5%)

Query: 149 ILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLV 208
           IL+   GC+EIV++IL  YPQAVEHIDD+GRN+LHVAIKYRQL+IF+ V +ME+P++RL 
Sbjct: 38  ILATKSGCVEIVEEILKAYPQAVEHIDDDGRNVLHVAIKYRQLKIFKLVTRMEVPMKRLG 97

Query: 209 RKIDYNGNTIFHMAGIKRKDYVA-EKMEGPALLLQDELLWYE---------------RVK 252
           RKID +GN+I H  G K KD V+ EKMEGPA LLQ+ELLW+E               RV+
Sbjct: 98  RKIDKDGNSILHNVGKKSKDVVSDEKMEGPAFLLQEELLWFEFFERYVLFVIHVRTQRVE 157

Query: 253 SVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAY 312
            VT  HF  HRNN     E  F  AN+ELR  +K+WL  T EGCSVVAVLIATVAFAAAY
Sbjct: 158 KVTPSHFQGHRNNKMLTAEGFFFTANSELRNLAKEWLKTTAEGCSVVAVLIATVAFAAAY 217

Query: 313 TVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLP 372
           TVPGG N++TG P+L+N PFFV FTV+DVLSLTF+L AVVTFLS+L+SPFR +DFKH LP
Sbjct: 218 TVPGGPNQSTGVPVLVNKPFFVVFTVADVLSLTFALTAVVTFLSILSSPFRFKDFKHILP 277

Query: 373 NKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYI 432
           NK+++GFTFLF SV +MMVAF ATILLMI SKESW KI LY  +FIPV + AL YFP+Y 
Sbjct: 278 NKLMIGFTFLFFSVAMMMVAFGATILLMIYSKESWEKITLYAVSFIPVSISALVYFPLY- 336

Query: 433 TKSVTRGLNYLRDK 446
             S+++  NYL  K
Sbjct: 337 -SSLSKTYNYLLKK 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115932|ref|XP_002317164.1| predicted protein [Populus trichocarpa] gi|222860229|gb|EEE97776.1| predicted protein [Populus trichocarpa]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/301 (62%), Positives = 235/301 (78%), Gaps = 10/301 (3%)

Query: 110 RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQ 169
           RYG++       G   G   A R+P   R D      + IL+   G +EIV++IL +YPQ
Sbjct: 275 RYGEI-------GGQEGMSLAARIP--ERMDDVGETPL-ILATKSGIVEIVEEILRLYPQ 324

Query: 170 AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDY 229
           AVEH+DDEGRN+LHVAIKYR+L+IFE V +ME+P++RLVRKID  GN+I H  GIKRKD+
Sbjct: 325 AVEHVDDEGRNVLHVAIKYRELKIFELVTKMEVPMKRLVRKIDNEGNSILHTVGIKRKDF 384

Query: 230 VAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWL 289
           V+EKMEGPA LLQ+ELLW+ERV+ VT PHF++H N+     E LF  AN+ELR+ +K+W+
Sbjct: 385 VSEKMEGPAFLLQEELLWFERVEKVTPPHFISHHNSQNLSAECLFITANSELRSSAKEWM 444

Query: 290 IHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLA 349
             T EG SVVAVLIATVAFAAAYTVPGG N++TG P+L+N PFFV FTVSDVLSLTF+L 
Sbjct: 445 KSTAEGSSVVAVLIATVAFAAAYTVPGGPNQSTGVPVLVNKPFFVVFTVSDVLSLTFALT 504

Query: 350 AVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAK 409
           +VVTFLS+L+SPFR +DFKH+LPNK++ GFTFLFLSV +MMVAF +TI L I +KE+WAK
Sbjct: 505 SVVTFLSILSSPFRFKDFKHTLPNKLMAGFTFLFLSVAMMMVAFGSTIFLTIYNKENWAK 564

Query: 410 I 410
           +
Sbjct: 565 V 565

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115940|ref|XP_002317166.1| predicted protein [Populus trichocarpa] gi|222860231|gb|EEE97778.1| predicted protein [Populus trichocarpa]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/301 (61%), Positives = 235/301 (78%), Gaps = 10/301 (3%)

Query: 110 RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQ 169
           RYG++       G   G   A R+P   R D      + IL+   G +EIV++IL +YPQ
Sbjct: 275 RYGEI-------GGQEGMSLAARIP--ERMDDVGETPL-ILATKSGIVEIVEEILRLYPQ 324

Query: 170 AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDY 229
           AVEH+DDEGRN+LHVAIKYR+L+IFE V +ME+P++RLVRKID  GN+I H  GIKRKD+
Sbjct: 325 AVEHVDDEGRNVLHVAIKYRELKIFELVTKMEVPMKRLVRKIDNEGNSILHTVGIKRKDF 384

Query: 230 VAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWL 289
           V+EK+EGPA LLQ+ELLW+ERV+ VT PHF++H N+     E LF  AN+ELR+ +K+W+
Sbjct: 385 VSEKIEGPAFLLQEELLWFERVEKVTPPHFISHHNSQNLSAECLFITANSELRSSAKEWM 444

Query: 290 IHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLA 349
             T EG SVVAVLIATVAFAAAYTVPGG N++TG P+L+N PFFV FTVSDVLSLTF+L 
Sbjct: 445 KSTAEGSSVVAVLIATVAFAAAYTVPGGPNQSTGVPVLVNKPFFVVFTVSDVLSLTFALT 504

Query: 350 AVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAK 409
           +VVTFLS+L+SPFR +DFKH+LPNK++ GFTFLFLSV +MMVAF +TI L I +KE+WAK
Sbjct: 505 SVVTFLSILSSPFRFKDFKHTLPNKLMAGFTFLFLSVAMMMVAFGSTIFLTIYNKENWAK 564

Query: 410 I 410
           +
Sbjct: 565 V 565

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496086|ref|XP_003635148.1| PREDICTED: uncharacterized protein LOC100853163 [Vitis vinifera]

 Score =  358 bits (919), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 169/279 (60%), Positives = 220/279 (78%)

Query: 155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYN 214
           G  EIV+ IL V+PQA+EHI++ G+NILHVA+KYRQ+EIF  VV  E+  RRLVRK D  
Sbjct: 531 GIREIVEQILDVHPQAIEHINNRGKNILHVAVKYRQIEIFNLVVNNEMLARRLVRKTDEW 590

Query: 215 GNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELF 274
           GN+I HM G KR  Y+AEK++ PAL LQ ELL +ERVK V+  +F+ H N     PEELF
Sbjct: 591 GNSILHMVGKKRSGYIAEKIQSPALQLQKELLLFERVKEVSKTYFIKHLNENKQTPEELF 650

Query: 275 AIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFV 334
           A   ++L   +  WL  T+E C++VAVLIATVAFAAAYT+PGG N++TG P+L++ PFFV
Sbjct: 651 AKTYSDLHNSATDWLKRTSENCTIVAVLIATVAFAAAYTIPGGPNQSTGLPLLLSQPFFV 710

Query: 335 AFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFV 394
            FT++DV+SLTF+L +VVTFLS+LTS FRL+DFK+SLP K+++GFTFL LSV +MMVAF 
Sbjct: 711 IFTLTDVISLTFALTSVVTFLSILTSSFRLQDFKNSLPQKLMLGFTFLILSVSMMMVAFA 770

Query: 395 ATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYIT 433
           ATI+LMI++KE W KIVLY+ AF+PV +FA+SY P+Y++
Sbjct: 771 ATIVLMIRNKERWTKIVLYSVAFLPVTLFAISYSPLYLS 809

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841570|emb|CAN77609.1| hypothetical protein VITISV_039462 [Vitis vinifera]

 Score =  358 bits (918), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 169/279 (60%), Positives = 220/279 (78%)

Query: 155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYN 214
           G  EIV+ IL V+PQA+EHI++ G+NILHVA+KYRQ+EIF  VV  E+  RRLVRK D  
Sbjct: 301 GIREIVEQILDVHPQAIEHINNRGKNILHVAVKYRQIEIFNLVVNNEMLARRLVRKTDEW 360

Query: 215 GNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELF 274
           GN+I HM G KR  Y+AEK++ PAL LQ ELL +ERVK V+  +F+ H N     PEELF
Sbjct: 361 GNSILHMVGKKRSGYIAEKIQSPALQLQKELLLFERVKEVSKTYFIKHLNENKQTPEELF 420

Query: 275 AIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFV 334
           A   ++L   +  WL  T+E C++VAVLIATVAFAAAYT+PGG N++TG P+L++ PFFV
Sbjct: 421 AKTYSDLHNSATDWLKRTSENCTIVAVLIATVAFAAAYTIPGGPNQSTGLPLLLSQPFFV 480

Query: 335 AFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFV 394
            FT++DV+SLTF+L +VVTFLS+LTS FRL+DFK+SLP K+++GFTFL LSV +MMVAF 
Sbjct: 481 IFTLTDVISLTFALTSVVTFLSILTSSFRLQDFKNSLPQKLMLGFTFLILSVSMMMVAFA 540

Query: 395 ATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYIT 433
           ATI+LMI++KE W KIVLY+ AF+PV +FA+SY P+Y++
Sbjct: 541 ATIVLMIRNKERWTKIVLYSVAFLPVTLFAISYSPLYLS 579

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496761|ref|XP_003635326.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  357 bits (916), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 169/279 (60%), Positives = 220/279 (78%)

Query: 155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYN 214
           G  EIV+ IL V+PQA+EHI++ G+NILHVA+KYRQ+EIF  VV  E+  RRLVRK D  
Sbjct: 155 GIREIVEQILDVHPQAIEHINNRGKNILHVAVKYRQIEIFNLVVNNEMLARRLVRKTDEW 214

Query: 215 GNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELF 274
           GN+I HM G KR  Y+AEK++ PAL LQ ELL +ERVK V+  +F+ H N     PEELF
Sbjct: 215 GNSILHMVGKKRSGYIAEKIQSPALQLQKELLLFERVKEVSKTYFIKHLNENKQTPEELF 274

Query: 275 AIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFV 334
           A   ++L   +  WL  T+E C++VAVLIATVAFAAAYT+PGG N++TG P+L++ PFFV
Sbjct: 275 AKTYSDLHNSATDWLKRTSENCTIVAVLIATVAFAAAYTIPGGPNQSTGLPLLLSQPFFV 334

Query: 335 AFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFV 394
            FT++DV+SLTF+L +VVTFLS+LTS FRL+DFK+SLP K+++GFTFL LSV +MMVAF 
Sbjct: 335 IFTLTDVISLTFALTSVVTFLSILTSSFRLQDFKNSLPQKLMLGFTFLILSVSMMMVAFA 394

Query: 395 ATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYIT 433
           ATI+LMI++KE W KIVLY+ AF+PV +FA+SY P+Y++
Sbjct: 395 ATIVLMIRNKERWTKIVLYSVAFLPVTLFAISYSPLYLS 433

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296080840|emb|CBI18764.3| unnamed protein product [Vitis vinifera]

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 169/279 (60%), Positives = 220/279 (78%)

Query: 155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYN 214
           G  EIV+ IL V+PQA+EHI++ G+NILHVA+KYRQ+EIF  VV  E+  RRLVRK D  
Sbjct: 3   GIREIVEQILDVHPQAIEHINNRGKNILHVAVKYRQIEIFNLVVNNEMLARRLVRKTDEW 62

Query: 215 GNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELF 274
           GN+I HM G KR  Y+AEK++ PAL LQ ELL +ERVK V+  +F+ H N     PEELF
Sbjct: 63  GNSILHMVGKKRSGYIAEKIQSPALQLQKELLLFERVKEVSKTYFIKHLNENKQTPEELF 122

Query: 275 AIANNELRAQSKQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENTGYPILINHPFFV 334
           A   ++L   +  WL  T+E C++VAVLIATVAFAAAYT+PGG N++TG P+L++ PFFV
Sbjct: 123 AKTYSDLHNSATDWLKRTSENCTIVAVLIATVAFAAAYTIPGGPNQSTGLPLLLSQPFFV 182

Query: 335 AFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFV 394
            FT++DV+SLTF+L +VVTFLS+LTS FRL+DFK+SLP K+++GFTFL LSV +MMVAF 
Sbjct: 183 IFTLTDVISLTFALTSVVTFLSILTSSFRLQDFKNSLPQKLMLGFTFLILSVSMMMVAFA 242

Query: 395 ATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYIT 433
           ATI+LMI++KE W KIVLY+ AF+PV +FA+SY P+Y++
Sbjct: 243 ATIVLMIRNKERWTKIVLYSVAFLPVTLFAISYSPLYLS 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497521|ref|XP_003635551.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  353 bits (907), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 181/322 (56%), Positives = 236/322 (73%), Gaps = 7/322 (2%)

Query: 122 GKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNI 181
           GK S   + TR  F +  +K   L +A +S   G  EIV +IL  YPQA+EH +D+GRNI
Sbjct: 144 GKTSPEVNRTR--FNNIRNKETPLFLATMS---GIPEIVDEILKKYPQAIEHYNDQGRNI 198

Query: 182 LHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLL 241
           LHVAI YRQ+EIF+RVV+ME+P RRL+R  D  GN+I HM G K K YV+ K   PA+ L
Sbjct: 199 LHVAINYRQIEIFDRVVKMEMPARRLLRATDAKGNSILHMVGKKGKRYVSRKSRSPAIQL 258

Query: 242 QDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSVVAV 301
           Q+ELL +ERVK  +  HFL   N+     +ELFA    EL  ++K+WL  T E C++VAV
Sbjct: 259 QEELLLFERVKEYSKSHFLKVFNHNNQTADELFASNYCELHEEAKEWLKRTAENCTIVAV 318

Query: 302 LIATVAFAAAYTVPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSP 361
           LIATVAFAAAYT+PGG N++TG P+L++ PFFV FT++DV+SLT++L +V+TFLS+LTSP
Sbjct: 319 LIATVAFAAAYTIPGGPNQSTGIPLLLSQPFFVVFTLADVISLTYALTSVITFLSILTSP 378

Query: 362 FRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVG 421
           F+L+DFK SL  K+++GFTFL LSV +MMVAF ATI+LMI +KE W KIVLY+ AF+PV 
Sbjct: 379 FQLQDFKKSLLRKLMLGFTFLILSVSMMMVAFAATIILMIHNKERWTKIVLYSVAFLPVI 438

Query: 422 VFALSYFPIY--ITKSVTRGLN 441
           +FALSY P+Y  + K+ T  LN
Sbjct: 439 IFALSYSPLYYRLLKACTGLLN 460

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	466
TAIR|locus:2175413	669	AT5G04700 "AT5G04700" [Arabido	0.523	0.364	0.286	2.5e-31
TAIR|locus:2175448	603	AT5G04730 "AT5G04730" [Arabido	0.538	0.416	0.291	1.7e-29
TAIR|locus:2180228	625	AT5G04690 "AT5G04690" [Arabido	0.530	0.395	0.261	2.4e-28
TAIR|locus:2165174	347	AT5G35810 "AT5G35810" [Arabido	0.592	0.795	0.246	3.9e-28
TAIR|locus:2080240	574	AT3G54070 "AT3G54070" [Arabido	0.663	0.538	0.266	8.6e-28
TAIR|locus:2075009	607	AT3G09550 [Arabidopsis thalian	0.834	0.640	0.245	2.7e-12
TAIR|locus:2092522	590	ITN1 "INCREASED TOLERANCE TO N	0.821	0.649	0.255	1e-11
TAIR|locus:2128791	683	AT4G03470 [Arabidopsis thalian	0.839	0.572	0.224	2.2e-11
TAIR|locus:2020833	616	AT1G03670 "AT1G03670" [Arabido	0.386	0.292	0.255	5.7e-10
TAIR|locus:2181768	524	ANK1 "ankyrin-like1" [Arabidop	0.388	0.345	0.277	4.8e-09

TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
 Identities = 72/251 (28%), Positives = 126/251 (50%)

Query:   184 VAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQD 243
             +A+++RQ ++F  +  ++     L+   D +GN + H+AG          + G  L LQ 
Sbjct:   400 LAVEFRQEKVFSLLYGLDDRKYLLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQR 459

Query:   244 ELLWYERVKSVTMPHFLNHR-NNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSXXXXX 302
             EL W++ V+ +  P     R N     P E+F   +  LR ++++W+  T   CS     
Sbjct:   460 ELQWFKEVERIA-PEIEKERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAAL 518

Query:   303 XXXXXXXXXXXXPGGSNENT-GYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSP 361
                         PGG+++N+ G P  +    F+ F VSD++S   S  +V+ FL +LT+ 
Sbjct:   519 IVTVTFAAVFTVPGGTDDNSKGKPFHLRDRRFIIFIVSDLISCFASCTSVLIFLGILTAR 578

Query:   362 FRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESW--AKIVLYTCAFIP 419
             +  +DF   LP KMI G + LF+S+  M++AF + +  M+  +  W  A  +L+ C  +P
Sbjct:   579 YSFDDFLVFLPTKMIAGLSILFVSIAAMLIAFSSALFTMMGKEGKWIVAPTILFAC--LP 636

Query:   420 VGVFALSYFPI 430
               +F L  +P+
Sbjct:   637 ALLFVLLQYPL 647

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 1.7e-29, P = 1.7e-29
 Identities = 74/254 (29%), Positives = 133/254 (52%)

Query:   178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAG-IKRKDYVAEKMEG 236
             GRN+  +A+++++ +IF  +  ++     L+R  D   N I H+AG +   D ++ K+ G
Sbjct:   329 GRNLFQLAVEFKKEKIFNLIHGLDDRKVTLLRSYDKGNNNILHIAGRLSTPDQLS-KISG 387

Query:   237 PALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEGC 296
              AL +Q E  W++ V+S+     +  +N     P ++F   +  LR + ++W+ +T   C
Sbjct:   388 AALKMQRESQWFKEVESLVSEREVVQKNKDNKTPRQIFEHYHEHLRKEGEEWMKYTATAC 447

Query:   297 SXXXXXXXXXXXXXXXXXPGGSNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLS 356
             S                 PGG +  +G P+++N   F AF  +D L+   S  +V+ FLS
Sbjct:   448 SFVAALIATVTFQAIFTVPGGIDGTSGSPLILNDLHFRAFIFTDTLAFFASCISVLIFLS 507

Query:   357 MLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCA 416
             +LTS +  +DF  SLP KMI+G + LF+S+  M+VAF+ ++   ++ K +     L   A
Sbjct:   508 ILTSRYSFDDFIVSLPRKMILGQSILFISIASMLVAFITSLSASMRHKPALV-YPLKPLA 566

Query:   417 FIPVGVFALSYFPI 430
               P  +F +  +P+
Sbjct:   567 SFPSLLFLMLQYPL 580

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
 Identities = 66/252 (26%), Positives = 123/252 (48%)

Query:   181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALL 240
             + + A++ RQ ++F  +  +       +   D +GN++ H+AG    +Y    +    L 
Sbjct:   355 LFNTAVQVRQEKVFSLLYGLGDRKYLFLADKDSDGNSVLHLAGYPPPNYKLATVVSATLQ 414

Query:   241 LQDELLWYERVKSVTMPHFLNHR-NNMGFIPEELFAIANNELRAQSKQWLIHTTEGCSXX 299
             +Q EL W++ ++ + +P   N R N     P E+F   +  +R ++++W+  T   CS  
Sbjct:   415 MQRELQWFKEMERI-VPAIENERVNTENLTPIEIFRKEHEAMRLEAEKWMKDTAMSCSLV 473

Query:   300 XXXXXXXXXXXXXXXPGGSNENTG-YPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSML 358
                            PGG+++N+G  P   +   FV F VSD++S   +  +V+ FL +L
Sbjct:   474 AALIVTVTFAAIFTVPGGTDDNSGGRPFHRHERIFVIFIVSDLISCFAACTSVLIFLGIL 533

Query:   359 TSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFI 418
             T+ +  +DF  SLP  MI G + LF+S+  M+VAF + +  +       A  + + C   
Sbjct:   534 TARYAFDDFLFSLPANMIAGLSTLFVSIAAMLVAFSSALFTIFNDPWIVAPTIFFAC--F 591

Query:   419 PVGVFALSYFPI 430
             P  +F +  +P+
Sbjct:   592 PALLFVMIQYPL 603

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 70/284 (24%), Positives = 145/284 (51%)

Query:   155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEI--PLRRLVRKID 212
             G +E++  ++  YP  +  +D + +++ H+A   R  +IF R+ ++     L  + ++ +
Sbjct:    42 GNLELLLILIRSYPDLIWTVDHKNQSLFHIAAINRHEKIFNRIYELGAIKDLIAMYKEKE 101

Query:   213 YNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEE 272
              N N +  +A +   + + + + G AL +Q E+LWY+ VK +    ++  +N    +  +
Sbjct:   102 SNDNLLHLVARLPPPNRL-QVVSGAALQMQREILWYKAVKEIVPRVYIKTKNKKEEVAHD 160

Query:   273 LFAIANNELRAQSKQWLIHTTEGCSXXXXXXXXXXXXXXXXXPGGSN-----ENTGYPIL 327
             LF   ++ LR + ++W+  T   C                  PGG++     +  G+P  
Sbjct:   161 LFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLGFPTF 220

Query:   328 INHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVC 387
                 +F  F +SD ++L  S+ +++ FLS+LTS +    F+ +LP K+++G   LF+S+ 
Sbjct:   221 RKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEASFQTTLPTKLMLGLLALFVSII 280

Query:   388 LMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIY 431
              M++AF AT++L+   +  W+ I+L   A      F + +F ++
Sbjct:   281 SMVLAFTATLILIRDQEPKWSLILLVYVASATALSFVVLHFQLW 324

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)]

 Score = 325 (119.5 bits), Expect = 8.6e-28, P = 8.6e-28
 Identities = 86/323 (26%), Positives = 158/323 (48%)

Query:   118 NFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE 177
             + LA K S   H ++L    +   + +L  A      G +EI+  ++  +   +  +D+ 
Sbjct:   232 HLLARKTSAISHKSQLNLFQQVASSWLLFDAA---ELGNVEILVILIRSHLDLLWIVDNN 288

Query:   178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVR--KIDYNGNTIFHMAGIKRKDYVAEKME 235
              R + HVA  YR   IF  + ++   ++ L+   K   + +T+ H+          +   
Sbjct:   289 NRTLFHVAALYRHENIFSLIYELG-GIKDLIASYKEKQSKDTLLHLVARLPPMNRQQVGS 347

Query:   236 GPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLIHTTEG 295
             G AL +Q ELLW++ VK +    ++  +N  G +  ++F   +  LR + ++W+  T   
Sbjct:   348 GAALHMQKELLWFKAVKEIVPRSYIETKNTKGELAHDIFTEQHENLRKEGERWMKETATA 407

Query:   296 CSXXXXXXXXXXXXXXXXXPGGSNE-----NT-GYPILINHPFFVAFTVSDVLSLTFSLA 349
             C                  PGG+++     NT G+P       F  FT+SD ++L  S+ 
Sbjct:   408 CMLGATLIATVVFAAAITIPGGNDDSGDKANTLGFPNFRKRLLFDIFTLSDSVALFSSMM 467

Query:   350 AVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLMIKSKESWAK 409
             ++V FLS+ TS +  EDF++ LP K++ G + LF+S+  M++AF  +++L+   K S + 
Sbjct:   468 SIVIFLSIFTSRYAEEDFRYDLPTKLMFGLSALFISIISMILAFTFSMILIRVEKASLS- 526

Query:   410 IVLYTC-AFIPVGVFALSYFPIY 431
             +VL +C A +    FA  YF ++
Sbjct:   527 LVLISCLASLTALTFAYLYFHLW 549

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2075009 AT3G09550 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
 Identities = 105/427 (24%), Positives = 185/427 (43%)

Query:    32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP 91
             LH+A       +V  LL+  P   L K   Q+ A  T L   AT  H+  V +++L K  
Sbjct:   182 LHIACSQGHRSIVQLLLEHEPQ--LSKTVAQSNA--TPLVSAATRGHS-EVVNELLAKDS 236

Query:    92 GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS 151
              LL +  +NG+ AL  AAR G VDI   L  K       T      +  +T+ LH+A+  
Sbjct:   237 SLLEISRSNGKNALHLAARQGHVDIVRTLLDKDPQLARRT-----DKKGQTS-LHMAVKG 290

Query:   152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM-EIPLRRLVRK 210
             +     ++V+ +L   P  V   D  G  +LH+A + ++ EI   ++Q+ +  +  L R 
Sbjct:   291 VSS---QVVRLLLRADPAIVMLPDKFGNTVLHIATRKKRAEIVNELLQLPDTNVNALTR- 346

Query:   211 IDYNGNTIFHMA-GIKRKDYVAEKME---GPALLLQDELLWY--ERVKSVTMPHFLNHRN 264
              D+   T + +A G+   +  AE  E       L  +EL     E  K+VT      H  
Sbjct:   347 -DHK--TAYDIAEGLTHSEETAEIKEILSRCGALKANELNQPRDELRKTVTEIKKDVHTQ 403

Query:   265 --NMGFIPEELFAIANNELRAQSKQWLIHTTEGCSXXXXXXXXXXXXXXXXXPGGSNENT 322
                     + +  IA  ELR   +  + + T   +                 PGG +++ 
Sbjct:   404 LEQTRKTNKNVDGIAK-ELRKLHRAGINNATNSVTVVAVLFATVAFAAIFTVPGGDDDH- 461

Query:   323 GYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFL 382
             G  ++++   F  F + + ++L  SLA VV  ++++    + E     + NK++      
Sbjct:   462 GVAVMVHATSFKIFFIFNAIALFTSLAVVVVQITLVRGETKTERRVVEVINKLMW----- 516

Query:   383 FLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPV-GVFALSYFPIYITKSVTRGLN 441
               SVC   VAF+++  +++  +  +A +V+     + + G+  LS    Y+ KS    + 
Sbjct:   517 LASVCTT-VAFISSSYIVVGRRNRYAAVVVTVIGTVTMTGI--LSIMTYYVVKSKRTRIV 573

Query:   442 YLRDKAK 448
               ++K K
Sbjct:   574 RKKEKKK 580

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2092522 ITN1 "INCREASED TOLERANCE TO NACL" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 110/431 (25%), Positives = 181/431 (41%)

Query:    32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP 91
             LH+A       +V  LLD   D +L +    + A  T L   A   H   V +++L KA 
Sbjct:   168 LHIAAIQGHHAIVEVLLDH--DATLSQTFGPSNA--TPLVSAAMRGHT-EVVNQLLSKAG 222

Query:    92 GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS 151
              LL +  +N + AL  AAR G V++   L  K      A R+    +  +T  LH+A+  
Sbjct:   223 NLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQL--ARRID---KKGQT-ALHMAVKG 276

Query:   152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM-EIPLRRLVRK 210
                   E+VK +L   P  V   D      LHVA + ++ EI E ++ + +     L R 
Sbjct:   277 QSS---EVVKLLLDADPAIVMQPDKSCNTALHVATRKKRAEIVELLLSLPDTNANTLTR- 332

Query:   211 IDYNGNTIFHMA-GI---KRKDYVAEKMEGPALLLQDELLW-YERVKSVTMPHFLNHRNN 265
              D+   T   +A G+   +   Y+ E +     L  +EL    + ++S T+      +N+
Sbjct:   333 -DHK--TALDIAEGLPLSEESSYIKECLARSGALRANELNQPRDELRS-TVTQI---KND 385

Query:   266 MGFIPEELFAIANN------ELRAQSKQWLIHTTEGCSXXXXXXXXXXXXXXXXXPGGSN 319
             +    E+      N      ELR   ++ + + T   +                 PGG N
Sbjct:   386 VHIQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDN 445

Query:   320 ENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGF 379
              N G  +++    F  F + + L+L  SLA VV  ++++    + E     + NK++   
Sbjct:   446 -NDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMW-- 502

Query:   380 TFLFLSVCLMMVAFVATILLMIKSKESWA-KIVLYTCAFIPVGVFALSYFPIYITKSV-T 437
                  S+C   VAF+A+  +++  K  WA ++V      I  GV  L     Y+ KS  T
Sbjct:   503 ---LASMCTS-VAFLASSYIVVGRKNEWAAELVTVVGGVIMAGV--LGTMTYYVVKSKRT 556

Query:   438 RGLNYLRDKAK 448
             R +   R K K
Sbjct:   557 RSM---RKKVK 564

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IDA

TAIR|locus:2128791 AT4G03470 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 98/437 (22%), Positives = 181/437 (41%)

Query:    32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP 91
             L++A   K + LV  +L    D    K    N  G   L   A ++ +  + D +L + P
Sbjct:   239 LYLAVEAKDASLVKAMLGN--DGPQRK--NLNLEGRKYLAHAALNSLSTDILDVILNEYP 294

Query:    92 GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS 151
              L+  R+  G T L   A  G      +  G  +  + + +  F+  +D +  +H+A+  
Sbjct:   295 SLVDERDEEGRTCLSFGASIG------YHKGVCNLLNRSRKGVFVCDDDGSYPIHLAVEK 348

Query:   152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKI 211
                G I++VK+I    P +   ++ +G+N+LH+A +  +  I   +   E  +  L  + 
Sbjct:   349 ---GRIKVVKEICKRCPYSKLLLNKKGQNLLHIAAESGKFRILRHLTAHE-QINHLANEK 404

Query:   212 DYNGNTIFHMAGIKRKDYVAEKMEGPA-LLLQDE--LLWYERVKSVTMPHFLNHRNNMGF 268
             D +GNT  H+A I  +     ++ G   LL+Q+   L+  +  +S   PH++  R  +  
Sbjct:   405 DVDGNTPLHLATIYWRPRAVRELGGKKNLLIQNNNGLVALDIAESKLQPHYI-FRERLTL 463

Query:   269 IPEELFAIANNELRAQSK-QWLIHTTEGCSXX--------XXXXXXXXXXXXXXXPGG-- 317
             +        N+   A +  Q      +G +                         PGG  
Sbjct:   464 LALVQLHFQNDPRCAHTMIQTRPIMPQGGNKDYINALLVVAALITTVTFTSGFTIPGGFK 523

Query:   318 -SNENTGYPILINHPFFVAFTVSDVLSLTFSLAAVVTF-LSMLTSPFRLEDFKHSLPNKM 375
              S  N G   LI +P  + F + D+L+L  S  AVV+  L+ L  P     ++ S+   M
Sbjct:   524 DSTPNVGMANLITNPRLILFLIFDILALETSFLAVVSLILAQLGDPTL---YQSSVRVAM 580

Query:   376 IMGFTFLFLSVCLMMVAFVATILLMIKSKESWAKIVLYTCAFIPVGVFALSYFPIYITKS 435
             I     L+ ++  M +AF   ++++      W   V++ C    +   A S F  ++   
Sbjct:   581 IS----LYFAMYFMTLAFFF-VMVIAAGNVRWLVYVIF-CLIFSILTLAFSRFMPHLL-- 632

Query:   436 VTRGLNYLRDKAKVLVP 452
                 L+Y     K+++P
Sbjct:   633 ----LHYCGSSYKLMMP 645

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2020833 AT1G03670 "AT1G03670" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
 Identities = 49/192 (25%), Positives = 99/192 (51%)

Query:    32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP 91
             L+MA      +LV+K+L+     S+        +G +++H    +N    +   VLR+ P
Sbjct:   184 LYMAVEAGYHELVLKMLESSSSPSI---LASMFSGKSVIHAAMKANRR-DILGIVLRQDP 239

Query:    92 GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHA-TRLPFLHRNDKTNVLHIAIL 150
             GL+ +RN  G T L   A  G  +   ++   ++ +D A + L ++  +D    +H+A  
Sbjct:   240 GLIELRNEEGRTCLSYGASMGCYEGIRYI---LAEFDKAASSLCYVADDDGFTPIHMAAK 296

Query:   151 SLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK 210
               H   + I+K+ L   P + E ++++ +NI HVA    + ++ + +++++   +R++ +
Sbjct:   297 EGH---VRIIKEFLKHCPDSRELLNNQCQNIFHVAAIAGKSKVVKYLLKLDEG-KRMMNE 352

Query:   211 IDYNGNTIFHMA 222
              D NGNT  H+A
Sbjct:   353 QDINGNTPLHLA 364

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181768 ANK1 "ankyrin-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
 Identities = 55/198 (27%), Positives = 87/198 (43%)

Query:    28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKM-TRQNKAGNTILHETATSNHALPVADKV 86
             DDT LH A    K+DL+++++ E     L ++   QN++G T L+  A   +   V  K+
Sbjct:    17 DDTPLHTAVREGKTDLLLEMIGEHDGVELKELLAEQNQSGETALYVAAEYGYTDMV--KI 74

Query:    87 LRKAPG--LLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV 144
             L K     L G +  NG  A   AA+ G + + + L       +    L F   + KT  
Sbjct:    75 LMKHSDSVLAGTKAKNGFDAFHIAAKNGNLQVLDVLI------EANPELSFTFDSSKTTA 128

Query:   145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPL 204
             LH A    H G  EIV  +L             G+  LH A +     I +++++ +  +
Sbjct:   129 LHTAASQGH-G--EIVCFLLDKGVDLAAIARSNGKTALHSAARNGHTVIVKKLIEKKAGM 185

Query:   205 RRLVRKIDYNGNTIFHMA 222
                V ++D  G T  HMA
Sbjct:   186 ---VTRVDKKGQTALHMA 200

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00110143 hypothetical protein (551 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	466
pfam13962	114	pfam13962, PGG, Domain of unknown function	5e-25
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-11
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-10
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-08
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-07
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.003

>gnl|CDD|222475 pfam13962, PGG, Domain of unknown function

 Score = 98.7 bits (247), Expect = 5e-25
 Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 13/118 (11%)

Query: 286 KQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNENT-----GYPILINHP-FFVAFTVS 339
            +WL  T     VVA LIATV FAA +T PGG  ++      G PIL   P  F AF VS
Sbjct: 1   SEWLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGHHAGTPILAGKPRRFKAFFVS 60

Query: 340 DVLSLTFSLAAVVTFLSMLTSPFRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATI 397
           + ++   SL AV+  L        +  F   LP +++   T L+LS+  +MVAF A  
Sbjct: 61  NTIAFVASLVAVILLLY------IVPSFSRRLP-RLLALLTLLWLSLLSLMVAFAAGS 111

The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 15/127 (11%)

Query: 96  MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG 155
            R+ +G T L  AA  G +++   L     G D          ND    LH+A      G
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLEN--GAD-----VNAKDNDGRTPLHLAA---KNG 51

Query: 156 CIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG 215
            +EIVK +L      V   D +G   LH+A +   L++    V++ +     V   D +G
Sbjct: 52  HLEIVKLLLE-KGADVNARDKDGNTPLHLAARNGNLDV----VKLLLKHGADVNARDKDG 106

Query: 216 NTIFHMA 222
            T  H+A
Sbjct: 107 RTPLHLA 113

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
           +++ G T LH  A++ H L V  K+L +    +  ++N+G T L  AA+ G ++I   L 
Sbjct: 3   RDEDGRTPLHLAASNGH-LEVV-KLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 122 GKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNI 181
            K +  +           D    LH+A      G +++VK +L  +   V   D +GR  
Sbjct: 61  EKGADVNARD-------KDGNTPLHLAA---RNGNLDVVKLLLK-HGADVNARDKDGRTP 109

Query: 182 LHVAIKYRQLEI 193
           LH+A K   LE+
Sbjct: 110 LHLAAKNGHLEV 121

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 17/138 (12%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
              T LH+A      ++V  LL+   D +      ++  G T LH  A + H L +   +
Sbjct: 6   DGRTPLHLAASNGHLEVVKLLLENGADVNA-----KDNDGRTPLHLAAKNGH-LEIVKLL 59

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLH 146
           L K    +  R+ +G T L  AAR G +D+   L     G D           D    LH
Sbjct: 60  LEKGA-DVNARDKDGNTPLHLAARNGNLDVVKLLLKH--GAD-----VNARDKDGRTPLH 111

Query: 147 IAILSLHFGCIEIVKDIL 164
           +A  +   G +E+VK +L
Sbjct: 112 LAAKN---GHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)

Query: 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDIL 164
           L  AA+ G +++   L  K  G D       ++  D    LH+A  +   G +EIVK +L
Sbjct: 1   LHLAAKNGNLELVKLLLEK--GAD-------VNLGDTDTALHLAARN---GNLEIVKLLL 48

Query: 165 SVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
             +   V   D +G   LH+A +   LEI +
Sbjct: 49  E-HGADVNAKDKDGNTALHLAARNGNLEIVK 78

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 9/116 (7%)

Query: 29  DTVLHMATYTKKS-----DLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA 83
           DT LH+A           ++   LL+   D  ++    +++ GNT LH  A +  A    
Sbjct: 107 DTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVN--NLRDEDGNTPLHWAALNGDAD--I 162

Query: 84  DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN 139
            ++L +A      RN+ G TAL  AA+ G++++   L  K               N
Sbjct: 163 VELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVAN 218

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           G T LH+ A S   L +  K L +    +   + +G TAL  AA  G +++   L
Sbjct: 1   GRTALHKAAISGR-LELV-KYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLL 53

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	466
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510	929	consensus Ankyrin repeat protein [General function	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
KOG0510	929	consensus Ankyrin repeat protein [General function	100.0
PHA02875	413	ankyrin repeat protein; Provisional	99.97
PHA02878	477	ankyrin repeat protein; Provisional	99.97
PHA02876	682	ankyrin repeat protein; Provisional	99.97
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.97
PHA02989	494	ankyrin repeat protein; Provisional	99.97
PHA03100	480	ankyrin repeat protein; Provisional	99.97
PHA02791	284	ankyrin-like protein; Provisional	99.97
PHA02798	489	ankyrin-like protein; Provisional	99.97
PHA03095	471	ankyrin-like protein; Provisional	99.97
PHA02859	209	ankyrin repeat protein; Provisional	99.97
PHA02989	494	ankyrin repeat protein; Provisional	99.96
PHA02917	661	ankyrin-like protein; Provisional	99.96
PHA02798	489	ankyrin-like protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
KOG0508	615	consensus Ankyrin repeat protein [General function	99.95
PHA02917	661	ankyrin-like protein; Provisional	99.95
KOG0508	615	consensus Ankyrin repeat protein [General function	99.95
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.94
PHA02795	437	ankyrin-like protein; Provisional	99.94
PHA02792	631	ankyrin-like protein; Provisional	99.94
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.94
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.93
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.93
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.93
PF13962	113	PGG: Domain of unknown function	99.93
PHA02730	672	ankyrin-like protein; Provisional	99.92
PHA02795	437	ankyrin-like protein; Provisional	99.92
PHA02730	672	ankyrin-like protein; Provisional	99.92
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.91
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.91
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.91
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.89
PHA02792	631	ankyrin-like protein; Provisional	99.89
KOG0514	452	consensus Ankyrin repeat protein [General function	99.89
KOG0514	452	consensus Ankyrin repeat protein [General function	99.88
PHA02743	166	Viral ankyrin protein; Provisional	99.88
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.87
PHA02741	169	hypothetical protein; Provisional	99.86
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.85
PHA02743	166	Viral ankyrin protein; Provisional	99.85
PHA02741	169	hypothetical protein; Provisional	99.85
PHA02736	154	Viral ankyrin protein; Provisional	99.84
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.84
PHA02736	154	Viral ankyrin protein; Provisional	99.83
PHA02884	300	ankyrin repeat protein; Provisional	99.82
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.81
PHA02884	300	ankyrin repeat protein; Provisional	99.79
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.79
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.78
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.78
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.76
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.74
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.72
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.7
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.68
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.68
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.66
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.63
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.53
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.53
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.44
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.4
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.37
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.37
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.35
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.35
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.34
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.34
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.32
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.3
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.26
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.22
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.82
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.74
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.68
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.66
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.64
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.63
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.56
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.52
KOG0522	560	consensus Ankyrin repeat protein [General function	98.52
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.51
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.51
PF13606	30	Ank_3: Ankyrin repeat	98.5
KOG0522	560	consensus Ankyrin repeat protein [General function	98.48
PF13606	30	Ank_3: Ankyrin repeat	98.38
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.35
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.35
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.33
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.21
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.14
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.11
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.04
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.94
KOG2384	223	consensus Major histocompatibility complex protein	97.67
KOG2384	223	consensus Major histocompatibility complex protein	97.66
KOG0511	516	consensus Ankyrin repeat protein [General function	97.6
KOG0511	516	consensus Ankyrin repeat protein [General function	97.5
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.04
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.9
KOG2505	591	consensus Ankyrin repeat protein [General function	95.7
KOG2505	591	consensus Ankyrin repeat protein [General function	95.08
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	90.76
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	90.5
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	87.08
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	84.62
KOG4591	280	consensus Uncharacterized conserved protein, conta	80.18

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.9e-38  Score=266.00  Aligned_cols=200  Identities=24%  Similarity=0.248  Sum_probs=181.9

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHH
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA   83 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v   83 (466)
                      ....++.+++.+.++......|.+|+||||+||..|+.+++++|+++    .+..++.+|..|+||||.||..|+. ++|
T Consensus        14 ~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq----~nv~~ddkDdaGWtPlhia~s~g~~-evV   88 (226)
T KOG4412|consen   14 CEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQ----PNVKPDDKDDAGWTPLHIAASNGND-EVV   88 (226)
T ss_pred             chHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhc----CCCCCCCccccCCchhhhhhhcCcH-HHH
Confidence            34567888998887554444555999999999999999999999983    3456788899999999999999985 999


Q ss_pred             HHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHH
Q 037168           84 DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDI  163 (466)
Q Consensus        84 ~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~L  163 (466)
                      +.|+.+.+.++|..++.|+||||||+.+|+.+++++|++.       ++.++.+|+.|+||||   .|+..|..+++++|
T Consensus        89 k~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~-------ga~i~~kD~~~qtplH---RAAavGklkvie~L  158 (226)
T KOG4412|consen   89 KELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK-------GALIRIKDKQGQTPLH---RAAAVGKLKVIEYL  158 (226)
T ss_pred             HHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc-------CCCCcccccccCchhH---HHHhccchhhHHHH
Confidence            9999998899999999999999999999999999999999       7789999999999999   88999999999999


Q ss_pred             HHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          164 LSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       164 l~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      +. .++.+|.+|+.|+||||.|...|+.++..+|+++|++    .+..|++| ||+-.|+-
T Consensus       159 i~-~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd----~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  159 IS-QGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGAD----TDREDKEG-TALRIACN  213 (226)
T ss_pred             Hh-cCCCCCcccccCccHHHHHHhccCchHHHHHHHhccc----eeeccccC-chHHHHHH
Confidence            98 8899999999999999999889999999999999999    89999999 99887763

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.1e-36  Score=255.43  Aligned_cols=215  Identities=19%  Similarity=0.163  Sum_probs=189.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCC-CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNK-AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL  105 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~-~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL  105 (466)
                      .+.++.+.+|+.....-++.+++..+    ..++.+|. +|+||||+||..|+. +++++|++..+..++.+|..|||||
T Consensus         2 e~~~~~~~~~~~~~~~kveel~~s~~----kSL~~r~dqD~Rt~LHwa~S~g~~-eiv~fLlsq~nv~~ddkDdaGWtPl   76 (226)
T KOG4412|consen    2 EYASLGKAICENCEEFKVEELIQSDP----KSLNARDDQDGRTPLHWACSFGHV-EIVYFLLSQPNVKPDDKDDAGWTPL   76 (226)
T ss_pred             CccchHHHHHhhchHHHHHHHHhcCh----hhhhccccccCCceeeeeeecCch-hHHHHHHhcCCCCCCCccccCCchh
Confidence            35688999999999999999999654    24666666 999999999999997 9999999877788999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA  185 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A  185 (466)
                      |.||+.|+.|+|+.|+.+.      +.++|..++.|+||||   +|+..|..|++++|++ .++.++.+|+.|+||||-|
T Consensus        77 hia~s~g~~evVk~Ll~r~------~advna~tn~G~T~LH---yAagK~r~eIaqlLle-~ga~i~~kD~~~qtplHRA  146 (226)
T KOG4412|consen   77 HIAASNGNDEVVKELLNRS------GADVNATTNGGQTCLH---YAAGKGRLEIAQLLLE-KGALIRIKDKQGQTPLHRA  146 (226)
T ss_pred             hhhhhcCcHHHHHHHhcCC------CCCcceecCCCcceeh---hhhcCChhhHHHHHHh-cCCCCcccccccCchhHHH
Confidence            9999999999999999873      5789999999999999   7778999999999999 8899999999999999999


Q ss_pred             HHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccC
Q 037168          186 IKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNN  265 (466)
Q Consensus       186 ~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~  265 (466)
                      +.-|+.+++++|+..|+.    +|.+|+.|+||||.|.-.++.+...+|                   +..+.+.+..|+
T Consensus       147 AavGklkvie~Li~~~a~----~n~qDk~G~TpL~~al~e~~~d~a~lL-------------------V~~gAd~~~edk  203 (226)
T KOG4412|consen  147 AAVGKLKVIEYLISQGAP----LNTQDKYGFTPLHHALAEGHPDVAVLL-------------------VRAGADTDREDK  203 (226)
T ss_pred             HhccchhhHHHHHhcCCC----CCcccccCccHHHHHHhccCchHHHHH-------------------HHhccceeeccc
Confidence            999999999999999988    999999999999999666677665444                   445677889999


Q ss_pred             CCCChHHHHHHHhHH
Q 037168          266 MGFIPEELFAIANNE  280 (466)
Q Consensus       266 ~g~Tp~~l~~~~~~~  280 (466)
                      +| ||+.++...-.+
T Consensus       204 e~-t~~~~a~~~l~~  217 (226)
T KOG4412|consen  204 EG-TALRIACNELLE  217 (226)
T ss_pred             cC-chHHHHHHHHHH
Confidence            99 998877654433

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.4e-35  Score=278.34  Aligned_cols=221  Identities=14%  Similarity=0.095  Sum_probs=188.2

Q ss_pred             hHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHH
Q 037168            6 EQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADK   85 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~   85 (466)
                      ..+++++|.+.+ .  +..|.+|+||||+|+..|+.++++.|++.+     ++++..  +|+||||+|+..|+. ++++.
T Consensus        11 ~~~~~~~Lis~~-a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~g-----a~~n~~--d~~TpLh~Aa~~g~~-eiV~l   79 (284)
T PHA02791         11 SKQLKSFLSSKD-A--FKADVHGHSALYYAIADNNVRLVCTLLNAG-----ALKNLL--ENEFPLHQAATLEDT-KIVKI   79 (284)
T ss_pred             HHHHHHHHHhCC-C--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCc-----CCCcCC--CCCCHHHHHHHCCCH-HHHHH
Confidence            456777887762 3  467999999999999999999999999954     445544  478999999999996 99999


Q ss_pred             HHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC-CChhhHHHHHhhcCcHHHHHHHH
Q 037168           86 VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK-TNVLHIAILSLHFGCIEIVKDIL  164 (466)
Q Consensus        86 Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g-~TpLh~A~~a~~~g~~~~v~~Ll  164 (466)
                      |++. +++++.+|..|+||||+|+..|+.+++++|++.       +++++.++..| .||||   .|+..|+.++++.|+
T Consensus        80 LL~~-Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~-------gadin~~~~~g~~TpL~---~Aa~~g~~eivk~LL  148 (284)
T PHA02791         80 LLFS-GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-------NWRLMFYGKTGWKTSFY---HAVMLNDVSIVSYFL  148 (284)
T ss_pred             HHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCcCccCCCCCcHHHH---HHHHcCCHHHHHHHH
Confidence            9987 788999999999999999999999999999998       56777888887 58999   777899999999999


Q ss_pred             HHCCCcccccc-cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc-hhhhhccCcchhhhccCChhhhhh
Q 037168          165 SVYPQAVEHID-DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI-FHMAGIKRKDYVAEKMEGPALLLQ  242 (466)
Q Consensus       165 ~~~~~~~~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp-LHlAa~~~~~~~~~~l~~~~~~l~  242 (466)
                      +..+..   .| ..|+||||+|+.+|+.+++++|+++|++    +|.+|..|.|| ||+|+..++.+++++|        
T Consensus       149 ~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd----~n~~d~~g~t~~L~~Aa~~~~~e~v~lL--------  213 (284)
T PHA02791        149 SEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTS----TNTNNSLLFIPDIKLAIDNKDLEMLQAL--------  213 (284)
T ss_pred             hcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCCC----CCcccCCCCChHHHHHHHcCCHHHHHHH--------
Confidence            854432   23 3589999999999999999999999998    89999999987 9999999999999877        


Q ss_pred             hHhhHHhhhhhcCcccccccccCCCCChHHHHH
Q 037168          243 DELLWYERVKSVTMPHFLNHRNNMGFIPEELFA  275 (466)
Q Consensus       243 ~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~  275 (466)
                                 +..+.+++.+|.+| ||++.++
T Consensus       214 -----------l~~Ga~in~~~~~~-~~l~~~e  234 (284)
T PHA02791        214 -----------FKYDINIYSVNLEN-VLLDDAE  234 (284)
T ss_pred             -----------HHCCCCCccCcccC-ccCCCHH
Confidence                       34566678888744 7776554

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.5e-34  Score=292.49  Aligned_cols=206  Identities=14%  Similarity=0.138  Sum_probs=185.6

Q ss_pred             CCccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH
Q 037168            1 MIKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL   80 (466)
Q Consensus         1 i~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~   80 (466)
                      +..||.+.+..++...+ ..++..+.+|.||||.|++.|+.++|++|++     .|++++..+..|.||||.|+..|+. 
T Consensus         9 i~~gd~~~v~~ll~~~~-~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~-----~Ga~~n~~~~~~~t~L~~A~~~~~~-   81 (434)
T PHA02874          9 IYSGDIEAIEKIIKNKG-NCINISVDETTTPLIDAIRSGDAKIVELFIK-----HGADINHINTKIPHPLLTAIKIGAH-   81 (434)
T ss_pred             HhcCCHHHHHHHHHcCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-
Confidence            35799999999998764 5577788899999999999999999999999     5567888999999999999999996 


Q ss_pred             HHHHHHHHhC----------------------CCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc
Q 037168           81 PVADKVLRKA----------------------PGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR  138 (466)
Q Consensus        81 ~~v~~Ll~~~----------------------~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d  138 (466)
                      +++++|++.+                      +.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|
T Consensus        82 ~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-------gad~n~~d  154 (434)
T PHA02874         82 DIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY-------GADVNIED  154 (434)
T ss_pred             HHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhC-------CCCCCCcC
Confidence            9999998753                      345778899999999999999999999999998       67888899


Q ss_pred             CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168          139 NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI  218 (466)
Q Consensus       139 ~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp  218 (466)
                      .+|.||||   .|+..|+.++++.|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++    ++.+|..|.||
T Consensus       155 ~~g~tpLh---~A~~~~~~~iv~~Ll~-~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~----i~~~~~~g~Tp  226 (434)
T PHA02874        155 DNGCYPIH---IAIKHNFFDIIKLLLE-KGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNH----IMNKCKNGFTP  226 (434)
T ss_pred             CCCCCHHH---HHHHCCcHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----CcCCCCCCCCH
Confidence            99999999   7778999999999998 8899999999999999999999999999999999988    88889999999


Q ss_pred             hhhhhccCcc
Q 037168          219 FHMAGIKRKD  228 (466)
Q Consensus       219 LHlAa~~~~~  228 (466)
                      ||+|+..+..
T Consensus       227 L~~A~~~~~~  236 (434)
T PHA02874        227 LHNAIIHNRS  236 (434)
T ss_pred             HHHHHHCChH
Confidence            9999987654

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-33  Score=288.02  Aligned_cols=235  Identities=16%  Similarity=0.128  Sum_probs=203.6

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCC------------------chhhhhccCC
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQ------------------SLDKMTRQNK   64 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~------------------~~~~~~~~d~   64 (466)
                      .|+.+.|..++..+  ++++..+..|.||||.|+..|+.+++++|++.+.+.                  .+.+++.+|.
T Consensus        45 ~g~~~iv~~Ll~~G--a~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~  122 (434)
T PHA02874         45 SGDAKIVELFIKHG--ADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDA  122 (434)
T ss_pred             cCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCC
Confidence            46677776666554  678888999999999999999999999999976542                  2456788999


Q ss_pred             CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168           65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV  144 (466)
Q Consensus        65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp  144 (466)
                      .|.||||+|+..|+. ++++.|++. +.+++.+|.+|.||||+|+..|+.+++++|++.       +.+++.+|..|.||
T Consensus       123 ~g~T~Lh~A~~~~~~-~~v~~Ll~~-gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~-------g~~~n~~~~~g~tp  193 (434)
T PHA02874        123 ELKTFLHYAIKKGDL-ESIKMLFEY-GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEK-------GAYANVKDNNGESP  193 (434)
T ss_pred             CCccHHHHHHHCCCH-HHHHHHHhC-CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-------CCCCCCCCCCCCCH
Confidence            999999999999996 999999988 778999999999999999999999999999998       66788899999999


Q ss_pred             hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      ||   .|+..|+.++++.|++ .+.+++.++..|+||||.|+..++ +.+++|+ .|++    ++.+|.+|+||||+|+.
T Consensus       194 L~---~A~~~g~~~iv~~Ll~-~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~----in~~d~~G~TpLh~A~~  263 (434)
T PHA02874        194 LH---NAAEYGDYACIKLLID-HGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNAS----INDQDIDGSTPLHHAIN  263 (434)
T ss_pred             HH---HHHHcCCHHHHHHHHh-CCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCC----CCCcCCCCCCHHHHHHh
Confidence            99   7778999999999998 889999999999999999999876 5666666 4666    89999999999999998


Q ss_pred             cC-cchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHH
Q 037168          225 KR-KDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       225 ~~-~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~  277 (466)
                      .+ +.++++.|                   +..+.+++.+|++|+||++++.+.
T Consensus       264 ~~~~~~iv~~L-------------------l~~gad~n~~d~~g~TpL~~A~~~  298 (434)
T PHA02874        264 PPCDIDIIDIL-------------------LYHKADISIKDNKGENPIDTAFKY  298 (434)
T ss_pred             cCCcHHHHHHH-------------------HHCcCCCCCCCCCCCCHHHHHHHh
Confidence            65 56676555                   335567899999999999998764

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.8e-33  Score=290.68  Aligned_cols=253  Identities=17%  Similarity=0.130  Sum_probs=169.7

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcC---CHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCc
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTK---KSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHA   79 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~   79 (466)
                      +++.+.+..++..+  .+++..+..|.||||+|+..|   +.++++.|++     .|++++.+|..|.||||+|+..|+.
T Consensus        24 ~~~~~~v~~Ll~~g--a~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~-----~Gadin~~~~~g~TpLh~A~~~~~~   96 (471)
T PHA03095         24 NVTVEEVRRLLAAG--ADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLE-----AGADVNAPERCGFTPLHLYLYNATT   96 (471)
T ss_pred             CCCHHHHHHHHHcC--CCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCc
Confidence            34556666666554  778888999999999999988   8999999998     5667888899999999999999853


Q ss_pred             HHHHHHHHHhCCCcccCcCCCCChHHHHHH--HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcH
Q 037168           80 LPVADKVLRKAPGLLGMRNNNGETALLRAA--RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCI  157 (466)
Q Consensus        80 ~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa--~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~  157 (466)
                      .++++.|+++ |++++.+|..|+||||+|+  ..++.+++++|++.       |++++.+|..|.||||+|+.. ..++.
T Consensus        97 ~~iv~lLl~~-ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~-------gad~~~~d~~g~tpL~~a~~~-~~~~~  167 (471)
T PHA03095         97 LDVIKLLIKA-GADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRK-------GADVNALDLYGMTPLAVLLKS-RNANV  167 (471)
T ss_pred             HHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHc-------CCCCCccCCCCCCHHHHHHHc-CCCCH
Confidence            4899888887 7789999999999999999  45678999999988       556666777777777754322 23456


Q ss_pred             HHHHHHHHHCCCcccccccCCChHHHHHHHc--CChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcch--hhhc
Q 037168          158 EIVKDILSVYPQAVEHIDDEGRNILHVAIKY--RQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDY--VAEK  233 (466)
Q Consensus       158 ~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~--~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~--~~~~  233 (466)
                      ++++.|++ .+.+++..|..|+||||.|+..  ++.++++.|+++|++    ++.+|..|+||||+|+..++..  +++.
T Consensus       168 ~iv~~Ll~-~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~----~~~~d~~g~tpLh~Aa~~~~~~~~~v~~  242 (471)
T PHA03095        168 ELLRLLID-AGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCD----PAATDMLGNTPLHSMATGSSCKRSLVLP  242 (471)
T ss_pred             HHHHHHHH-cCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCC----CcccCCCCCCHHHHHHhcCCchHHHHHH
Confidence            66666665 5555555566666666666553  445566666665555    5555555555555555544321  1111


Q ss_pred             cC--Chhhhhhh--------------HhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          234 ME--GPALLLQD--------------ELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       234 l~--~~~~~l~~--------------~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      +.  +.....+.              .....+.+  +..+.+++.+|.+|+||++++....
T Consensus       243 ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~L--L~~gad~n~~~~~g~tpl~~A~~~~  301 (471)
T PHA03095        243 LLIAGISINARNRYGQTPLHYAAVFNNPRACRRL--IALGADINAVSSDGNTPLSLMVRNN  301 (471)
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH--HHcCCCCcccCCCCCCHHHHHHHhC
Confidence            10  00000000              00000111  2356778999999999999987654

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.3e-33  Score=286.65  Aligned_cols=233  Identities=14%  Similarity=0.058  Sum_probs=203.0

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+.+..+.+|.||||+|+..|+.++++.|++     .|++++..+..|.||||.|+..|+. ++
T Consensus        12 ~g~~~iv~~Ll~~g--~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~~~t~L~~A~~~g~~-~~   83 (413)
T PHA02875         12 FGELDIARRLLDIG--INPNFEIYDGISPIKLAMKFRDSEAIKLLMK-----HGAIPDVKYPDIESELHDAVEEGDV-KA   83 (413)
T ss_pred             hCCHHHHHHHHHCC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHh-----CCCCccccCCCcccHHHHHHHCCCH-HH
Confidence            57777777777665  6778888899999999999999999999999     4556777888999999999999997 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD  162 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~  162 (466)
                      ++.|++.+....+..+.+|.||||+|+..|+.+++++|++.       |++++.++.+|.||||   .|+..|+.++++.
T Consensus        84 v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~-------gad~~~~~~~g~tpLh---~A~~~~~~~~v~~  153 (413)
T PHA02875         84 VEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR-------GADPDIPNTDKFSPLH---LAVMMGDIKGIEL  153 (413)
T ss_pred             HHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHH
Confidence            99999986655567788999999999999999999999998       6788899999999999   7778999999999


Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC-CchhhhhccCcchhhhccCChhhhh
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN-TIFHMAGIKRKDYVAEKMEGPALLL  241 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~-TpLHlAa~~~~~~~~~~l~~~~~~l  241 (466)
                      |++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++    ++..|.+|. ||+|+|+..++.++++.|..     
T Consensus       154 Ll~-~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~----~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~-----  223 (413)
T PHA02875        154 LID-HKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGAN----IDYFGKNGCVAALCYAIENNKIDIVRLFIK-----  223 (413)
T ss_pred             HHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----CCcCCCCCCchHHHHHHHcCCHHHHHHHHH-----
Confidence            998 8899999999999999999999999999999999998    888888875 89999999999999877732     


Q ss_pred             hhHhhHHhhhhhcCccccc---ccccCCCCChHHHHHHH
Q 037168          242 QDELLWYERVKSVTMPHFL---NHRNNMGFIPEELFAIA  277 (466)
Q Consensus       242 ~~~~~~~~~v~~~~~~~~~---~~~n~~g~Tp~~l~~~~  277 (466)
                                    .+.+.   ...+.++.||++++...
T Consensus       224 --------------~gad~n~~~~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        224 --------------RGADCNIMFMIEGEECTILDMICNM  248 (413)
T ss_pred             --------------CCcCcchHhhcCCCchHHHHHHHhh
Confidence                          22222   33467899999987643

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=100.00  E-value=1.5e-32  Score=272.00  Aligned_cols=209  Identities=22%  Similarity=0.230  Sum_probs=189.9

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCChHHHH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGETALLR  107 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~  107 (466)
                      .+-.+.|++.|..+.|+.|++.    .+.+++..|++|.|+||+||.+++. +++++|+++ ++++|..+ .-|.||||+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~----~g~~v~~~D~~g~tlLHWAAiNNrl-~v~r~li~~-gadvn~~gG~l~stPLHW  118 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVES----EGESVNNPDREGVTLLHWAAINNRL-DVARYLISH-GADVNAIGGVLGSTPLHW  118 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhh----cCcCCCCCCcCCccceeHHHHcCcH-HHHHHHHHc-CCCccccCCCCCCCcchH
Confidence            4668899999999999999994    2678899999999999999999997 999999999 77799988 778999999


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      |+++|+..+|++|+++       |++++.+|.+|.||+|   .|++.|++-++-++|. .+.++|.+|.+|+||||+|+.
T Consensus       119 Aar~G~~~vv~lLlqh-------GAdpt~~D~~G~~~lH---la~~~~~~~~vayll~-~~~d~d~~D~~grTpLmwAay  187 (600)
T KOG0509|consen  119 AARNGHISVVDLLLQH-------GADPTLKDKQGLTPLH---LAAQFGHTALVAYLLS-KGADIDLRDNNGRTPLMWAAY  187 (600)
T ss_pred             HHHcCcHHHHHHHHHc-------CCCCceecCCCCcHHH---HHHHhCchHHHHHHHH-hcccCCCcCCCCCCHHHHHHH
Confidence            9999999999999999       8899999999999999   8889999999999998 679999999999999999999


Q ss_pred             cCChhHHHHHHhcCccccccccccc-CCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCC
Q 037168          188 YRQLEIFERVVQMEIPLRRLVRKID-YNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNM  266 (466)
Q Consensus       188 ~~~~~iv~~Ll~~g~~~~~~~~~~d-~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~  266 (466)
                      +|....++.|++-|+.    ++..| ++|+||||+|+..|+..++.++.                   ..+.+.+..|.+
T Consensus       188 kg~~~~v~~LL~f~a~----~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~-------------------~g~~~~d~~~~~  244 (600)
T KOG0509|consen  188 KGFALFVRRLLKFGAS----LLLTDDNHGNTPLHWAVVGGNLTAVKLLL-------------------EGGADLDKTNTN  244 (600)
T ss_pred             hcccHHHHHHHHhccc----ccccccccCCchHHHHHhcCCcceEehhh-------------------hcCCcccccccC
Confidence            9998889999999988    78887 99999999999999998886442                   234456888999


Q ss_pred             CCChHHHHHHH
Q 037168          267 GFIPEELFAIA  277 (466)
Q Consensus       267 g~Tp~~l~~~~  277 (466)
                      |+||++++++.
T Consensus       245 g~tp~~LA~~~  255 (600)
T KOG0509|consen  245 GKTPFDLAQER  255 (600)
T ss_pred             CCCHHHHHHHh
Confidence            99999999776

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=2.9e-33  Score=284.38  Aligned_cols=206  Identities=13%  Similarity=0.094  Sum_probs=177.4

Q ss_pred             HHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC-cHHHHHH
Q 037168            7 QKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH-ALPVADK   85 (466)
Q Consensus         7 ~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~-~~~~v~~   85 (466)
                      .+++++|.+. +.+++..|.+|.||||+|++.|+.++|+.|++     +|++++.+|.+|.||||+|+..++ ..++++.
T Consensus        52 ~~iv~~Ll~~-Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~-----~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~l  125 (446)
T PHA02946         52 ERFVEELLHR-GYSPNETDDDGNYPLHIASKINNNRIVAMLLT-----HGADPNACDKQHKTPLYYLSGTDDEVIERINL  125 (446)
T ss_pred             HHHHHHHHHC-cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-----CcCCCCCCCCCCCCHHHHHHHcCCchHHHHHH
Confidence            3455555554 47889999999999999999999999999999     667789999999999999988664 2388999


Q ss_pred             HHHhCCCcccC-cCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHH
Q 037168           86 VLRKAPGLLGM-RNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDIL  164 (466)
Q Consensus        86 Ll~~~~~~~~~-~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll  164 (466)
                      |+++ +++++. .|.+|.|||| ||..|+.+++++|++.       +.+++.+|..|+||||+|+ +...++.++++.|+
T Consensus       126 Ll~~-Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~-------gad~~~~d~~G~t~Lh~A~-~~~~~~~~~v~~Ll  195 (446)
T PHA02946        126 LVQY-GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI-------GFEARIVDKFGKNHIHRHL-MSDNPKASTISWMM  195 (446)
T ss_pred             HHHc-CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc-------cccccccCCCCCCHHHHHH-HhcCCCHHHHHHHH
Confidence            9987 677774 6999999998 6778999999999998       6788999999999999764 44567789999999


Q ss_pred             HHCCCcccccccCCChHHHHHHHcC--ChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcc-hhhhcc
Q 037168          165 SVYPQAVEHIDDEGRNILHVAIKYR--QLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKD-YVAEKM  234 (466)
Q Consensus       165 ~~~~~~~~~~d~~G~t~Lh~A~~~~--~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~-~~~~~l  234 (466)
                      + .|++++.+|.+|+||||+|+.++  +.+++++|++ |++    +|.+|.+|+||||+|++.++. ++++.|
T Consensus       196 ~-~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gad----in~~d~~G~TpLh~A~~~~~~~~~~~~L  262 (446)
T PHA02946        196 K-LGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STD----VNKQNKFGDSPLTLLIKTLSPAHLINKL  262 (446)
T ss_pred             H-cCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCC----CCCCCCCCCCHHHHHHHhCChHHHHHHH
Confidence            8 89999999999999999999986  7899999985 777    999999999999999998774 566555

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.8e-33  Score=288.13  Aligned_cols=230  Identities=16%  Similarity=0.192  Sum_probs=181.2

Q ss_pred             chHHHHHHHHhCC--CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH-
Q 037168            5 DEQKVIELCRKVP--DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP-   81 (466)
Q Consensus         5 ~~~~v~~ll~~~~--~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~-   81 (466)
                      +.+.+.+.+....  +...+..+..+.||||.||+.|+.++|+.|++     .|++++.+|..|.||||+||..|+. + 
T Consensus        12 ~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~-----~gadvn~~d~~g~TpLh~A~~~g~~-~~   85 (477)
T PHA02878         12 NYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLT-----RGHNVNQPDHRDLTPLHIICKEPNK-LG   85 (477)
T ss_pred             cHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHCccH-hH
Confidence            3344555555421  11123345567888999999999999999988     4566788888889999988876553 3 


Q ss_pred             ---------------------------------------------------------------HHHHHHHhCCCcccCcC
Q 037168           82 ---------------------------------------------------------------VADKVLRKAPGLLGMRN   98 (466)
Q Consensus        82 ---------------------------------------------------------------~v~~Ll~~~~~~~~~~d   98 (466)
                                                                                     +++.|++. |++++.+|
T Consensus        86 v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~-gadin~~~  164 (477)
T PHA02878         86 MKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSY-GADINMKD  164 (477)
T ss_pred             HHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHc-CCCCCccC
Confidence                                                                           44444444 66778888


Q ss_pred             CC-CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccC
Q 037168           99 NN-GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE  177 (466)
Q Consensus        99 ~~-G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~  177 (466)
                      .+ |+||||+|+..|+.+++++|++.       |++++.+|..|.||||   .|+..|+.++++.|++ .|++++.+|..
T Consensus       165 ~~~g~tpLh~A~~~~~~~iv~~Ll~~-------gad~n~~d~~g~tpLh---~A~~~~~~~iv~~Ll~-~ga~in~~d~~  233 (477)
T PHA02878        165 RHKGNTALHYATENKDQRLTELLLSY-------GANVNIPDKTNNSPLH---HAVKHYNKPIVHILLE-NGASTDARDKC  233 (477)
T ss_pred             CCCCCCHHHHHHhCCCHHHHHHHHHC-------CCCCCCcCCCCCCHHH---HHHHhCCHHHHHHHHH-cCCCCCCCCCC
Confidence            88 99999999999999999999988       6778888999999999   6778899999999998 88999999999


Q ss_pred             CChHHHHHHHc-CChhHHHHHHhcCcccccccccccC-CCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcC
Q 037168          178 GRNILHVAIKY-RQLEIFERVVQMEIPLRRLVRKIDY-NGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVT  255 (466)
Q Consensus       178 G~t~Lh~A~~~-~~~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~  255 (466)
                      |+||||+|+.. ++.+++++|+++|++    +|.++. .|+||||+|+  ++.++++.|                   +.
T Consensus       234 g~TpLh~A~~~~~~~~iv~~Ll~~gad----vn~~~~~~g~TpLh~A~--~~~~~v~~L-------------------l~  288 (477)
T PHA02878        234 GNTPLHISVGYCKDYDILKLLLEHGVD----VNAKSYILGLTALHSSI--KSERKLKLL-------------------LE  288 (477)
T ss_pred             CCCHHHHHHHhcCCHHHHHHHHHcCCC----CCccCCCCCCCHHHHHc--cCHHHHHHH-------------------HH
Confidence            99999999976 689999999999988    888875 7999999994  445555444                   33


Q ss_pred             cccccccccCCCCChHHHHHHH
Q 037168          256 MPHFLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       256 ~~~~~~~~n~~g~Tp~~l~~~~  277 (466)
                      .+.+++..|.+|.||++++.+.
T Consensus       289 ~gadin~~d~~g~TpL~~A~~~  310 (477)
T PHA02878        289 YGADINSLNSYKLTPLSSAVKQ  310 (477)
T ss_pred             CCCCCCCcCCCCCCHHHHHHHH
Confidence            5667899999999999999764

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6e-33  Score=287.48  Aligned_cols=233  Identities=21%  Similarity=0.226  Sum_probs=196.8

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHH-----HHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHH--H
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHM-----ATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETA--T   75 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~-----A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa--~   75 (466)
                      .|+.+.|..++..+  .+++..+..|.||||+     |+..|+.++++.|++     .|++++..|..|.||||+|+  .
T Consensus        45 ~~~~~ivk~Ll~~g--~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~-----~ga~i~~~d~~g~tpL~~A~~~~  117 (480)
T PHA03100         45 ARNIDVVKILLDNG--ADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLE-----YGANVNAPDNNGITPLLYAISKK  117 (480)
T ss_pred             cCCHHHHHHHHHcC--CCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHH-----CCCCCCCCCCCCCchhhHHHhcc
Confidence            45556666666554  6677888888999999     999999999999998     45566788889999999999  8


Q ss_pred             cCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcC--CHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhh
Q 037168           76 SNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYG--KVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLH  153 (466)
Q Consensus        76 ~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~  153 (466)
                      .|+. ++++.|++. +++++.+|..|.||||+|+..|  +.+++++|++.       |.+++.+|..|.||||   .|+.
T Consensus       118 ~~~~-~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~-------g~din~~d~~g~tpL~---~A~~  185 (480)
T PHA03100        118 SNSY-SIVEYLLDN-GANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK-------GVDINAKNRYGYTPLH---IAVE  185 (480)
T ss_pred             cChH-HHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC-------CCCcccccCCCCCHHH---HHHH
Confidence            8886 899998887 6778889999999999999999  89999999988       6677888889999999   6667


Q ss_pred             cCcHHHHHHHHHHCCCcccccccCC------ChHHHHHHHcCC--hhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          154 FGCIEIVKDILSVYPQAVEHIDDEG------RNILHVAIKYRQ--LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       154 ~g~~~~v~~Ll~~~~~~~~~~d~~G------~t~Lh~A~~~~~--~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      .|+.++++.|++ .|++++..+..|      .||||.|+..|+  .+++++|+++|++    +|.+|..|+||||+|+..
T Consensus       186 ~~~~~iv~~Ll~-~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d----in~~d~~g~TpL~~A~~~  260 (480)
T PHA03100        186 KGNIDVIKFLLD-NGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVP----INIKDVYGFTPLHYAVYN  260 (480)
T ss_pred             hCCHHHHHHHHH-cCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHc
Confidence            889999999998 788888888888      899999999998  9999999999888    889999999999999999


Q ss_pred             CcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          226 RKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       226 ~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      ++.++++.|                   +..+.+++.+|.+|+||++++.+..
T Consensus       261 ~~~~iv~~L-------------------l~~gad~n~~d~~g~tpl~~A~~~~  294 (480)
T PHA03100        261 NNPEFVKYL-------------------LDLGANPNLVNKYGDTPLHIAILNN  294 (480)
T ss_pred             CCHHHHHHH-------------------HHcCCCCCccCCCCCcHHHHHHHhC
Confidence            988888666                   3345577999999999999998654

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=3.4e-32  Score=285.31  Aligned_cols=236  Identities=16%  Similarity=0.106  Sum_probs=188.1

Q ss_pred             HHHHHHHhCCCccccccCCCCCcHHHHHHHcCC--HHHHHHHHHhCCCCchhhhhccCCCCChHHHHHH-----------
Q 037168            8 KVIELCRKVPDHALYVFTIHDDTVLHMATYTKK--SDLVIKLLDELPDQSLDKMTRQNKAGNTILHETA-----------   74 (466)
Q Consensus         8 ~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa-----------   74 (466)
                      +++++|.+. +++++..|.+|.||||+|++.|+  .++|+.|++     +|++++.+|..|+||||+|+           
T Consensus       193 eIVklLLe~-GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe-----~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIv  266 (764)
T PHA02716        193 DILEWLCNN-GVNVNLQNNHLITPLHTYLITGNVCASVIKKIIE-----LGGDMDMKCVNGMSPIMTYIINIDNINPEIT  266 (764)
T ss_pred             HHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHhhhccCHHHH
Confidence            455555555 47888999999999999999985  589999999     56778899999999999753           


Q ss_pred             --------------------------HcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHH--cCCHHHHHHHHhccCC
Q 037168           75 --------------------------TSNHALPVADKVLRKAPGLLGMRNNNGETALLRAAR--YGKVDIFNFLAGKISG  126 (466)
Q Consensus        75 --------------------------~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~--~g~~~~v~~Ll~~~~~  126 (466)
                                                +.|+. ++++.|+++ |++++.+|.+|+||||+|+.  .++.+++++|++.   
T Consensus       267 kiLie~~d~n~~~~~~~~L~~~i~AA~~g~l-eiVklLLe~-GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~---  341 (764)
T PHA02716        267 NIYIESLDGNKVKNIPMILHSYITLARNIDI-SVVYSFLQP-GVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEY---  341 (764)
T ss_pred             HHHHHhccccccccchhhhHHHHHHHHcCCH-HHHHHHHhC-CCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHc---
Confidence                                      34564 888888887 77899999999999998764  4678999999988   


Q ss_pred             CCCCCcccccccCCCCChhhHHHHH-----------hhcCcHHHHHHHHHHCCCcccccccCCChHHHHH----HHcCCh
Q 037168          127 YDHATRLPFLHRNDKTNVLHIAILS-----------LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA----IKYRQL  191 (466)
Q Consensus       127 ~~~~~~~~~~~d~~g~TpLh~A~~a-----------~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A----~~~~~~  191 (466)
                          |++++.+|..|+||||+|+..           ...++.++++.|++ .|++++.+|..|+||||.+    ...++.
T Consensus       342 ----GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~-~GADIn~kn~~G~TPLh~y~~~a~n~~~~  416 (764)
T PHA02716        342 ----GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLIS-LGADITAVNCLGYTPLTSYICTAQNYMYY  416 (764)
T ss_pred             ----CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHH-CCCCCCCcCCCCCChHHHHHHHHHhcChH
Confidence                778899999999999965421           12478999999998 8999999999999999942    234678


Q ss_pred             hHHHHHHhcCccc---------------------------------------------------------ccccccccCC
Q 037168          192 EIFERVVQMEIPL---------------------------------------------------------RRLVRKIDYN  214 (466)
Q Consensus       192 ~iv~~Ll~~g~~~---------------------------------------------------------~~~~~~~d~~  214 (466)
                      +++++|++.|+..                                                         ....|.+|..
T Consensus       417 dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~  496 (764)
T PHA02716        417 DIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETS  496 (764)
T ss_pred             HHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCC
Confidence            9999998865310                                                         0013556889


Q ss_pred             CCCchhhhhccCcchhh-----hccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          215 GNTIFHMAGIKRKDYVA-----EKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       215 G~TpLHlAa~~~~~~~~-----~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      |+||||+|+..++.+++     +.|                   +..+.+++.+|++|+||+++|.+.+
T Consensus       497 G~TPLh~Aa~~g~~~~v~~e~~k~L-------------------L~~GADIN~~d~~G~TPLh~A~~~g  546 (764)
T PHA02716        497 GMTPLHVSIISHTNANIVMDSFVYL-------------------LSIQYNINIPTKNGVTPLMLTMRNN  546 (764)
T ss_pred             CCCHHHHHHHcCCccchhHHHHHHH-------------------HhCCCCCcccCCCCCCHHHHHHHcC
Confidence            99999999998876443     444                   3456778999999999999999765

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=8.3e-33  Score=278.41  Aligned_cols=217  Identities=21%  Similarity=0.252  Sum_probs=107.1

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHH
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA   83 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v   83 (466)
                      |+.+.+..++..+  .+++..|++|.||||+||..++.|..+.|++.+     +++...|.+|++|+|.|+++|.. ++.
T Consensus       132 ~~~s~L~~Ll~~~--~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~-----a~~~K~~~~~~~~iH~aa~s~s~-e~m  203 (929)
T KOG0510|consen  132 GNYSCLKLLLDYG--ADVNLEDENGFTPLHLAARKNKVEAKKELINKG-----ADPCKSDIDGNFPIHEAARSGSK-ECM  203 (929)
T ss_pred             chHHHHHHHHHhc--CCccccccCCCchhhHHHhcChHHHHHHHHhcC-----CCCCcccCcCCchHHHHHHhcch-hhh
Confidence            4444455444443  677777777777777777777777667777743     33444455555555555555543 444


Q ss_pred             HHHHHhC----CCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCC--------CcccccccCCCCChhhHHHHH
Q 037168           84 DKVLRKA----PGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHA--------TRLPFLHRNDKTNVLHIAILS  151 (466)
Q Consensus        84 ~~Ll~~~----~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~--------~~~~~~~d~~g~TpLh~A~~a  151 (466)
                      +..+.++    ...+|.-|.+|.||||.|+..|+.++++..++.+......        ...++..|++|.||||   +|
T Consensus       204 Ei~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH---~a  280 (929)
T KOG0510|consen  204 EIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLH---YA  280 (929)
T ss_pred             hhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHH---HH
Confidence            4444421    2234444444555555555555555555444443321110        1123334444455555   33


Q ss_pred             hhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168          152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA  231 (466)
Q Consensus       152 ~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~  231 (466)
                      ++.|+.+.++.|+. .|++++.+++++.||||.||.+|+...++.|++ ..+ .+++|..|..|+||||+|++.|+..++
T Consensus       281 ~r~G~~~svd~Ll~-~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~-~rllne~D~~g~tpLHlaa~~gH~~v~  357 (929)
T KOG0510|consen  281 ARQGGPESVDNLLG-FGASINSKNKDEESPLHFAAIYGRINTVERLLQ-ESD-TRLLNESDLHGMTPLHLAAKSGHDRVV  357 (929)
T ss_pred             HHcCChhHHHHHHH-cCCcccccCCCCCCchHHHHHcccHHHHHHHHh-CcC-ccccccccccCCCchhhhhhcCHHHHH
Confidence            44444444444444 444444444444444444444444444444444 111 223444444444444444444444444


Q ss_pred             hcc
Q 037168          232 EKM  234 (466)
Q Consensus       232 ~~l  234 (466)
                      ++|
T Consensus       358 qlL  360 (929)
T KOG0510|consen  358 QLL  360 (929)
T ss_pred             HHH
Confidence            443

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=6.5e-32  Score=283.18  Aligned_cols=211  Identities=16%  Similarity=0.138  Sum_probs=173.6

Q ss_pred             hHHHHHHHHhCCCcccccc-CCCCCcHHHHHHHc--CCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCc-HH
Q 037168            6 EQKVIELCRKVPDHALYVF-TIHDDTVLHMATYT--KKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHA-LP   81 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~~-~~~g~T~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~-~~   81 (466)
                      ..+++++|.+.+.++++.. |..|.||||.|+..  ++.+++++|++     +|++++.+|..|+||||+|++.|+. .+
T Consensus       154 ~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe-----~GADVN~kD~~G~TPLH~Aa~~g~~~~e  228 (764)
T PHA02716        154 DLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCN-----NGVNVNLQNNHLITPLHTYLITGNVCAS  228 (764)
T ss_pred             CHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCCCHH
Confidence            3445555555533678887 89999999998754  67899999999     6678999999999999999999863 48


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHH-------------------------------------HcCCHHHHHHHHhcc
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAA-------------------------------------RYGKVDIFNFLAGKI  124 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa-------------------------------------~~g~~~~v~~Ll~~~  124 (466)
                      +++.|+++ |++++.+|..|+||||+|+                                     +.|+.+++++|++. 
T Consensus       229 IVklLLe~-GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~-  306 (764)
T PHA02716        229 VIKKIIEL-GGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQP-  306 (764)
T ss_pred             HHHHHHHc-CCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhC-
Confidence            99999988 7889999999999999763                                     34666777777766 


Q ss_pred             CCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH--------------cCC
Q 037168          125 SGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK--------------YRQ  190 (466)
Q Consensus       125 ~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~--------------~~~  190 (466)
                            |++++.+|.+|+||||+|+ +...++.++++.|++ .|++++.+|..|+||||+|+.              .++
T Consensus       307 ------GAdIN~kD~~G~TPLH~Aa-a~~~~~~eIVklLLe-~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~  378 (764)
T PHA02716        307 ------GVKLHYKDSAGRTCLHQYI-LRHNISTDIIKLLHE-YGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIR  378 (764)
T ss_pred             ------CCceeccCCCCCCHHHHHH-HHhCCCchHHHHHHH-cCCCCccCCCCCCCHHHHHHHhhhhhccccccccccCh
Confidence                  6788999999999999663 335678999999998 899999999999999999875              368


Q ss_pred             hhHHHHHHhcCcccccccccccCCCCCchhhh----hccCcchhhhccC
Q 037168          191 LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA----GIKRKDYVAEKME  235 (466)
Q Consensus       191 ~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA----a~~~~~~~~~~l~  235 (466)
                      .+++++|+++|++    ++.+|..|+||||.+    ...+..++++.|.
T Consensus       379 ~eVVklLL~~GAD----In~kn~~G~TPLh~y~~~a~n~~~~dIvklLi  423 (764)
T PHA02716        379 LDVIQCLISLGAD----ITAVNCLGYTPLTSYICTAQNYMYYDIIDCLI  423 (764)
T ss_pred             HHHHHHHHHCCCC----CCCcCCCCCChHHHHHHHHHhcChHHHHHHHH
Confidence            9999999999999    999999999999942    2335566666653

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=7.7e-32  Score=273.95  Aligned_cols=226  Identities=16%  Similarity=0.131  Sum_probs=187.9

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHH--cCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATY--TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL   80 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~   80 (466)
                      +|+.+.+..++...       ....+.++||.++.  .++.++|+.|++     +|++++.+|.+|.||||+|+..|+. 
T Consensus        19 ~~n~~~~~~~l~~~-------~~~g~~~~Lh~~~~~~~~~~~iv~~Ll~-----~Gadvn~~d~~G~TpLh~Aa~~g~~-   85 (446)
T PHA02946         19 SKNLDVFRNMLQAI-------EPSGNYHILHAYCGIKGLDERFVEELLH-----RGYSPNETDDDGNYPLHIASKINNN-   85 (446)
T ss_pred             cCcHHHHHHHHhcc-------CCCCCChHHHHHHHhcCCCHHHHHHHHH-----CcCCCCccCCCCCCHHHHHHHcCCH-
Confidence            35556666666532       12234799998874  457899999999     5677899999999999999999996 


Q ss_pred             HHHHHHHHhCCCcccCcCCCCChHHHHHHHcCC--HHHHHHHHhccCCCCCCCccccc-ccCCCCChhhHHHHHhhcCcH
Q 037168           81 PVADKVLRKAPGLLGMRNNNGETALLRAARYGK--VDIFNFLAGKISGYDHATRLPFL-HRNDKTNVLHIAILSLHFGCI  157 (466)
Q Consensus        81 ~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~--~~~v~~Ll~~~~~~~~~~~~~~~-~d~~g~TpLh~A~~a~~~g~~  157 (466)
                      ++++.|+++ |++++.+|.+|+||||+|+..++  .+++++|+++       |++++. .|.+|.||||   . +..|+.
T Consensus        86 eiv~lLL~~-GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~-------Gadin~~~d~~g~tpL~---a-a~~~~~  153 (446)
T PHA02946         86 RIVAMLLTH-GADPNACDKQHKTPLYYLSGTDDEVIERINLLVQY-------GAKINNSVDEEGCGPLL---A-CTDPSE  153 (446)
T ss_pred             HHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHc-------CCCcccccCCCCCcHHH---H-HHCCCh
Confidence            999999997 78899999999999999998764  8999999998       566764 6889999998   2 346899


Q ss_pred             HHHHHHHHHCCCcccccccCCChHHHHHHHcCC--hhHHHHHHhcCcccccccccccCCCCCchhhhhccC--cchhhhc
Q 037168          158 EIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ--LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR--KDYVAEK  233 (466)
Q Consensus       158 ~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~--~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~--~~~~~~~  233 (466)
                      ++++.|++ .+++++.+|+.|+||||+|+..++  .+++++|+++|++    ++.+|.+|+||||+|+..+  +.+++++
T Consensus       154 ~vv~~Ll~-~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gad----in~~d~~G~TpLH~Aa~~~~~~~~iv~l  228 (446)
T PHA02946        154 RVFKKIMS-IGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGIS----PSKPDHDGNTPLHIVCSKTVKNVDIINL  228 (446)
T ss_pred             HHHHHHHh-ccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHcCCCcHHHHHH
Confidence            99999998 899999999999999999998665  5899999999999    9999999999999999876  4445543


Q ss_pred             cCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          234 MEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       234 l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      +                    .++.+++.+|++|+||++++.+..
T Consensus       229 L--------------------l~gadin~~d~~G~TpLh~A~~~~  253 (446)
T PHA02946        229 L--------------------LPSTDVNKQNKFGDSPLTLLIKTL  253 (446)
T ss_pred             H--------------------HcCCCCCCCCCCCCCHHHHHHHhC
Confidence            3                    124568999999999999998764

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=8.3e-32  Score=289.88  Aligned_cols=251  Identities=16%  Similarity=0.107  Sum_probs=184.4

Q ss_pred             hHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHH
Q 037168            6 EQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADK   85 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~   85 (466)
                      ..++.++|.+. +++++..|..|+||||+||+.|+.++|++|++     .|++++..+.+|.||||+|+..|+. ++++.
T Consensus       157 ~~~i~k~Ll~~-Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~-----~Gad~n~~~~~g~t~L~~A~~~~~~-~ivk~  229 (682)
T PHA02876        157 ELLIAEMLLEG-GADVNAKDIYCITPIHYAAERGNAKMVNLLLS-----YGADVNIIALDDLSVLECAVDSKNI-DTIKA  229 (682)
T ss_pred             cHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-----CCCCcCccCCCCCCHHHHHHHcCCH-HHHHH
Confidence            34455566655 47899999999999999999999999999999     4556777788888888888888775 77666


Q ss_pred             HHHh----------------------------CCCcccCcCCCCChHHHHHHHcCCH-HHHHHHHhccCCCCCCCccccc
Q 037168           86 VLRK----------------------------APGLLGMRNNNGETALLRAARYGKV-DIFNFLAGKISGYDHATRLPFL  136 (466)
Q Consensus        86 Ll~~----------------------------~~~~~~~~d~~G~tpLh~Aa~~g~~-~~v~~Ll~~~~~~~~~~~~~~~  136 (466)
                      |++.                            .+.+++..|..|.||||+|+..|+. +++++|++.       +++++.
T Consensus       230 Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~-------gadin~  302 (682)
T PHA02876        230 IIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLER-------GADVNA  302 (682)
T ss_pred             HHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHC-------CCCCCC
Confidence            5542                            2445777888888888888888875 577888877       567777


Q ss_pred             ccCCCCChhhHHHHHhhcC-cHHHHHHHHHHCCCcccccccCCChHHHHHHHc-CChhHHHHHHhcCcccccccccccCC
Q 037168          137 HRNDKTNVLHIAILSLHFG-CIEIVKDILSVYPQAVEHIDDEGRNILHVAIKY-RQLEIFERVVQMEIPLRRLVRKIDYN  214 (466)
Q Consensus       137 ~d~~g~TpLh~A~~a~~~g-~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~-~~~~iv~~Ll~~g~~~~~~~~~~d~~  214 (466)
                      +|.+|+||||   .|+..| +.++++.|++ .|++++.+|..|+||||+|+.. ++.+++++|++.|++    +|.+|..
T Consensus       303 ~d~~g~TpLh---~Aa~~g~~~~~v~~Ll~-~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gad----in~~d~~  374 (682)
T PHA02876        303 KNIKGETPLY---LMAKNGYDTENIRTLIM-LGADVNAADRLYITPLHQASTLDRNKDIVITLLELGAN----VNARDYC  374 (682)
T ss_pred             cCCCCCCHHH---HHHHhCCCHHHHHHHHH-cCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCC----CccCCCC
Confidence            8888888888   555666 5778887777 7788888888888888888875 467788888888877    7888888


Q ss_pred             CCCchhhhhccCcchhhhccCChhhhhh-------hHhhH-------Hhhhh-hcCcccccccccCCCCChHHHHHHHh
Q 037168          215 GNTIFHMAGIKRKDYVAEKMEGPALLLQ-------DELLW-------YERVK-SVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       215 G~TpLHlAa~~~~~~~~~~l~~~~~~l~-------~~~~~-------~~~v~-~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      |+||||+|+..++.++++.|...+....       ..+.+       ...++ -...+.+++.+|.+|+||+++|.+.+
T Consensus       375 G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~  453 (682)
T PHA02876        375 DKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN  453 (682)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence            8888888888888877766633221110       00000       00011 12356678999999999999998754

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=3e-32  Score=274.37  Aligned_cols=215  Identities=17%  Similarity=0.180  Sum_probs=176.2

Q ss_pred             hHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHH
Q 037168            6 EQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADK   85 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~   85 (466)
                      ++.+..++..+  ++....+.++.+|+|+|+..|+.++.+.|++     .+.+++..|..|.||||+||..++. |..+.
T Consensus       101 ~~~i~~Lls~g--ad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~-----~~~dvnl~de~~~TpLh~A~~~~~~-E~~k~  172 (929)
T KOG0510|consen  101 GDKIQVLLSYG--ADTPLRNLNKNAPLHLAADSGNYSCLKLLLD-----YGADVNLEDENGFTPLHLAARKNKV-EAKKE  172 (929)
T ss_pred             HHHHHHHHhcC--CCCChhhhhccCchhhccccchHHHHHHHHH-----hcCCccccccCCCchhhHHHhcChH-HHHHH
Confidence            45555555554  7888899999999999999999999999999     5678999999999999999999996 76666


Q ss_pred             HHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhc---------Cc
Q 037168           86 VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHF---------GC  156 (466)
Q Consensus        86 Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~---------g~  156 (466)
                      |++. ++++...|.+|.+|+|.|++.|..|+.+..+.+.+  ...+..++.-|+.|.||||.|+....-         |.
T Consensus       173 Li~~-~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g--~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~  249 (929)
T KOG0510|consen  173 LINK-GADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHG--YERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGK  249 (929)
T ss_pred             HHhc-CCCCCcccCcCCchHHHHHHhcchhhhhhhhcccc--chhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCcc
Confidence            6666 88899999999999999999999999999998322  122678899999999999999753321         11


Q ss_pred             HHHHHH--HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          157 IEIVKD--ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       157 ~~~v~~--Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      ...-..  -.......++..|++|.||||+|++.|+.+.++.|+..|++    ++.+++++.||||.||+.|+.++++.|
T Consensus       250 ~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~----I~~kn~d~~spLH~AA~yg~~ntv~rL  325 (929)
T KOG0510|consen  250 KIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS----INSKNKDEESPLHFAAIYGRINTVERL  325 (929)
T ss_pred             ccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc----ccccCCCCCCchHHHHHcccHHHHHHH
Confidence            100000  01112234678899999999999999999999999999999    999999999999999999999998766


Q ss_pred             C
Q 037168          235 E  235 (466)
Q Consensus       235 ~  235 (466)
                      .
T Consensus       326 L  326 (929)
T KOG0510|consen  326 L  326 (929)
T ss_pred             H
Confidence            3

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.97  E-value=3.5e-31  Score=268.91  Aligned_cols=211  Identities=15%  Similarity=0.083  Sum_probs=185.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR  107 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~  107 (466)
                      .+++||.|++.|+.++++.|++     .|.+++.++..|.||||+|+..|+. ++++.|++. |++++..+.+|.||||.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~-----~g~~~n~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~~~t~L~~   74 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLD-----IGINPNFEIYDGISPIKLAMKFRDS-EAIKLLMKH-GAIPDVKYPDIESELHD   74 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHH-----CCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHhC-CCCccccCCCcccHHHH
Confidence            5799999999999999999999     5567788899999999999999997 999999998 67788889999999999


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      |+..|+.+++++|++.+.      ...+..+.+|+||||   .|+..|+.++++.|++ .|++++.+|..|+||||+|+.
T Consensus        75 A~~~g~~~~v~~Ll~~~~------~~~~~~~~~g~tpL~---~A~~~~~~~iv~~Ll~-~gad~~~~~~~g~tpLh~A~~  144 (413)
T PHA02875         75 AVEEGDVKAVEELLDLGK------FADDVFYKDGMTPLH---LATILKKLDIMKLLIA-RGADPDIPNTDKFSPLHLAVM  144 (413)
T ss_pred             HHHCCCHHHHHHHHHcCC------cccccccCCCCCHHH---HHHHhCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHH
Confidence            999999999999999843      122345678999999   7778999999999999 899999999999999999999


Q ss_pred             cCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCC
Q 037168          188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMG  267 (466)
Q Consensus       188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g  267 (466)
                      .|+.+++++|+++|++    ++.+|..|+||||+|+..|+.++++.|                   +..+.+++..+.+|
T Consensus       145 ~~~~~~v~~Ll~~g~~----~~~~d~~g~TpL~~A~~~g~~eiv~~L-------------------l~~ga~~n~~~~~~  201 (413)
T PHA02875        145 MGDIKGIELLIDHKAC----LDIEDCCGCTPLIIAMAKGDIAICKML-------------------LDSGANIDYFGKNG  201 (413)
T ss_pred             cCCHHHHHHHHhcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HhCCCCCCcCCCCC
Confidence            9999999999999988    899999999999999999999988766                   23445567777777


Q ss_pred             C-ChHHHHHHHh
Q 037168          268 F-IPEELFAIAN  278 (466)
Q Consensus       268 ~-Tp~~l~~~~~  278 (466)
                      . ||++++.+..
T Consensus       202 ~~t~l~~A~~~~  213 (413)
T PHA02875        202 CVAALCYAIENN  213 (413)
T ss_pred             CchHHHHHHHcC
Confidence            5 7888776543

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.97  E-value=5.4e-31  Score=272.14  Aligned_cols=203  Identities=15%  Similarity=0.120  Sum_probs=176.1

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCC----------------------------
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQ----------------------------   54 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~----------------------------   54 (466)
                      .|+.+.|..++..+  ++++..|.+|.||||+||..|+.+.++.|++.+...                            
T Consensus        47 ~g~~e~vk~Ll~~g--advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~  124 (477)
T PHA02878         47 ARNLDVVKSLLTRG--HNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNR  124 (477)
T ss_pred             cCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCc
Confidence            46777777777654  788999999999999999998888777777542110                            


Q ss_pred             -------------------------------chhhhhccCCC-CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168           55 -------------------------------SLDKMTRQNKA-GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE  102 (466)
Q Consensus        55 -------------------------------~~~~~~~~d~~-G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~  102 (466)
                                                     +|++++.+|.. |.||||+|+..|+. ++++.|++. +++++.+|..|.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~-~iv~~Ll~~-gad~n~~d~~g~  202 (477)
T PHA02878        125 YKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQ-RLTELLLSY-GANVNIPDKTNN  202 (477)
T ss_pred             ccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCH-HHHHHHHHC-CCCCCCcCCCCC
Confidence                                           24556777888 99999999999997 999999998 788999999999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhh-cCcHHHHHHHHHHCCCccccccc-CCCh
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLH-FGCIEIVKDILSVYPQAVEHIDD-EGRN  180 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~-~g~~~~v~~Ll~~~~~~~~~~d~-~G~t  180 (466)
                      ||||+|++.|+.+++++|++.       |++++.+|..|+||||+   |+. .++.++++.|++ .|++++.++. .|+|
T Consensus       203 tpLh~A~~~~~~~iv~~Ll~~-------ga~in~~d~~g~TpLh~---A~~~~~~~~iv~~Ll~-~gadvn~~~~~~g~T  271 (477)
T PHA02878        203 SPLHHAVKHYNKPIVHILLEN-------GASTDARDKCGNTPLHI---SVGYCKDYDILKLLLE-HGVDVNAKSYILGLT  271 (477)
T ss_pred             CHHHHHHHhCCHHHHHHHHHc-------CCCCCCCCCCCCCHHHH---HHHhcCCHHHHHHHHH-cCCCCCccCCCCCCC
Confidence            999999999999999999998       67888999999999994   444 478999999998 8999999886 7999


Q ss_pred             HHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccC
Q 037168          181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR  226 (466)
Q Consensus       181 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~  226 (466)
                      |||+|  .++.+++++|+++|++    +|.+|.+|+||||+|++.+
T Consensus       272 pLh~A--~~~~~~v~~Ll~~gad----in~~d~~g~TpL~~A~~~~  311 (477)
T PHA02878        272 ALHSS--IKSERKLKLLLEYGAD----INSLNSYKLTPLSSAVKQY  311 (477)
T ss_pred             HHHHH--ccCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHHc
Confidence            99999  5678999999999999    9999999999999999754

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.97  E-value=7.8e-31  Score=282.32  Aligned_cols=220  Identities=18%  Similarity=0.085  Sum_probs=194.1

Q ss_pred             CccccccCCCCCcHHHHHHHcCCH-HHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccC
Q 037168           18 DHALYVFTIHDDTVLHMATYTKKS-DLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGM   96 (466)
Q Consensus        18 ~~~~~~~~~~g~T~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~   96 (466)
                      +.+++..|..|.||||+|+..|+. ++++.|++     .+++++.+|..|.||||+|+..|...++++.|+.. +++++.
T Consensus       263 g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~-----~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~-gadin~  336 (682)
T PHA02876        263 GFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLE-----RGADVNAKNIKGETPLYLMAKNGYDTENIRTLIML-GADVNA  336 (682)
T ss_pred             CCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHc-CCCCCC
Confidence            366788899999999999999996 68999998     56678899999999999999999545899988887 788999


Q ss_pred             cCCCCChHHHHHHHc-CCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168           97 RNNNGETALLRAARY-GKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID  175 (466)
Q Consensus        97 ~d~~G~tpLh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d  175 (466)
                      +|..|.||||+|+.. ++.++++.|++.       +++++.+|..|+||||   .|+..|+.++++.|++ ++++++..+
T Consensus       337 ~d~~g~TpLh~A~~~~~~~~iv~lLl~~-------gadin~~d~~G~TpLh---~Aa~~~~~~iv~~Ll~-~gad~~~~~  405 (682)
T PHA02876        337 ADRLYITPLHQASTLDRNKDIVITLLEL-------GANVNARDYCDKTPIH---YAAVRNNVVIINTLLD-YGADIEALS  405 (682)
T ss_pred             cccCCCcHHHHHHHhCCcHHHHHHHHHc-------CCCCccCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCccccC
Confidence            999999999999986 578899999988       7789999999999999   7778999999999998 899999999


Q ss_pred             cCCChHHHHHHHcCC-hhHHHHHHhcCcccccccccccCCCCCchhhhhccC-cchhhhccCChhhhhhhHhhHHhhhhh
Q 037168          176 DEGRNILHVAIKYRQ-LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR-KDYVAEKMEGPALLLQDELLWYERVKS  253 (466)
Q Consensus       176 ~~G~t~Lh~A~~~~~-~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~-~~~~~~~l~~~~~~l~~~~~~~~~v~~  253 (466)
                      ..|.||||+|+..++ ..++++|+++|++    +|.+|.+|+||||+|+..+ +.+++++|                   
T Consensus       406 ~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad----in~~d~~G~TpLh~Aa~~~~~~~iv~lL-------------------  462 (682)
T PHA02876        406 QKIGTALHFALCGTNPYMSVKTLIDRGAN----VNSKNKDLSTPLHYACKKNCKLDVIEML-------------------  462 (682)
T ss_pred             CCCCchHHHHHHcCCHHHHHHHHHhCCCC----CCcCCCCCChHHHHHHHhCCcHHHHHHH-------------------
Confidence            999999999998766 5679999999998    9999999999999999876 56777666                   


Q ss_pred             cCcccccccccCCCCChHHHHHHH
Q 037168          254 VTMPHFLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       254 ~~~~~~~~~~n~~g~Tp~~l~~~~  277 (466)
                      +..+.+++.+|.+|.||++++.+.
T Consensus       463 l~~Gad~n~~d~~g~tpl~~a~~~  486 (682)
T PHA02876        463 LDNGADVNAINIQNQYPLLIALEY  486 (682)
T ss_pred             HHCCCCCCCCCCCCCCHHHHHHHh
Confidence            345667899999999999998753

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.97  E-value=1.3e-31  Score=265.21  Aligned_cols=200  Identities=22%  Similarity=0.250  Sum_probs=184.3

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccC-CCCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~~   81 (466)
                      .|+.+.|+++++.. +..++..|.+|-|+||+||.+++.+++++||+     +++++|..+ .-|.||||+|+++|+. .
T Consensus        54 ~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~-----~gadvn~~gG~l~stPLHWAar~G~~-~  126 (600)
T KOG0509|consen   54 YGELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLIS-----HGADVNAIGGVLGSTPLHWAARNGHI-S  126 (600)
T ss_pred             cchHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHH-----cCCCccccCCCCCCCcchHHHHcCcH-H
Confidence            58999999999986 57788999999999999999999999999999     667788887 7789999999999997 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVK  161 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~  161 (466)
                      +|+.|+++ |++++.+|.+|.||||+|++.|+.-.+-+|+.+       +.+++.+|.+|+||||   .|+..|+...+.
T Consensus       127 vv~lLlqh-GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~-------~~d~d~~D~~grTpLm---wAaykg~~~~v~  195 (600)
T KOG0509|consen  127 VVDLLLQH-GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSK-------GADIDLRDNNGRTPLM---WAAYKGFALFVR  195 (600)
T ss_pred             HHHHHHHc-CCCCceecCCCCcHHHHHHHhCchHHHHHHHHh-------cccCCCcCCCCCCHHH---HHHHhcccHHHH
Confidence            99999998 899999999999999999999999999999998       6789999999999999   778889888899


Q ss_pred             HHHHHCCCcccccc-cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          162 DILSVYPQAVEHID-DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       162 ~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      .||+ .++.++.+| +.|+||||+|+..|+.+++.+|++-|++    .+.+|.+|.||+.+|...
T Consensus       196 ~LL~-f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~----~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  196 RLLK-FGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGAD----LDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHH-hcccccccccccCCchHHHHHhcCCcceEehhhhcCCc----ccccccCCCCHHHHHHHh
Confidence            9998 888888888 8999999999999999999977777777    888999999999999876

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.97  E-value=7.8e-31  Score=271.87  Aligned_cols=237  Identities=12%  Similarity=0.103  Sum_probs=186.5

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHc--CCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC---
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYT--KKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH---   78 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~---   78 (466)
                      .+.+.+..++..+  ++++.. .+|.||||.++..  ++.++|+.|++     +|++++.++ .|.||||.|+..+.   
T Consensus        14 ~~~~~v~~LL~~G--advN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~-----~GAdvn~~~-~~~tpL~~a~~~~~~~~   84 (494)
T PHA02989         14 VDKNALEFLLRTG--FDVNEE-YRGNSILLLYLKRKDVKIKIVKLLID-----NGADVNYKG-YIETPLCAVLRNREITS   84 (494)
T ss_pred             CcHHHHHHHHHcC--CCcccc-cCCCCHHHHHHhcCCCChHHHHHHHH-----cCCCccCCC-CCCCcHHHHHhccCcch
Confidence            3455566555554  667776 5788998776654  36899999999     556677765 57899998887543   


Q ss_pred             --cHHHHHHHHHhCCCcccCcCCCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCccc-ccccCCCCChhhHHHHHh
Q 037168           79 --ALPVADKVLRKAPGLLGMRNNNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLP-FLHRNDKTNVLHIAILSL  152 (466)
Q Consensus        79 --~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~-~~~d~~g~TpLh~A~~a~  152 (466)
                        ..++++.|+++ |++++.+|.+|.||||.|+..   |+.+++++|+++       |+++ +.+|..|+||||+|+ +.
T Consensus        85 ~~~~~iv~~Ll~~-Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-------Gadin~~~d~~g~tpLh~a~-~~  155 (494)
T PHA02989         85 NKIKKIVKLLLKF-GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK-------GINVNDVKNSRGYNLLHMYL-ES  155 (494)
T ss_pred             hhHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC-------CCCcccccCCCCCCHHHHHH-Hh
Confidence              13789988887 788999999999999988765   678999999998       6788 788899999999653 23


Q ss_pred             hcCcHHHHHHHHHHCCCcccc-cccCCChHHHHHHHcC----ChhHHHHHHhcCccccc---------------------
Q 037168          153 HFGCIEIVKDILSVYPQAVEH-IDDEGRNILHVAIKYR----QLEIFERVVQMEIPLRR---------------------  206 (466)
Q Consensus       153 ~~g~~~~v~~Ll~~~~~~~~~-~d~~G~t~Lh~A~~~~----~~~iv~~Ll~~g~~~~~---------------------  206 (466)
                      ..++.++++.|++ .|++++. .|..|.||||+|+.++    +.+++++|+++|++.+.                     
T Consensus       156 ~~~~~~iv~~Ll~-~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~  234 (494)
T PHA02989        156 FSVKKDVIKILLS-FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSK  234 (494)
T ss_pred             ccCCHHHHHHHHH-cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcc
Confidence            4578999999998 7888887 6788999999988764    78999999998876321                     


Q ss_pred             -------------ccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHH
Q 037168          207 -------------LVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEEL  273 (466)
Q Consensus       207 -------------~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l  273 (466)
                                   .+|.+|..|+||||+|+..++.++++.|                   +..+.+++.+|.+|.||+++
T Consensus       235 ~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~L-------------------L~~Gadin~~d~~G~TpL~~  295 (494)
T PHA02989        235 KEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYL-------------------LKLGDDIYNVSKDGDTVLTY  295 (494)
T ss_pred             cchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHH-------------------HHcCCCccccCCCCCCHHHH
Confidence                         2467788899999999999888888666                   34566789999999999999


Q ss_pred             HHHHh
Q 037168          274 FAIAN  278 (466)
Q Consensus       274 ~~~~~  278 (466)
                      +.+..
T Consensus       296 A~~~~  300 (494)
T PHA02989        296 AIKHG  300 (494)
T ss_pred             HHHcC
Confidence            98754

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.97  E-value=4.2e-31  Score=273.70  Aligned_cols=219  Identities=20%  Similarity=0.217  Sum_probs=198.2

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHH-----HHHcCCcHHHHHHHHHhCCCc
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHE-----TATSNHALPVADKVLRKAPGL   93 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~-----Aa~~g~~~~~v~~Ll~~~~~~   93 (466)
                      ...+..+..+.||||.|++.|+.++|+.|++     +|++++..+..|.||||+     |+..|+. ++++.|++. |++
T Consensus        26 ~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~-----~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~-~iv~~Ll~~-ga~   98 (480)
T PHA03100         26 DLNDYSYKKPVLPLYLAKEARNIDVVKILLD-----NGADINSSTKNNSTPLHYLSNIKYNLTDVK-EIVKLLLEY-GAN   98 (480)
T ss_pred             ccchhhhcccchhhhhhhccCCHHHHHHHHH-----cCCCCCCccccCcCHHHHHHHHHHHhhchH-HHHHHHHHC-CCC
Confidence            5566778899999999999999999999999     556788889999999999     9999996 999999998 677


Q ss_pred             ccCcCCCCChHHHHHH--HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcC--cHHHHHHHHHHCCC
Q 037168           94 LGMRNNNGETALLRAA--RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG--CIEIVKDILSVYPQ  169 (466)
Q Consensus        94 ~~~~d~~G~tpLh~Aa--~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g--~~~~v~~Ll~~~~~  169 (466)
                      ++..|..|.||||+|+  ..|+.+++++|++.       |.+++.+|.+|.||||   .|+..|  +.++++.|++ .|.
T Consensus        99 i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~iv~~Ll~-~g~  167 (480)
T PHA03100         99 VNAPDNNGITPLLYAISKKSNSYSIVEYLLDN-------GANVNIKNSDGENLLH---LYLESNKIDLKILKLLID-KGV  167 (480)
T ss_pred             CCCCCCCCCchhhHHHhcccChHHHHHHHHHc-------CCCCCccCCCCCcHHH---HHHHcCCChHHHHHHHHH-CCC
Confidence            8999999999999999  99999999999998       6788889999999999   667888  9999999998 899


Q ss_pred             cccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCC------CCchhhhhccCc--chhhhccCChhhhh
Q 037168          170 AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG------NTIFHMAGIKRK--DYVAEKMEGPALLL  241 (466)
Q Consensus       170 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G------~TpLHlAa~~~~--~~~~~~l~~~~~~l  241 (466)
                      +++.+|..|+||||+|+..|+.+++++|+++|++    ++..|..|      .||||.|+..++  .++++.|       
T Consensus       168 din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~----~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~L-------  236 (480)
T PHA03100        168 DINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGAD----INAGDIETLLFTIFETPLHIAACYNEITLEVVNYL-------  236 (480)
T ss_pred             CcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCC----ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHH-------
Confidence            9999999999999999999999999999999998    88899999      999999999998  7777665       


Q ss_pred             hhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          242 QDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       242 ~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                                  +..+.+++.+|.+|.||++.|....
T Consensus       237 ------------l~~g~din~~d~~g~TpL~~A~~~~  261 (480)
T PHA03100        237 ------------LSYGVPINIKDVYGFTPLHYAVYNN  261 (480)
T ss_pred             ------------HHcCCCCCCCCCCCCCHHHHHHHcC
Confidence                        2344567889999999999998754

>PHA02791 ankyrin-like protein; Provisional

Probab=99.97  E-value=1.2e-30  Score=248.10  Aligned_cols=197  Identities=16%  Similarity=0.215  Sum_probs=166.6

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  ++.+..  +|+||||+|+..|+.++++.|++     ++++++.+|..|+||||+|+..|+. ++
T Consensus        40 ~g~~eiv~~Ll~~g--a~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~-----~Gadvn~~d~~G~TpLh~Aa~~g~~-ei  109 (284)
T PHA02791         40 DNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLEDTKIVKILLF-----SGMDDSQFDDKGNTALYYAVDSGNM-QT  109 (284)
T ss_pred             cCCHHHHHHHHHCc--CCCcCC--CCCCHHHHHHHCCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-HH
Confidence            35555555555544  444443  47899999999999999999999     5667889999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCC-hHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCcHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGE-TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGCIEIV  160 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~-tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v  160 (466)
                      ++.|+++ +++++.++..|+ ||||+|+..|+.+++++|+++++         +..| ..|.||||   .|+..|+.+++
T Consensus       110 vk~Ll~~-gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~---------~~~d~~~g~TpLh---~Aa~~g~~eiv  176 (284)
T PHA02791        110 VKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP---------STFDLAILLSCIH---ITIKNGHVDMM  176 (284)
T ss_pred             HHHHHHC-CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCC---------cccccccCccHHH---HHHHcCCHHHH
Confidence            9999988 677888999885 99999999999999999998733         1123 35899999   78899999999


Q ss_pred             HHHHHHCCCcccccccCCChH-HHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          161 KDILSVYPQAVEHIDDEGRNI-LHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       161 ~~Ll~~~~~~~~~~d~~G~t~-Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +.|++ ++++++.+|..|.|| ||+|+.+|+.+++++|+++|++    +|.+|.+| |||      +..|++++|
T Consensus       177 ~lLL~-~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~----in~~~~~~-~~l------~~~e~~~~l  239 (284)
T PHA02791        177 ILLLD-YMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDIN----IYSVNLEN-VLL------DDAEIAKMI  239 (284)
T ss_pred             HHHHH-CCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCC----CccCcccC-ccC------CCHHHHHHH
Confidence            99999 899999999999987 9999999999999999999999    89999955 777      555666555

>PHA02798 ankyrin-like protein; Provisional

Probab=99.97  E-value=2e-30  Score=268.49  Aligned_cols=233  Identities=13%  Similarity=0.083  Sum_probs=190.8

Q ss_pred             HHHHHHHHhCCCccccccCCCCCcHHHHHHHc-----CCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC--c
Q 037168            7 QKVIELCRKVPDHALYVFTIHDDTVLHMATYT-----KKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH--A   79 (466)
Q Consensus         7 ~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~-----g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~--~   79 (466)
                      .+++++|.+. +++++..|..|.||||.|+.+     ++.++++.|++     +|++++.+|..|+||||+|+..+.  .
T Consensus        51 ~~iv~~Ll~~-Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~-----~GadiN~~d~~G~TpLh~a~~~~~~~~  124 (489)
T PHA02798         51 TDIVKLFINL-GANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIE-----NGADINKKNSDGETPLYCLLSNGYINN  124 (489)
T ss_pred             HHHHHHHHHC-CCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHH-----CCCCCCCCCCCcCcHHHHHHHcCCcCh
Confidence            4555555555 478888999999999998864     67899999999     667789999999999999998762  2


Q ss_pred             HHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCC---HHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHH-hhc
Q 037168           80 LPVADKVLRKAPGLLGMRNNNGETALLRAARYGK---VDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILS-LHF  154 (466)
Q Consensus        80 ~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a-~~~  154 (466)
                      .+++++|+++ |++++.+|.+|.||||+|++.|+   .+++++|++.       |++++.++ ..|.||||+++.. ...
T Consensus       125 ~~iv~~Ll~~-Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~-------gadin~~~~~~~~t~Lh~~~~~~~~~  196 (489)
T PHA02798        125 LEILLFMIEN-GADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK-------GVDINTHNNKEKYDTLHCYFKYNIDR  196 (489)
T ss_pred             HHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh-------CCCcccccCcCCCcHHHHHHHhcccc
Confidence            4899999987 78899999999999999999887   8999999998       66777764 4688999965432 245


Q ss_pred             CcHHHHHHHHHHCCCcccccccCCChHHH-------HHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          155 GCIEIVKDILSVYPQAVEHIDDEGRNILH-------VAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       155 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh-------~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      ++.++++.|++ .|++++..|..|+++++       .+...++.+++++|++ +++    +|.+|..|+||||+|+..++
T Consensus       197 ~~~~ivk~Li~-~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~d----vN~~d~~G~TPL~~A~~~~~  270 (489)
T PHA02798        197 IDADILKLFVD-NGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YID----INQVDELGFNPLYYSVSHNN  270 (489)
T ss_pred             CCHHHHHHHHH-CCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCC----CCCcCcCCccHHHHHHHcCc
Confidence            68999999998 88899998988998877       2344567788888776 467    99999999999999999999


Q ss_pred             chhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          228 DYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       228 ~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      .++++.|                   +..+.+++.+|.+|+||++++.+.+
T Consensus       271 ~~~v~~L-------------------L~~GAdin~~d~~G~TpL~~A~~~~  302 (489)
T PHA02798        271 RKIFEYL-------------------LQLGGDINIITELGNTCLFTAFENE  302 (489)
T ss_pred             HHHHHHH-------------------HHcCCcccccCCCCCcHHHHHHHcC
Confidence            9888777                   4456778999999999999998754

>PHA03095 ankyrin-like protein; Provisional

Probab=99.97  E-value=2.8e-30  Score=266.84  Aligned_cols=213  Identities=16%  Similarity=0.153  Sum_probs=169.7

Q ss_pred             hHHHHHHHHhCCCccccccCCCCCcHHHHHHHcC-CHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHH--HcCCcHHH
Q 037168            6 EQKVIELCRKVPDHALYVFTIHDDTVLHMATYTK-KSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETA--TSNHALPV   82 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa--~~g~~~~~   82 (466)
                      ..+++++|.+. +++++..|..|.||||+|+..| +.++++.|++     +|++++.+|..|+||||+|+  ..++. ++
T Consensus        62 ~~~iv~~Ll~~-Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~-----~ga~in~~~~~g~tpLh~a~~~~~~~~-~i  134 (471)
T PHA03095         62 VKDIVRLLLEA-GADVNAPERCGFTPLHLYLYNATTLDVIKLLIK-----AGADVNAKDKVGRTPLHVYLSGFNINP-KV  134 (471)
T ss_pred             hHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHhhCCcCCH-HH
Confidence            44555555554 4789999999999999999999 5999999999     56778999999999999999  44564 89


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcC--CHHHHHHHHhccCCCC----------------------------CCCc
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYG--KVDIFNFLAGKISGYD----------------------------HATR  132 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~----------------------------~~~~  132 (466)
                      ++.|++. +++++.+|..|.||||+|+..+  +.+++++|++.+.+..                            ..|.
T Consensus       135 v~~Ll~~-gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~  213 (471)
T PHA03095        135 IRLLLRK-GADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGC  213 (471)
T ss_pred             HHHHHHc-CCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCC
Confidence            9999988 7789999999999999998876  6789999998754221                            0245


Q ss_pred             ccccccCCCCChhhHHHHHhhcCcH--HHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCccccccccc
Q 037168          133 LPFLHRNDKTNVLHIAILSLHFGCI--EIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK  210 (466)
Q Consensus       133 ~~~~~d~~g~TpLh~A~~a~~~g~~--~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~  210 (466)
                      +++.+|..|+||||   .|+..|+.  .+++.+++ .+.++|.+|..|+||||+|+..|+.+++++|+++|++    ++.
T Consensus       214 ~~~~~d~~g~tpLh---~Aa~~~~~~~~~v~~ll~-~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad----~n~  285 (471)
T PHA03095        214 DPAATDMLGNTPLH---SMATGSSCKRSLVLPLLI-AGISINARNRYGQTPLHYAAVFNNPRACRRLIALGAD----INA  285 (471)
T ss_pred             CCcccCCCCCCHHH---HHHhcCCchHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----Ccc
Confidence            56667777777777   44455543  46666776 7888888888888888888888888888888888888    888


Q ss_pred             ccCCCCCchhhhhccCcchhhhcc
Q 037168          211 IDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       211 ~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +|.+|+||||+|+..++.++++.+
T Consensus       286 ~~~~g~tpl~~A~~~~~~~~v~~L  309 (471)
T PHA03095        286 VSSDGNTPLSLMVRNNNGRAVRAA  309 (471)
T ss_pred             cCCCCCCHHHHHHHhCCHHHHHHH
Confidence            888888888888888888877665

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.97  E-value=7.4e-30  Score=233.86  Aligned_cols=182  Identities=13%  Similarity=0.141  Sum_probs=159.5

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcC--CcHHHHHHHHHhCCCcccCcC-
Q 037168           22 YVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSN--HALPVADKVLRKAPGLLGMRN-   98 (466)
Q Consensus        22 ~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g--~~~~~v~~Ll~~~~~~~~~~d-   98 (466)
                      +...+.+.||||.|+..|+.+.|+.|++.        ++..|..|.||||+|+..+  +. +++++|+++ +++++.++ 
T Consensus        15 ~~~~~~~~~pL~~A~~~~~~~~vk~Li~~--------~n~~~~~g~TpLh~a~~~~~~~~-eiv~~Ll~~-gadvn~~~~   84 (209)
T PHA02859         15 DYLFYRYCNPLFYYVEKDDIEGVKKWIKF--------VNDCNDLYETPIFSCLEKDKVNV-EILKFLIEN-GADVNFKTR   84 (209)
T ss_pred             HHHhhccCcHHHHHHHhCcHHHHHHHHHh--------hhccCccCCCHHHHHHHcCCCCH-HHHHHHHHC-CCCCCccCC
Confidence            34466789999999999999999999973        4567899999999999855  65 999999998 77899987 


Q ss_pred             CCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168           99 NNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID  175 (466)
Q Consensus        99 ~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d  175 (466)
                      ..|+||||+|+..   ++.+++++|+++       +++++.+|.+|.||||+|+ +...++.++++.|++ .+.+++.+|
T Consensus        85 ~~g~TpLh~a~~~~~~~~~eiv~~Ll~~-------gadin~~d~~G~TpLh~a~-~~~~~~~~iv~~Li~-~gadin~~d  155 (209)
T PHA02859         85 DNNLSALHHYLSFNKNVEPEILKILIDS-------GSSITEEDEDGKNLLHMYM-CNFNVRINVIKLLID-SGVSFLNKD  155 (209)
T ss_pred             CCCCCHHHHHHHhCccccHHHHHHHHHC-------CCCCCCcCCCCCCHHHHHH-HhccCCHHHHHHHHH-cCCCccccc
Confidence            5899999998864   479999999998       7789999999999999653 234578999999998 899999999


Q ss_pred             cCCChHHHH-HHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccC
Q 037168          176 DEGRNILHV-AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR  226 (466)
Q Consensus       176 ~~G~t~Lh~-A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~  226 (466)
                      ..|+||||. |+..++.+++++|+++|++    ++.+|..|.||||+|..++
T Consensus       156 ~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gad----i~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        156 FDNNNILYSYILFHSDKKIFDFLTSLGID----INETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CCCCcHHHHHHHhcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhhh
Confidence            999999996 5667899999999999998    9999999999999999754

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.96  E-value=6.1e-29  Score=257.71  Aligned_cols=206  Identities=18%  Similarity=0.171  Sum_probs=136.8

Q ss_pred             HHHHHHHhCCCccccccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCchhhh-hccCCCCChHHHHHHHc--CCcHH
Q 037168            8 KVIELCRKVPDHALYVFTIHDDTVLHMATYT---KKSDLVIKLLDELPDQSLDKM-TRQNKAGNTILHETATS--NHALP   81 (466)
Q Consensus         8 ~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~-~~~d~~G~TpLh~Aa~~--g~~~~   81 (466)
                      +++++|.+. +++++..|.+|.||||.|+..   |+.++++.|++     +|+++ +.+|..|+||||+|+..  ++. +
T Consensus        89 ~iv~~Ll~~-Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~-----~Gadin~~~d~~g~tpLh~a~~~~~~~~-~  161 (494)
T PHA02989         89 KIVKLLLKF-GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLS-----KGINVNDVKNSRGYNLLHMYLESFSVKK-D  161 (494)
T ss_pred             HHHHHHHHC-CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHH-----CCCCcccccCCCCCCHHHHHHHhccCCH-H
Confidence            344444443 355666666666666655543   45666666666     34445 45566666666665543  232 6


Q ss_pred             HHHHHHHhCCCcccC-cCCCCChHHHHHHHcC----CHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHH---hh
Q 037168           82 VADKVLRKAPGLLGM-RNNNGETALLRAARYG----KVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS---LH  153 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~-~d~~G~tpLh~Aa~~g----~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a---~~  153 (466)
                      +++.|+++ |++++. .|..|.||||+|++.+    +.+++++|++.       |++++.+|..|.||||.++..   ..
T Consensus       162 iv~~Ll~~-Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~-------Ga~vn~~~~~~~t~l~~~~~~~~~~~  233 (494)
T PHA02989        162 VIKILLSF-GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-------GVNIETNNNGSESVLESFLDNNKILS  233 (494)
T ss_pred             HHHHHHHc-CCCccccccccCCChHHHHHhcccccccHHHHHHHHhC-------CCCccccCCccccHHHHHHHhchhhc
Confidence            66666655 444554 4556666666665543    56666666665       455556666666666643211   11


Q ss_pred             cCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhc
Q 037168          154 FGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEK  233 (466)
Q Consensus       154 ~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~  233 (466)
                      .+..+++++|++  ++++|.+|..|+||||+|+..|+.+++++|+++|++    +|.+|..|+||||+|++.++.++++.
T Consensus       234 ~~~~~il~~l~~--~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gad----in~~d~~G~TpL~~A~~~~~~~iv~~  307 (494)
T PHA02989        234 KKEFKVLNFILK--YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDD----IYNVSKDGDTVLTYAIKHGNIDMLNR  307 (494)
T ss_pred             ccchHHHHHHHh--CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHHH
Confidence            234566665553  467888899999999999999999999999999999    99999999999999999999998866


Q ss_pred             c
Q 037168          234 M  234 (466)
Q Consensus       234 l  234 (466)
                      +
T Consensus       308 L  308 (494)
T PHA02989        308 I  308 (494)
T ss_pred             H
Confidence            5

>PHA02917 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.2e-28  Score=260.04  Aligned_cols=206  Identities=17%  Similarity=0.117  Sum_probs=171.4

Q ss_pred             hHHHHHHHHhCCCccccccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCc---
Q 037168            6 EQKVIELCRKVPDHALYVFTIHDDTVLHMATYT---KKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHA---   79 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~---   79 (466)
                      .++|.+++.++  .+.+..|.+|+||||+|+..   |+.++|+.||+     +|++++..|..|.||||+|+..|+.   
T Consensus        12 ~~~~~~l~~~~--~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~-----~ga~v~~~~~~g~TpL~~Aa~~g~~~v~   84 (661)
T PHA02917         12 LDELKQMLRDR--DPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLD-----SGTNPLHKNWRQLTPLEEYTNSRHVKVN   84 (661)
T ss_pred             HHHHHHHHhcc--CcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHH-----CCCCccccCCCCCCHHHHHHHcCChhHH
Confidence            36677777644  66788899999999998665   88999999999     5677889999999999999999984   


Q ss_pred             HHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHH
Q 037168           80 LPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEI  159 (466)
Q Consensus        80 ~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~  159 (466)
                      .++++.|++..+. .+..+  ..+++|+|+.+|+.+++++|+++       |++++.+|.+|+||||.+ .++..|+.|+
T Consensus        85 ~~~~~~Ll~~~~~-~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~-------Gadin~~d~~g~T~L~~~-~a~~~~~~ei  153 (661)
T PHA02917         85 KDIAMALLEATGY-SNIND--FNIFSYMKSKNVDVDLIKVLVEH-------GFDLSVKCENHRSVIENY-VMTDDPVPEI  153 (661)
T ss_pred             HHHHHHHHhccCC-CCCCC--cchHHHHHhhcCCHHHHHHHHHc-------CCCCCccCCCCccHHHHH-HHccCCCHHH
Confidence            2456778776443 34433  23778889999999999999998       789999999999999965 3456799999


Q ss_pred             HHHHHHHCCCccccccc---CC-----------ChHHHHHHH-----------cCChhHHHHHHhcCcccccccccccCC
Q 037168          160 VKDILSVYPQAVEHIDD---EG-----------RNILHVAIK-----------YRQLEIFERVVQMEIPLRRLVRKIDYN  214 (466)
Q Consensus       160 v~~Ll~~~~~~~~~~d~---~G-----------~t~Lh~A~~-----------~~~~~iv~~Ll~~g~~~~~~~~~~d~~  214 (466)
                      +++|++ .|++++.+|.   .|           .||||+|+.           +++.+++++|+++|++    +|.+|.+
T Consensus       154 vklLi~-~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad----vn~~d~~  228 (661)
T PHA02917        154 IDLFIE-NGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK----PSSIDKN  228 (661)
T ss_pred             HHHHHH-cCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC----cccCCCC
Confidence            999999 8999986654   34           599999986           4689999999999999    9999999


Q ss_pred             CCCchhhhhccCcc--hhhhcc
Q 037168          215 GNTIFHMAGIKRKD--YVAEKM  234 (466)
Q Consensus       215 G~TpLHlAa~~~~~--~~~~~l  234 (466)
                      |+||||+|++.++.  ++++.|
T Consensus       229 G~TpLh~A~~~g~~~~eivk~L  250 (661)
T PHA02917        229 YCTALQYYIKSSHIDIDIVKLL  250 (661)
T ss_pred             CCcHHHHHHHcCCCcHHHHHHH
Confidence            99999999999875  577655

>PHA02798 ankyrin-like protein; Provisional

Probab=99.96  E-value=5e-28  Score=250.55  Aligned_cols=207  Identities=16%  Similarity=0.151  Sum_probs=179.7

Q ss_pred             HHHHHHHHhCCCccccccCCCCCcHHHHHHHcC---CHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC---cH
Q 037168            7 QKVIELCRKVPDHALYVFTIHDDTVLHMATYTK---KSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH---AL   80 (466)
Q Consensus         7 ~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~---~~   80 (466)
                      .++.++|.+. +++++..|.+|+||||+|+..|   +.++++.|++     +|++++.+|..|.||||+|++.|+   . 
T Consensus        89 ~~iv~~Ll~~-GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~-----~Gadvn~~d~~g~tpL~~a~~~~~~~~~-  161 (489)
T PHA02798         89 LDIVKILIEN-GADINKKNSDGETPLYCLLSNGYINNLEILLFMIE-----NGADTTLLDKDGFTMLQVYLQSNHHIDI-  161 (489)
T ss_pred             HHHHHHHHHC-CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHH-----cCCCccccCCCCCcHHHHHHHcCCcchH-
Confidence            4566666665 5889999999999999999986   7899999999     567789999999999999999987   5 


Q ss_pred             HHHHHHHHhCCCcccCcC-CCCChHHHHHHHc----CCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHH----HHH
Q 037168           81 PVADKVLRKAPGLLGMRN-NNGETALLRAARY----GKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIA----ILS  151 (466)
Q Consensus        81 ~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa~~----g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A----~~a  151 (466)
                      ++++.|+++ |.+++.++ ..|.||||.++..    ++.+++++|+++       |++++..|..|+|+++..    ..+
T Consensus       162 ~vv~~Ll~~-gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~-------Ga~i~~~~~~~~~~~~~~l~~l~~~  233 (489)
T PHA02798        162 EIIKLLLEK-GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDN-------GFIINKENKSHKKKFMEYLNSLLYD  233 (489)
T ss_pred             HHHHHHHHh-CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHC-------CCCcccCCccccchHHHHHHHHHhh
Confidence            999999998 77888875 5799999998765    489999999998       678888888899987621    124


Q ss_pred             hhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168          152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA  231 (466)
Q Consensus       152 ~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~  231 (466)
                      ...++.++++.|+.  +.++|.+|..|+||||+|+.+|+.+++++|+++|++    +|.+|..|+||||+|++.++.+++
T Consensus       234 ~~~~~~~i~~~l~~--~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAd----in~~d~~G~TpL~~A~~~~~~~iv  307 (489)
T PHA02798        234 NKRFKKNILDFIFS--YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGD----INIITELGNTCLFTAFENESKFIF  307 (489)
T ss_pred             cccchHHHHHHHHh--cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCc----ccccCCCCCcHHHHHHHcCcHHHH
Confidence            45677888988775  489999999999999999999999999999999999    999999999999999999998888


Q ss_pred             hcc
Q 037168          232 EKM  234 (466)
Q Consensus       232 ~~l  234 (466)
                      +.+
T Consensus       308 ~~l  310 (489)
T PHA02798        308 NSI  310 (489)
T ss_pred             HHH
Confidence            666

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=3.8e-28  Score=222.53  Aligned_cols=181  Identities=14%  Similarity=0.166  Sum_probs=154.8

Q ss_pred             ccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcC--CHHHHHHHHhccCCCCCCCccccccc
Q 037168           61 RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYG--KVDIFNFLAGKISGYDHATRLPFLHR  138 (466)
Q Consensus        61 ~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~d  138 (466)
                      .....+.||||.|+..|+. ++++.|++.    ++.+|..|.||||+|+..+  +.+++++|++.       +++++.++
T Consensus        16 ~~~~~~~~pL~~A~~~~~~-~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~-------gadvn~~~   83 (209)
T PHA02859         16 YLFYRYCNPLFYYVEKDDI-EGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIEN-------GADVNFKT   83 (209)
T ss_pred             HHhhccCcHHHHHHHhCcH-HHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHC-------CCCCCccC
Confidence            3456789999999999997 999999875    5778999999999999864  89999999998       67888887


Q ss_pred             -CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHc--CChhHHHHHHhcCcccccccccccCCC
Q 037168          139 -NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKY--RQLEIFERVVQMEIPLRRLVRKIDYNG  215 (466)
Q Consensus       139 -~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~--~~~~iv~~Ll~~g~~~~~~~~~~d~~G  215 (466)
                       .+|.||||+|+.....++.++++.|++ +|++++.+|..|+||||.|+.+  ++.+++++|+++|++    ++.+|.+|
T Consensus        84 ~~~g~TpLh~a~~~~~~~~~eiv~~Ll~-~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gad----in~~d~~g  158 (209)
T PHA02859         84 RDNNLSALHHYLSFNKNVEPEILKILID-SGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVS----FLNKDFDN  158 (209)
T ss_pred             CCCCCCHHHHHHHhCccccHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC----cccccCCC
Confidence             489999996654444578999999998 8999999999999999999874  689999999999998    89999999


Q ss_pred             CCchhh-hhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHH
Q 037168          216 NTIFHM-AGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       216 ~TpLHl-Aa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~  277 (466)
                      +||||. |+..++.++++.|                   +..+.+++.+|..|+||++++..+
T Consensus       159 ~t~Lh~~a~~~~~~~iv~~L-------------------l~~Gadi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        159 NNILYSYILFHSDKKIFDFL-------------------TSLGIDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             CcHHHHHHHhcCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHhhh
Confidence            999996 4566777777665                   334566789999999999998754

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=4.9e-28  Score=230.49  Aligned_cols=178  Identities=20%  Similarity=0.218  Sum_probs=147.4

Q ss_pred             ccchHHHHHHHHhCCCcc--------ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHH
Q 037168            3 KQDEQKVIELCRKVPDHA--------LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETA   74 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~--------~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa   74 (466)
                      +|+.+-|..++++. ++.        .+-.+..|-+||-.|+..||.++|+.|++     +++++|.......|||-.||
T Consensus        52 nGH~~vVeyLle~~-~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~-----~ga~VN~tT~TNStPLraAC  125 (615)
T KOG0508|consen   52 NGHADVVEYLLEHC-RASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLR-----RGASVNDTTRTNSTPLRAAC  125 (615)
T ss_pred             cCcHHHHHHHHHHh-cCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHH-----hcCccccccccCCccHHHHH
Confidence            35555554444433 333        33346678899999999999999999999     55678888888889999999


Q ss_pred             HcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhc
Q 037168           75 TSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHF  154 (466)
Q Consensus        75 ~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~  154 (466)
                      .-|+. +++|+|+++ ++++++.|+.|.|+||+||.+||.+|+++|++.       |+++|.++..|+|+||   .++..
T Consensus       126 fDG~l-eivKyLvE~-gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~-------gADvn~ks~kGNTALH---~caEs  193 (615)
T KOG0508|consen  126 FDGHL-EIVKYLVEH-GADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ-------GADVNAKSYKGNTALH---DCAES  193 (615)
T ss_pred             hcchh-HHHHHHHHc-CCCCcccccCCCeeEEeeeccCchHHHHHHHHh-------CCCcchhcccCchHHH---hhhhc
Confidence            99997 999999977 788999999999999999999999999999998       7889999999999999   88889


Q ss_pred             CcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhc
Q 037168          155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM  200 (466)
Q Consensus       155 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~  200 (466)
                      |++|+++.|++ +++.++ +|..|.|||..|+..|+.++|++|++.
T Consensus       194 G~vdivq~Ll~-~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  194 GSVDIVQLLLK-HGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             ccHHHHHHHHh-CCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence            99999999998 776664 477799999999999999999998843

>PHA02917 ankyrin-like protein; Provisional

Probab=99.95  E-value=1.5e-26  Score=244.23  Aligned_cols=241  Identities=18%  Similarity=0.134  Sum_probs=172.1

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHH--HcCCHHHHHHHHHhCCCCchhhhhccCC---CC-----------C
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMAT--YTKKSDLVIKLLDELPDQSLDKMTRQNK---AG-----------N   67 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~d~---~G-----------~   67 (466)
                      |+.+.|.-++ +. +++++..|.+|.||||.|+  ..|+.+++++|++.     |++++.+|.   .|           .
T Consensus       114 ~~~e~vk~Ll-~~-Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~-----Ga~vn~~d~~~~~g~~~~~~~~~~~~  186 (661)
T PHA02917        114 VDVDLIKVLV-EH-GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN-----GCSVLYEDEDDEYGYAYDDYQPRNCG  186 (661)
T ss_pred             CCHHHHHHHH-Hc-CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc-----CCCccccccccccccccccccccccc
Confidence            4455554444 44 4889999999999999654  57899999999995     455554432   33           5


Q ss_pred             hHHHHHHH-----------cCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCH--HHHHHHHhccCCC------C
Q 037168           68 TILHETAT-----------SNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKV--DIFNFLAGKISGY------D  128 (466)
Q Consensus        68 TpLh~Aa~-----------~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~--~~v~~Ll~~~~~~------~  128 (466)
                      ||||+|+.           .++. +++++|+++ |++++.+|.+|.||||+|+..|+.  +++++|++.....      +
T Consensus       187 t~L~~a~~~~~~~~~~~~~~~~~-eiv~~Li~~-Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~d~~~~~~~~~  264 (661)
T PHA02917        187 TVLHLYIISHLYSESDTRAYVRP-EVVKCLINH-GIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGIDNTAYSYIDD  264 (661)
T ss_pred             cHHHHHHhhcccccccccccCcH-HHHHHHHHC-CCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCCcccccccccC
Confidence            99999986           3464 999999998 789999999999999999999985  7999998632100      0


Q ss_pred             C--------------------------------CCccc-------cc------------ccCCCCChhhHHHHHhhcCc-
Q 037168          129 H--------------------------------ATRLP-------FL------------HRNDKTNVLHIAILSLHFGC-  156 (466)
Q Consensus       129 ~--------------------------------~~~~~-------~~------------~d~~g~TpLh~A~~a~~~g~-  156 (466)
                      .                                .|++.       +.            .+..+.+++|++..++..|. 
T Consensus       265 ~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~  344 (661)
T PHA02917        265 LTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDI  344 (661)
T ss_pred             cccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCC
Confidence            0                                01000       00            01123334443333333333 


Q ss_pred             -HHHHHHHHH-----------------------------HCCCcccccccCCChHHHHHHHcC-----------------
Q 037168          157 -IEIVKDILS-----------------------------VYPQAVEHIDDEGRNILHVAIKYR-----------------  189 (466)
Q Consensus       157 -~~~v~~Ll~-----------------------------~~~~~~~~~d~~G~t~Lh~A~~~~-----------------  189 (466)
                       .++++.|++                             ..|++++..|.+|+||||.|++.+                 
T Consensus       345 ~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~  424 (661)
T PHA02917        345 DIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCD  424 (661)
T ss_pred             cHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccch
Confidence             335555555                             234444555667999999998543                 


Q ss_pred             ------ChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccc
Q 037168          190 ------QLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHR  263 (466)
Q Consensus       190 ------~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~  263 (466)
                            ..+++++|+++|++    +|.+|..|+||||+|+..++.++++.|                   +..+.+++.+
T Consensus       425 ~~~~~~~~~~v~~Ll~~GAd----IN~kd~~G~TpLh~Aa~~~~~~~v~~L-------------------l~~GAdin~~  481 (661)
T PHA02917        425 MSYACPILSTINICLPYLKD----INMIDKRGETLLHKAVRYNKQSLVSLL-------------------LESGSDVNIR  481 (661)
T ss_pred             hhhhhhhHHHHHHHHHCCCC----CCCCCCCCcCHHHHHHHcCCHHHHHHH-------------------HHCcCCCCCC
Confidence                  25678999999999    999999999999999998888887666                   4456678999


Q ss_pred             cCCCCChHHHHHH
Q 037168          264 NNMGFIPEELFAI  276 (466)
Q Consensus       264 n~~g~Tp~~l~~~  276 (466)
                      +..|.||++++..
T Consensus       482 d~~G~T~L~~A~~  494 (661)
T PHA02917        482 SNNGYTCIAIAIN  494 (661)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999999975

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=1.1e-26  Score=221.25  Aligned_cols=214  Identities=17%  Similarity=0.210  Sum_probs=180.6

Q ss_pred             cchHHHHHHHHhCCCcc---ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCC---c-hhhhhccCCCCChHHHHHHHc
Q 037168            4 QDEQKVIELCRKVPDHA---LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQ---S-LDKMTRQNKAGNTILHETATS   76 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~---~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~---~-~~~~~~~d~~G~TpLh~Aa~~   76 (466)
                      |+...+..++.+..+..   +--.+.+|.|||-+||++|+.++|++|+++....   . ....+-.+-+|-+||-.|+..
T Consensus        15 g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaA   94 (615)
T KOG0508|consen   15 GKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAA   94 (615)
T ss_pred             hhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhcc
Confidence            44445555554432111   1223567889999999999999999999964321   1 112233456789999999999


Q ss_pred             CCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCc
Q 037168           77 NHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGC  156 (466)
Q Consensus        77 g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~  156 (466)
                      ||. ++||.|+++ ++.+|.......|||--||.-|+.+++++|+++       ++++++.|..|.|.||   +|+.+|+
T Consensus        95 GHl-~vVk~L~~~-ga~VN~tT~TNStPLraACfDG~leivKyLvE~-------gad~~IanrhGhTcLm---Ia~ykGh  162 (615)
T KOG0508|consen   95 GHL-EVVKLLLRR-GASVNDTTRTNSTPLRAACFDGHLEIVKYLVEH-------GADPEIANRHGHTCLM---IACYKGH  162 (615)
T ss_pred             CcH-HHHHHHHHh-cCccccccccCCccHHHHHhcchhHHHHHHHHc-------CCCCcccccCCCeeEE---eeeccCc
Confidence            997 999999999 588999999999999999999999999999998       7899999999999999   8889999


Q ss_pred             HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccC
Q 037168          157 IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       157 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      ++++++|++ .++++|.++.+|+|+||.|++.|+.+++++|+++|+.     -.+|..|.|||-.|+..|..++++.|.
T Consensus       163 ~~I~qyLle-~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~-----i~~d~~GmtPL~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  163 VDIAQYLLE-QGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAK-----IDVDGHGMTPLLLAAVTGHTDIVERLL  235 (615)
T ss_pred             hHHHHHHHH-hCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCce-----eeecCCCCchHHHHhhhcchHHHHHHh
Confidence            999999999 8999999999999999999999999999999999975     346788999999999999999988775

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=1.3e-27  Score=255.28  Aligned_cols=232  Identities=22%  Similarity=0.168  Sum_probs=187.5

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN   98 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d   98 (466)
                      .+.+..+..|.||||.|+..++..+|+.+++     .+++.+..+..|.||+|+|+..|...+.+..+++. +.+++..-
T Consensus       398 a~~~~~gk~gvTplh~aa~~~~~~~v~l~l~-----~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~-g~~~n~~s  471 (1143)
T KOG4177|consen  398 ADPNSAGKNGVTPLHVAAHYGNPRVVKLLLK-----RGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQY-GADPNAVS  471 (1143)
T ss_pred             CCcccCCCCCcceeeehhhccCcceEEEEec-----cCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhc-CCCcchhc
Confidence            4466666666677777776666666666666     45667888999999999999998333666655555 78899999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCC--------------------------CCCCcccccccCCCCChhhHHHHHh
Q 037168           99 NNGETALLRAARYGKVDIFNFLAGKISGY--------------------------DHATRLPFLHRNDKTNVLHIAILSL  152 (466)
Q Consensus        99 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~--------------------------~~~~~~~~~~d~~g~TpLh~A~~a~  152 (466)
                      ..|.||||+|+..|+.++++.|++.....                          -..+...+.++.+|+||||   .|+
T Consensus       472 ~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh---~A~  548 (1143)
T KOG4177|consen  472 KQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLH---VAV  548 (1143)
T ss_pred             cccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHH---HHH
Confidence            99999999999999999999999876311                          1136788889999999999   888


Q ss_pred             hcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhh
Q 037168          153 HFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE  232 (466)
Q Consensus       153 ~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~  232 (466)
                      .+|++++|++||+ +|++++.+|+.|+||||.||..|+.+|+++|+++|++    +|..|.+|.||||+|++.|+.++++
T Consensus       549 ~~g~v~~VkfLLe-~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~----vna~d~~g~TpL~iA~~lg~~~~~k  623 (1143)
T KOG4177|consen  549 HYGNVDLVKFLLE-HGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS----VNAADLDGFTPLHIAVRLGYLSVVK  623 (1143)
T ss_pred             hcCCchHHHHhhh-CCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC----CCcccccCcchhHHHHHhcccchhh
Confidence            9999999999999 9999999999999999999999999999999999999    9999999999999999999998886


Q ss_pred             ccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          233 KMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       233 ~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      .+......              ....+....|..|.+|.++.++..
T Consensus       624 ~l~~~~~~--------------~~~~~~~~e~~~g~~p~~v~e~~~  655 (1143)
T KOG4177|consen  624 LLKVVTAT--------------PAATDPVKENRKGAVPEDVAEELD  655 (1143)
T ss_pred             HHHhccCc--------------cccccchhhhhcccChhhHHHHhh
Confidence            66211110              011124567888999999876643

>PHA02795 ankyrin-like protein; Provisional

Probab=99.94  E-value=4.1e-26  Score=225.04  Aligned_cols=204  Identities=13%  Similarity=0.108  Sum_probs=169.4

Q ss_pred             HHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh------ccCCCCChHHHHHHH--cCC
Q 037168            7 QKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT------RQNKAGNTILHETAT--SNH   78 (466)
Q Consensus         7 ~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~------~~d~~G~TpLh~Aa~--~g~   78 (466)
                      +-+-+++..+ +.+++..+.+|     +|+..+..|+++.|+.+     +++++      .++..++|+||+++.  .|+
T Consensus        62 ~~~~~~~~~~-~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~-----~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~  130 (437)
T PHA02795         62 DVLYDYFRIH-RDNIDQYIVDR-----LFAYITYKDIISALVSK-----NYMEDIFSIIIKNCNSVQDLLLYYLSNAYVE  130 (437)
T ss_pred             HHHHHHHHHc-Ccchhhhhhhh-----HHhhcchHHHHHHHHhc-----ccccchhhhhhhccccccHHHHHHHHhcCCC
Confidence            3345566665 45666666666     99999999999999994     45555      688889999999999  788


Q ss_pred             cHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHH
Q 037168           79 ALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIE  158 (466)
Q Consensus        79 ~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~  158 (466)
                      . +++++|+++ |++++..  ++.||||.|+..|+.+++++|++++...+. ..+....+..|.||+|   .++..++.|
T Consensus       131 ~-eiV~~LI~~-GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n-~~~~~l~~~~~~t~l~---~a~~~~~~e  202 (437)
T PHA02795        131 I-DIVDFMVDH-GAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDEN-DVKLDLYKIIQYTRGF---LVDEPTVLE  202 (437)
T ss_pred             H-HHHHHHHHC-CCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccc-cccchhhhhhccchhH---HHHhcCHHH
Confidence            6 999999988 8888874  458999999999999999999999642211 1112223345889999   778899999


Q ss_pred             HHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc--------chh
Q 037168          159 IVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK--------DYV  230 (466)
Q Consensus       159 ~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~--------~~~  230 (466)
                      +++.|++ +|+++|.+|..|+||||+|+.+|+.+++++|+++|++    +|.+|..|+||||+|+..|+        .++
T Consensus       203 Ive~LIs-~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAd----IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eI  277 (437)
T PHA02795        203 IYKLCIP-YIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGAN----VNAVMSNGYTCLDVAVDRGSVIARRETHLKI  277 (437)
T ss_pred             HHHHHHh-CcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCCcccccccHHHH
Confidence            9999998 8999999999999999999999999999999999999    99999999999999999884        366


Q ss_pred             hhcc
Q 037168          231 AEKM  234 (466)
Q Consensus       231 ~~~l  234 (466)
                      ++.|
T Consensus       278 velL  281 (437)
T PHA02795        278 LEIL  281 (437)
T ss_pred             HHHH
Confidence            6655

>PHA02792 ankyrin-like protein; Provisional

Probab=99.94  E-value=1.4e-25  Score=229.04  Aligned_cols=241  Identities=17%  Similarity=0.086  Sum_probs=192.9

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHH-cCCHHHHHHHHHhCCCCc--------------------------
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATY-TKKSDLVIKLLDELPDQS--------------------------   55 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~-~g~~~~v~~Ll~~~~~~~--------------------------   55 (466)
                      +|+.|-|..|+.+  +++++..+..|.||+|+|+. .|+.|++++|++.+++..                          
T Consensus        82 n~~lElvk~LI~~--GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~  159 (631)
T PHA02792         82 NIDIELLKLLISK--GLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDEL  159 (631)
T ss_pred             cccHHHHHHHHHc--CCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhc
Confidence            4666666666665  48899999999999999976 699999999999886511                          


Q ss_pred             -----hhhhhccCCCCChHHHHHHHcC-------CcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcC--CHHHHHHHH
Q 037168           56 -----LDKMTRQNKAGNTILHETATSN-------HALPVADKVLRKAPGLLGMRNNNGETALLRAARYG--KVDIFNFLA  121 (466)
Q Consensus        56 -----~~~~~~~d~~G~TpLh~Aa~~g-------~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g--~~~~v~~Ll  121 (466)
                           +-.++..|..|.||||+|+..+       +. ++++.|+++ ++.++..|..|.||||+|+.+.  +.|++++|+
T Consensus       160 ~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~-~v~k~Li~~-g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~  237 (631)
T PHA02792        160 DDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSL-DVINYLISH-EKEMRYYTYREHTTLYYYVDKCDIKREIFDALF  237 (631)
T ss_pred             cccccccccccCCCCCCchHHHHHhhCCcccccCCH-HHHHHHHhC-CCCcCccCCCCChHHHHHHHcccchHHHHHHHH
Confidence                 1135577888999999999988       64 999999998 7889999999999999999999  899999998


Q ss_pred             hccCC----------------------CC---------------------------------------------------
Q 037168          122 GKISG----------------------YD---------------------------------------------------  128 (466)
Q Consensus       122 ~~~~~----------------------~~---------------------------------------------------  128 (466)
                      +....                      .|                                                   
T Consensus       238 ~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~  317 (631)
T PHA02792        238 DSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYH  317 (631)
T ss_pred             hccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcC
Confidence            74320                      00                                                   


Q ss_pred             -----------CCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCC--ChHHHHHHHcCChh---
Q 037168          129 -----------HATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG--RNILHVAIKYRQLE---  192 (466)
Q Consensus       129 -----------~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G--~t~Lh~A~~~~~~~---  192 (466)
                                 ..|++.+  ...+..++|   .|+..|+.++++.|++ +|++++.+|.+|  .||||.|+.....+   
T Consensus       318 ~v~ieiIK~LId~Ga~~~--r~~~~n~~~---~Aa~~gn~eIVelLIs-~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~  391 (631)
T PHA02792        318 TVYINVIKCMIDEGATLY--RFKHINKYF---QKFDNRDPKVVEYILK-NGNVVVEDDDNIINIMPLFPTLSIHESDVLS  391 (631)
T ss_pred             CccHHHHHHHHHCCCccc--cCCcchHHH---HHHHcCCHHHHHHHHH-cCCchhhhcCCCCChhHHHHHHHhccHhHHH
Confidence                       0111111  112344556   6778899999999999 899999999875  69999988776654   


Q ss_pred             HHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHH
Q 037168          193 IFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEE  272 (466)
Q Consensus       193 iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~  272 (466)
                      ++++|+++|++    +|.+|..|+||||+|+..++.++++.|                   +..+.+++.+|..|+||++
T Consensus       392 IlklLIs~GAD----IN~kD~~G~TPLh~Aa~~~n~eivelL-------------------Ls~GADIN~kD~~G~TpL~  448 (631)
T PHA02792        392 ILKLCKPYIDD----INKIDKHGRSILYYCIESHSVSLVEWL-------------------IDNGADINITTKYGSTCIG  448 (631)
T ss_pred             HHHHHHhcCCc----cccccccCcchHHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHH
Confidence            67888999998    999999999999999999998888766                   3456678999999999999


Q ss_pred             HHHH
Q 037168          273 LFAI  276 (466)
Q Consensus       273 l~~~  276 (466)
                      ++..
T Consensus       449 ~A~~  452 (631)
T PHA02792        449 ICVI  452 (631)
T ss_pred             HHHH
Confidence            9865

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=6.2e-27  Score=250.09  Aligned_cols=220  Identities=23%  Similarity=0.221  Sum_probs=182.1

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN   98 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d   98 (466)
                      ......++.|.||+|.|++.|+.+.++.++.     .+++++.+++.|.||||.|+..++. ++++.+++. ++..+..+
T Consensus       365 ~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~-----~ga~~~~~gk~gvTplh~aa~~~~~-~~v~l~l~~-gA~~~~~~  437 (1143)
T KOG4177|consen  365 AQRRQAEEKGFTPLHLAVKSGRVSVVELLLE-----AGADPNSAGKNGVTPLHVAAHYGNP-RVVKLLLKR-GASPNAKA  437 (1143)
T ss_pred             cccCcccccCCcchhhhcccCchhHHHhhhh-----ccCCcccCCCCCcceeeehhhccCc-ceEEEEecc-CCChhhHh
Confidence            3344567778888888888888888888887     4555788888888888888888886 888888876 67788888


Q ss_pred             CCCChHHHHHHHcC-CHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH-----------
Q 037168           99 NNGETALLRAARYG-KVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV-----------  166 (466)
Q Consensus        99 ~~G~tpLh~Aa~~g-~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~-----------  166 (466)
                      ..|.||+|+|+..| ..++...+++.       +.+++..-..|.||||   .+++.|+.++++.+++.           
T Consensus       438 ~lG~T~lhvaa~~g~~~~~~~~l~~~-------g~~~n~~s~~G~T~Lh---laaq~Gh~~~~~llle~~~~~~~~~~~~  507 (1143)
T KOG4177|consen  438 KLGYTPLHVAAKKGRYLQIARLLLQY-------GADPNAVSKQGFTPLH---LAAQEGHTEVVQLLLEGGANDNLDAKKG  507 (1143)
T ss_pred             hcCCChhhhhhhcccHhhhhhhHhhc-------CCCcchhccccCcchh---hhhccCCchHHHHhhhcCCccCccchhc
Confidence            88999999999888 77777777777       5677777778888888   66677666666666551           


Q ss_pred             ---------------------CCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          167 ---------------------YPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       167 ---------------------~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                                           .+.+++.++..|.||||.|+.+|+.++|++|+++|++    ++.+|+.|+||||.|+..
T Consensus       508 l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd----v~ak~~~G~TPLH~Aa~~  583 (1143)
T KOG4177|consen  508 LTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD----VNAKDKLGYTPLHQAAQQ  583 (1143)
T ss_pred             cchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcc----ccccCCCCCChhhHHHHc
Confidence                                 4666788889999999999999999999999999999    999999999999999999


Q ss_pred             CcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          226 RKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       226 ~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      |+.+++++|                   ...+..+|..+.+|.||+.++....
T Consensus       584 G~~~i~~LL-------------------lk~GA~vna~d~~g~TpL~iA~~lg  617 (1143)
T KOG4177|consen  584 GHNDIAELL-------------------LKHGASVNAADLDGFTPLHIAVRLG  617 (1143)
T ss_pred             ChHHHHHHH-------------------HHcCCCCCcccccCcchhHHHHHhc
Confidence            999999777                   4567778999999999999997754

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.93  E-value=4.4e-24  Score=231.89  Aligned_cols=221  Identities=15%  Similarity=0.090  Sum_probs=166.9

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHH-HHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcC--C
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLH-MATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSN--H   78 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g--~   78 (466)
                      -+||.+.+.+++.+.++.+++..|..|+|||| .|+.+++.++++.|++.+     +    .+..|+||||.|+..+  .
T Consensus        26 ~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g-----~----~~~~G~T~Lh~A~~~~~~~   96 (743)
T TIGR00870        26 ERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLS-----C----RGAVGDTLLHAISLEYVDA   96 (743)
T ss_pred             HcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCC-----C----CCCcChHHHHHHHhccHHH
Confidence            36899999999988556788889999999999 888999999999999843     2    6788999999999732  2


Q ss_pred             cHHHHHHHHHhCCC-----ccc----CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCc-cc----c--cccCCCC
Q 037168           79 ALPVADKVLRKAPG-----LLG----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATR-LP----F--LHRNDKT  142 (466)
Q Consensus        79 ~~~~v~~Ll~~~~~-----~~~----~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~-~~----~--~~d~~g~  142 (466)
                      .+.+++.+....+.     ..+    ..+..|.||||+|+.+|+.+++++|++++.+.+.... +.    .  .....|+
T Consensus        97 v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~  176 (743)
T TIGR00870        97 VEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGE  176 (743)
T ss_pred             HHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccc
Confidence            22333433333221     111    2235799999999999999999999999553331100 00    0  0113699


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC---------ChhHHHHHHhcCcc---ccccccc
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR---------QLEIFERVVQMEIP---LRRLVRK  210 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~---------~~~iv~~Ll~~g~~---~~~~~~~  210 (466)
                      ||||   .|+..|+.++++.|++ .|++++.+|+.|+||||+|+..+         ...+.+++++.++.   ...+.+.
T Consensus       177 tpL~---~Aa~~~~~~iv~lLl~-~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i  252 (743)
T TIGR00870       177 SPLN---AAACLGSPSIVALLSE-DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI  252 (743)
T ss_pred             cHHH---HHHHhCCHHHHHHHhc-CCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence            9999   7778899999999998 89999999999999999999986         23455666665543   2223377


Q ss_pred             ccCCCCCchhhhhccCcchhhhccC
Q 037168          211 IDYNGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       211 ~d~~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      +|++|+||||+|+..|+.++++.+.
T Consensus       253 ~N~~g~TPL~~A~~~g~~~l~~lLL  277 (743)
T TIGR00870       253 LNHQGLTPLKLAAKEGRIVLFRLKL  277 (743)
T ss_pred             cCCCCCCchhhhhhcCCccHHHHHH
Confidence            8999999999999999999887663

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.93  E-value=3.6e-25  Score=241.93  Aligned_cols=179  Identities=18%  Similarity=0.189  Sum_probs=161.5

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCCh
Q 037168           24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGET  103 (466)
Q Consensus        24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~t  103 (466)
                      .+.++.++||.||..|+.++++.|++     .+.+++..|..|+||||+|+..|+. ++++.|+++ +++++.+|.+|+|
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~-----~G~d~n~~d~~G~TpLh~Aa~~g~~-~~v~~Ll~~-gadin~~d~~G~T  593 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLK-----AKLDPDIGDSKGRTPLHIAASKGYE-DCVLVLLKH-ACNVHIRDANGNT  593 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcChH-HHHHHHHhc-CCCCCCcCCCCCC
Confidence            34567899999999999999999999     5667889999999999999999996 999999997 7889999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHH
Q 037168          104 ALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILH  183 (466)
Q Consensus       104 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh  183 (466)
                      |||+|+..|+.+++++|++...       ..  .+..|.+|||   .|+..|+.++++.|++ +|+++|.+|.+|+||||
T Consensus       594 pL~~A~~~g~~~iv~~L~~~~~-------~~--~~~~~~~~L~---~Aa~~g~~~~v~~Ll~-~Gadin~~d~~G~TpLh  660 (823)
T PLN03192        594 ALWNAISAKHHKIFRILYHFAS-------IS--DPHAAGDLLC---TAAKRNDLTAMKELLK-QGLNVDSEDHQGATALQ  660 (823)
T ss_pred             HHHHHHHhCCHHHHHHHHhcCc-------cc--CcccCchHHH---HHHHhCCHHHHHHHHH-CCCCCCCCCCCCCCHHH
Confidence            9999999999999999997633       21  2346789999   7789999999999998 89999999999999999


Q ss_pred             HHHHcCChhHHHHHHhcCcccccccccccCCC-CCchhhhhccC
Q 037168          184 VAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG-NTIFHMAGIKR  226 (466)
Q Consensus       184 ~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G-~TpLHlAa~~~  226 (466)
                      +|+..|+.+++++|+++|++    ++.+|.+| .||++++....
T Consensus       661 ~A~~~g~~~iv~~Ll~~GAd----v~~~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        661 VAMAEDHVDMVRLLIMNGAD----VDKANTDDDFSPTELRELLQ  700 (823)
T ss_pred             HHHHCCcHHHHHHHHHcCCC----CCCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999    89999888 99999987543

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-25  Score=224.56  Aligned_cols=246  Identities=21%  Similarity=0.201  Sum_probs=208.5

Q ss_pred             ccchHHHHHHHHhCC-----------CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHH
Q 037168            3 KQDEQKVIELCRKVP-----------DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILH   71 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~-----------~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh   71 (466)
                      .||.+.+..+|....           ....+..|.+|.|.||.||.+|+.++++.|++     ..+.++..|..|.+|||
T Consensus        13 a~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle-----~ea~ldl~d~kg~~plh   87 (854)
T KOG0507|consen   13 AGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLD-----YEALLDLCDTKGILPLH   87 (854)
T ss_pred             cccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhc-----chhhhhhhhccCcceEE
Confidence            478888888887542           23367789999999999999999999999999     56678888999999999


Q ss_pred             HHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHH
Q 037168           72 ETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS  151 (466)
Q Consensus        72 ~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a  151 (466)
                      +|+..|+. ++++.++.. .+.+|..+..|.||||.|+.+||.+++.+|+++       ++++..+|+.+.|+|.   .|
T Consensus        88 laaw~g~~-e~vkmll~q-~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~-------~adp~i~nns~~t~ld---lA  155 (854)
T KOG0507|consen   88 LAAWNGNL-EIVKMLLLQ-TDILNAVNIENETPLHLAAQHGHLEVVFYLLKK-------NADPFIRNNSKETVLD---LA  155 (854)
T ss_pred             ehhhcCcc-hHHHHHHhc-ccCCCcccccCcCccchhhhhcchHHHHHHHhc-------CCCccccCcccccHHH---HH
Confidence            99999997 999999988 478999999999999999999999999999999       7789999999999999   88


Q ss_pred             hhcCcHHHHHHHHHHCCCc--------ccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhh
Q 037168          152 LHFGCIEIVKDILSVYPQA--------VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAG  223 (466)
Q Consensus       152 ~~~g~~~~v~~Ll~~~~~~--------~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa  223 (466)
                      ++.|..++++.|++. .-+        -..++-.+-+|||+|+++|+.++++.|++.|.+    +|...++| |+||-|+
T Consensus       156 ~qfgr~~Vvq~ll~~-~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~d----in~~t~~g-talheaa  229 (854)
T KOG0507|consen  156 SRFGRAEVVQMLLQK-KFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFD----INYTTEDG-TALHEAA  229 (854)
T ss_pred             HHhhhhHHHHHHhhh-ccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCC----cccccccc-hhhhhHh
Confidence            899999999999975 111        123456788999999999999999999999998    88887777 9999999


Q ss_pred             ccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhHHHHHhHHHHHH
Q 037168          224 IKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELRAQSKQWLI  290 (466)
Q Consensus       224 ~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~~~~~~~~~~~~  290 (466)
                      ..|..+++..+..                   -+.....+|.+|+|++|+..........+..-..+
T Consensus       230 lcgk~evvr~ll~-------------------~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~  277 (854)
T KOG0507|consen  230 LCGKAEVVRFLLE-------------------IGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVK  277 (854)
T ss_pred             hcCcchhhhHHHh-------------------hccccccccccchHHHHHHHhcchhhhhhhhhhhh
Confidence            9999999876632                   23345789999999999988766655544433333

>PF13962 PGG: Domain of unknown function

Probab=99.93  E-value=1.9e-25  Score=183.14  Aligned_cols=109  Identities=41%  Similarity=0.666  Sum_probs=96.5

Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHhhhcCCCCCCCC---CCcccccCCc-chhhHHHHHHHHHHHHHHHHHHHHhhccCc
Q 037168          286 KQWLIHTTEGCSVVAVLIATVAFAAAYTVPGGSNEN---TGYPILINHP-FFVAFTVSDVLSLTFSLAAVVTFLSMLTSP  361 (466)
Q Consensus       286 ~~~~~~~~~s~~vvA~LIaTvtFaa~ft~PGG~~~~---~G~~~~~~~~-~f~~F~~~n~~a~~~S~~~~~~~~~~~~~~  361 (466)
                      +||++++++++++||+|||||||+|+|||||||+|+   .|+|++.+++ .|++|+++|++||++|+++++++++.+   
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~---   77 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL---   77 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence            479999999999999999999999999999999764   6999999888 999999999999999999988777422   


Q ss_pred             ccccchhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037168          362 FRLEDFKHSLPNKMIMGFTFLFLSVCLMMVAFVATILLM  400 (466)
Q Consensus       362 ~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~af~~~~~~~  400 (466)
                         +++.+..++.+..+..++++++.+|++||++|+++|
T Consensus        78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v  113 (113)
T PF13962_consen   78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV  113 (113)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence               445556667788889999999999999999999864

>PHA02730 ankyrin-like protein; Provisional

Probab=99.92  E-value=1.6e-24  Score=223.55  Aligned_cols=218  Identities=13%  Similarity=0.127  Sum_probs=173.1

Q ss_pred             chHHHHHHHHhCCCccccccCCCCCcHHHH--HHHcCCHHHHHHHHH-----------hCCC----------------Cc
Q 037168            5 DEQKVIELCRKVPDHALYVFTIHDDTVLHM--ATYTKKSDLVIKLLD-----------ELPD----------------QS   55 (466)
Q Consensus         5 ~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~--A~~~g~~~~v~~Ll~-----------~~~~----------------~~   55 (466)
                      +..++.++|.++ +++++.+|.+|+||||+  |+..|+.|+|+.|++           ..+.                .+
T Consensus       213 n~~eiv~lLIs~-GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (672)
T PHA02730        213 LSKDVIKCLIDN-NVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPY  291 (672)
T ss_pred             cCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccC
Confidence            346777788887 58999999999999995  556678999999999           0000                01


Q ss_pred             hhhhhc--------------------cCCCCCh---------------------HHHHHHHcCC--cHHHHHHHHHhCCC
Q 037168           56 LDKMTR--------------------QNKAGNT---------------------ILHETATSNH--ALPVADKVLRKAPG   92 (466)
Q Consensus        56 ~~~~~~--------------------~d~~G~T---------------------pLh~Aa~~g~--~~~~v~~Ll~~~~~   92 (466)
                      +.++..                    .|..|.+                     .||.=...++  ..++++.|+++ |+
T Consensus       292 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~-GA  370 (672)
T PHA02730        292 NVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDN-GA  370 (672)
T ss_pred             CcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHC-CC
Confidence            233322                    5667755                     6777777663  24999999999 78


Q ss_pred             cccCcCCCCChHHHHHHHcCC----HHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcC---------cHHH
Q 037168           93 LLGMRNNNGETALLRAARYGK----VDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG---------CIEI  159 (466)
Q Consensus        93 ~~~~~d~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g---------~~~~  159 (466)
                      +++.. ..|.||||+|+..++    .+++++|++++.     ..+++.+|.+|.||||.++.+...+         ..++
T Consensus       371 dIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga-----~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~i  444 (672)
T PHA02730        371 TMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNG-----HMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDV  444 (672)
T ss_pred             CCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCC-----CccccccccCCCchHhHHHHHHhccccccccchhHHHH
Confidence            89985 799999999998875    899999999843     2367889999999999544343222         2367


Q ss_pred             HHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccC-CCCCchhhhhcc--CcchhhhccC
Q 037168          160 VKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDY-NGNTIFHMAGIK--RKDYVAEKME  235 (466)
Q Consensus       160 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLHlAa~~--~~~~~~~~l~  235 (466)
                      ++.|++ +++++|.+|..|+||||+|+..++.+++++|+++|++    +|.+|. .|+||||.|+..  ++.++++.|.
T Consensus       445 vk~LIs-~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAd----IN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LL  518 (672)
T PHA02730        445 FDILSK-YMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGAS----VNTTSRSIINTAIQKSSYRRENKTKLVDLLL  518 (672)
T ss_pred             HHHHHh-cccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCC----CCCCCCcCCcCHHHHHHHhhcCcHHHHHHHH
Confidence            999998 9999999999999999999999999999999999999    999997 599999999974  5677777663

>PHA02795 ankyrin-like protein; Provisional

Probab=99.92  E-value=9e-25  Score=215.59  Aligned_cols=180  Identities=12%  Similarity=0.016  Sum_probs=156.4

Q ss_pred             cchHHHHHHHHhCCCcccc------ccCCCCCcHHHHHHH--cCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHH
Q 037168            4 QDEQKVIELCRKVPDHALY------VFTIHDDTVLHMATY--TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETAT   75 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~------~~~~~g~T~Lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~   75 (466)
                      .+..++.++|.+. +++.+      ..+.+++|+||+|+.  .|+.++|++|++     +|++++..  ++.||||.|+.
T Consensus        87 ~~~k~~~~~l~s~-~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~-----~GADIn~~--~~~t~lh~A~~  158 (437)
T PHA02795         87 ITYKDIISALVSK-NYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVD-----HGAVIYKI--ECLNAYFRGIC  158 (437)
T ss_pred             cchHHHHHHHHhc-ccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHH-----CCCCCCCC--CCCCHHHHHHH
Confidence            4567788888887 46666      678889999999999  899999999999     56667663  55899999999


Q ss_pred             cCCcHHHHHHHHHhCCCcccCc-----CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHH
Q 037168           76 SNHALPVADKVLRKAPGLLGMR-----NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAIL  150 (466)
Q Consensus        76 ~g~~~~~v~~Ll~~~~~~~~~~-----d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~  150 (466)
                      .|+. +++++|++++..+.+..     +..|.||+|.|+..++.+++++|+++       |++++.+|.+|+||||   .
T Consensus       159 ~~~~-eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-------GADIN~kD~~G~TpLh---~  227 (437)
T PHA02795        159 KKES-SVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-------IEDINQLDAGGRTLLY---R  227 (437)
T ss_pred             cCcH-HHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC-------cCCcCcCCCCCCCHHH---H
Confidence            9996 99999999953333332     24588999999999999999999999       7789999999999999   7


Q ss_pred             HhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCC--------hhHHHHHHhcCcc
Q 037168          151 SLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ--------LEIFERVVQMEIP  203 (466)
Q Consensus       151 a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~--------~~iv~~Ll~~g~~  203 (466)
                      |+..|+.++++.|++ .|++++.+|..|+||||+|+.+|+        .+++++|+++|++
T Consensus       228 Aa~~g~~eiVelLL~-~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad  287 (437)
T PHA02795        228 AIYAGYIDLVSWLLE-NGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS  287 (437)
T ss_pred             HHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC
Confidence            778999999999998 899999999999999999999984        6999999999987

>PHA02730 ankyrin-like protein; Provisional

Probab=99.92  E-value=2.4e-24  Score=222.34  Aligned_cols=197  Identities=12%  Similarity=0.056  Sum_probs=160.6

Q ss_pred             ccc-ccCCCCCcHHHHHHHcC---CHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcC--CcHHHHHHHHHhC-CC
Q 037168           20 ALY-VFTIHDDTVLHMATYTK---KSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSN--HALPVADKVLRKA-PG   92 (466)
Q Consensus        20 ~~~-~~~~~g~T~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g--~~~~~v~~Ll~~~-~~   92 (466)
                      +++ ..|.+|+||||+|+..|   +.++|+.||+     +|++++.+|..|.||||+|+..+  +. ++++.|++.+ ++
T Consensus        32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs-----~GAdin~kD~~G~TPLh~Aa~~~~~~~-eIv~~Ll~~~~~~  105 (672)
T PHA02730         32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLS-----RGVERLCRNNEGLTPLGVYSKRKYVKS-QIVHLLISSYSNA  105 (672)
T ss_pred             chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHh-----CCCCCcccCCCCCChHHHHHHcCCCcH-HHHHHHHhcCCCC
Confidence            444 77899999999999997   5999999999     67789999999999999999977  54 9999999983 34


Q ss_pred             cccCcCCCCChHHHHHHH--cCCHHHHHHHHhccCCCCCCCcccccc----cC-CCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168           93 LLGMRNNNGETALLRAAR--YGKVDIFNFLAGKISGYDHATRLPFLH----RN-DKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus        93 ~~~~~d~~G~tpLh~Aa~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~----d~-~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      ..+..+..+.+|||.++.  +++.+++++|++.+      +.+++..    ++ .|.+|++   .+...++.|+|++|++
T Consensus       106 ~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~------~~~~~~~~~~~~~~~~~~~~y---l~~~~~~~eIvklLi~  176 (672)
T PHA02730        106 SNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDK------RIRPSKNTNYYIHCLGLVDIY---VTTPNPRPEVLLWLLK  176 (672)
T ss_pred             CcccccccCCchHHHHHHhcCCcHHHHHHHHHhc------CCChhhhhhhhccccchhhhh---HhcCCCchHHHHHHHH
Confidence            457788889999999988  89999999999632      2343333    22 7999999   8889999999999999


Q ss_pred             HCCCccc-------ccccCC-ChHHHHHHH------cCChhHHHHHHhcCcccccccccccCCCCCchhh--hhccCcch
Q 037168          166 VYPQAVE-------HIDDEG-RNILHVAIK------YRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHM--AGIKRKDY  229 (466)
Q Consensus       166 ~~~~~~~-------~~d~~G-~t~Lh~A~~------~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHl--Aa~~~~~~  229 (466)
                       .|++++       ..|..+ .|.||+++.      +++.|++++|+++|++    +|.+|.+|.||||+  |...++.+
T Consensus       177 -~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~Gad----IN~kd~~G~TpLh~~~~~~~~~~e  251 (672)
T PHA02730        177 -SECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVS----IHGRDEGGSLPIQYYWSCSTIDIE  251 (672)
T ss_pred             -cCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCcccHH
Confidence             788874       234444 466775544      4679999999999999    99999999999995  55566788


Q ss_pred             hhhccCC
Q 037168          230 VAEKMEG  236 (466)
Q Consensus       230 ~~~~l~~  236 (466)
                      +++.|..
T Consensus       252 iv~~Li~  258 (672)
T PHA02730        252 IVKLLIK  258 (672)
T ss_pred             HHHHHHh
Confidence            8887754

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.91  E-value=6e-24  Score=232.31  Aligned_cols=178  Identities=16%  Similarity=0.181  Sum_probs=158.0

Q ss_pred             cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC
Q 037168           62 QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK  141 (466)
Q Consensus        62 ~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g  141 (466)
                      .+..+.++||.||..|+. ++++.|++. +.++|..|.+|+||||+|+..|+.+++++|+++       +++++.+|.+|
T Consensus       521 ~~~~~~~~L~~Aa~~g~~-~~l~~Ll~~-G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-------gadin~~d~~G  591 (823)
T PLN03192        521 DDPNMASNLLTVASTGNA-ALLEELLKA-KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKH-------ACNVHIRDANG  591 (823)
T ss_pred             CCccchhHHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhc-------CCCCCCcCCCC
Confidence            455678999999999996 999999987 788999999999999999999999999999998       67889999999


Q ss_pred             CChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhh
Q 037168          142 TNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHM  221 (466)
Q Consensus       142 ~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHl  221 (466)
                      +||||   .|+..|+.++++.|++ .+...+  +..|.++||.|+.+|+.++++.|+++|++    +|.+|.+|+||||+
T Consensus       592 ~TpL~---~A~~~g~~~iv~~L~~-~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad----in~~d~~G~TpLh~  661 (823)
T PLN03192        592 NTALW---NAISAKHHKIFRILYH-FASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLN----VDSEDHQGATALQV  661 (823)
T ss_pred             CCHHH---HHHHhCCHHHHHHHHh-cCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCC----CCCCCCCCCCHHHH
Confidence            99999   7778999999999997 554433  45688999999999999999999999998    99999999999999


Q ss_pred             hhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCC-CChHHHHHHH
Q 037168          222 AGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMG-FIPEELFAIA  277 (466)
Q Consensus       222 Aa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g-~Tp~~l~~~~  277 (466)
                      |+..|+.++++.|                   +..+.+++..|.+| .||.+++...
T Consensus       662 A~~~g~~~iv~~L-------------------l~~GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        662 AMAEDHVDMVRLL-------------------IMNGADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             HHHCCcHHHHHHH-------------------HHcCCCCCCCCCCCCCCHHHHHHHH
Confidence            9999999998777                   34456678888888 9999887654

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.91  E-value=6.7e-25  Score=189.98  Aligned_cols=201  Identities=18%  Similarity=0.143  Sum_probs=173.6

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHH
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA   83 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v   83 (466)
                      |+.+-.+....-.+++ ....+.+|+.++|.|+-.|+.+.+..+|.     ++...|..+-.+.+|+.+++...+. +.+
T Consensus        73 ~nsd~~v~s~~~~~~~-~~~t~p~g~~~~~v~ap~~s~~k~sttlt-----N~~rgnevs~~p~s~~slsVhql~L-~~~  145 (296)
T KOG0502|consen   73 GNSDVAVQSAQLDPDA-IDETDPEGWSALLVAAPCGSVDKVSTTLT-----NGARGNEVSLMPWSPLSLSVHQLHL-DVV  145 (296)
T ss_pred             CCcHHHHHhhccCCCC-CCCCCchhhhhhhhcCCCCCcceeeeeec-----ccccCCccccccCChhhHHHHHHHH-HHH
Confidence            3344444444444444 34456779999999999999999999998     5556678888999999999988776 665


Q ss_pred             HHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHH
Q 037168           84 DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDI  163 (466)
Q Consensus        84 ~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~L  163 (466)
                      ..+.+   ..+|..|+.|.|||.||+.+|+.++|++|++.       |++++...+...|+|.   .|++.|..++|+.|
T Consensus       146 ~~~~~---n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~-------GAdp~~lgk~resALs---LAt~ggytdiV~lL  212 (296)
T KOG0502|consen  146 DLLVN---NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNS-------GADPDALGKYRESALS---LATRGGYTDIVELL  212 (296)
T ss_pred             HHHhh---ccccCccccCchHhHHHHhcCchHHHHHHHHc-------CCChhhhhhhhhhhHh---HHhcCChHHHHHHH
Confidence            44443   35999999999999999999999999999998       7788888899999999   88899999999999


Q ss_pred             HHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcch
Q 037168          164 LSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDY  229 (466)
Q Consensus       164 l~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~  229 (466)
                      |. ++.++|..|-+|-|||-+|++.++.++++.|++.|++    ++..|..|++++.+|+..|+..
T Consensus       213 L~-r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd----~t~e~dsGy~~mdlAValGyr~  273 (296)
T KOG0502|consen  213 LT-REVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGAD----VTQEDDSGYWIMDLAVALGYRI  273 (296)
T ss_pred             Hh-cCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCC----cccccccCCcHHHHHHHhhhHH
Confidence            99 8899999999999999999999999999999999999    9999999999999999998763

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.91  E-value=3.5e-24  Score=232.75  Aligned_cols=231  Identities=17%  Similarity=0.118  Sum_probs=162.4

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHH-HHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILH-ETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh-~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      ..++..++.||+.|+.+.++.+++..+   +.++|..|..|+|||| .|+..++ .++++.|++. +.    .+..|.||
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~---~~~in~~d~~G~t~Lh~~A~~~~~-~eiv~lLl~~-g~----~~~~G~T~   85 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPK---KLNINCPDRLGRSALFVAAIENEN-LELTELLLNL-SC----RGAVGDTL   85 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhcccc---ccCCCCcCccchhHHHHHHHhcCh-HHHHHHHHhC-CC----CCCcChHH
Confidence            356899999999999999999998532   5678899999999999 6666666 5999988887 33    78899999


Q ss_pred             HHHHHHcCCHHHHHHH----HhccCCCCC---CCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc--
Q 037168          105 LLRAARYGKVDIFNFL----AGKISGYDH---ATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID--  175 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~L----l~~~~~~~~---~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d--  175 (466)
                      ||.|+.. +.+.++.+    .+..+..+.   ........+..|.||||   .|+..|+.++++.|++ +|++++.++  
T Consensus        86 Lh~A~~~-~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLh---lAa~~~~~eiVklLL~-~GAdv~~~~~~  160 (743)
T TIGR00870        86 LHAISLE-YVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALH---LAAHRQNYEIVKLLLE-RGASVPARACG  160 (743)
T ss_pred             HHHHHhc-cHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHH---HHHHhCCHHHHHHHHh-CCCCCCcCcCC
Confidence            9999873 33333333    333211000   00011122357999999   7789999999999999 788888653  


Q ss_pred             ------------cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhh
Q 037168          176 ------------DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQD  243 (466)
Q Consensus       176 ------------~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~  243 (466)
                                  ..|+||||.|+..|+.+++++|+++|+|    +|.+|..|+||||+|+..+..... .. ....++.+
T Consensus       161 ~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad----in~~d~~g~T~Lh~A~~~~~~~~~-~~-~l~~~~~~  234 (743)
T TIGR00870       161 DFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD----ILTADSLGNTLLHLLVMENEFKAE-YE-ELSCQMYN  234 (743)
T ss_pred             chhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc----hhhHhhhhhHHHHHHHhhhhhhHH-HH-HHHHHHHH
Confidence                        3699999999999999999999999998    999999999999999987622110 00 00000000


Q ss_pred             HhhHHhhhhh-cCcccccccccCCCCChHHHHHHHh
Q 037168          244 ELLWYERVKS-VTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       244 ~~~~~~~v~~-~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      -+  .+.... ..+....+.+|++|.||++++.+..
T Consensus       235 ~l--~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g  268 (743)
T TIGR00870       235 FA--LSLLDKLRDSKELEVILNHQGLTPLKLAAKEG  268 (743)
T ss_pred             HH--HHHHhccCChHhhhhhcCCCCCCchhhhhhcC
Confidence            00  000011 1111223678999999999987643

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.89  E-value=3.6e-23  Score=201.33  Aligned_cols=208  Identities=21%  Similarity=0.218  Sum_probs=165.9

Q ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHH
Q 037168           31 VLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAAR  110 (466)
Q Consensus        31 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~  110 (466)
                      .+.-|+..|+.+-|+.|+..     ++..+..|.+|.|+||-+|.-.+. +||++|++. ++++|.+|.+|+||||.|+.
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~-----ga~~~~~n~DglTalhq~~id~~~-e~v~~l~e~-ga~Vn~~d~e~wtPlhaaas  115 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNR-----GASPNLCNVDGLTALHQACIDDNL-EMVKFLVEN-GANVNAQDNEGWTPLHAAAS  115 (527)
T ss_pred             HHHhccccccHHHHHHHhcc-----CCCccccCCccchhHHHHHhcccH-HHHHHHHHh-cCCccccccccCCcchhhcc
Confidence            46668889999999999994     456688999999999999998885 999999998 78899999999999999999


Q ss_pred             cCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHH-------H---HhhcC-------------cHHHHHHHHHHC
Q 037168          111 YGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAI-------L---SLHFG-------------CIEIVKDILSVY  167 (466)
Q Consensus       111 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~-------~---a~~~g-------------~~~~v~~Ll~~~  167 (466)
                      .|+..++++|++.       +++....+.+|..|+..+.       .   ....|             ..+-+...+. .
T Consensus       116 cg~~~i~~~li~~-------gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~-~  187 (527)
T KOG0505|consen  116 CGYLNIVEYLIQH-------GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN-A  187 (527)
T ss_pred             cccHHHHHHHHHh-------hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh-c
Confidence            9999999999998       4455555556666655321       0   00111             1111223344 6


Q ss_pred             CCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhH
Q 037168          168 PQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLW  247 (466)
Q Consensus       168 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~  247 (466)
                      |...+..+..|.|.||+|+.+|..++.++|++.|.+    ++.+|.+|+||||.|+.-+..+.+++|             
T Consensus       188 G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~----~~~~D~dgWtPlHAAA~Wg~~~~~elL-------------  250 (527)
T KOG0505|consen  188 GAELDARHARGATALHVAAANGYTEVAALLLQAGYS----VNIKDYDGWTPLHAAAHWGQEDACELL-------------  250 (527)
T ss_pred             cccccccccccchHHHHHHhhhHHHHHHHHHHhccC----cccccccCCCcccHHHHhhhHhHHHHH-------------
Confidence            777788888899999999999999999999999988    999999999999999999888887655             


Q ss_pred             HhhhhhcCcccccccccCCCCChHHHHHH
Q 037168          248 YERVKSVTMPHFLNHRNNMGFIPEELFAI  276 (466)
Q Consensus       248 ~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~  276 (466)
                            +..+.+.+.++..|+||+|++.+
T Consensus       251 ------~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  251 ------VEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             ------HHhhcccchhhhcCCCCccchhh
Confidence                  34555678899999999999876

>PHA02792 ankyrin-like protein; Provisional

Probab=99.89  E-value=2e-22  Score=206.04  Aligned_cols=182  Identities=14%  Similarity=0.124  Sum_probs=149.3

Q ss_pred             cccCCCCCcHHHHHHHcC-------CHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcC--CcHHHHHHHH-----
Q 037168           22 YVFTIHDDTVLHMATYTK-------KSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSN--HALPVADKVL-----   87 (466)
Q Consensus        22 ~~~~~~g~T~Lh~A~~~g-------~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g--~~~~~v~~Ll-----   87 (466)
                      +..|..|.||||+|+..+       +.|+++.|++     +|++++..|..|.||||+|+.+.  +. ++++.|+     
T Consensus       169 ~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~-----~g~~~~~~d~~g~t~l~~~~~~~~i~~-ei~~~L~~~~~~  242 (631)
T PHA02792        169 DYDDRMGKTVLYYYIITRSQDGYATSLDVINYLIS-----HEKEMRYYTYREHTTLYYYVDKCDIKR-EIFDALFDSNYS  242 (631)
T ss_pred             ccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHh-----CCCCcCccCCCCChHHHHHHHcccchH-HHHHHHHhcccc
Confidence            356777999999999999       8999999999     66778889999999999999977  32 4444333     


Q ss_pred             --------------------------------------------------------------------------------
Q 037168           88 --------------------------------------------------------------------------------   87 (466)
Q Consensus        88 --------------------------------------------------------------------------------   87 (466)
                                                                                                      
T Consensus       243 ~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ie  322 (631)
T PHA02792        243 GNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYIN  322 (631)
T ss_pred             ccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHH
Confidence                                                                                            


Q ss_pred             ------HhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC--CChhhHHHHHhhcCcHHH
Q 037168           88 ------RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK--TNVLHIAILSLHFGCIEI  159 (466)
Q Consensus        88 ------~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g--~TpLh~A~~a~~~g~~~~  159 (466)
                            ++ |+...  ...+..++|.|+..|+.+++++|+++       |++++.+|.+|  .||||+|......+..++
T Consensus       323 iIK~LId~-Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~-------GADIN~kD~~g~~~TpLh~A~~n~~~~v~~I  392 (631)
T PHA02792        323 VIKCMIDE-GATLY--RFKHINKYFQKFDNRDPKVVEYILKN-------GNVVVEDDDNIINIMPLFPTLSIHESDVLSI  392 (631)
T ss_pred             HHHHHHHC-CCccc--cCCcchHHHHHHHcCCHHHHHHHHHc-------CCchhhhcCCCCChhHHHHHHHhccHhHHHH
Confidence                  33 22221  12356678999999999999999998       77888888775  699996544333334567


Q ss_pred             HHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          160 VKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       160 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      ++.+++ +++++|.+|..|+||||+|+..++.+++++|+++|++    +|.+|..|+||||+|+.
T Consensus       393 lklLIs-~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GAD----IN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        393 LKLCKP-YIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGAD----INITTKYGSTCIGICVI  452 (631)
T ss_pred             HHHHHh-cCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHH
Confidence            888888 8999999999999999999999999999999999998    99999999999999975

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.89  E-value=3.4e-23  Score=191.85  Aligned_cols=178  Identities=19%  Similarity=0.187  Sum_probs=151.1

Q ss_pred             CHHHHHHHHHhCCC----CchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHc----
Q 037168           40 KSDLVIKLLDELPD----QSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARY----  111 (466)
Q Consensus        40 ~~~~v~~Ll~~~~~----~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~----  111 (466)
                      +.+.|+..|.....    .-.-.+|..|.+|+|+||||+.++|+ ++|+.||+.+-++++.+|+.|+||+++|+..    
T Consensus       238 ~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF-~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~  316 (452)
T KOG0514|consen  238 DPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANF-DVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQ  316 (452)
T ss_pred             CHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccch-HHHHHHhccCcccccccccccccHHHHHHHHhhcc
Confidence            56777666553211    11345788999999999999999998 9999999999999999999999999998864    


Q ss_pred             -CCHHHHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC
Q 037168          112 -GKVDIFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR  189 (466)
Q Consensus       112 -g~~~~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~  189 (466)
                       .+.++|..|.+.        .++|.+-+ .|+|+|+   +|...|++++++.||. |++++|.+|.+|.|+|++|+++|
T Consensus       317 ~~d~~vV~~LF~m--------gnVNaKAsQ~gQTALM---LAVSHGr~d~vk~LLa-cgAdVNiQDdDGSTALMCA~EHG  384 (452)
T KOG0514|consen  317 PADRTVVERLFKM--------GDVNAKASQHGQTALM---LAVSHGRVDMVKALLA-CGADVNIQDDDGSTALMCAAEHG  384 (452)
T ss_pred             hhhHHHHHHHHhc--------cCcchhhhhhcchhhh---hhhhcCcHHHHHHHHH-ccCCCccccCCccHHHhhhhhhC
Confidence             468889999887        35666654 6999999   7779999999999998 99999999999999999999999


Q ss_pred             ChhHHHHHHhcC-cccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          190 QLEIFERVVQME-IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       190 ~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |.||+++|+... .|    +...|.+|-|+|.+|-..|+.++.-+|
T Consensus       385 hkEivklLLA~p~cd----~sLtD~DgSTAl~IAleagh~eIa~ml  426 (452)
T KOG0514|consen  385 HKEIVKLLLAVPSCD----ISLTDVDGSTALSIALEAGHREIAVML  426 (452)
T ss_pred             hHHHHHHHhccCccc----ceeecCCCchhhhhHHhcCchHHHHHH
Confidence            999999999653 34    788999999999999999999886333

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.88  E-value=6.4e-23  Score=190.07  Aligned_cols=179  Identities=23%  Similarity=0.284  Sum_probs=154.5

Q ss_pred             chHHHHHHHHhCC-------CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcC
Q 037168            5 DEQKVIELCRKVP-------DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSN   77 (466)
Q Consensus         5 ~~~~v~~ll~~~~-------~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g   77 (466)
                      +.+.|.+++..+.       +..+|.-|.+|+|+||||+.++|.++|+.||+.    ..++++.+|+.|+||.++|+...
T Consensus       238 ~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDS----gvC~VD~qNrAGYtpiMLaALA~  313 (452)
T KOG0514|consen  238 DPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDS----GVCDVDQQNRAGYTPVMLAALAK  313 (452)
T ss_pred             CHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhcc----CcccccccccccccHHHHHHHHh
Confidence            3455656555542       123677899999999999999999999999996    45789999999999999998743


Q ss_pred             -----CcHHHHHHHHHhCCCcccCc-CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHH
Q 037168           78 -----HALPVADKVLRKAPGLLGMR-NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS  151 (466)
Q Consensus        78 -----~~~~~v~~Ll~~~~~~~~~~-d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a  151 (466)
                           + .++|..|.+- | ++|.+ ...|+|+|++|+.+|+.++|+.|+..       ++++|.+|.+|.|+|+   .|
T Consensus       314 lk~~~d-~~vV~~LF~m-g-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLac-------gAdVNiQDdDGSTALM---CA  380 (452)
T KOG0514|consen  314 LKQPAD-RTVVERLFKM-G-DVNAKASQHGQTALMLAVSHGRVDMVKALLAC-------GADVNIQDDDGSTALM---CA  380 (452)
T ss_pred             hcchhh-HHHHHHHHhc-c-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHc-------cCCCccccCCccHHHh---hh
Confidence                 3 3788888887 3 36655 46899999999999999999999999       7899999999999999   66


Q ss_pred             hhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhc
Q 037168          152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM  200 (466)
Q Consensus       152 ~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~  200 (466)
                      +..||+|+++.||....+++...|.+|.|+|.+|-..||.||.-+|..+
T Consensus       381 ~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  381 AEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             hhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            7899999999999988889999999999999999999999999998865

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.88  E-value=6.8e-22  Score=174.46  Aligned_cols=147  Identities=12%  Similarity=0.080  Sum_probs=120.4

Q ss_pred             chhhhhccCCCCChHHHHHHHcCCcH---HHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHH---HHHHHhccCCCC
Q 037168           55 SLDKMTRQNKAGNTILHETATSNHAL---PVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDI---FNFLAGKISGYD  128 (466)
Q Consensus        55 ~~~~~~~~d~~G~TpLh~Aa~~g~~~---~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~---v~~Ll~~~~~~~  128 (466)
                      ++.+++..+.++.++||.||+.|+..   ++++.|.+. +..++.+|..|+||||+|+..|+.+.   +++|++.     
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~-g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-----   82 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGD-GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-----   82 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhc-chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-----
Confidence            56778888888889999999988863   333444444 66788889999999999999887654   7888887     


Q ss_pred             CCCccccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccc
Q 037168          129 HATRLPFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRL  207 (466)
Q Consensus       129 ~~~~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~  207 (466)
                        +++++.+| ..|+||||   .|+..|+.+++++|++..+.+++.+|..|+||||+|+..++.+++++|+++|++    
T Consensus        83 --Gadin~~d~~~g~TpLh---~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~----  153 (166)
T PHA02743         83 --GADINARELGTGNTLLH---IAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAV----  153 (166)
T ss_pred             --CCCCCCCCCCCCCcHHH---HHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----
Confidence              66778887 47999999   666889999999998657889999999999999999999999999999999988    


Q ss_pred             cccccCCCC
Q 037168          208 VRKIDYNGN  216 (466)
Q Consensus       208 ~~~~d~~G~  216 (466)
                      ++.+|..|.
T Consensus       154 ~~~~~~~~~  162 (166)
T PHA02743        154 CDDPLSIGL  162 (166)
T ss_pred             CCCcccCCc
Confidence            777777664

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.87  E-value=5.5e-22  Score=171.98  Aligned_cols=177  Identities=20%  Similarity=0.158  Sum_probs=162.2

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN   98 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d   98 (466)
                      ...+..+-.+++|+.+++...+.+.+..+.+       ..+|..|+.|.|||.+|+..|+. ++|++|++. |++++...
T Consensus       120 ~rgnevs~~p~s~~slsVhql~L~~~~~~~~-------n~VN~~De~GfTpLiWAaa~G~i-~vV~fLL~~-GAdp~~lg  190 (296)
T KOG0502|consen  120 ARGNEVSLMPWSPLSLSVHQLHLDVVDLLVN-------NKVNACDEFGFTPLIWAAAKGHI-PVVQFLLNS-GADPDALG  190 (296)
T ss_pred             ccCCccccccCChhhHHHHHHHHHHHHHHhh-------ccccCccccCchHhHHHHhcCch-HHHHHHHHc-CCChhhhh
Confidence            3356667789999999999999998888887       36889999999999999999997 999999998 88899999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCC
Q 037168           99 NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG  178 (466)
Q Consensus        99 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G  178 (466)
                      +...|+|.+|++.|..++|++|+++       +.++|..|-+|-|||-   +|++.|++++++.|++ .|++++..|..|
T Consensus       191 k~resALsLAt~ggytdiV~lLL~r-------~vdVNvyDwNGgTpLl---yAvrgnhvkcve~Ll~-sGAd~t~e~dsG  259 (296)
T KOG0502|consen  191 KYRESALSLATRGGYTDIVELLLTR-------EVDVNVYDWNGGTPLL---YAVRGNHVKCVESLLN-SGADVTQEDDSG  259 (296)
T ss_pred             hhhhhhHhHHhcCChHHHHHHHHhc-------CCCcceeccCCCceee---eeecCChHHHHHHHHh-cCCCcccccccC
Confidence            9999999999999999999999999       6789999999999999   7779999999999998 899999999999


Q ss_pred             ChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchh
Q 037168          179 RNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFH  220 (466)
Q Consensus       179 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLH  220 (466)
                      ++++..|+..|+. +|+.++++-+.    .+.+|+.-.||+|
T Consensus       260 y~~mdlAValGyr-~Vqqvie~h~l----kl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  260 YWIMDLAVALGYR-IVQQVIEKHAL----KLCQDSEKRTPLH  296 (296)
T ss_pred             CcHHHHHHHhhhH-HHHHHHHHHHH----HHhhcccCCCCCC
Confidence            9999999999988 88888887666    7889999999997

>PHA02741 hypothetical protein; Provisional

Probab=99.86  E-value=2.2e-21  Score=171.93  Aligned_cols=132  Identities=13%  Similarity=0.178  Sum_probs=103.1

Q ss_pred             hccCCCCChHHHHHHHcCCcHHHHHHHHHh-----CCCcccCcCCCCChHHHHHHHcCC----HHHHHHHHhccCCCCCC
Q 037168           60 TRQNKAGNTILHETATSNHALPVADKVLRK-----APGLLGMRNNNGETALLRAARYGK----VDIFNFLAGKISGYDHA  130 (466)
Q Consensus        60 ~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~-----~~~~~~~~d~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~  130 (466)
                      +.+|..|.||||+|++.|+. ++++.|+..     .+.+++.+|..|+||||+|+..|+    .+++++|++.       
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~-~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-------   86 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCF-DIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-------   86 (169)
T ss_pred             hccccCCCCHHHHHHHcCCH-HHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-------
Confidence            34677888888888888886 888877542     246678888888888888888887    4777888877       


Q ss_pred             CcccccccC-CCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCc
Q 037168          131 TRLPFLHRN-DKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEI  202 (466)
Q Consensus       131 ~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~  202 (466)
                      +.+++.+|. +|+||||   .|+..++.++++.|++..+.+++.+|..|+||||+|+..++.+++++|++.++
T Consensus        87 gadin~~~~~~g~TpLh---~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         87 GADINAQEMLEGDTALH---LAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCCCCCCCcCCCCCHHH---HHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            567777774 7888888   66678888888888874577888888888888888888888888888887654

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.85  E-value=1.6e-21  Score=189.88  Aligned_cols=206  Identities=18%  Similarity=0.173  Sum_probs=174.4

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      ..||.+++..+|..+  ...+..+.+|.|+||-+|...+.++|++|++     .++++|..|..|+||||.|+..|+. .
T Consensus        49 ~~~d~~ev~~ll~~g--a~~~~~n~DglTalhq~~id~~~e~v~~l~e-----~ga~Vn~~d~e~wtPlhaaascg~~-~  120 (527)
T KOG0505|consen   49 SRGDLEEVRKLLNRG--ASPNLCNVDGLTALHQACIDDNLEMVKFLVE-----NGANVNAQDNEGWTPLHAAASCGYL-N  120 (527)
T ss_pred             ccccHHHHHHHhccC--CCccccCCccchhHHHHHhcccHHHHHHHHH-----hcCCccccccccCCcchhhcccccH-H
Confidence            468999999999987  5568899999999999999999999999999     6788999999999999999999997 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccC-------CC------------CCCCcccccccCCCC
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-------GY------------DHATRLPFLHRNDKT  142 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~-------~~------------~~~~~~~~~~d~~g~  142 (466)
                      ++++|+.. ++++...|.+|..|+.++..--..++...-.....       ..            -..|...+..+..|.
T Consensus       121 i~~~li~~-gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~  199 (527)
T KOG0505|consen  121 IVEYLIQH-GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGA  199 (527)
T ss_pred             HHHHHHHh-hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccc
Confidence            99999998 77788888888888876654333222221111100       00            012566677777799


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA  222 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA  222 (466)
                      |.||   .|+..|..++.+.|++ .+.+++.+|.+|+||||.|+..|+.++.++|+++|++    ++...+.|.||+.+|
T Consensus       200 T~lH---vAaa~Gy~e~~~lLl~-ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~----~d~~t~~g~~p~dv~  271 (527)
T KOG0505|consen  200 TALH---VAAANGYTEVAALLLQ-AGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGAD----MDAKTKMGETPLDVA  271 (527)
T ss_pred             hHHH---HHHhhhHHHHHHHHHH-hccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcc----cchhhhcCCCCccch
Confidence            9999   7888999999999998 8999999999999999999999999999999999999    899999999999999


Q ss_pred             hc
Q 037168          223 GI  224 (466)
Q Consensus       223 a~  224 (466)
                      ..
T Consensus       272 de  273 (527)
T KOG0505|consen  272 DE  273 (527)
T ss_pred             hh
Confidence            85

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.85  E-value=8.7e-21  Score=167.41  Aligned_cols=144  Identities=10%  Similarity=0.017  Sum_probs=122.9

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHH----HHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH--HHHHHHHHhCCC
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSD----LVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL--PVADKVLRKAPG   92 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~--~~v~~Ll~~~~~   92 (466)
                      .+.+..+.++.++||.||+.|+.+    +++.|++     .+..++.+|..|+||||+|+..|+..  +++++|++. +.
T Consensus        11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~-----~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-Ga   84 (166)
T PHA02743         11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISG-----DGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-GA   84 (166)
T ss_pred             hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhh-----cchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-CC
Confidence            445667888999999999999984    4445555     56678889999999999999998751  247888887 78


Q ss_pred             cccCcC-CCCChHHHHHHHcCCHHHHHHHHh-ccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCc
Q 037168           93 LLGMRN-NNGETALLRAARYGKVDIFNFLAG-KISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA  170 (466)
Q Consensus        93 ~~~~~d-~~G~tpLh~Aa~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~  170 (466)
                      +++.+| ..|+||||+|+..|+.+++++|++ .       +.+++.+|..|.||||   .|+..++.++++.|++ ++++
T Consensus        85 din~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~-------gad~~~~d~~g~tpL~---~A~~~~~~~iv~~Ll~-~ga~  153 (166)
T PHA02743         85 DINARELGTGNTLLHIAASTKNYELAEWLCRQL-------GVNLGAINYQHETAYH---IAYKMRDRRMMEILRA-NGAV  153 (166)
T ss_pred             CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc-------CCCccCcCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCC
Confidence            899998 589999999999999999999995 5       5788889999999999   7778899999999998 8899


Q ss_pred             ccccccCCC
Q 037168          171 VEHIDDEGR  179 (466)
Q Consensus       171 ~~~~d~~G~  179 (466)
                      ++.++..|.
T Consensus       154 ~~~~~~~~~  162 (166)
T PHA02743        154 CDDPLSIGL  162 (166)
T ss_pred             CCCcccCCc
Confidence            999888775

>PHA02741 hypothetical protein; Provisional

Probab=99.85  E-value=7.7e-21  Score=168.44  Aligned_cols=136  Identities=15%  Similarity=0.188  Sum_probs=117.2

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhC-CCCchhhhhccCCCCChHHHHHHHcCCc---HHHHHHHHHhCCCcccC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDEL-PDQSLDKMTRQNKAGNTILHETATSNHA---LPVADKVLRKAPGLLGM   96 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~d~~G~TpLh~Aa~~g~~---~~~v~~Ll~~~~~~~~~   96 (466)
                      ++..|..|+||||+|++.|+.++++.|+... ....+.+++.+|..|+||||+|+..|+.   .++++.|++. +.+++.
T Consensus        14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-gadin~   92 (169)
T PHA02741         14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-GADINA   92 (169)
T ss_pred             hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-CCCCCC
Confidence            4557889999999999999999999997643 1124678999999999999999999984   2788888887 778999


Q ss_pred             cCC-CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH
Q 037168           97 RNN-NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV  166 (466)
Q Consensus        97 ~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~  166 (466)
                      +|. +|+||||+|+..++.+++++|++..      +.+++.+|.+|+||||   .|...|+.++++.|++.
T Consensus        93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~------g~~~~~~n~~g~tpL~---~A~~~~~~~iv~~L~~~  154 (169)
T PHA02741         93 QEMLEGDTALHLAAHRRDHDLAEWLCCQP------GIDLHFCNADNKSPFE---LAIDNEDVAMMQILREI  154 (169)
T ss_pred             CCcCCCCCHHHHHHHcCCHHHHHHHHhCC------CCCCCcCCCCCCCHHH---HHHHCCCHHHHHHHHHH
Confidence            985 9999999999999999999999731      4678889999999999   77788999999999983

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.84  E-value=3e-21  Score=168.56  Aligned_cols=136  Identities=11%  Similarity=0.016  Sum_probs=87.2

Q ss_pred             hhhccCCCCChHHHHHHHcCCcHHHHHH---HHHhCCCcccCcCCCCChHHHHHHHcCCH---HHHHHHHhccCCCCCCC
Q 037168           58 KMTRQNKAGNTILHETATSNHALPVADK---VLRKAPGLLGMRNNNGETALLRAARYGKV---DIFNFLAGKISGYDHAT  131 (466)
Q Consensus        58 ~~~~~d~~G~TpLh~Aa~~g~~~~~v~~---Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~---~~v~~Ll~~~~~~~~~~  131 (466)
                      ..+.+|.+|.||||+|++.|+..++...   +....+..++.+|.+|+||||+|+..|+.   +++++|++.       +
T Consensus         9 ~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-------g   81 (154)
T PHA02736          9 FASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-------G   81 (154)
T ss_pred             HHHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc-------C
Confidence            4455666777777777777663121110   00111222345567777777777777765   346667766       5


Q ss_pred             ccccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          132 RLPFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       132 ~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      .+++.+| .+|+||||   .|+..|+.++++.|++..+.+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus        82 adin~~~~~~g~T~Lh---~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736         82 ADINGKERVFGNTPLH---IAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CCccccCCCCCCcHHH---HHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            5666666 36777777   555667777777777645677777777777888877777777777777777765

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.84  E-value=5.4e-21  Score=192.27  Aligned_cols=206  Identities=21%  Similarity=0.222  Sum_probs=174.4

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      ++|+.+.+ +++.++ ++.++..|..|.+|||+|+..|+.++++.++.+     .+.+|..+.+|.||||.|+++||. +
T Consensus        58 Lng~~~is-~llle~-ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q-----~d~~na~~~e~~tplhlaaqhgh~-d  129 (854)
T KOG0507|consen   58 LNGQNQIS-KLLLDY-EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQ-----TDILNAVNIENETPLHLAAQHGHL-E  129 (854)
T ss_pred             hcCchHHH-HHHhcc-hhhhhhhhccCcceEEehhhcCcchHHHHHHhc-----ccCCCcccccCcCccchhhhhcch-H
Confidence            45555544 455555 477888899999999999999999999999994     467899999999999999999997 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCC-CCcccccccCCCCChhhHHHHHhhcCcHHHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDH-ATRLPFLHRNDKTNVLHIAILSLHFGCIEIV  160 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v  160 (466)
                      ++.+|+.+ +++...+|+.+.|||-+|++.|..++++.|++..-.... ....-..++-.+-+|||   .|+++|+++++
T Consensus       130 vv~~Ll~~-~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plH---laakngh~~~~  205 (854)
T KOG0507|consen  130 VVFYLLKK-NADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLH---LAAKNGHVECM  205 (854)
T ss_pred             HHHHHHhc-CCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcc---hhhhcchHHHH
Confidence            99999998 778999999999999999999999999999986111000 01113345567899999   89999999999


Q ss_pred             HHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          161 KDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       161 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      +.|++ .|.++|...+.| |+||.|+..|..+++++|++.|.+    ...+|.+|.|+|.+-...
T Consensus       206 ~~ll~-ag~din~~t~~g-talheaalcgk~evvr~ll~~gin----~h~~n~~~qtaldil~d~  264 (854)
T KOG0507|consen  206 QALLE-AGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGIN----THIKNQHGQTALDIIIDL  264 (854)
T ss_pred             HHHHh-cCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccc----cccccccchHHHHHHHhc
Confidence            99998 899999877655 899999999999999999999988    889999999999887643

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.83  E-value=1.9e-20  Score=163.52  Aligned_cols=138  Identities=10%  Similarity=0.008  Sum_probs=110.7

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHH--hCCCCchhhhhccCCCCChHHHHHHHcCCcH--HHHHHHHHhCCCcccC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLD--ELPDQSLDKMTRQNKAGNTILHETATSNHAL--PVADKVLRKAPGLLGM   96 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~--~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~--~~v~~Ll~~~~~~~~~   96 (466)
                      .+..|.+|+||||+||+.|+.  ++.+..  ...+..+..++.+|.+|.||||+|+..|+..  ++++.|++. +.+++.
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~   86 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADING   86 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc-CCCccc
Confidence            456788999999999999984  333322  1122223456678999999999999998752  467888887 678999


Q ss_pred             cC-CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcc
Q 037168           97 RN-NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAV  171 (466)
Q Consensus        97 ~d-~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~  171 (466)
                      +| .+|+||||+|+..|+.+++++|++..      +.+++.+|..|+||||   .|+..|+.++++.|++ .+++.
T Consensus        87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~------g~d~n~~~~~g~tpL~---~A~~~~~~~i~~~Ll~-~ga~~  152 (154)
T PHA02736         87 KERVFGNTPLHIAVYTQNYELATWLCNQP------GVNMEILNYAFKTPYY---VACERHDAKMMNILRA-KGAQC  152 (154)
T ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHhCC------CCCCccccCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCC
Confidence            98 59999999999999999999999731      4678899999999999   6778899999999998 66554

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.82  E-value=1.2e-19  Score=172.79  Aligned_cols=156  Identities=12%  Similarity=0.019  Sum_probs=116.9

Q ss_pred             ccccCCCCCcH-HHHHHHcCCHHHHHHHHHhCCCCchhhhhcc----CCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc
Q 037168           21 LYVFTIHDDTV-LHMATYTKKSDLVIKLLDELPDQSLDKMTRQ----NKAGNTILHETATSNHALPVADKVLRKAPGLLG   95 (466)
Q Consensus        21 ~~~~~~~g~T~-Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~----d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~   95 (466)
                      +...|..|.|+ ||.|++.|+.++++.|++     +|++++.+    +..|.||||+|+..|+. ++++.|+++ |++++
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~-----~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~-eivklLL~~-GADVN   97 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILK-----LGADPEAPFPLSENSKTNPLIYAIDCDND-DAAKLLIRY-GADVN   97 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHH-----CCCCccccCcccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCcC
Confidence            34456676654 566667788899999998     45556665    45788999999888886 888888877 77888


Q ss_pred             Cc-CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc
Q 037168           96 MR-NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI  174 (466)
Q Consensus        96 ~~-d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~  174 (466)
                      .+ +..|.||||+|+..|+.+++++|++.       |++++.+|.+|.||||   .|+..++.+++..+.   +.   ..
T Consensus        98 ~~~~~~g~TpLh~Aa~~~~~eivklLL~~-------GAdin~kd~~G~TpL~---~A~~~~~~~~~~~~~---~~---~~  161 (300)
T PHA02884         98 RYAEEAKITPLYISVLHGCLKCLEILLSY-------GADINIQTNDMVTPIE---LALMICNNFLAFMIC---DN---EI  161 (300)
T ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHhCChhHHHHhc---CC---cc
Confidence            75 45788999999988999999998888       6788888888899999   555666666654443   22   24


Q ss_pred             ccCCChHHHHHHHcCChhHHHHHHhcCc
Q 037168          175 DDEGRNILHVAIKYRQLEIFERVVQMEI  202 (466)
Q Consensus       175 d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~  202 (466)
                      +..+.+|++++   ++.+++++|++++.
T Consensus       162 ~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        162 SNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             cccccChhhhh---ccHHHHHHHHHHHH
Confidence            66777888865   36788888888764

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.81  E-value=2.4e-19  Score=150.11  Aligned_cols=109  Identities=25%  Similarity=0.248  Sum_probs=65.1

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV  184 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~  184 (466)
                      +-+|+..+...-|+.|++..+      ..+|.+|.+|+||||   .|+++|+.+|++.|+. ++++.+.+...|+||||-
T Consensus        67 ~lwaae~nrl~eV~~lL~e~a------n~vNtrD~D~YTpLH---RAaYn~h~div~~ll~-~gAn~~a~T~~GWTPLhS  136 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKA------NHVNTRDEDEYTPLH---RAAYNGHLDIVHELLL-SGANKEAKTNEGWTPLHS  136 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhcc------ccccccccccccHHH---HHHhcCchHHHHHHHH-ccCCcccccccCccchhh
Confidence            345555566666665555432      344556666666666   5556666666666665 566666666666666666


Q ss_pred             HHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          185 AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       185 A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      ||+..+.+++..|+++|+|    +|++.+...||||+|+...+
T Consensus       137 AckWnN~~va~~LLqhgaD----VnA~t~g~ltpLhlaa~~rn  175 (228)
T KOG0512|consen  137 ACKWNNFEVAGRLLQHGAD----VNAQTKGLLTPLHLAAGNRN  175 (228)
T ss_pred             hhcccchhHHHHHHhccCc----ccccccccchhhHHhhcccc
Confidence            6666666666666666666    66666666666666665443

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.79  E-value=1.1e-18  Score=166.21  Aligned_cols=152  Identities=13%  Similarity=0.068  Sum_probs=125.5

Q ss_pred             hhccCCCCChH-HHHHHHcCCcHHHHHHHHHhCCCcccCc----CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcc
Q 037168           59 MTRQNKAGNTI-LHETATSNHALPVADKVLRKAPGLLGMR----NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRL  133 (466)
Q Consensus        59 ~~~~d~~G~Tp-Lh~Aa~~g~~~~~v~~Ll~~~~~~~~~~----d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~  133 (466)
                      +..+|..|.|+ ||.|++.|+. ++++.|+++ |++++.+    +..|.||||+|+..|+.+++++|+++       |++
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~-eivk~LL~~-GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~-------GAD   95 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYT-DIIDAILKL-GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY-------GAD   95 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCH-HHHHHHHHC-CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCC
Confidence            45578888875 5555666775 999999998 7788887    46899999999999999999999998       778


Q ss_pred             ccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCccccccccccc
Q 037168          134 PFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKID  212 (466)
Q Consensus       134 ~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d  212 (466)
                      ++.++ ..|.||||   .|+..|+.++++.|++ .|++++.+|..|.||||+|+..++.+++..+.  |.       ..|
T Consensus        96 VN~~~~~~g~TpLh---~Aa~~~~~eivklLL~-~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~-------~~~  162 (300)
T PHA02884         96 VNRYAEEAKITPLY---ISVLHGCLKCLEILLS-YGADINIQTNDMVTPIELALMICNNFLAFMIC--DN-------EIS  162 (300)
T ss_pred             cCcccCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC-------ccc
Confidence            88864 57999999   7778999999999998 89999999999999999999999988876654  21       257


Q ss_pred             CCCCCchhhhhccCcchhhhccC
Q 037168          213 YNGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       213 ~~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      ..|.+|++++.   +.++.+.|.
T Consensus       163 ~~~~~~~~~~~---n~ei~~~Li  182 (300)
T PHA02884        163 NFYKHPKKILI---NFDILKILV  182 (300)
T ss_pred             ccccChhhhhc---cHHHHHHHH
Confidence            77889999763   456665553

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.79  E-value=6e-19  Score=147.71  Aligned_cols=142  Identities=20%  Similarity=0.175  Sum_probs=123.9

Q ss_pred             HHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHH
Q 037168           69 ILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIA  148 (466)
Q Consensus        69 pLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A  148 (466)
                      -+-.|+..+.. ..|+.||+..+..+|.+|.+|.||||-|+.+|+.+|++.|+..       +++.+.+...|+||||  
T Consensus        66 l~lwaae~nrl-~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~-------gAn~~a~T~~GWTPLh--  135 (228)
T KOG0512|consen   66 LLLWAAEKNRL-TEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS-------GANKEAKTNEGWTPLH--  135 (228)
T ss_pred             HHHHHHhhccH-HHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc-------cCCcccccccCccchh--
Confidence            35678888886 8899999998999999999999999999999999999999988       7788899999999999  


Q ss_pred             HHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCCh-hHHHHHHh-cCcccccccccccCCCCCchhhhhccC
Q 037168          149 ILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQL-EIFERVVQ-MEIPLRRLVRKIDYNGNTIFHMAGIKR  226 (466)
Q Consensus       149 ~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~-~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLHlAa~~~  226 (466)
                       .|++..+.+++..||+ +|+++|...+...||||+||..++. ..+++|+. .+.+    ...++..+.||+.+|-+.+
T Consensus       136 -SAckWnN~~va~~LLq-hgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~----pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  136 -SACKWNNFEVAGRLLQ-HGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIH----PGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             -hhhcccchhHHHHHHh-ccCcccccccccchhhHHhhcccchHHHHHHHhhccccC----hhhhcCccchHHHHHHHhh
Confidence             8889999999999998 9999999999999999999998764 45666654 3444    6778899999999998765

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.78  E-value=9.8e-18  Score=171.13  Aligned_cols=205  Identities=21%  Similarity=0.223  Sum_probs=158.9

Q ss_pred             ccccccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc
Q 037168           19 HALYVFTIHDDTVLHMATYT---KKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG   95 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~   95 (466)
                      ..++.+...|+|.||.|.-+   ++.++++.|++..|+--.+........|+||||+|+.+.+. ++|+.|++. +++++
T Consensus       134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~-~~V~lLl~~-gADV~  211 (782)
T KOG3676|consen  134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDA-ELVRLLLAA-GADVH  211 (782)
T ss_pred             hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccH-HHHHHHHHc-CCchh
Confidence            44666778899999999974   45699999999766432333334456899999999999996 999999988 66666


Q ss_pred             Cc---------CC--------------CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHh
Q 037168           96 MR---------NN--------------NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSL  152 (466)
Q Consensus        96 ~~---------d~--------------~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~  152 (466)
                      .+         |.              -|+.||-+||-.++.|++++|+++       +++++.+|.+|+|.||..   .
T Consensus       212 aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~-------gAd~~aqDS~GNTVLH~l---V  281 (782)
T KOG3676|consen  212 ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH-------GADPNAQDSNGNTVLHML---V  281 (782)
T ss_pred             hHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc-------CCCCCccccCCChHHHHH---H
Confidence            42         11              378999999999999999999998       789999999999999954   4


Q ss_pred             hcCcHHHHHHHHHHCCCc--ccccccCCChHHHHHHHcCChhHHHHHHhcCcccc----------cccccccC--CCCCc
Q 037168          153 HFGCIEIVKDILSVYPQA--VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLR----------RLVRKIDY--NGNTI  218 (466)
Q Consensus       153 ~~g~~~~v~~Ll~~~~~~--~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~----------~~~~~~d~--~G~Tp  218 (466)
                      ..-..++.+.+++ +++.  ...+|++|-|||-+|++-|+.++++.+++......          -.++..|.  +-++.
T Consensus       282 i~~~~~My~~~L~-~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvtsslYpL~~iDT~~n~~Sv  360 (782)
T KOG3676|consen  282 IHFVTEMYDLALE-LGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVTSSLYPLNSIDTIGNENSV  360 (782)
T ss_pred             HHHHHHHHHHHHh-cCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccccccccchhcccccchhhh
Confidence            4477899999998 7777  88899999999999999999999999998711100          12445552  56788


Q ss_pred             hhhhhccCcchhhhccCC
Q 037168          219 FHMAGIKRKDYVAEKMEG  236 (466)
Q Consensus       219 LHlAa~~~~~~~~~~l~~  236 (466)
                      |.+.+.....+-.+++.+
T Consensus       361 Leivvyg~~~eHl~Ll~~  378 (782)
T KOG3676|consen  361 LEIVVYGIKNEHLELLDG  378 (782)
T ss_pred             hhhhhcCCcHHHHHHHhH
Confidence            888887644444444444

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.78  E-value=2.1e-19  Score=161.97  Aligned_cols=150  Identities=20%  Similarity=0.143  Sum_probs=117.0

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHH
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA   83 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v   83 (466)
                      |+.-+|.-+|++. +.+++.-|..|.+|||+||+.|+..+|+.|+.     .|+-+|..|....||||+|+.+||. ++|
T Consensus        11 gna~qvrlwld~t-ehdln~gddhgfsplhwaakegh~aivemll~-----rgarvn~tnmgddtplhlaaahghr-div   83 (448)
T KOG0195|consen   11 GNAFQVRLWLDDT-EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLS-----RGARVNSTNMGDDTPLHLAAAHGHR-DIV   83 (448)
T ss_pred             CCeEEEEEEecCc-ccccccccccCcchhhhhhhcccHHHHHHHHh-----cccccccccCCCCcchhhhhhcccH-HHH
Confidence            3334444455544 46678888899999999999999999999998     5566888888889999999999996 899


Q ss_pred             HHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHH
Q 037168           84 DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDI  163 (466)
Q Consensus        84 ~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~L  163 (466)
                      +.|++. .+++|..|..|.|||||||..|...+++-|+..       |+.+++++++|.|||.   .| +--..+.+..+
T Consensus        84 qkll~~-kadvnavnehgntplhyacfwgydqiaedli~~-------ga~v~icnk~g~tpld---ka-kp~l~~~l~e~  151 (448)
T KOG0195|consen   84 QKLLSR-KADVNAVNEHGNTPLHYACFWGYDQIAEDLISC-------GAAVNICNKKGMTPLD---KA-KPMLKNTLLEI  151 (448)
T ss_pred             HHHHHH-hcccchhhccCCCchhhhhhhcHHHHHHHHHhc-------cceeeecccCCCCchh---hh-chHHHHHHHHH
Confidence            999888 577999999999999999999999999999988       6788889999999998   33 22233444555


Q ss_pred             HHHCCCccc
Q 037168          164 LSVYPQAVE  172 (466)
Q Consensus       164 l~~~~~~~~  172 (466)
                      .++.|..+|
T Consensus       152 aek~gq~~n  160 (448)
T KOG0195|consen  152 AEKHGQSPN  160 (448)
T ss_pred             HHHhCCCCC
Confidence            555555554

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-16  Score=163.00  Aligned_cols=201  Identities=17%  Similarity=0.155  Sum_probs=162.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCC----chhhhhccCCCCChHHHHHHHc--CCcHHHHHHHHHhCCCcccCc----
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQ----SLDKMTRQNKAGNTILHETATS--NHALPVADKVLRKAPGLLGMR----   97 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~----~~~~~~~~d~~G~TpLh~Aa~~--g~~~~~v~~Ll~~~~~~~~~~----   97 (466)
                      .+.++..|...+..+....+++.....    ...+++.+...|+|.||.|..+  .+..++++.|++..|..+|..    
T Consensus       101 d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~e  180 (782)
T KOG3676|consen  101 DRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSE  180 (782)
T ss_pred             chhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhH
Confidence            347788888888888888887754211    1246777888999999999983  233489999999988777754    


Q ss_pred             CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCC--Cccccccc--------------CCCCChhhHHHHHhhcCcHHHHH
Q 037168           98 NNNGETALLRAARYGKVDIFNFLAGKISGYDHA--TRLPFLHR--------------NDKTNVLHIAILSLHFGCIEIVK  161 (466)
Q Consensus        98 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~--~~~~~~~d--------------~~g~TpLh~A~~a~~~g~~~~v~  161 (466)
                      .-.|+||||+|+.+.+.++|++|++.+++++..  |.-....|              .-|+.||-   .|+..++.|+++
T Consensus       181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLS---fAAC~nq~eivr  257 (782)
T KOG3676|consen  181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLS---FAACTNQPEIVR  257 (782)
T ss_pred             hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchH---HHHHcCCHHHHH
Confidence            247999999999999999999999996644221  11000011              24789999   788899999999


Q ss_pred             HHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          162 DILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       162 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +|++ +++|++.+|.+|+|+||..+.+-..++.++++++|++  .+...+|++|-|||-+||+.|+.++.+.+
T Consensus       258 lLl~-~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~--~l~~v~N~qgLTPLtLAaklGk~emf~~i  327 (782)
T KOG3676|consen  258 LLLA-HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN--ALEHVRNNQGLTPLTLAAKLGKKEMFQHI  327 (782)
T ss_pred             HHHh-cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC--ccccccccCCCChHHHHHHhhhHHHHHHH
Confidence            9999 9999999999999999999999999999999999987  56788999999999999999999987554

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.6e-18  Score=156.22  Aligned_cols=134  Identities=22%  Similarity=0.230  Sum_probs=105.7

Q ss_pred             HHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHH
Q 037168           36 TYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVD  115 (466)
Q Consensus        36 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~  115 (466)
                      |+.|+.--|+.-++.    ...++|.-|..|.+|||+||+.|+. .+++.|+.. |+.+|..|....||||+|+.+||.+
T Consensus         8 cregna~qvrlwld~----tehdln~gddhgfsplhwaakegh~-aivemll~r-garvn~tnmgddtplhlaaahghrd   81 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDD----TEHDLNVGDDHGFSPLHWAAKEGHV-AIVEMLLSR-GARVNSTNMGDDTPLHLAAAHGHRD   81 (448)
T ss_pred             hhcCCeEEEEEEecC----cccccccccccCcchhhhhhhcccH-HHHHHHHhc-ccccccccCCCCcchhhhhhcccHH
Confidence            455555555555553    3456788888888888888888886 888888887 6778888888888888888888888


Q ss_pred             HHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHH
Q 037168          116 IFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAI  186 (466)
Q Consensus       116 ~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~  186 (466)
                      +|+.|+++       .+++|..+..|+||||   +||..|.-.+.+-|+. +|+.++..+++|.|||..|-
T Consensus        82 ivqkll~~-------kadvnavnehgntplh---yacfwgydqiaedli~-~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   82 IVQKLLSR-------KADVNAVNEHGNTPLH---YACFWGYDQIAEDLIS-CGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHHHHHHH-------hcccchhhccCCCchh---hhhhhcHHHHHHHHHh-ccceeeecccCCCCchhhhc
Confidence            88888887       5688888888888888   5557788888888887 88888888888888887663

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.72  E-value=5.7e-18  Score=175.33  Aligned_cols=208  Identities=18%  Similarity=0.138  Sum_probs=180.4

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      ..+-+|+|-.||+.|+.|.|++|+.     .|+++..+|+.|.+||-+|+..||. .+|+.|++++.+.-...|+.+.|+
T Consensus       754 e~n~~t~LT~acaggh~e~vellv~-----rganiehrdkkgf~plImaatagh~-tvV~~llk~ha~veaQsdrtkdt~  827 (2131)
T KOG4369|consen  754 EPNIKTNLTSACAGGHREEVELLVV-----RGANIEHRDKKGFVPLIMAATAGHI-TVVQDLLKAHADVEAQSDRTKDTM  827 (2131)
T ss_pred             CccccccccccccCccHHHHHHHHH-----hcccccccccccchhhhhhcccCch-HHHHHHHhhhhhhhhhcccccCce
Confidence            3456899999999999999999999     5677889999999999999999997 999999998766555678999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc--cCCChHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID--DEGRNIL  182 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d--~~G~t~L  182 (466)
                      |.+||..|+.++|++|+..       +++-..++-...|||-   .+...|.+++++.|+. .|..+|.+.  +.|-.||
T Consensus       828 lSlacsggr~~vvelLl~~-------gankehrnvsDytPls---la~Sggy~~iI~~llS-~GseInSrtgSklgisPL  896 (2131)
T KOG4369|consen  828 LSLACSGGRTRVVELLLNA-------GANKEHRNVSDYTPLS---LARSGGYTKIIHALLS-SGSEINSRTGSKLGISPL  896 (2131)
T ss_pred             EEEecCCCcchHHHHHHHh-------hccccccchhhcCchh---hhcCcchHHHHHHHhh-cccccccccccccCcchh
Confidence            9999999999999999998       4455566777899999   8889999999999998 898888875  6799999


Q ss_pred             HHHHHcCChhHHHHHHhcCcccccccccc-cCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccc
Q 037168          183 HVAIKYRQLEIFERVVQMEIPLRRLVRKI-DYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLN  261 (466)
Q Consensus       183 h~A~~~~~~~iv~~Ll~~g~~~~~~~~~~-d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~  261 (466)
                      .+|.++|+.+.++.|++.|.|    +|.+ ..+-||+|-+|+-.|+.+++.+|..                   ....+.
T Consensus       897 mlatmngh~~at~~ll~~gsd----iNaqIeTNrnTaltla~fqgr~evv~lLLa-------------------~~anve  953 (2131)
T KOG4369|consen  897 MLATMNGHQAATLSLLQPGSD----INAQIETNRNTALTLALFQGRPEVVFLLLA-------------------AQANVE  953 (2131)
T ss_pred             hhhhhccccHHHHHHhcccch----hccccccccccceeeccccCcchHHHHHHH-------------------Hhhhhh
Confidence            999999999999999999988    6665 4778999999999999999866622                   223457


Q ss_pred             cccCCCCChHH
Q 037168          262 HRNNMGFIPEE  272 (466)
Q Consensus       262 ~~n~~g~Tp~~  272 (466)
                      ++-+.|.||+.
T Consensus       954 hRaktgltplm  964 (2131)
T KOG4369|consen  954 HRAKTGLTPLM  964 (2131)
T ss_pred             hhcccCCcccc
Confidence            78889999974

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.70  E-value=3.7e-17  Score=169.43  Aligned_cols=248  Identities=15%  Similarity=0.024  Sum_probs=194.1

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh-ccCCCCChHHHHHHHcCCcHHH
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT-RQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      |+.|++..++.++  +++..+|+.|.+||.+|+-.||..+|+.|++.     .++++ ..|+.+.|+|.+||..|.. ++
T Consensus       768 gh~e~vellv~rg--aniehrdkkgf~plImaatagh~tvV~~llk~-----ha~veaQsdrtkdt~lSlacsggr~-~v  839 (2131)
T KOG4369|consen  768 GHREEVELLVVRG--ANIEHRDKKGFVPLIMAATAGHITVVQDLLKA-----HADVEAQSDRTKDTMLSLACSGGRT-RV  839 (2131)
T ss_pred             ccHHHHHHHHHhc--ccccccccccchhhhhhcccCchHHHHHHHhh-----hhhhhhhcccccCceEEEecCCCcc-hH
Confidence            4555555555554  88999999999999999999999999999994     44454 5688999999999999986 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccc--cCCCCChhhHHHHHhhcCcHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLH--RNDKTNVLHIAILSLHFGCIEIV  160 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~--d~~g~TpLh~A~~a~~~g~~~~v  160 (466)
                      |++||.. +++-..+|-...|||.+|...|..++++.|+..+.       .++.+  .+.|-+||+   .+...|+.+..
T Consensus       840 velLl~~-gankehrnvsDytPlsla~Sggy~~iI~~llS~Gs-------eInSrtgSklgisPLm---latmngh~~at  908 (2131)
T KOG4369|consen  840 VELLLNA-GANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGS-------EINSRTGSKLGISPLM---LATMNGHQAAT  908 (2131)
T ss_pred             HHHHHHh-hccccccchhhcCchhhhcCcchHHHHHHHhhccc-------ccccccccccCcchhh---hhhhccccHHH
Confidence            9999988 67778889999999999999999999999999844       33333  356899999   78889999999


Q ss_pred             HHHHHHCCCccccc-ccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhh
Q 037168          161 KDILSVYPQAVEHI-DDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPAL  239 (466)
Q Consensus       161 ~~Ll~~~~~~~~~~-d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~  239 (466)
                      +.|++ .+.++|.. .-+-+|+|-+|+-.|+.|++.+|+...++    +..+-+.|-|||.-++..|..++-.+|..++.
T Consensus       909 ~~ll~-~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~an----vehRaktgltplme~AsgGyvdvg~~li~~ga  983 (2131)
T KOG4369|consen  909 LSLLQ-PGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQAN----VEHRAKTGLTPLMEMASGGYVDVGNLLIAAGA  983 (2131)
T ss_pred             HHHhc-ccchhccccccccccceeeccccCcchHHHHHHHHhhh----hhhhcccCCcccchhhcCCccccchhhhhccc
Confidence            99998 77888765 34678999999999999999999988777    77888999999999999998887766643322


Q ss_pred             hhhh---------------HhhHHhhhhhcC-cccccccccCCCCChHHHHH
Q 037168          240 LLQD---------------ELLWYERVKSVT-MPHFLNHRNNMGFIPEELFA  275 (466)
Q Consensus       240 ~l~~---------------~~~~~~~v~~~~-~~~~~~~~n~~g~Tp~~l~~  275 (466)
                      +...               +-...+.+..+. ...-++.+|++|.|++-++.
T Consensus       984 d~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~ 1035 (2131)
T KOG4369|consen  984 DTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLAS 1035 (2131)
T ss_pred             ccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhc
Confidence            2110               000111222222 23456889999999987654

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.68  E-value=6e-16  Score=128.91  Aligned_cols=125  Identities=27%  Similarity=0.353  Sum_probs=107.8

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE  102 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~  102 (466)
                      ..|.+|.||||.|+..|+.++++.|++.+.     ..+..+..|.||||+|+..++. ++++.|++. +..++..|..|.
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~-----~~~~~~~~g~~~l~~a~~~~~~-~~~~~ll~~-~~~~~~~~~~~~   74 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGA-----DVNAKDNDGRTPLHLAAKNGHL-EIVKLLLEK-GADVNARDKDGN   74 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCC-----CCCccCCCCCcHHHHHHHcCCH-HHHHHHHHc-CCCccccCCCCC
Confidence            356789999999999999999999999543     4477899999999999999996 999999998 456888899999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDIL  164 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll  164 (466)
                      ||+|+|+..++.+++++|++.       +.+.+..|..|.||+|   .+...++.++++.|+
T Consensus        75 ~~l~~a~~~~~~~~~~~L~~~-------~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~Ll  126 (126)
T cd00204          75 TPLHLAARNGNLDVVKLLLKH-------GADVNARDKDGRTPLH---LAAKNGHLEVVKLLL  126 (126)
T ss_pred             CHHHHHHHcCcHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHhcCCHHHHHHhC
Confidence            999999999999999999998       4456677888999999   556668888888764

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.68  E-value=6.9e-16  Score=128.52  Aligned_cols=124  Identities=29%  Similarity=0.414  Sum_probs=89.4

Q ss_pred             cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC
Q 037168           62 QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK  141 (466)
Q Consensus        62 ~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g  141 (466)
                      +|.+|.||||+|+..++. ++++.|++. +...+.++..|.||||.|+..++.+++++|++.       +...+..+..|
T Consensus         3 ~~~~g~t~l~~a~~~~~~-~~i~~li~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-------~~~~~~~~~~~   73 (126)
T cd00204           3 RDEDGRTPLHLAASNGHL-EVVKLLLEN-GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEK-------GADVNARDKDG   73 (126)
T ss_pred             cCcCCCCHHHHHHHcCcH-HHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-------CCCccccCCCC
Confidence            456777888888877775 777777776 444567777777888888777777777777776       33455566677


Q ss_pred             CChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHH
Q 037168          142 TNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVV  198 (466)
Q Consensus       142 ~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll  198 (466)
                      .||+|   .|...++.++++.|++ .+.+.+..|..|.||+|.|+..++.+++++|+
T Consensus        74 ~~~l~---~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          74 NTPLH---LAARNGNLDVVKLLLK-HGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             CCHHH---HHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            77777   5566777777777777 56667777777777777777777777777653

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.66  E-value=4.8e-16  Score=122.27  Aligned_cols=89  Identities=25%  Similarity=0.341  Sum_probs=76.3

Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHc
Q 037168           32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARY  111 (466)
Q Consensus        32 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~  111 (466)
                      ||+||+.|+.++++.|++.+.     +++.    |+||||+|+..|+. +++++|++. +.+++.+|.+|+||||+|+.+
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~-----~~~~----~~~~l~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~   69 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGA-----DINL----GNTALHYAAENGNL-EIVKLLLEN-GADINSQDKNGNTALHYAAEN   69 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTS-----TTTS----SSBHHHHHHHTTTH-HHHHHHHHT-TTCTT-BSTTSSBHHHHHHHT
T ss_pred             CHHHHHcCCHHHHHHHHHCcC-----CCCC----CCCHHHHHHHcCCH-HHHHHHHHh-cccccccCCCCCCHHHHHHHc
Confidence            799999999999999999543     3333    89999999999996 999999998 678999999999999999999


Q ss_pred             CCHHHHHHHHhccCCCCCCCccccccc
Q 037168          112 GKVDIFNFLAGKISGYDHATRLPFLHR  138 (466)
Q Consensus       112 g~~~~v~~Ll~~~~~~~~~~~~~~~~d  138 (466)
                      |+.+++++|+++       +.+++.+|
T Consensus        70 ~~~~~~~~Ll~~-------g~~~~~~n   89 (89)
T PF12796_consen   70 GNLEIVKLLLEH-------GADVNIRN   89 (89)
T ss_dssp             THHHHHHHHHHT-------TT-TTSS-
T ss_pred             CCHHHHHHHHHc-------CCCCCCcC
Confidence            999999999998       45555543

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.63  E-value=1.3e-15  Score=119.79  Aligned_cols=89  Identities=29%  Similarity=0.344  Sum_probs=66.4

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV  184 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~  184 (466)
                      ||+|++.|+.+++++|++..       .+.+.    |+||||   .|+..|+.+++++|++ .+.+++.+|.+|+||||+
T Consensus         1 L~~A~~~~~~~~~~~ll~~~-------~~~~~----~~~~l~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~   65 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKG-------ADINL----GNTALH---YAAENGNLEIVKLLLE-NGADINSQDKNGNTALHY   65 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTT-------STTTS----SSBHHH---HHHHTTTHHHHHHHHH-TTTCTT-BSTTSSBHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCc-------CCCCC----CCCHHH---HHHHcCCHHHHHHHHH-hcccccccCCCCCCHHHH
Confidence            68888888888888888763       23322    778888   6667788888888887 777888888888888888


Q ss_pred             HHHcCChhHHHHHHhcCccccccccccc
Q 037168          185 AIKYRQLEIFERVVQMEIPLRRLVRKID  212 (466)
Q Consensus       185 A~~~~~~~iv~~Ll~~g~~~~~~~~~~d  212 (466)
                      |+.+|+.+++++|+++|++    ++.+|
T Consensus        66 A~~~~~~~~~~~Ll~~g~~----~~~~n   89 (89)
T PF12796_consen   66 AAENGNLEIVKLLLEHGAD----VNIRN   89 (89)
T ss_dssp             HHHTTHHHHHHHHHHTTT-----TTSS-
T ss_pred             HHHcCCHHHHHHHHHcCCC----CCCcC
Confidence            8888888888888888877    55554

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.53  E-value=9.9e-14  Score=128.03  Aligned_cols=128  Identities=20%  Similarity=0.263  Sum_probs=100.8

Q ss_pred             hccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCC-----HHHHHHHHhccCCCCCCCc--
Q 037168           60 TRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGK-----VDIFNFLAGKISGYDHATR--  132 (466)
Q Consensus        60 ~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~-----~~~v~~Ll~~~~~~~~~~~--  132 (466)
                      ...+..+.+++|.++..+.. ++++.++.. +.+++.+|..|.||||+|+..|+     .++++.|++.       +.  
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~-------g~~~  137 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDD-KIVKLLLAS-GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA-------GADL  137 (235)
T ss_pred             ccCCccccCHHHHHHHcCcH-HHHHHHHHc-CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHc-------CCCC
Confidence            44566678888888888875 777777777 55568888888888888888888     8888888887       44  


Q ss_pred             -ccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhc
Q 037168          133 -LPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM  200 (466)
Q Consensus       133 -~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~  200 (466)
                       ..+.+|.+|+||||   .|+..|+.++++.+++ .+++++.+|..|.|++|.|+..++.++++.+++.
T Consensus       138 ~~~~~~~~~g~tpl~---~A~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~  202 (235)
T COG0666         138 DVNNLRDEDGNTPLH---WAALNGDADIVELLLE-AGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK  202 (235)
T ss_pred             CCccccCCCCCchhH---HHHHcCchHHHHHHHh-cCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence             55566888888888   6667788888888887 6788888888888888888888888888888874

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.53  E-value=2e-13  Score=125.93  Aligned_cols=132  Identities=22%  Similarity=0.199  Sum_probs=117.8

Q ss_pred             CCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhh--cCcHHHHHHHHHHCC
Q 037168           91 PGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLH--FGCIEIVKDILSVYP  168 (466)
Q Consensus        91 ~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~--~g~~~~v~~Ll~~~~  168 (466)
                      .......+..+.+++|.++..+..+++++++..       +.+++.+|.+|.||||+|+....  .++.++++.|++ .+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~-~g  134 (235)
T COG0666          63 DRHLAARDLDGRLPLHSAASKGDDKIVKLLLAS-------GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLE-AG  134 (235)
T ss_pred             ccccccCCccccCHHHHHHHcCcHHHHHHHHHc-------CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHH-cC
Confidence            344567778899999999999999999999988       67889999999999999988776  578999999999 55


Q ss_pred             C---cccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          169 Q---AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       169 ~---~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +   ..+.+|..|+||||+|+..|+.+++++|++.|++    ++..|..|.|++|.|+..++..+...+
T Consensus       135 ~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~l  199 (235)
T COG0666         135 ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGAD----PNSRNSYGVTALDPAAKNGRIELVKLL  199 (235)
T ss_pred             CCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCC----CcccccCCCcchhhhcccchHHHHHHH
Confidence            5   7777899999999999999999999999999998    888899999999999999988776544

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.44  E-value=6.5e-14  Score=99.44  Aligned_cols=56  Identities=29%  Similarity=0.356  Sum_probs=33.4

Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA  222 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA  222 (466)
                      ||+..+.+++.+|..|+||||+|+.+|+.+++++|++.|++    ++.+|++|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d----~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD----PNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT------TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC----CCCCcCCCCCHHHhC
Confidence            45545689999999999999999999999999999999998    999999999999987

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.40  E-value=8.8e-13  Score=99.24  Aligned_cols=103  Identities=19%  Similarity=0.183  Sum_probs=84.0

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRA  108 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A  108 (466)
                      +--..+++++|..+-|+..+.++     .++|.. ..|++|||+|+-.|.. ++.++|+.. |++++.+|+.|-|||--|
T Consensus         3 d~~~~W~vkNG~~DeVk~~v~~g-----~nVn~~-~ggR~plhyAAD~GQl-~ilefli~i-GA~i~~kDKygITPLLsA   74 (117)
T KOG4214|consen    3 DMSVAWNVKNGEIDEVKQSVNEG-----LNVNEI-YGGRTPLHYAADYGQL-SILEFLISI-GANIQDKDKYGITPLLSA   74 (117)
T ss_pred             chhHhhhhccCcHHHHHHHHHcc-----ccHHHH-hCCcccchHhhhcchH-HHHHHHHHh-ccccCCccccCCcHHHHH
Confidence            34567889999999999988843     345543 3789999999999997 999999988 788999999999999999


Q ss_pred             HHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhh
Q 037168          109 ARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLH  146 (466)
Q Consensus       109 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh  146 (466)
                      +..||.++|++|++.       |++-..+..+|.+.+.
T Consensus        75 vwEGH~~cVklLL~~-------GAdrt~~~PdG~~~~e  105 (117)
T KOG4214|consen   75 VWEGHRDCVKLLLQN-------GADRTIHAPDGTALIE  105 (117)
T ss_pred             HHHhhHHHHHHHHHc-------CcccceeCCCchhHHh
Confidence            999999999999998       5566666677876655

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.37  E-value=1.4e-12  Score=98.14  Aligned_cols=95  Identities=14%  Similarity=0.087  Sum_probs=83.3

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      -+|+.++|.+...++  .+++.+- .|++|||+|+..|+.+++++|+.     .|++++.+|+.|-|||--|+..||. +
T Consensus        11 kNG~~DeVk~~v~~g--~nVn~~~-ggR~plhyAAD~GQl~ilefli~-----iGA~i~~kDKygITPLLsAvwEGH~-~   81 (117)
T KOG4214|consen   11 KNGEIDEVKQSVNEG--LNVNEIY-GGRTPLHYAADYGQLSILEFLIS-----IGANIQDKDKYGITPLLSAVWEGHR-D   81 (117)
T ss_pred             ccCcHHHHHHHHHcc--ccHHHHh-CCcccchHhhhcchHHHHHHHHH-----hccccCCccccCCcHHHHHHHHhhH-H
Confidence            479999999999987  5555543 89999999999999999999999     6678999999999999999999996 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALL  106 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh  106 (466)
                      +|++|++. |++-..+..+|.+.+-
T Consensus        82 cVklLL~~-GAdrt~~~PdG~~~~e  105 (117)
T KOG4214|consen   82 CVKLLLQN-GADRTIHAPDGTALIE  105 (117)
T ss_pred             HHHHHHHc-CcccceeCCCchhHHh
Confidence            99999998 7777778888877654

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.37  E-value=2.3e-12  Score=137.57  Aligned_cols=109  Identities=15%  Similarity=0.025  Sum_probs=94.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHH
Q 037168           31 VLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAAR  110 (466)
Q Consensus        31 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~  110 (466)
                      .||.|+..|+.+.++.|++     .+++++.+|..|+||||+|+..|+. +++++|++. +++++.+|.+|.||||+|+.
T Consensus        85 ~L~~aa~~G~~~~vk~LL~-----~Gadin~~d~~G~TpLh~Aa~~g~~-eiv~~LL~~-Gadvn~~d~~G~TpLh~A~~  157 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLT-----GGADPNCRDYDGRTPLHIACANGHV-QVVRVLLEF-GADPTLLDKDGKTPLELAEE  157 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCcHHHHHHHCCCH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHH
Confidence            4889999999999999999     5567889999999999999999996 999999998 78899999999999999999


Q ss_pred             cCCHHHHHHHHhccCCCCCCCcccccccCCCCChhh
Q 037168          111 YGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLH  146 (466)
Q Consensus       111 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh  146 (466)
                      .|+.+++++|++++......+++.+..+.+|.+|+.
T Consensus       158 ~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~  193 (664)
T PTZ00322        158 NGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSL  193 (664)
T ss_pred             CCcHHHHHHHHhCCCcccccCCCCCccccCCCCccc
Confidence            999999999998844333335566666777777766

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.35  E-value=2.9e-12  Score=136.82  Aligned_cols=106  Identities=16%  Similarity=0.181  Sum_probs=93.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL  182 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L  182 (466)
                      ++|+.|+..|+.++++.|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+++++.+|.+|+|||
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~-------Gadin~~d~~G~TpLh---~Aa~~g~~eiv~~LL~-~Gadvn~~d~~G~TpL  152 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTG-------GADPNCRDYDGRTPLH---IACANGHVQVVRVLLE-FGADPTLLDKDGKTPL  152 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHC-------CCCCCCcCCCCCcHHH---HHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHH
Confidence            458899999999999999988       6788889999999999   7778899999999998 7999999999999999


Q ss_pred             HHHHHcCChhHHHHHHhc-------CcccccccccccCCCCCchhhhh
Q 037168          183 HVAIKYRQLEIFERVVQM-------EIPLRRLVRKIDYNGNTIFHMAG  223 (466)
Q Consensus       183 h~A~~~~~~~iv~~Ll~~-------g~~~~~~~~~~d~~G~TpLHlAa  223 (466)
                      |+|+.+|+.+++++|+++       |++    .+..+..|++|+-.+.
T Consensus       153 h~A~~~g~~~iv~~Ll~~~~~~~~~ga~----~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        153 ELAEENGFREVVQLLSRHSQCHFELGAN----AKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHCCcHHHHHHHHhCCCcccccCCC----CCccccCCCCccchhh
Confidence            999999999999999988       655    7778888888877665

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.35  E-value=6.7e-13  Score=94.21  Aligned_cols=50  Identities=30%  Similarity=0.359  Sum_probs=18.1

Q ss_pred             hhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHH
Q 037168           57 DKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRA  108 (466)
Q Consensus        57 ~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A  108 (466)
                      .+++.+|..|+||||+||..|+. +++++|+ ..+.+++.+|.+|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~-~~v~~Ll-~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHS-EVVRLLL-QNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-H-HHHHHHH-HCT--TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcH-HHHHHHH-HCcCCCCCCcCCCCCHHHhC
Confidence            34555555555555555555553 5555555 33555555555555555554

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.34  E-value=2.2e-12  Score=90.99  Aligned_cols=53  Identities=32%  Similarity=0.487  Sum_probs=23.8

Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHH
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL  120 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~L  120 (466)
                      |.||||+|++.|+. +++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|
T Consensus         1 g~t~lh~A~~~g~~-~~~~~Ll~~-~~din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    1 GRTPLHWAARSGNL-EIVKLLLEH-GADINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SSBHHHHHHHTT-H-HHHHHHHHT-TSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             CChHHHHHHHhCCH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            34555555555553 555555544 344555555555555555555555555544

...

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.34  E-value=2.2e-12  Score=90.93  Aligned_cols=54  Identities=26%  Similarity=0.331  Sum_probs=44.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL   87 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll   87 (466)
                      |.||||.||+.|+.+++++|++     .+.+++.+|.+|+||||+|+..|+. +++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~-----~~~din~~d~~g~t~lh~A~~~g~~-~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLE-----HGADINAQDEDGRTPLHYAAKNGNI-DIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHH-----TTSGTT-B-TTS--HHHHHHHTT-H-HHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHccCH-HHHHHHC
Confidence            7899999999999999999999     5567899999999999999999996 9999886

...

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.32  E-value=4.3e-12  Score=123.49  Aligned_cols=119  Identities=18%  Similarity=0.190  Sum_probs=97.8

Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHc
Q 037168           32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARY  111 (466)
Q Consensus        32 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~  111 (466)
                      |.-|+..|..|+|+..+.+.     .+....|.+|-|+||-|+..||. +||++|++. ++++|..|++||||||.||+.
T Consensus       554 LLDaaLeGEldlVq~~i~ev-----~DpSqpNdEGITaLHNAiCaghy-eIVkFLi~~-ganVNa~DSdGWTPLHCAASC  626 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEV-----TDPSQPNDEGITALHNAICAGHY-EIVKFLIEF-GANVNAADSDGWTPLHCAASC  626 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhh-----cCCCCCCccchhHHhhhhhcchh-HHHHHHHhc-CCcccCccCCCCchhhhhhhc
Confidence            55688999999999999954     45678899999999999999998 999999998 889999999999999999999


Q ss_pred             CCHHHHHHHHhccCCCCCCCccccc-ccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168          112 GKVDIFNFLAGKISGYDHATRLPFL-HRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus       112 g~~~~v~~Ll~~~~~~~~~~~~~~~-~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      ++..+++.|++.+.       .+.. .-.++.|+..-+ .--..|..++.++|-.
T Consensus       627 Nnv~~ckqLVe~Ga-------avfAsTlSDmeTa~eKC-ee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  627 NNVPMCKQLVESGA-------AVFASTLSDMETAAEKC-EEMEEGYDQCSQYLYG  673 (752)
T ss_pred             CchHHHHHHHhccc-------eEEeeecccccchhhhc-chhhhhHHHHHHHHHH
Confidence            99999999999843       3333 336788887621 2234577777777754

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.30  E-value=1.6e-11  Score=111.30  Aligned_cols=120  Identities=17%  Similarity=0.199  Sum_probs=103.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc-CcCCCCChHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG-MRNNNGETALL  106 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~-~~d~~G~tpLh  106 (466)
                      -..||..++..|+.+....||+     ....+|.+|..|.|+|..|+..|+. ++++.|++. ++++| .++..+.||||
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs-----~vr~vn~~D~sGMs~LahAaykGnl-~~v~lll~~-gaDvN~~qhg~~YTpLm   84 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLS-----TVRQVNQRDPSGMSVLAHAAYKGNL-TLVELLLEL-GADVNDKQHGTLYTPLM   84 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHH-----HhhhhhccCCCcccHHHHHHhcCcH-HHHHHHHHh-CCCcCcccccccccHHH
Confidence            3578999999999999999998     4567899999999999999999997 999999999 55555 46788999999


Q ss_pred             HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHH
Q 037168          107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDIL  164 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll  164 (466)
                      +|+..|+.++.+.|++.       |+..+..|.-|+|+-.   +|+.-|+-++|..+=
T Consensus        85 FAALSGn~dvcrlllda-------Ga~~~~vNsvgrTAaq---mAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   85 FAALSGNQDVCRLLLDA-------GARMYLVNSVGRTAAQ---MAAFVGHHECVAIIN  132 (396)
T ss_pred             HHHHcCCchHHHHHHhc-------cCccccccchhhhHHH---HHHHhcchHHHHHHh
Confidence            99999999999999998       6778888889999999   677778888877653

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.26  E-value=1.2e-11  Score=120.38  Aligned_cols=114  Identities=18%  Similarity=0.187  Sum_probs=100.1

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      ++|+.+-|.+.+.+-  .+....+..|-|+||-|+..||.++|++||+     .++++|..|.+|+||||+||..++. .
T Consensus       559 LeGEldlVq~~i~ev--~DpSqpNdEGITaLHNAiCaghyeIVkFLi~-----~ganVNa~DSdGWTPLHCAASCNnv-~  630 (752)
T KOG0515|consen  559 LEGELDLVQRIIYEV--TDPSQPNDEGITALHNAICAGHYEIVKFLIE-----FGANVNAADSDGWTPLHCAASCNNV-P  630 (752)
T ss_pred             hcchHHHHHHHHHhh--cCCCCCCccchhHHhhhhhcchhHHHHHHHh-----cCCcccCccCCCCchhhhhhhcCch-H
Confidence            578999999999887  6688899999999999999999999999999     6788999999999999999999997 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHH--HcCCHHHHHHHHhc
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAA--RYGKVDIFNFLAGK  123 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa--~~g~~~~v~~Ll~~  123 (466)
                      +|+.|++.+++..-..=+++.|+..-+=  ..|..+|.++|...
T Consensus       631 ~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  631 MCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             HHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            9999999977766677788999877653  34788899988753

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.22  E-value=5e-11  Score=108.19  Aligned_cols=113  Identities=23%  Similarity=0.170  Sum_probs=98.6

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh-ccCCCCChHHHHHHHcCCcH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT-RQNKAGNTILHETATSNHAL   80 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~d~~G~TpLh~Aa~~g~~~   80 (466)
                      =+||.+....+|..-  ..++..|.+|.|+|..|+..|+.++|+.||+.+     +++| .++..+.||||+||.+|+. 
T Consensus        21 ~Kndt~~a~~LLs~v--r~vn~~D~sGMs~LahAaykGnl~~v~lll~~g-----aDvN~~qhg~~YTpLmFAALSGn~-   92 (396)
T KOG1710|consen   21 DKNDTEAALALLSTV--RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELG-----ADVNDKQHGTLYTPLMFAALSGNQ-   92 (396)
T ss_pred             ccCcHHHHHHHHHHh--hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhC-----CCcCcccccccccHHHHHHHcCCc-
Confidence            367888888888774  568899999999999999999999999999954     4455 3567899999999999996 


Q ss_pred             HHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168           81 PVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK  123 (466)
Q Consensus        81 ~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~  123 (466)
                      ++++.|++. |+.....|+-|+|+-.+|+.-|+.++|..+=.+
T Consensus        93 dvcrlllda-Ga~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   93 DVCRLLLDA-GARMYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             hHHHHHHhc-cCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            999999998 777899999999999999999999999877544

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.82  E-value=8.5e-09  Score=101.49  Aligned_cols=114  Identities=23%  Similarity=0.317  Sum_probs=98.9

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .+|.-++++....+  ..+-.++.+..|.||+|+..|+-|+|+++++++|.   +.+++.|..|+|+||-|+..++. .+
T Consensus       876 ~~D~~klqE~h~~g--g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~---elld~~de~get~lhkaa~~~~r-~v  949 (1004)
T KOG0782|consen  876 SSDLMKLQETHLNG--GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS---ELLDMADETGETALHKAACQRNR-AV  949 (1004)
T ss_pred             hccHHHHHHHHhcC--CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH---HHHHHHhhhhhHHHHHHHHhcch-HH
Confidence            45666666666665  45667788999999999999999999999998875   57888999999999999999986 89


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK  123 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~  123 (466)
                      +++|++. |+.+...|..|.||-.-|-+.|+.+..-||-..
T Consensus       950 c~~lvda-gasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  950 CQLLVDA-GASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHhc-chhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999988 777899999999999999999999999998654

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.74  E-value=1.1e-08  Score=99.07  Aligned_cols=94  Identities=14%  Similarity=0.097  Sum_probs=86.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      +.++..++++|++.|+...++.+.-     .+.+++.+|.+.+|+||.||..|+. +++|+|++..+.+.+.+|..|+||
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l-----~g~D~~~~DyD~RTaLHvAAaEG~v-~v~kfl~~~~kv~~~~kDRw~rtP  576 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFAL-----QGMDLETKDYDDRTALHVAAAEGHV-EVVKFLLNACKVDPDPKDRWGRTP  576 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHH-----hcccccccccccchhheeecccCce-eHHHHHHHHHcCCCChhhccCCCc
Confidence            4456678999999999999999887     5678999999999999999999997 999999999999999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhcc
Q 037168          105 LLRAARYGKVDIFNFLAGKI  124 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~  124 (466)
                      |.-|-..+|.+++++|-+..
T Consensus       577 lDdA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  577 LDDAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             chHhHhcCcHHHHHHHHHHh
Confidence            99999999999999998763

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.68  E-value=1.2e-08  Score=104.69  Aligned_cols=101  Identities=21%  Similarity=0.219  Sum_probs=88.3

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCC-CCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNK-AGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~-~G~TpLh~Aa~~g~~~~   81 (466)
                      +|...++..++.+......+..|..|+|+||+|+..|..+++++||.     +|.++..+|. .|.||||-|...|+. +
T Consensus        27 Ks~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlq-----hGidv~vqD~ESG~taLHRaiyyG~i-d  100 (1267)
T KOG0783|consen   27 KSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQ-----HGIDVFVQDEESGYTALHRAIYYGNI-D  100 (1267)
T ss_pred             cCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHh-----cCceeeeccccccchHhhHhhhhchH-H
Confidence            34555677788877666688999999999999999999999999999     6677888875 599999999999997 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAAR  110 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~  110 (466)
                      ++-.||++ |..+..+|++|.+||..-++
T Consensus       101 ca~lLL~~-g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  101 CASLLLSK-GRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             HHHHHHhc-CCceEEecccCCCHHHHHhh
Confidence            99999988 67799999999999998887

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.66  E-value=1.3e-08  Score=104.39  Aligned_cols=81  Identities=23%  Similarity=0.289  Sum_probs=64.4

Q ss_pred             hhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC-CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccc
Q 037168           57 DKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNN-NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPF  135 (466)
Q Consensus        57 ~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~  135 (466)
                      ...|..|..|+|+||+|+..|.. +++++|+++ |.+++.+|. .|+||||-|..+|+.|++..|+.+       |....
T Consensus        43 n~anikD~~GR~alH~~~S~~k~-~~l~wLlqh-Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~-------g~SL~  113 (1267)
T KOG0783|consen   43 NLANIKDRYGRTALHIAVSENKN-SFLRWLLQH-GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSK-------GRSLR  113 (1267)
T ss_pred             hhhhHHHhhccceeeeeeccchh-HHHHHHHhc-CceeeeccccccchHhhHhhhhchHHHHHHHHhc-------CCceE
Confidence            34677888888888888888775 888888888 777777774 588888888888888888888887       56777


Q ss_pred             cccCCCCChhh
Q 037168          136 LHRNDKTNVLH  146 (466)
Q Consensus       136 ~~d~~g~TpLh  146 (466)
                      ++|++|..||.
T Consensus       114 i~Dkeglsplq  124 (1267)
T KOG0783|consen  114 IKDKEGLSPLQ  124 (1267)
T ss_pred             EecccCCCHHH
Confidence            88888888887

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.64  E-value=8.5e-08  Score=93.31  Aligned_cols=105  Identities=25%  Similarity=0.260  Sum_probs=89.4

Q ss_pred             cccCCCCC------hhhHHHHHhhcCcHHHHHHHHHHCCCcccccc-cCCChHHHHHHHcCChhHHHHHHhcCccccccc
Q 037168          136 LHRNDKTN------VLHIAILSLHFGCIEIVKDILSVYPQAVEHID-DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLV  208 (466)
Q Consensus       136 ~~d~~g~T------pLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~  208 (466)
                      .+|.+|.|      -||   ..++.|+.|..-.||. .|++.|..+ .+|.||||+|++.|+..-+++|.-+|+|    +
T Consensus       122 ~rDdD~~~~~~LsrQLh---asvRt~nlet~LRll~-lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD----~  193 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLH---SSVRTGNLETCLRLLS-LGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD----P  193 (669)
T ss_pred             CCCcchhhHHHHHHHHH---HHhhcccHHHHHHHHH-cccccCCCCcccCCchhHHHHhccchhhhhHHhhccCC----C
Confidence            45556655      378   7778999999998998 899999887 5799999999999999999999999999    9


Q ss_pred             ccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHH
Q 037168          209 RKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWY  248 (466)
Q Consensus       209 ~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~  248 (466)
                      +..|.+|.||+.+|-..|+.++.+.|.+....+-.++.+|
T Consensus       194 ~a~d~~GmtP~~~AR~~gH~~laeRl~e~~y~vtDR~~f~  233 (669)
T KOG0818|consen  194 GAQDSSGMTPVDYARQGGHHELAERLVEIQYELTDRLAFY  233 (669)
T ss_pred             CCCCCCCCcHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999988866666555555554

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.63  E-value=3.7e-08  Score=95.36  Aligned_cols=95  Identities=21%  Similarity=0.232  Sum_probs=83.5

Q ss_pred             CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168           96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID  175 (466)
Q Consensus        96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d  175 (466)
                      .++.++..++.+|++.|+...++.+.-.       +.+.+.+|.+.+|+||   .|+..|+++++++|++.++.+.+.+|
T Consensus       501 ~~~~~~~i~~~~aa~~GD~~alrRf~l~-------g~D~~~~DyD~RTaLH---vAAaEG~v~v~kfl~~~~kv~~~~kD  570 (622)
T KOG0506|consen  501 PRENDTVINVMYAAKNGDLSALRRFALQ-------GMDLETKDYDDRTALH---VAAAEGHVEVVKFLLNACKVDPDPKD  570 (622)
T ss_pred             cccccchhhhhhhhhcCCHHHHHHHHHh-------cccccccccccchhhe---eecccCceeHHHHHHHHHcCCCChhh
Confidence            3445677899999999999998877766       6788889999999999   78889999999999999999999999


Q ss_pred             cCCChHHHHHHHcCChhHHHHHHhc
Q 037168          176 DEGRNILHVAIKYRQLEIFERVVQM  200 (466)
Q Consensus       176 ~~G~t~Lh~A~~~~~~~iv~~Ll~~  200 (466)
                      ..|+|||.-|...+|.+++++|-+.
T Consensus       571 Rw~rtPlDdA~~F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  571 RWGRTPLDDAKHFKHKEVVKLLEEA  595 (622)
T ss_pred             ccCCCcchHhHhcCcHHHHHHHHHH
Confidence            9999999999999999999998764

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1.7e-07  Score=92.46  Aligned_cols=119  Identities=17%  Similarity=0.135  Sum_probs=97.2

Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCC-CcccCcCCCCChHHHHHHH
Q 037168           32 LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP-GLLGMRNNNGETALLRAAR  110 (466)
Q Consensus        32 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~-~~~~~~d~~G~tpLh~Aa~  110 (466)
                      +..|+..++.--++..-.     +|.++-.++.+..|.||+|+..|+- ++|+++|++.| +.++..|..|.|+||-|+.
T Consensus       870 il~av~~~D~~klqE~h~-----~gg~ll~~~~~~~sllh~a~~tg~~-eivkyildh~p~elld~~de~get~lhkaa~  943 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHL-----NGGSLLIQGPDHCSLLHYAAKTGNG-EIVKYILDHGPSELLDMADETGETALHKAAC  943 (1004)
T ss_pred             HHHHHHhccHHHHHHHHh-----cCCceEeeCcchhhHHHHHHhcCCh-HHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence            445555555443444433     3556778899999999999999996 99999999976 4678889999999999999


Q ss_pred             cCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH
Q 037168          111 YGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV  166 (466)
Q Consensus       111 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~  166 (466)
                      .++..+.++|++.       |+.....|..|.||-.   .|.+.|+.|...+|-++
T Consensus       944 ~~~r~vc~~lvda-------gasl~ktd~kg~tp~e---raqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  944 QRNRAVCQLLVDA-------GASLRKTDSKGKTPQE---RAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             hcchHHHHHHHhc-------chhheecccCCCChHH---HHHhcCCchHHHHHhhh
Confidence            9999999999998       6677788899999999   88888999998888653

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.52  E-value=2.8e-07  Score=89.76  Aligned_cols=96  Identities=21%  Similarity=0.144  Sum_probs=79.3

Q ss_pred             ccccCCCCCcH------HHHHHHcCCHHHHHHHHHhCCCCchhhhhccC-CCCChHHHHHHHcCCcHHHHHHHHHhCCCc
Q 037168           21 LYVFTIHDDTV------LHMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTILHETATSNHALPVADKVLRKAPGL   93 (466)
Q Consensus        21 ~~~~~~~g~T~------Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~   93 (466)
                      +..+|.+|.|.      ||-.++.|+.+..-.||..     |++.|..+ ..|.||||+|++.|+. .-+++|+-. |++
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~l-----GA~~N~~hpekg~TpLHvAAk~Gq~-~Q~ElL~vY-GAD  192 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSL-----GAQANFFHPEKGNTPLHVAAKAGQI-LQAELLAVY-GAD  192 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHc-----ccccCCCCcccCCchhHHHHhccch-hhhhHHhhc-cCC
Confidence            34456666554      9999999999999999994     45566655 4699999999999997 666666655 899


Q ss_pred             ccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168           94 LGMRNNNGETALLRAARYGKVDIFNFLAGK  123 (466)
Q Consensus        94 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~  123 (466)
                      ++.+|.+|.||+.+|-..||.++.+-|++.
T Consensus       193 ~~a~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  193 PGAQDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             CCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            999999999999999999999988887763

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.52  E-value=2.1e-07  Score=91.87  Aligned_cols=89  Identities=25%  Similarity=0.240  Sum_probs=75.5

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      -|||.++...+.+-.+..+...   ....++.+|..|+||||+|+..|+. +.++.|+.. ++++..+|++|++|||.|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~---~~~~id~~D~~g~TpLhlAV~Lg~~-~~a~~Ll~a-~Adv~~kN~~gWs~L~EAv   96 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAK---VSLVIDRRDPPGRTPLHLAVRLGHV-EAARILLSA-GADVSIKNNEGWSPLHEAV   96 (560)
T ss_pred             cccchhhhccchhhHHHHHhhh---hhceeccccCCCCccHHHHHHhcCH-HHHHHHHhc-CCCccccccccccHHHHHH
Confidence            4599999888877666655432   2356888999999999999999997 899999988 6779999999999999999


Q ss_pred             HcCCHHHHHHHHhc
Q 037168          110 RYGKVDIFNFLAGK  123 (466)
Q Consensus       110 ~~g~~~~v~~Ll~~  123 (466)
                      ..|+.+++..++.+
T Consensus        97 ~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   97 STGNEQIITEVLRH  110 (560)
T ss_pred             HcCCHHHHHHHHHH
Confidence            99999999888876

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.51  E-value=1.5e-05  Score=83.49  Aligned_cols=89  Identities=19%  Similarity=0.180  Sum_probs=72.9

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL  106 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh  106 (466)
                      .++--...|+..|+...|+..++.... ..-++|++|.-|.++||.|..+.+. ++.++|+++. ...       ..+|.
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~-~~lninc~d~lGr~al~iai~nenl-e~~eLLl~~~-~~~-------gdALL   93 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAV-SKLNINCRDPLGRLALHIAIDNENL-ELQELLLDTS-SEE-------GDALL   93 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccc-cccchhccChHhhhceecccccccH-HHHHHHhcCc-ccc-------chHHH
Confidence            345567789999999999999997665 4567899999999999999998886 9999999883 222       45788


Q ss_pred             HHHHcCCHHHHHHHHhccC
Q 037168          107 RAARYGKVDIFNFLAGKIS  125 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~~  125 (466)
                      +|++.|..++|+.++.+..
T Consensus        94 ~aI~~~~v~~VE~ll~~~~  112 (822)
T KOG3609|consen   94 LAIAVGSVPLVELLLVHFV  112 (822)
T ss_pred             HHHHHHHHHHHHHHHhccc
Confidence            8999999999999998743

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.51  E-value=1.2e-07  Score=59.18  Aligned_cols=33  Identities=18%  Similarity=0.272  Sum_probs=27.6

Q ss_pred             CCChHHHHHHHcCChhHHHHHHhcCcccccccccccC
Q 037168          177 EGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDY  213 (466)
Q Consensus       177 ~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~  213 (466)
                      +|+||||+|+.+|+.+++++|+++|++    ++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~----~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGAD----INARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSC----TTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCC----CCCCCC
Confidence            488999999999999999999998888    776663

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.50  E-value=1.1e-07  Score=57.59  Aligned_cols=27  Identities=22%  Similarity=0.361  Sum_probs=24.2

Q ss_pred             CCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          177 EGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       177 ~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      +|+||||+|+.+|+.+++++|+++|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            588999999999999999999999887

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.48  E-value=2.6e-07  Score=91.11  Aligned_cols=92  Identities=21%  Similarity=0.255  Sum_probs=80.2

Q ss_pred             hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168           68 TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI  147 (466)
Q Consensus        68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~  147 (466)
                      -|||.++...+..++.+.+.......++.+|..|+||||+|+..|+.+.++.|+..       ++++..+|++|++||| 
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a-------~Adv~~kN~~gWs~L~-   93 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA-------GADVSIKNNEGWSPLH-   93 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhc-------CCCccccccccccHHH-
Confidence            46999999888767777777665667899999999999999999999999999998       7788999999999999 


Q ss_pred             HHHHhhcCcHHHHHHHHHHCCC
Q 037168          148 AILSLHFGCIEIVKDILSVYPQ  169 (466)
Q Consensus       148 A~~a~~~g~~~~v~~Ll~~~~~  169 (466)
                        .|+..|+.+++..++.++..
T Consensus        94 --EAv~~g~~q~i~~vlr~~~~  113 (560)
T KOG0522|consen   94 --EAVSTGNEQIITEVLRHLKY  113 (560)
T ss_pred             --HHHHcCCHHHHHHHHHHhHH
Confidence              77889999999988875443

>PF13606 Ank_3: Ankyrin repeat

Probab=98.38  E-value=3.4e-07  Score=55.50  Aligned_cols=25  Identities=28%  Similarity=0.373  Sum_probs=17.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhC
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDEL   51 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~   51 (466)
                      +|+||||+||+.|+.|+|++||+.+
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g   25 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHG   25 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence            4677777777777777777777743

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.35  E-value=5.6e-07  Score=56.04  Aligned_cols=23  Identities=35%  Similarity=0.427  Sum_probs=15.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLD   49 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~   49 (466)
                      +|.||||+|+..|+.++++.|++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~   23 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLK   23 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHHHHH
Confidence            46666666666666666666666

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.35  E-value=1.1e-06  Score=87.19  Aligned_cols=93  Identities=22%  Similarity=0.145  Sum_probs=78.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      .-|.-|+...+...+-.||.++... ..+-...+.+|.|+||+||+.|+. .+.++|+-. +.++..+|..|+|+|.||-
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~-e~~~t~~~~~grt~LHLa~~~gnV-vl~QLLiWy-g~dv~~rda~g~t~l~yar  702 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSRE-EVNETCGEGDGRTALHLAARKGNV-VLAQLLIWY-GVDVMARDAHGRTALFYAR  702 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCch-hhhccccCCCCcchhhhhhhhcch-hHHHHHHHh-CccceecccCCchhhhhHh
Confidence            3477888889999999999977542 233445677889999999999997 888877755 8999999999999999999


Q ss_pred             HcCCHHHHHHHHhccC
Q 037168          110 RYGKVDIFNFLAGKIS  125 (466)
Q Consensus       110 ~~g~~~~v~~Ll~~~~  125 (466)
                      +.|..|++..|++++-
T Consensus       703 ~a~sqec~d~llq~gc  718 (749)
T KOG0705|consen  703 QAGSQECIDVLLQYGC  718 (749)
T ss_pred             hcccHHHHHHHHHcCC
Confidence            9999999999999854

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.33  E-value=6.5e-07  Score=95.21  Aligned_cols=144  Identities=16%  Similarity=0.084  Sum_probs=107.6

Q ss_pred             HHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCC
Q 037168           12 LCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP   91 (466)
Q Consensus        12 ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~   91 (466)
                      .+..............|.|.+|+++..+..-+++.+++.    .+......|.+|.-.+|+++. ++. +.+-+++..++
T Consensus       558 ~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~----~~~~~~eld~d~qgV~hfca~-lg~-ewA~ll~~~~~  631 (975)
T KOG0520|consen  558 LLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEW----AGSGDLELDRDGQGVIHFCAA-LGY-EWAFLPISADG  631 (975)
T ss_pred             HHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcc----cccCchhhcccCCChhhHhhh-cCC-ceeEEEEeecc
Confidence            333444445666778899999999999999999999984    133445667888888888665 555 78878888889


Q ss_pred             CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168           92 GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus        92 ~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      ..++.+|..|+||||+|+..|+..++..|++.++.... -.++......|.|+-.   .+...|+..+..+|-+
T Consensus       632 ~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~-~tdps~~~p~g~ta~~---la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  632 VAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGA-VTDPSPETPGGKTAAD---LARANGHKGIAGYLSE  701 (975)
T ss_pred             cccccccCCCCcccchHhhcCHHHHHHHHHHhcccccc-ccCCCCCCCCCCchhh---hhhcccccchHHHHhh
Confidence            99999999999999999999999999999976442211 1233334456888887   6667777777666654

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.21  E-value=9.5e-06  Score=84.84  Aligned_cols=112  Identities=16%  Similarity=0.083  Sum_probs=89.6

Q ss_pred             ccchHHHHHHHHhCCC--ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH
Q 037168            3 KQDEQKVIELCRKVPD--HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL   80 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~--~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~   80 (466)
                      +||.-.|.+.+.+...  .+.|..|.-|+++||+|+.+.|.|+++.|+++.     .      .. ..+|-+|+..|.. 
T Consensus        35 ~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~-----~------~~-gdALL~aI~~~~v-  101 (822)
T KOG3609|consen   35 NGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTS-----S------EE-GDALLLAIAVGSV-  101 (822)
T ss_pred             cCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCc-----c------cc-chHHHHHHHHHHH-
Confidence            5888889999988754  678899999999999999999999999999942     1      11 4578888998986 


Q ss_pred             HHHHHHHHhCCCc---------ccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCC
Q 037168           81 PVADKVLRKAPGL---------LGMRNNNGETALLRAARYGKVDIFNFLAGKISGY  127 (466)
Q Consensus        81 ~~v~~Ll~~~~~~---------~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~  127 (466)
                      +.|+.++.+....         ....-..+.|||.+||..++.||++.|++++...
T Consensus       102 ~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i  157 (822)
T KOG3609|consen  102 PLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI  157 (822)
T ss_pred             HHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence            9999999873211         1122345789999999999999999999987644

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.14  E-value=7.2e-06  Score=81.66  Aligned_cols=92  Identities=23%  Similarity=0.219  Sum_probs=76.4

Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV  184 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~  184 (466)
                      |--|....+...+-+|+.++...+   .+-...+.+|+|+||   .|+..|++.+.++|+- ++.|+-.+|.+|+|+|.+
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e---~~~t~~~~~grt~LH---La~~~gnVvl~QLLiW-yg~dv~~rda~g~t~l~y  700 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREE---VNETCGEGDGRTALH---LAARKGNVVLAQLLIW-YGVDVMARDAHGRTALFY  700 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchh---hhccccCCCCcchhh---hhhhhcchhHHHHHHH-hCccceecccCCchhhhh
Confidence            445666677778888888765332   233345678999999   8889999999999985 999999999999999999


Q ss_pred             HHHcCChhHHHHHHhcCcc
Q 037168          185 AIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       185 A~~~~~~~iv~~Ll~~g~~  203 (466)
                      |-+.|..++++.|+++|..
T Consensus       701 ar~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  701 ARQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             HhhcccHHHHHHHHHcCCC
Confidence            9999999999999999975

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.11  E-value=1.7e-06  Score=92.64  Aligned_cols=85  Identities=19%  Similarity=0.175  Sum_probs=77.2

Q ss_pred             CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168          139 NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI  218 (466)
Q Consensus       139 ~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp  218 (466)
                      ..|.|+||   .|+..|..-+.+.|++ +++++|.+|..|+||||.+...|+...+..++++|++    .++.|.+|.+|
T Consensus       654 ~~~~s~lh---~a~~~~~~~~~e~ll~-~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~----~~a~~~~~~~~  725 (785)
T KOG0521|consen  654 CIGCSLLH---VAVGTGDSGAVELLLQ-NGADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD----PNAFDPDGKLP  725 (785)
T ss_pred             hcccchhh---hhhccchHHHHHHHHh-cCCcchhhhccCCCcchhhhhhcccchhhhhcccccc----ccccCccCcch
Confidence            46899999   7788899999999998 8999999999999999999999999999999999998    89999999999


Q ss_pred             hhhhhccCcchhh
Q 037168          219 FHMAGIKRKDYVA  231 (466)
Q Consensus       219 LHlAa~~~~~~~~  231 (466)
                      |++|....+.++.
T Consensus       726 l~~a~~~~~~d~~  738 (785)
T KOG0521|consen  726 LDIAMEAANADIV  738 (785)
T ss_pred             hhHHhhhccccHH
Confidence            9999876555444

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.04  E-value=3.2e-06  Score=90.08  Aligned_cols=137  Identities=15%  Similarity=0.016  Sum_probs=109.4

Q ss_pred             cccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccc
Q 037168           93 LLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVE  172 (466)
Q Consensus        93 ~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~  172 (466)
                      .....+-.|+|-+|+++..++.-.++.+++- .     +......|.+|.-.+|   . |..++.+..-+++...+..++
T Consensus       566 ~~~~~~~r~~lllhL~a~~lyawLie~~~e~-~-----~~~~~eld~d~qgV~h---f-ca~lg~ewA~ll~~~~~~ai~  635 (975)
T KOG0520|consen  566 LSSSVNFRDMLLLHLLAELLYAWLIEKVIEW-A-----GSGDLELDRDGQGVIH---F-CAALGYEWAFLPISADGVAID  635 (975)
T ss_pred             ccccCCCcchHHHHHHHHHhHHHHHHHHhcc-c-----ccCchhhcccCCChhh---H-hhhcCCceeEEEEeecccccc
Confidence            4555677899999999999999999988874 1     2344556777888888   4 345788888888888899999


Q ss_pred             ccccCCChHHHHHHHcCChhHHHHHHhcCcccccc--cccccCCCCCchhhhhccCcchhhhccCChhh
Q 037168          173 HIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRL--VRKIDYNGNTIFHMAGIKRKDYVAEKMEGPAL  239 (466)
Q Consensus       173 ~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~--~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~  239 (466)
                      .+|.+|+||||+|+.+|+.+++..|++.|++...+  .+..+-.|.|+-.+|..+|+..+...|.+.++
T Consensus       636 i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L  704 (975)
T KOG0520|consen  636 IRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKAL  704 (975)
T ss_pred             cccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHH
Confidence            99999999999999999999999999888764433  33445569999999999999888777755544

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.94  E-value=1.1e-05  Score=86.62  Aligned_cols=84  Identities=18%  Similarity=0.133  Sum_probs=54.1

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168          100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR  179 (466)
Q Consensus       100 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~  179 (466)
                      .|.|+||.|+..|..-++++|++.       +++++..|..|+||+|   .+...|+...+..+++ .+++.+..|.+|.
T Consensus       655 ~~~s~lh~a~~~~~~~~~e~ll~~-------ga~vn~~d~~g~~plh---~~~~~g~~~~~~~ll~-~~a~~~a~~~~~~  723 (785)
T KOG0521|consen  655 IGCSLLHVAVGTGDSGAVELLLQN-------GADVNALDSKGRTPLH---HATASGHTSIACLLLK-RGADPNAFDPDGK  723 (785)
T ss_pred             cccchhhhhhccchHHHHHHHHhc-------CCcchhhhccCCCcch---hhhhhcccchhhhhcc-ccccccccCccCc
Confidence            456666666666666666666666       4556666666666666   5556666666666666 6666666666666


Q ss_pred             hHHHHHHHcCChhHH
Q 037168          180 NILHVAIKYRQLEIF  194 (466)
Q Consensus       180 t~Lh~A~~~~~~~iv  194 (466)
                      ++|++|....+.+++
T Consensus       724 ~~l~~a~~~~~~d~~  738 (785)
T KOG0521|consen  724 LPLDIAMEAANADIV  738 (785)
T ss_pred             chhhHHhhhccccHH
Confidence            666666655444443

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.67  E-value=0.00013  Score=63.25  Aligned_cols=65  Identities=15%  Similarity=0.173  Sum_probs=49.2

Q ss_pred             hhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168           58 KMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK  123 (466)
Q Consensus        58 ~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~  123 (466)
                      ++|.+|..|+|||+.|+..|+. +.+.+|+.++.+.+...|..|.+++.+|-+.|+.+.+..|.+.
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~-eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSN-EAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CccchhhhcchHHHHHhhhcch-hHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            5677777777777777777776 7777777775577777777777777777777777777777665

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.66  E-value=0.00011  Score=63.70  Aligned_cols=70  Identities=9%  Similarity=0.009  Sum_probs=61.6

Q ss_pred             CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCC
Q 037168           18 DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPG   92 (466)
Q Consensus        18 ~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~   92 (466)
                      +.+++..|..|+|+|+.|+..|+.+.+.+|+.++.    +.+...|..|.+++.+|-+.|.. ++++.|.+...+
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~----a~vgv~d~ssldaaqlaek~g~~-~fvh~lfe~~~e   71 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGV----AFVGVTDESSLDAAQLAEKGGAQ-AFVHSLFENDRE   71 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCc----ccccccccccchHHHHHHhcChH-HHHHHHHHHhcc
Confidence            35789999999999999999999999999999532    66888999999999999999996 999999887443

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.60  E-value=0.0001  Score=70.15  Aligned_cols=68  Identities=15%  Similarity=0.126  Sum_probs=45.7

Q ss_pred             HHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168           31 VLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL  105 (466)
Q Consensus        31 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL  105 (466)
                      -|..||+.|+.+.|+.|++     .|.++|.+|...++||.+|+..||. ++||.|++. |+.-..-.-+|.-++
T Consensus        39 elceacR~GD~d~v~~LVe-----tgvnVN~vD~fD~spL~lAsLcGHe-~vvklLLen-GAiC~rdtf~G~RC~  106 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVE-----TGVNVNAVDRFDSSPLYLASLCGHE-DVVKLLLEN-GAICSRDTFDGDRCH  106 (516)
T ss_pred             HHHHHhhcccHHHHHHHHH-----hCCCcchhhcccccHHHHHHHcCcH-HHHHHHHHc-CCcccccccCcchhh
Confidence            4677777777777777777     4556777777777777777777774 777777776 553333334555553

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.50  E-value=0.0002  Score=68.17  Aligned_cols=57  Identities=12%  Similarity=0.075  Sum_probs=51.3

Q ss_pred             ChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccC
Q 037168           67 NTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS  125 (466)
Q Consensus        67 ~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~  125 (466)
                      .--|..||+.|+. +.++.|++. |.++|.+|....+||.+|+..||.+++++|+++++
T Consensus        37 f~elceacR~GD~-d~v~~LVet-gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA   93 (516)
T KOG0511|consen   37 FGELCEACRAGDV-DRVRYLVET-GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA   93 (516)
T ss_pred             hHHHHHHhhcccH-HHHHHHHHh-CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence            4468899999997 999999996 88899999999999999999999999999999855

>smart00248 ANK ankyrin repeats

Probab=96.04  E-value=0.0089  Score=34.39  Aligned_cols=27  Identities=26%  Similarity=0.438  Sum_probs=21.4

Q ss_pred             CCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          177 EGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       177 ~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      +|.||+|+|+..++.++++.|++.+.+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            367888888888888888888877754

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=95.90  E-value=0.013  Score=33.64  Aligned_cols=25  Identities=32%  Similarity=0.339  Sum_probs=18.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhC
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDEL   51 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~   51 (466)
                      +|.||+|+|+..|+.++++.|++.+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~   25 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKG   25 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            3677777777777777777777743

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.70  E-value=0.11  Score=51.91  Aligned_cols=62  Identities=11%  Similarity=0.048  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHCCCccc------ccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhh
Q 037168          157 IEIVKDILSVYPQAVE------HIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAG  223 (466)
Q Consensus       157 ~~~v~~Ll~~~~~~~~------~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa  223 (466)
                      .+.++.|.+ +..+.|      ..|.---|+||+|+..|..+++.++++.|+|    +..+|..|.||..+++
T Consensus       404 p~~ie~lke-n~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D----p~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKE-NLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD----PSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHh-cCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC----chhcccCCCCcccccc
Confidence            445555555 444433      2234467999999999999999999999998    9999999999999998

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.08  E-value=0.026  Score=56.17  Aligned_cols=67  Identities=16%  Similarity=0.108  Sum_probs=49.2

Q ss_pred             HHHHHHHHHhCCCCc-hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           41 SDLVIKLLDELPDQS-LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        41 ~~~v~~Ll~~~~~~~-~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      .+.+++|.+...+.+ .......+.--.|+||+|+..|.- +++.++|+. +++...+|..|.||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~-k~v~~~Lee-g~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGAR-KCVKYFLEE-GCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchH-HHHHHHHHh-cCCchhcccCCCCcccccc
Confidence            566777776443311 011122344467999999999996 999999999 5999999999999999877

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=90.76  E-value=1.2  Score=40.21  Aligned_cols=93  Identities=16%  Similarity=0.183  Sum_probs=67.8

Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc----CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccc---c
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR----NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEH---I  174 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d----~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~---~  174 (466)
                      .+++-+|..++..+++.+|+....        ...+|    ..+..-+.|+ ......+..+++..+++.=.++|.   +
T Consensus       180 ~~Am~~si~~~K~dva~~lls~f~--------ft~~dv~~~~~~~ydieY~-LS~h~a~~kvL~~Fi~~Glv~vN~~F~~  250 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSKFN--------FTKQDVASMEKELYDIEYL-LSEHSASYKVLEYFINRGLVDVNKKFQK  250 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhhcc--------eecchhhhcCcchhhHHHH-HhhcCCcHHHHHHHHhccccccchhhhc
Confidence            578889999999999999998632        11111    1233334444 345667788899999855455554   3


Q ss_pred             ccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          175 DDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       175 d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      -+.|.|-|.-|+++++.+++..|+++|+-
T Consensus       251 ~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  251 VNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             cCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            46899999999999999999999999973

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=90.50  E-value=2.8  Score=36.80  Aligned_cols=138  Identities=15%  Similarity=0.206  Sum_probs=87.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      -.|..|+..+...+++..-+....        .-...++-.-.||+..+. ++|+++-+.    +...  +-.+-+-.|.
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~--------~~~~~q~LFElAC~~qky-diV~WI~qn----L~i~--~~~~iFdIA~  112 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLEN--------ERYLNQELFELACEEQKY-DIVKWIGQN----LHIY--NPEDIFDIAF  112 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhc--------chhHHHHHHHHHHHHccc-cHHHHHhhc----cCCC--Cchhhhhhhh
Confidence            456778888888888877763211        113466778889998887 898888332    2222  2345567788


Q ss_pred             HcCCHHHHH----HHHhccCCCCCCCcccccccCC--CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHH
Q 037168          110 RYGKVDIFN----FLAGKISGYDHATRLPFLHRND--KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILH  183 (466)
Q Consensus       110 ~~g~~~~v~----~Ll~~~~~~~~~~~~~~~~d~~--g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh  183 (466)
                      ...+.++..    ++.++...       ..-.|..  -..-|+   .|+..|-...+...++ +|.+++.      ++|.
T Consensus       113 ~~kDlsLyslGY~l~~~~~~~-------~~~~d~~~ll~~hl~---~a~~kgll~F~letlk-ygg~~~~------~vls  175 (192)
T PF03158_consen  113 AKKDLSLYSLGYKLLFNRMMS-------EHNEDPTSLLTQHLE---KAAAKGLLPFVLETLK-YGGNVDI------IVLS  175 (192)
T ss_pred             hccchhHHHHHHHHHHhhccc-------ccccCHHHHHHHHHH---HHHHCCCHHHHHHHHH-cCCcccH------HHHH
Confidence            777776632    22222110       0000000  001234   6778899999999998 6655543      8999


Q ss_pred             HHHHcCChhHHHHHHh
Q 037168          184 VAIKYRQLEIFERVVQ  199 (466)
Q Consensus       184 ~A~~~~~~~iv~~Ll~  199 (466)
                      .|+++++.+++.+++.
T Consensus       176 ~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  176 QAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHhhHHHHHHHhhc
Confidence            9999999999998874

These proteins may be involved in promoting survival of infected macrophages [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=87.08  E-value=2  Score=32.10  Aligned_cols=49  Identities=18%  Similarity=0.196  Sum_probs=38.0

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhC
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKA   90 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~   90 (466)
                      ...+..|+..|+.|+++.+++..            ......+..|+...+. +++++|+++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~------------~~~~~~l~~AI~~H~n-~i~~~l~~~y   55 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN------------KPDNDCLEYAIKSHNN-EIADWLIENY   55 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh------------ccHHHHHHHHHHHhhH-HHHHHHHHhc
Confidence            45678999999999999999732            1114578899988886 9999999874

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=84.62  E-value=4.6  Score=36.63  Aligned_cols=95  Identities=15%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHc-CCcHHHHHHHHHhCCCcccC---cCCCCChH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATS-NHALPVADKVLRKAPGLLGM---RNNNGETA  104 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~-g~~~~~v~~Ll~~~~~~~~~---~d~~G~tp  104 (466)
                      .+++-+|..++..+++-+|+....-..+..+...  .+..-+.++... |....+.++.++++-.++|.   +-+.|.|-
T Consensus       180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~--~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM  257 (284)
T PF06128_consen  180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASME--KELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM  257 (284)
T ss_pred             HHHHHHHhcccHHHHHHHHHhhcceecchhhhcC--cchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence            4778888888888999999985432222222222  133344444432 33346788888875555553   45789999


Q ss_pred             HHHHHHcCCHHHHHHHHhccC
Q 037168          105 LLRAARYGKVDIFNFLAGKIS  125 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~  125 (466)
                      |.-|..+++.+++.+|+++++
T Consensus       258 LDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  258 LDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             HHhHHhcCcHHHHHHHHHcCc
Confidence            999999999999999999854

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]

Probab=80.18  E-value=0.85  Score=40.24  Aligned_cols=53  Identities=25%  Similarity=0.366  Sum_probs=44.2

Q ss_pred             ccccCCChHHHHHHHcCChhHHH-HHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          173 HIDDEGRNILHVAIKYRQLEIFE-RVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       173 ~~d~~G~t~Lh~A~~~~~~~iv~-~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      ..|.+-.+|||-|++-++.+++- ++++..+.....+|..|.+|..+|.+|-..
T Consensus       217 lId~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  217 LIDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             HHcCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            34677889999999999988765 577777777778999999999999999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	466
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-11
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-07
2rfa_A	232	Transient receptor potential cation channel subfa	7e-11
2rfa_A	232	Transient receptor potential cation channel subfa	4e-10
2rfa_A	232	Transient receptor potential cation channel subfa	8e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-11
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-06
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-10
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-09
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-09
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-08
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-05
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	9e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-09
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-07
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-06
2pnn_A	273	Transient receptor potential cation channel subfa	6e-09
2pnn_A	273	Transient receptor potential cation channel subfa	9e-09
2pnn_A	273	Transient receptor potential cation channel subfa	2e-07
2pnn_A	273	Transient receptor potential cation channel subfa	8e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-08
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-08
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-08
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-05
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-04
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-08
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-07
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-05
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-07
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-08
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-08
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	9e-08
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-07
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-05
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	7e-04
2etb_A	256	Transient receptor potential cation channel subfam	2e-07
2etb_A	256	Transient receptor potential cation channel subfam	3e-07
2etb_A	256	Transient receptor potential cation channel subfam	9e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-05
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-05
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-07
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-06
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-04
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-07
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-07
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-05
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-05
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-05
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-06
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	6e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-06
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-05
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	7e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-05
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-04
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-06
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-05
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-06
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-04
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-04
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-05
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-05
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-05
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-05
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-05
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-04
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-05
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	9e-05
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-04
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-04
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-04
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-04
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-04

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 64.1 bits (157), Expect = 3e-11
 Identities = 32/204 (15%), Positives = 60/204 (29%), Gaps = 26/204 (12%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T L  A   +  + +  ++D +P +S  ++   NK GN+ LH     N    VA + +  
Sbjct: 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW-EDVAMRFVEM 233

Query: 90  APGLLG----MRNNNGETALLRAARYGKVDIFNFL------AGKISGYDHATRLPFLHRN 139
                G    M +N     L  + R   V +   L          +   H        R 
Sbjct: 234 -----GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRV 288

Query: 140 DKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVV 198
              + +  A         E+++ +        V    + G        K     +    +
Sbjct: 289 VWLDFVPAAA---DPSKQEVLQLLQEK--LDEVVRSLNTGAGGAVKRKKKAAPAVKRMKL 343

Query: 199 QMEIPLRRLVRKIDYNGNTIFHMA 222
               P    VR    +      ++
Sbjct: 344 APSAP----VRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 41/177 (23%)

Query: 62  QNKAGNTILHETATSNHALPVADKVL--RKAPGLLGMRNNNGETALLRAARYGKVDIFNF 119
            +      +H  A          + L          ++N  G TAL  A ++G VD   +
Sbjct: 16  SDDENMEKIHVAARKGQ-TDEV-RRLIETGVS--PTIQNRFGCTALHLACKFGCVDTAKY 71

Query: 120 LAGKIS-GYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG 178
           L    S G  H+        + +   +H+A+        ++V   L      VE   + G
Sbjct: 72  L---ASVGEVHSL------WHGQK-PIHLAV---MANKTDLVV-AL------VEGAKERG 111

Query: 179 RNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA---GIKRKDYVAE 232
           +    +  +  + E+ E    ++             G T  H     G +  + + +
Sbjct: 112 QMPESLLNECDEREVNEIGSHVK----------HCKGQTALHWCVGLGPEYLE-MIK 157

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 52.9 bits (128), Expect = 8e-08
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 49/207 (23%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
           H    +H+A    K+DLV+ L++              + G          +    V +  
Sbjct: 83  HGQKPIHLAVMANKTDLVVALVEG-----------AKERGQMPESLLNECDE-REVNEI- 129

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGK--VDIFNFLAGKIS-GYDHATRLPFLHRNDKTN 143
                    +++  G+TAL      G   +++   L   +  G              K  
Sbjct: 130 ------GSHVKHCKGQTALHWCVGLGPEYLEMIKIL---VQLGAS---------PTAKDK 171

Query: 144 ----VLHIAILSLHFGCIEIVKDILSVYPQA----VEHIDDEGRNILHVAIKYRQLEIFE 195
                L  A+    F   E +  ++   P      +++ + +G + LH AI     ++  
Sbjct: 172 ADETPLMRAM---EFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAM 228

Query: 196 RVVQMEIPLRRLVRKIDYNGNTIFHMA 222
           R V+M I     V   D       +++
Sbjct: 229 RFVEMGID----VNMEDNEHTVPLYLS 251

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 49.9 bits (120), Expect = 9e-07
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 35/177 (19%)

Query: 28  DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHA-LPVADKV 86
                 +     + ++                  ++  G T LH         L +   +
Sbjct: 111 GQMPESLLNECDEREVNEIGSHV-----------KHCKGQTALHWCVGLGPEYLEMIKIL 159

Query: 87  LRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT 142
           ++      G     ++   ET L+RA  +   +  + +   +              +   
Sbjct: 160 VQL-----GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL------RLDYAN 208

Query: 143 N----VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
                 LH AI        ++    + +    V   D+E    L+++++   + + +
Sbjct: 209 KQGNSHLHWAI---LINWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTK 261

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 61.1 bits (149), Expect = 7e-11
 Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 45/230 (19%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           ++ L +A        + KLL     +  + + ++   G T LH  A  ++ L  A  ++ 
Sbjct: 4   ESPLLLAAKENDVQALSKLLK---FEGCE-VHQRGAMGETALHIAALYDN-LEAAMVLME 58

Query: 89  KAPGLLGM----RNNNGETALLRAARYGKVDIFNFLAGKIS----------GYDHATRLP 134
            AP L+          G+TAL  A     V++   L   ++          G     R  
Sbjct: 59  AAPELVFEPMTSELYEGQTALHIAVINQNVNLVRAL---LARGASVSARATGSVFHYRPH 115

Query: 135 FLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEH------IDDEGRNILHVAIKY 188
            L    +   L  A      G  EIV+ ++        H       D  G  +LH+ I  
Sbjct: 116 NLIYYGEH-PLSFAA---CVGSEEIVRLLIE-------HGADIRAQDSLGNTVLHILILQ 164

Query: 189 RQLEIFERVVQM------EIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE 232
                  ++  +         L+ L    +  G T F +AG++    + +
Sbjct: 165 PNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQ 214

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 43/207 (20%), Positives = 64/207 (30%), Gaps = 62/207 (29%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLG-------MRNNNGETALLRAARYGKVDIFN 118
             + L   A  N       + L K   LL         R   GETAL  AA Y  ++   
Sbjct: 3   WESPLLLAAKENDV-----QALSK---LLKFEGCEVHQRGAMGETALHIAALYDNLEAAM 54

Query: 119 FLAGKISGYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIV------------KD 162
            L   +     A  L F     +       LHIA+       + +V            + 
Sbjct: 55  VL---ME---AAPELVFEPMTSELYEGQTALHIAV---INQNVNLVRALLARGASVSARA 105

Query: 163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRL-------VRKIDYNG 215
             SV+     ++   G + L  A      EI             L       +R  D  G
Sbjct: 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVR-----------LLIEHGADIRAQDSLG 154

Query: 216 NTIFHMAGIK-RKDYVAEKMEGPALLL 241
           NT+ H+  ++  K +  +      LLL
Sbjct: 155 NTVLHILILQPNKTFACQMYN---LLL 178

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 19/102 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNH---ALPVA 83
             L  A      + +++LL       ++    +  Q+  GNT+LH      +   A  + 
Sbjct: 123 HPLSFAACVGSEE-IVRLL-------IEHGADIRAQDSLGNTVLHILILQPNKTFACQMY 174

Query: 84  DKVLRK-----APGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           + +L          L  + NN G T    A   G + +F  L
Sbjct: 175 NLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 61.7 bits (151), Expect = 8e-11
 Identities = 47/209 (22%), Positives = 68/209 (32%), Gaps = 39/209 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
           T LH A    + D +++LL       L        + K G T     A +   + +    
Sbjct: 41  TPLHNAVQMSRED-IVELL-------LRHGADPVLRKKNGATPFLLAAIAGS-VKLLKLF 91

Query: 87  LRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFL--AG-KISGYDHATRLPFLHRN 139
           L K     G      +  G TA + AA YGKV    FL   G  ++            R 
Sbjct: 92  LSK-----GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRK 146

Query: 140 DKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ 199
                L  A      G +E++K +L      V   D+ GRN L  A+        E +  
Sbjct: 147 GGATALMDAA---EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH 203

Query: 200 MEIPLRRL------VRKIDYNGNTIFHMA 222
           +      L      V      G T   +A
Sbjct: 204 L------LLDHGADVNVRGERGKTPLILA 226

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 50.5 bits (122), Expect = 4e-07
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 64/225 (28%)

Query: 25  TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVAD 84
            + D+ +L  A   +  DLV +LL+       +   ++ + G T LH     +    + +
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLE----GGANVNFQEEEGGWTPLHNAVQMSR-EDIVE 56

Query: 85  KVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-- 138
            +LR      G    +R  NG T  L AA  G V +       +S               
Sbjct: 57  LLLRH-----GADPVLRKKNGATPFLLAAIAGSVKLLKLF---LS-----------KGAD 97

Query: 139 -NDKTN----VLHIAILSLHFGCIEIVK---------DILSVYPQAVEHIDDEGRNILHV 184
            N+           A     +G ++ +K         ++     +  E +   G   L  
Sbjct: 98  VNECDFYGFTAFMEAA---VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 154

Query: 185 AIKYRQLEIFERVVQMEIPLRRLVRKI-------DYNGNTIFHMA 222
           A +   +E+    +++      L+ ++       D  G      A
Sbjct: 155 AAEKGHVEV----LKI------LLDEMGADVNACDNMGRNALIHA 189

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 50.2 bits (121), Expect = 5e-07
 Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 32/181 (17%)

Query: 30  TVLHMATYTKKSDLVIKLLD-----ELPDQSLDKMTRQNKAGNTILHETATSNHALPVAD 84
           T    A    K   +  L        L  ++ +   R  K G T L + A   H + V  
Sbjct: 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH-VEVL- 164

Query: 85  KVLRKAPGL-LGMRNNNGETALLRAARYGKVD----IFNFLAGKIS-GYDHATRLPFLHR 138
           K+L    G  +   +N G  AL+ A           I + L   +  G D          
Sbjct: 165 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL---LDHGAD---------V 212

Query: 139 NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF 194
           N +       L +A+       + +V+ +L      +   D +G+  L +A++ +  +I 
Sbjct: 213 NVRGERGKTPLILAV---EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 269

Query: 195 E 195
           E
Sbjct: 270 E 270

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 40.1 bits (95), Expect = 8e-04
 Identities = 27/155 (17%), Positives = 45/155 (29%), Gaps = 49/155 (31%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKM----TRQNKAGNTILHETATSNHALPVADK 85
           T L  A      + V+K+L       LD+M       +  G   L     S+    V   
Sbjct: 150 TALMDAAEKGHVE-VLKIL-------LDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201

Query: 86  VLRKAPGLL---G----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR 138
                  LL   G    +R   G+T L+ A     + +   L   +              
Sbjct: 202 T-----HLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL---LE-----------QE 242

Query: 139 ----NDKTN----VLHIAILSLHFGCIEIVKDILS 165
               ND  +     L +A+        +I + +  
Sbjct: 243 HIEINDTDSDGKTALLLAV---ELKLKKIAELLCK 274

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 62.3 bits (152), Expect = 9e-11
 Identities = 26/183 (14%), Positives = 55/183 (30%), Gaps = 24/183 (13%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVA 83
           H+ TVLH       ++    L+     + +     +   +   NT L     +     + 
Sbjct: 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARR-RRLV 182

Query: 84  DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTN 143
              L KA     + N +  +AL +AA      +  ++   ++       +      +   
Sbjct: 183 -AYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYM---LNSTKLKGDI-----EELDR 233

Query: 144 ----VLHIAILSLHFGCIEIVK-------DILSVYPQAVEHIDDEGRNILHVAIKYRQLE 192
                L I   +     +   K        +        +    +GR  LH A +   + 
Sbjct: 234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP 293

Query: 193 IFE 195
           I +
Sbjct: 294 IVK 296

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 29/213 (13%), Positives = 59/213 (27%), Gaps = 42/213 (19%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
             LH         +   +  E  +          +   T+LH  A+++ A    D ++ +
Sbjct: 96  IKLHTEAAGSY-AITEPITRESVNII------DPRHNRTVLHWIASNSSAEKSEDLIVHE 148

Query: 90  APGLLGM------RNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKT 142
           A   +         + +  T L+ A    +  +  +L   +  G D              
Sbjct: 149 AKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL---MKAGAD---------PTIYN 196

Query: 143 N----VLHIAILSLHFGCIEIVKDILSVYPQA--VEHIDDEGRNILHVAIKYRQLEIFER 196
                 LH A          ++  +L+       +E +D  G   L +       +    
Sbjct: 197 KSERSALHQAA---ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS 253

Query: 197 V-------VQMEIPLRRLVRKIDYNGNTIFHMA 222
                    +++           Y G T  H A
Sbjct: 254 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA 286

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 33/181 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVAD----- 84
           + LH A   +    ++  +        D     ++ G T L   A +     VA      
Sbjct: 201 SALHQAAANRDFG-MMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLV 258

Query: 85  ----KVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS--GYDHATRLPFLHR 138
               KV              G TAL  AA+   + I  +L   +   G +         +
Sbjct: 259 EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL---VGEKGSN---------K 306

Query: 139 NDKTNV----LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF 194
           + +       + +A      G IE+V  ++      VE +D        +A       I 
Sbjct: 307 DKQDEDGKTPIMLAA---QEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIV 362

Query: 195 E 195
           +
Sbjct: 363 D 363

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 21/169 (12%), Positives = 41/169 (24%), Gaps = 28/169 (16%)

Query: 58  KMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIF 117
           K  +   +    L E +   +     +++            +       +    G   + 
Sbjct: 29  KNHQSITSSQHSLLEASYDGYIKRQRNEL-----------QHYSLYPNPQGYGNGNDFLG 77

Query: 118 NFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE 177
           +F    +               +    LH        G   I + I              
Sbjct: 78  DFNHTNLQIPTEPE-------PESPIKLHTEA----AGSYAITEPITRE--SVNIIDPRH 124

Query: 178 GRNILHVAIKYRQLEIFERVVQMEIPLRRL----VRKIDYNGNTIFHMA 222
            R +LH        E  E ++  E          V  +D + NT   +A
Sbjct: 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA 173

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 60.6 bits (148), Expect = 1e-10
 Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 44/180 (24%)

Query: 62  QNKAGNTILHETATSNHALPVAD--KVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNF 119
             + G++ LH            +  + ++     L  +NN  +T L  A    + +I   
Sbjct: 4   LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEA 63

Query: 120 LAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILS-----VYPQ 169
           L   +  G D            +       LH+A      GC+  V  +           
Sbjct: 64  L---LGAGCD---------PELRDFRGNTPLHLAC---EQGCLASVGVLTQSCTTPHLHS 108

Query: 170 AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVR-------KIDYNGNTIFHMA 222
            ++  +  G   LH+A  +  L I      +E+    LV        +   NG T  H+A
Sbjct: 109 ILKATNYNGHTCLHLASIHGYLGI------VEL----LVSLGADVNAQEPCNGRTALHLA 158

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 37/179 (20%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL-- 87
           T LH+A  T + ++   LL    D  L     ++  GNT LH        L     VL  
Sbjct: 47  TPLHLAVITNQPEIAEALLGAGCDPEL-----RDFRGNTPLHLACEQGC-LASV-GVLTQ 99

Query: 88  ----RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKT 142
                    +L   N NG T L  A+ +G + I   L   +S G D          N + 
Sbjct: 100 SCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL---VSLGAD---------VNAQE 147

Query: 143 NV-----LHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
                  LH+A+        ++V  +L     A V  +  +G +   +        I +
Sbjct: 148 PCNGRTALHLAV---DLQNPDLVSLLLKC--GADVNRVTYQGYSPYQLTWGRPSTRIQQ 201

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 38/203 (18%), Positives = 75/203 (36%), Gaps = 29/203 (14%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           D+ LH+A   ++  L ++++ ++          QN    T LH    +N    +A + L 
Sbjct: 9   DSFLHLAIIHEEKALTMEVIRQVKGDLAFL-NFQNNLQQTPLHLAVITNQ-PEIA-EALL 65

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT--NVLH 146
            A     +R+  G T L  A   G +     L               L   +      LH
Sbjct: 66  GAGCDPELRDFRGNTPLHLACEQGCLASVGVL---TQSCTTPHLHSILKATNYNGHTCLH 122

Query: 147 IAILSLHFGCIEIVKDILSVYPQAVEH---ID----DEGRNILHVAIKYRQLEIFERVVQ 199
           +A +    G + IV+ +L      V     ++      GR  LH+A+  +  ++   +++
Sbjct: 123 LASIH---GYLGIVE-LL------VSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK 172

Query: 200 MEIPLRRLVRKIDYNGNTIFHMA 222
                   V ++ Y G + + + 
Sbjct: 173 CGA----DVNRVTYQGYSPYQLT 191

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 61.4 bits (150), Expect = 2e-10
 Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 30/197 (15%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH+A++     +V  LL              N    T LH  A + H   VA  +L+ 
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGAS-----PNVSNVKVETPLHMAARAGH-TEVAKYLLQN 69

Query: 90  APGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL 145
                      +  + +T L  AAR G  ++   L    +  + AT             L
Sbjct: 70  -----KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT-------TAGHTPL 117

Query: 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLR 205
           HIA      G +E V  +L         +  +G   LHVA KY ++ + E +++ +    
Sbjct: 118 HIAARE---GHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-- 171

Query: 206 RLVRKIDYNGNTIFHMA 222
                   NG T  H+A
Sbjct: 172 --PNAAGKNGLTPLHVA 186

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 56.3 bits (137), Expect = 9e-09
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 28/171 (16%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH+A     +++V  LL +  +         NK+G T LH  A   H +PVA  VL K
Sbjct: 247 TPLHLAAQEGHAEMVALLLSKQAN-----GNLGNKSGLTPLHLVAQEGH-VPVA-DVLIK 299

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTNV---- 144
              ++      G T L  A+ YG + +  FL   +    D          N KT +    
Sbjct: 300 HGVMVDATTRMGYTPLHVASHYGNIKLVKFL---LQHQADV---------NAKTKLGYSP 347

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
           LH A      G  +IV  +L         +  +G   L +A +   + + +
Sbjct: 348 LHQAA---QQGHTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYISVTD 394

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 54.0 bits (131), Expect = 4e-08
 Identities = 43/201 (21%), Positives = 68/201 (33%), Gaps = 38/201 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL-- 87
           T LH+A      + V+ LL++   Q+        K G T LH  A     + VA ++L  
Sbjct: 115 TPLHIAAREGHVETVLALLEKEASQA-----CMTKKGFTPLHVAAKYGK-VRVA-ELLLE 167

Query: 88  RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI 147
           R A         NG T L  A  +  +DI   L  +                +    LHI
Sbjct: 168 RDAH--PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA-------WNGYTPLHI 218

Query: 148 AILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRL 207
           A        +E+ + +L            +G   LH+A +    E+             L
Sbjct: 219 AAKQ---NQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVA----------LL 264

Query: 208 VRK------IDYNGNTIFHMA 222
           + K       + +G T  H+ 
Sbjct: 265 LSKQANGNLGNKSGLTPLHLV 285

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 51.3 bits (124), Expect = 4e-07
 Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 25/165 (15%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIF 117
             ++G T LH  +   H LP+   +L++     G    + N   ET L  AAR G  ++ 
Sbjct: 10  GGESGLTPLHVASFMGH-LPIVKNLLQR-----GASPNVSNVKVETPLHMAARAGHTEVA 63

Query: 118 NFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE 177
            +L    +  +         ++D+T  LH A      G   +VK +L             
Sbjct: 64  KYLLQNKAKVNAKA------KDDQT-PLHCAA---RIGHTNMVKLLLENNAN-PNLATTA 112

Query: 178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
           G   LH+A +   +E    +++ E         +   G T  H+A
Sbjct: 113 GHTPLHIAAREGHVETVLALLEKEAS----QACMTKKGFTPLHVA 153

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 45.6 bits (109), Expect = 3e-05
 Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 11/131 (8%)

Query: 25  TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVAD 84
           T    T LH+A++     LV  LL    D     +  + K G + LH+ A   H   +  
Sbjct: 308 TRMGYTPLHVASHYGNIKLVKFLLQHQAD-----VNAKTKLGYSPLHQAAQQGH-TDIV- 360

Query: 85  KVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV 144
            +L K        +++G T L  A R G + + + L          T    +    + + 
Sbjct: 361 TLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTD----ETSFVLVSDKHRMSF 416

Query: 145 LHIAILSLHFG 155
                  L   
Sbjct: 417 PETVDEILDVS 427

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 57.5 bits (140), Expect = 1e-09
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 31/167 (18%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK-- 123
            N  LH+    N    V  ++L   P LL  ++ +G   L  +  +   +I +FL  K  
Sbjct: 2   SNYPLHQACMENEFFKVQ-ELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 124 -ISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNI 181
            ++  D+         +      HIA      G +E+VK +     +  +  I ++G   
Sbjct: 61  NVNLDDYPD-------DSGWTPFHIAC---SVGNLEVVKSLYDRPLKPDLNKITNQGVTC 110

Query: 182 LHVAIKYRQLEIFERVVQMEIPLRRL------VRKIDYNGNTIFHMA 222
           LH+A+  +  E+     Q       L      VR  D       H A
Sbjct: 111 LHLAVGKKWFEV----SQF------LIENGASVRIKDKFNQIPLHRA 147

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 54.8 bits (133), Expect = 9e-09
 Identities = 36/206 (17%), Positives = 66/206 (32%), Gaps = 41/206 (19%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
             LH A    +   V +LL         K   + ++++ G   LH + +      +    
Sbjct: 4   YPLHQACMENEFFKVQELL-------HSKPSLLLQKDQDGRIPLHWSVSFQA-HEIT-SF 54

Query: 87  L--RKA-PGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTN 143
           L  +     L    +++G T    A   G +++   L  +    D          N  TN
Sbjct: 55  LLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD---------LNKITN 105

Query: 144 ----VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ 199
                LH+A+        E+ + ++      V   D   +  LH A     L++      
Sbjct: 106 QGVTCLHLAV---GKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKL------ 155

Query: 200 MEIPLRRLVRKI---DYNGNTIFHMA 222
           +E+        +   D  G T    A
Sbjct: 156 IELLCGLGKSAVNWQDKQGWTPLFHA 181

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 49.8 bits (120), Expect = 4e-07
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 30/173 (17%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T  H+A      ++V  L D      L+K       G T LH          V+  ++  
Sbjct: 74  TPFHIACSVGNLEVVKSLYDRPLKPDLNK---ITNQGVTCLHLAVGKKW-FEVSQFLIEN 129

Query: 90  APGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTN-- 143
                G    +++   +  L RAA  G + +   L         +        N +    
Sbjct: 130 -----GASVRIKDKFNQIPLHRAASVGSLKLIELL---CG-LGKS------AVNWQDKQG 174

Query: 144 --VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF 194
              L  A+     G  +    ++  Y    + +D++G     VA+  +  + F
Sbjct: 175 WTPLFHAL---AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 224

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 48/205 (23%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
              +  A YT +     +L  E  D     +       +T   +  +      +    + 
Sbjct: 13  QVKVFRALYTFEPRTPDELYIEEGD-----IIYITDMSDTNWWKGTSKGRTGLIPSNYVA 67

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN---- 143
           +       +  + +  L  AA+ G +         +               N        
Sbjct: 68  E-------QAESIDNPLHEAAKRGNLSWLREC---LDNRVGV---------NGLDKAGST 108

Query: 144 VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203
            L+ A    H G  +IV+ + +     +   +  G   LH A      +I    VQ+   
Sbjct: 109 ALYWAC---HGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADI----VQL--- 158

Query: 204 LRRLVRK------IDYNGNTIFHMA 222
              L+ K       +      F MA
Sbjct: 159 ---LLAKGARTDLRNIEKKLAFDMA 180

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 44/203 (21%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           DT     T   ++ L+                 Q ++ +  LHE A   + L    +   
Sbjct: 46  DTNWWKGTSKGRTGLIPSNYVA----------EQAESIDNPLHEAAKRGN-LSWL-RECL 93

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV---- 144
                +   +  G TAL  A   G  DI   L    +             N + N     
Sbjct: 94  DNRVGVNGLDKAGSTALYWACHGGHKDIVEML---FT-----------QPNIELNQQNKL 139

Query: 145 ----LHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVVQ 199
               LH A      G  +IV+ +L+    A  +  + E +    +A           +++
Sbjct: 140 GDTALHAAA---WKGYADIVQLLLAK--GARTDLRNIEKKLAFDMATNAACAS----LLK 190

Query: 200 MEIPLRRLVRKIDYNGNTIFHMA 222
            +     +    +         +
Sbjct: 191 KKQGTDAVRTLSNAEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 21/161 (13%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
             D  LH A        + + LD         +   +KAG+T L+      H   +  ++
Sbjct: 72  SIDNPLHEAAKRGNLSWLRECLDNRVG-----VNGLDKAGSTALYWACHGGH-KDIV-EM 124

Query: 87  LRKAPG-LLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTNV 144
           L   P   L  +N  G+TAL  AA  G  DI   L   ++ G         L   +K   
Sbjct: 125 LFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLL---LAKGAR-----TDLRNIEKKLA 176

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA 185
             +A    +  C  ++K             + E       +
Sbjct: 177 FDMAT---NAACASLLKKKQG-TDAVRTLSNAEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 24/168 (14%), Positives = 43/168 (25%), Gaps = 35/168 (20%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
             K G   +     +          L    G +    +  +T   +    G+  +     
Sbjct: 8   PVKPGQVKVFRALYTFEPRTP--DELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNY 65

Query: 122 GKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNI 181
                                  LH A      G +  +++ L      V  +D  G   
Sbjct: 66  VAEQAESIDN------------PLHEAA---KRGNLSWLRECLDNRVG-VNGLDKAGSTA 109

Query: 182 LHVAIKYRQLEIFERVVQMEIPLRRLVRKI-------DYNGNTIFHMA 222
           L+ A      +I    V+M      L  +        +  G+T  H A
Sbjct: 110 LYWACHGGHKDI----VEM------LFTQPNIELNQQNKLGDTALHAA 147

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 55.9 bits (135), Expect = 6e-09
 Identities = 34/234 (14%), Positives = 68/234 (29%), Gaps = 41/234 (17%)

Query: 26  IHDDTVLHMATY---TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILH---ETATSNHA 79
           ++D   +  A      ++ + ++  L     +  D   +  + G T L        +   
Sbjct: 11  LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQN 70

Query: 80  -----LPVADKVLRKAPGLLGM----RNNNGETALLRAARYGKVDIFNFL--------AG 122
                L    +        +          G+TAL  A     + +   L        A 
Sbjct: 71  DTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA 130

Query: 123 KISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA--VEHIDDEGRN 180
               +   T+        +   L +A  +     + IVK +L    Q   +   D  G  
Sbjct: 131 ANGDFFKKTKGRPGFYFGEL-PLSLAACT---NQLAIVKFLLQNSWQPADISARDSVGNT 186

Query: 181 ILHVAIKYRQLEIF--ERVVQMEIPLRRLVRKI----------DYNGNTIFHMA 222
           +LH  ++     +   + V  M   +  L  K+          +  G T   +A
Sbjct: 187 VLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 55.6 bits (134), Expect = 9e-09
 Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 16/105 (15%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH----------- 78
             L +A  T +   ++K L +   Q  D  + ++  GNT+LH                  
Sbjct: 150 LPLSLAACTNQLA-IVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTS 207

Query: 79  ---ALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
               + +    L     L  + N  G T L  AA  GK+ +  ++
Sbjct: 208 MYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 31/232 (13%), Positives = 58/232 (25%), Gaps = 60/232 (25%)

Query: 30  TVLHMATYTKKSDL--VIKLL-------DELPDQSLDKMTRQNKAGNTILHETATSNHAL 80
           T L  A     +     I LL       D L        T     G T LH      + +
Sbjct: 56  TCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRN-M 114

Query: 81  PVA-------------DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGY 127
            +                               GE  L  AA   ++ I  FL      +
Sbjct: 115 TLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN--SW 172

Query: 128 DHATRLPFLHRNDKTN----VLHIAILSLHF-------------GCIEIVKDILSVYPQA 170
             A        + + +    VLH  +                    + +   +     + 
Sbjct: 173 QPA------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP-TLKL 225

Query: 171 VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
            E  + +G   L +A    ++ +             ++++ + +     H A
Sbjct: 226 EEITNRKGLTPLALAASSGKIGVLA----------YILQR-EIHEPECRHAA 266

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 49.4 bits (118), Expect = 8e-07
 Identities = 31/196 (15%), Positives = 53/196 (27%), Gaps = 30/196 (15%)

Query: 63  NKAGNTILHETATSNHA------LPVADKVLRKAPGLLGMRNNNGETALLRA---ARYGK 113
                  + +    ++       LP   +  ++           G+T LL+A      G+
Sbjct: 10  RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ 69

Query: 114 VDIFNFLAGKISGYDHATRLPFLHRNDKTNV----LHIAILSLHFGCIEIVKDILS---- 165
            D    L       D   +       D        LHIAI       + +V  ++     
Sbjct: 70  NDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIER---RNMTLVTLLVENGAD 126

Query: 166 ---------VYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN 216
                                G   L +A    QL I + ++Q        +   D  GN
Sbjct: 127 VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ-NSWQPADISARDSVGN 185

Query: 217 TIFHMAGIKRKDYVAE 232
           T+ H       + V  
Sbjct: 186 TVLHALVEVADNTVDN 201

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 55.2 bits (134), Expect = 8e-09
 Identities = 27/148 (18%), Positives = 45/148 (30%), Gaps = 29/148 (19%)

Query: 60  TRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVD 115
           TR ++ G+T LH      + LP     L       G    + NN  +T L  A       
Sbjct: 3   TRADEDGDTPLHIAVVQGN-LPAV-HRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPS 60

Query: 116 IFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILS---VY 167
           +   L   ++ G                       H+A           ++ +L      
Sbjct: 61  VVRLL---VTAGASP---------MALDRHGQTAAHLAC---EHRSPTCLRALLDSAAPG 105

Query: 168 PQAVEHIDDEGRNILHVAIKYRQLEIFE 195
              +E  + +G   LHVA+     E  +
Sbjct: 106 TLDLEARNYDGLTALHVAVNTECQETVQ 133

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 52.8 bits (128), Expect = 4e-08
 Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 43/209 (20%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL- 87
           DT LH+A        V +L++       +     N    T LH    +     V  ++L 
Sbjct: 10  DTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTL-PSVV-RLLV 66

Query: 88  -RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN-- 143
              A       + +G+TA   A  +        L   +         L       +    
Sbjct: 67  TAGAS--PMALDRHGQTAAHLACEHRSPTCLRAL---LDSAAPGTLDL-----EARNYDG 116

Query: 144 --VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDE-GRNILHVAIKYRQLEIFERVVQ 199
              LH+A+   +  C E V+ +L     A ++ +D + GR+ L  A++   L     +VQ
Sbjct: 117 LTALHVAV---NTECQETVQLLLER--GADIDAVDIKSGRSPLIHAVENNSLS----MVQ 167

Query: 200 MEIPLRRLVRK------IDYNGNTIFHMA 222
           +      L++         Y+G++  H A
Sbjct: 168 L------LLQHGANVNAQMYSGSSALHSA 190

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 43/210 (20%), Positives = 67/210 (31%), Gaps = 51/210 (24%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
           T LH+A  T     V++LL       +         ++ G T  H             + 
Sbjct: 48  TPLHLAVITTLPS-VVRLL-------VTAGASPMALDRHGQTAAHLACEHRS-PTCL-RA 97

Query: 87  L--RKAPGLLGM--RNNNGETALLRAARYGKVDIFNFLAGK---ISGYDHATRLPFLHRN 139
           L    APG L +  RN +G TAL  A      +    L  +   I   D           
Sbjct: 98  LLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVD---------IK 148

Query: 140 DKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVV 198
              + L  A+       + +V+ +L     A V      G + LH A     L +    V
Sbjct: 149 SGRSPLIHAV---ENNSLSMVQLLLQH--GANVNAQMYSGSSALHSASGRGLLPL----V 199

Query: 199 QMEIPLRRLVRK------IDYNGNTIFHMA 222
           +       LVR        + + +T   +A
Sbjct: 200 RT------LVRSGADSSLKNCHNDTPLMVA 223

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 49.4 bits (119), Expect = 6e-07
 Identities = 31/182 (17%), Positives = 54/182 (29%), Gaps = 45/182 (24%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL-- 87
           T  H+A   +    +  LLD     +LD    +N  G T LH    +        ++L  
Sbjct: 81  TAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTEC-QETV-QLLLE 137

Query: 88  ------RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR--- 138
                             +G + L+ A     + +   L   +            H    
Sbjct: 138 RGADIDAVD-------IKSGRSPLIHAVENNSLSMVQLL---LQ-----------HGANV 176

Query: 139 NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEI 193
           N +       LH A      G + +V+ ++     A     +      L VA   R ++I
Sbjct: 177 NAQMYSGSSALHSAS---GRGLLPLVRTLVRS--GADSSLKNCHNDTPLMVARSRRVIDI 231

Query: 194 FE 195
             
Sbjct: 232 LR 233

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 55.2 bits (134), Expect = 2e-08
 Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 48/218 (22%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
             LH A      + V +LL       L     +   +    T LHE A+ N  + V   +
Sbjct: 93  VPLHNACSYGHYE-VTELL-------LKHGACVNAMDLWQFTPLHEAASKNR-VEVC-SL 142

Query: 87  L--RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK-----ISGYDHATRLPFL--- 136
           L    A     + N +G++A+  A      +   +          +      ++      
Sbjct: 143 LLSHGAD--PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAL 200

Query: 137 ------HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ 190
                         LH A+ SLH    ++ + +L      V   + +    LHVA +   
Sbjct: 201 EIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTPLHVAAERAH 259

Query: 191 LEIFERVVQMEIPLRRLVRK------IDYNGNTIFHMA 222
            ++      ME+    L +       +D  G T  H A
Sbjct: 260 NDV------MEV----LHKHGAKMNALDSLGQTALHRA 287

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 36/192 (18%), Positives = 64/192 (33%), Gaps = 41/192 (21%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
             +     L E A S +   +   +L          +    T L  AA Y +V I   L 
Sbjct: 20  TGEYKKDELLEAARSGNEEKLM-ALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLL- 77

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHID 175
             +  G D          + K       LH A     +G  E+ + +L     A V  +D
Sbjct: 78  --LQHGADV---------HAKDKGGLVPLHNAC---SYGHYEVTELLLKH--GACVNAMD 121

Query: 176 DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK------IDYNGNTIFHMAGIK-RKD 228
                 LH A    ++E+        +    L+        ++ +G +   MA     ++
Sbjct: 122 LWQFTPLHEAASKNRVEV------CSL----LLSHGADPTLVNCHGKSAVDMAPTPELRE 171

Query: 229 YVAEKMEGPALL 240
            +  + +G +LL
Sbjct: 172 RLTYEFKGHSLL 183

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 44.4 bits (106), Expect = 5e-05
 Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 44/216 (20%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH+A    +  +V  LL    D  +     ++K G   LH   +  H   V  ++L K
Sbjct: 60  TPLHLAAGYNRVRIVQLLLQHGAD--VHA---KDKGGLVPLHNACSYGH-YEVT-ELLLK 112

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFL------------AGKI-----SGYDHATR 132
               +   +    T L  AA   +V++ + L             GK         +   R
Sbjct: 113 HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172

Query: 133 LPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLE 192
           L +       ++L  A        +  VK  L++               LH A+     +
Sbjct: 173 LTYE--FKGHSLLQAA----READLAKVKKTLALEI-INFKQPQSHETALHCAVASLHPK 225

Query: 193 IFERVVQMEIPLRRLVRK------IDYNGNTIFHMA 222
             + V ++      L+RK       + +  T  H+A
Sbjct: 226 RKQ-VAEL------LLRKGANVNEKNKDFMTPLHVA 254

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 35/174 (20%), Positives = 54/174 (31%), Gaps = 44/174 (25%)

Query: 26  IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHA--LPVA 83
               ++L  A        V K L            +Q ++  T LH    S H     VA
Sbjct: 177 FKGHSLLQAARE-ADLAKVKKTLALEII-----NFKQPQSHETALHCAVASLHPKRKQVA 230

Query: 84  DKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR- 138
           + +LRK     G     +N +  T L  AA     D+   L                H  
Sbjct: 231 ELLLRK-----GANVNEKNKDFMTPLHVAAERAHNDVMEVL---HK-----------HGA 271

Query: 139 --NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVA 185
             N   +     LH A L+   G ++  + +LS    +    I  +G     + 
Sbjct: 272 KMNALDSLGQTALHRAALA---GHLQTCRLLLSY--GSDPSIISLQGFTAAQMG 320

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 40/224 (17%), Positives = 64/224 (28%), Gaps = 60/224 (26%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNH-------- 78
           T LH A    + + V  LL       L      T  N  G + +    T           
Sbjct: 126 TPLHEAASKNRVE-VCSLL-------LSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177

Query: 79  ----ALPVADKV-LRKAPGLLG------MRNNNGETALLRAARYG---KVDIFNFLAGKI 124
                L  A +  L K    L        +  + ETAL  A       +  +   L   +
Sbjct: 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELL---L 234

Query: 125 S-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEG 178
             G +          N+K       LH+A         ++++ +      A +  +D  G
Sbjct: 235 RKGAN---------VNEKNKDFMTPLHVAA---ERAHNDVMEVLHKH--GAKMNALDSLG 280

Query: 179 RNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
           +  LH A     L+    ++            I   G T   M 
Sbjct: 281 QTALHRAALAGHLQTCRLLLSYGSD----PSIISLQGFTAAQMG 320

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 53.6 bits (130), Expect = 2e-08
 Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 39/212 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
           T L  A      +  +K L       +     +  ++  G+T LH  A   H   V   +
Sbjct: 46  TPLMEAAENNHLE-AVKYL-------IKAGALVDPKDAEGSTCLHLAAKKGH-YEVVQYL 96

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN-- 143
           L      +  +++ G T ++ A  Y  VD+   L   +S G D          N + N  
Sbjct: 97  LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL---LSKGSD---------INIRDNEE 144

Query: 144 --VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVVQM 200
              LH A      GC++I + +L+   +  +  ++  G + LH+A +  + +     V +
Sbjct: 145 NICLHWAA---FSGCVDIAEILLAA--KCDLHAVNIHGDSPLHIAARENRYDC----VVL 195

Query: 201 EIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE 232
            +     V   +  G T    A +  + + A 
Sbjct: 196 FLSRDSDVTLKNKEGETPLQCASLNSQVWSAL 227

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 52.0 bits (126), Expect = 7e-08
 Identities = 34/176 (19%), Positives = 63/176 (35%), Gaps = 46/176 (26%)

Query: 62  QNKAGNTILHETATSNHALPVADKVL--RKAPGLLGMRNNNGETALLRAARYGKVDIFNF 119
           +++   + LH  A + H + +   +L    A   +   + +  T L+ AA    ++   +
Sbjct: 7   EHQNKRSPLHAAAEAGH-VDIC-HMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKY 62

Query: 120 LAGKISGYDHATRLPFLHR---NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVE 172
           L   I                 + K       LH+A      G  E+V+ +LS     V 
Sbjct: 63  L---IK-----------AGALVDPKDAEGSTCLHLAA---KKGHYEVVQYLLSNGQMDVN 105

Query: 173 HIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK------IDYNGNTIFHMA 222
             DD G   +  A +Y+ ++    +V++      L+ K       D   N   H A
Sbjct: 106 CQDDGGWTPMIWATEYKHVD----LVKL------LLSKGSDINIRDNEENICLHWA 151

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 43.2 bits (103), Expect = 7e-05
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 21/105 (20%)

Query: 96  MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAIL 150
           M + N  + L  AA  G VDI + L   +  G +          +  +      L  A  
Sbjct: 6   MEHQNKRSPLHAAAEAGHVDICHML---VQAGAN---------IDTCSEDQRTPLMEAA- 52

Query: 151 SLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
                 +E VK ++      V+  D EG   LH+A K    E+ +
Sbjct: 53  --ENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVVQ 94

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 40.5 bits (96), Expect = 6e-04
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 33/144 (22%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
           T +  AT  K  D ++KLL       L K   +  ++   N  LH  A S   + +A ++
Sbjct: 113 TPMIWATEYKHVD-LVKLL-------LSKGSDINIRDNEENICLHWAAFSGC-VDIA-EI 162

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN-- 143
           L  A   L   N +G++ L  AAR  + D        +S   D            K    
Sbjct: 163 LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLF---LSRDSD---------VTLKNKEG 210

Query: 144 --VLHIAILSLHFGCIEIVKDILS 165
              L  A        +     +  
Sbjct: 211 ETPLQCAS---LNSQVWSALQMSK 231

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 19/152 (12%), Positives = 44/152 (28%), Gaps = 26/152 (17%)

Query: 100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHF-GCIE 158
           +    +  AA  G  + F  L  K  GY+            K+N+L+  + + +     +
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEK--GYEDK------ESVLKSNILYDVLRNNNDEARYK 56

Query: 159 IVKDILSVYPQA---VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK----- 210
           I   +++        ++    EG  +     +    +I       +I     + K     
Sbjct: 57  ISMFLIN----KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKI----FLEKGADIT 108

Query: 211 -IDYNGNTIFHMAGIKRKDYVAEKMEGPALLL 241
            +      +             E +    L+ 
Sbjct: 109 ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIF 140

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 24/183 (13%), Positives = 51/183 (27%), Gaps = 36/183 (19%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
             +  A      +  ++L ++  +       +++   + IL+     N+      K+   
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYED------KESVLKSNILY-DVLRNNNDEARYKISMF 60

Query: 90  APGLLG------MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR----- 138
              L+        R   G T      + G  DI               ++ FL +     
Sbjct: 61  ---LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTE--------LCKI-FLEKGADIT 108

Query: 139 ---NDKTNVLHIAILSLHF---GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLE 192
                   V+   I +        I + K I S     +   D  G   L    + ++  
Sbjct: 109 ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPI 168

Query: 193 IFE 195
             +
Sbjct: 169 ALK 171

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 20/107 (18%)

Query: 27  HDDTVLHMATYTKKSDLV-----IKLLDELPDQSLDK---MTRQNKAGNTILHETATSNH 78
              T+         +D+       K+        L+K   +T   K    ++ +   +  
Sbjct: 74  EGTTLFFPLFQGGGNDITGTTELCKIF-------LEKGADITALYKPYKIVVFKNIFNYF 126

Query: 79  A-----LPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
                 +P+   +  ++   L +++  G TAL    R  K      +
Sbjct: 127 VDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMM 173

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 53.2 bits (129), Expect = 4e-08
 Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 33/174 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH+A    +SD   +LL+   D        Q+  G T LH   +++    V   ++R 
Sbjct: 59  TALHLAARYSRSDAAKRLLEASAD-----ANIQDNMGRTPLHAAVSADA-QGVFQILIRN 112

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR---NDKTN--- 143
               L  R ++G T L+ AAR     +   L   I+                N   +   
Sbjct: 113 RATDLDARMHDGTTPLILAARLAVEGMLEDL---IN-----------SHADVNAVDDLGK 158

Query: 144 -VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
             LH A        ++    +L     A  +  ++     L +A +    E  +
Sbjct: 159 SALHWAA---AVNNVDAAVVLLKN--GANKDMQNNREETPLFLAAREGSYETAK 207

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 50.2 bits (121), Expect = 4e-07
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 39/184 (21%)

Query: 30  TVLHMATYTKKSDLVIKLLDE---------LPDQSLDKMTRQNKAGNTILHETATSNHAL 80
           T L +A+ +          +E            Q      + ++ G T LH  A  +   
Sbjct: 12  TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR-S 70

Query: 81  PVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFL----AGKISGYDHATR 132
             A K L +A         +++N G T L  A       +F  L    A  +        
Sbjct: 71  DAA-KRLLEA----SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM---- 121

Query: 133 LPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQL 191
                 +D T  L +A          +++D+++    A V  +DD G++ LH A     +
Sbjct: 122 ------HDGTTPLILAA---RLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAAVNNV 170

Query: 192 EIFE 195
           +   
Sbjct: 171 DAAV 174

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 49.0 bits (118), Expect = 1e-06
 Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 27/171 (15%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH A        V ++L       LD    +   G T L   A       +  + L  
Sbjct: 92  TPLHAAVSADAQG-VFQILIRNRATDLDA---RMHDGTTPLILAARLAV-EGML-EDLIN 145

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----V 144
           +   +   ++ G++AL  AA    VD    L   +  G +         ++ + N     
Sbjct: 146 SHADVNAVDDLGKSALHWAAAVNNVDAAVVL---LKNGAN---------KDMQNNREETP 193

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
           L +A      G  E  K +L  +    +  D   R    +A +    +I  
Sbjct: 194 LFLAA---REGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVR 240

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 19/110 (17%)

Query: 97  RNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFL--HRNDKTNV--------LH 146
           R  +G T L+ A+  G          +    D    +           N         LH
Sbjct: 6   RGPDGFTPLMIASCSGGGLETGNSEEE---EDAPAVISDFIYQGASLHNQTDRTGETALH 62

Query: 147 IAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
           +A     +   +  K +L     A     D+ GR  LH A+      +F+
Sbjct: 63  LAA---RYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQ 107

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 34/206 (16%), Positives = 56/206 (27%), Gaps = 51/206 (24%)

Query: 30  TVLHMATYTKKS---DLVIKLLDELPDQSL------DKMTRQNKAGNTILHETATSNHAL 80
           T L  A     +   D +  LLD                      G T LH         
Sbjct: 48  TCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRC-K 106

Query: 81  PVA-------------DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-G 126
                            +     P   G     GE  L  AA   +  I ++L      G
Sbjct: 107 HYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL---TENG 163

Query: 127 YDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVEH--------- 173
           +  A          + +    VLH  +        E  K +  +Y   +           
Sbjct: 164 HKQA------DLRRQDSRGNTVLHALVAIAD-NTRENTKFVTKMYDLLLIKCAKLFPDTN 216

Query: 174 ----IDDEGRNILHVAIKYRQLEIFE 195
               ++++G + L +A K  ++ IF+
Sbjct: 217 LEALLNNDGLSPLMMAAKTGKIGIFQ 242

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 16/105 (15%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
             L +A  T +   ++  L E   +  D + RQ+  GNT+LH             K + K
Sbjct: 142 LPLSLAACTNQPH-IVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTK 199

Query: 90  APGLL--------------GMRNNNGETALLRAARYGKVDIFNFL 120
              LL               + NN+G + L+ AA+ GK+ IF  +
Sbjct: 200 MYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 33/199 (16%), Positives = 55/199 (27%), Gaps = 36/199 (18%)

Query: 57  DKMTRQNKAGNTILHETATSNHA--LPVADKVLRKAPGLLGM----------RNNNGETA 104
           D+  R+   G T L +   +  A        +L  A     M              G+TA
Sbjct: 37  DEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTA 96

Query: 105 LLRAARYGKVDIFNFL--AG-----KISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCI 157
           L  A           L   G     +  G     +    +       L +A  +      
Sbjct: 97  LHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT---NQP 153

Query: 158 EIVKDILSVYPQA--VEHIDDEGRNILHVAIKYR--QLEIFERVVQM----------EIP 203
            IV  +     +   +   D  G  +LH  +       E  + V +M            P
Sbjct: 154 HIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFP 213

Query: 204 LRRLVRKIDYNGNTIFHMA 222
              L   ++ +G +   MA
Sbjct: 214 DTNLEALLNNDGLSPLMMA 232

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 5e-08
 Identities = 38/245 (15%), Positives = 72/245 (29%), Gaps = 64/245 (26%)

Query: 7   QKVIELCRKV--PD------HALYVFTIHDDT-----VLHMATYTKKSDLVIKLLDELPD 53
             +IE    V  P         L VF           +L +  +      V+ ++++L  
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFP--PSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413

Query: 54  QSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN------NNGETA--- 104
            SL  + +Q K     +             +  L ++  ++   N      ++       
Sbjct: 414 YSL--VEKQPKESTISIPSIYLELKVKLENEYALHRS--IVDHYNIPKTFDSDDLIPPYL 469

Query: 105 -----------LLRAARYGKVDIF-------NFLAGKISGYDHATRLPFLHRNDKTNVL- 145
                      L       ++ +F        FL  KI          +       N L 
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI----RHDSTAWNASGSILNTLQ 525

Query: 146 -------HIAILSLHFGCIEIVKDILSVYPQAVEH-IDDEGRNILHVAIKYRQLEIFE-- 195
                  +I      +    +V  IL   P+  E+ I  +  ++L +A+      IFE  
Sbjct: 526 QLKFYKPYICDNDPKYE--RLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEA 583

Query: 196 -RVVQ 199
            + VQ
Sbjct: 584 HKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 41/276 (14%), Positives = 97/276 (35%), Gaps = 54/276 (19%)

Query: 9   VIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 68
            +++C          F I     L++       + V+++L +L  Q     T ++   + 
Sbjct: 167 ALDVCLSYKVQCKMDFKIF---WLNLKNC-NSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222

Query: 69  ILHETATSNHALP--VADKVLRKAPGLLGMRN-NNGETA--------LLRAARYGKVDIF 117
           I     +    L   +  K       LL + N  N +          +L   R+    + 
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENC--LLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVT 278

Query: 118 NFLAGKISGYDHATRLPFLHRND---KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI 174
           +FL+         T +   H +       V  + +  L     ++ +++L+  P+ +  I
Sbjct: 279 DFLSAA-----TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333

Query: 175 DDEGRNILHVAIKYRQLEI--FERVVQMEI----P--LRRLVRKIDYNGNTIFHMAGIKR 226
            +  R+ L     ++ +       +++  +    P   R++     ++  ++F       
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM-----FDRLSVF------P 382

Query: 227 KDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNH 262
                  +  P +LL   L+W++ +KS  M   +N 
Sbjct: 383 PS---AHI--PTILL--SLIWFDVIKSDVM-VVVNK 410

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 52.6 bits (126), Expect = 5e-08
 Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 26  IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPV 82
           + +  + ++A    K D + + +       L      TR ++   T LH   ++ H   +
Sbjct: 5   VSNIMICNLAYS-GKLDELKERI-------LADKSLATRTDQDSRTALHWACSAGH-TEI 55

Query: 83  ADKVL--RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND 140
             + L     P  +  +++ G + L  AA  G  +I   L  K +  +           +
Sbjct: 56  V-EFLLQLGVP--VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN-------QN 105

Query: 141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM 200
               LH A         EI   +L       +  D      +H A     L++   ++  
Sbjct: 106 GCTPLHYAA---SKNRHEIAVMLLE-GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY 161

Query: 201 EIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE 232
           +          D  GNT  H+A  + +   A+
Sbjct: 162 KAS----TNIQDTEGNTPLHLACDEERVEEAK 189

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 46.8 bits (111), Expect = 5e-06
 Identities = 34/143 (23%), Positives = 49/143 (34%), Gaps = 25/143 (17%)

Query: 97  RNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILS 151
            + +  TAL  A   G  +I  FL   +  G            NDK +     LHIA   
Sbjct: 36  TDQDSRTALHWACSAGHTEIVEFL---LQLGVP---------VNDKDDAGWSPLHIAA-- 81

Query: 152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKI 211
              G  EIVK +L      V  ++  G   LH A    + EI   +++            
Sbjct: 82  -SAGXDEIVKALLV-KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN----PDAK 135

Query: 212 DYNGNTIFHMAGIKRKDYVAEKM 234
           D+   T  H A  K    +   +
Sbjct: 136 DHYDATAMHRAAAKGNLKMVHIL 158

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 33/172 (19%), Positives = 51/172 (29%), Gaps = 17/172 (9%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH+A   +    +  LL        + +  QN  G T LH  A         +K+   
Sbjct: 11  TALHLAVIHQHEPFLDFLLGFSAGH--EYLDLQNDLGQTALHLAAILGE-ASTVEKLYAA 67

Query: 90  APGLLG----MRNNNGETALLRAARYGKVDIFNFL----AGKISGYDHATRLPFLHRNDK 141
                G    +    G TAL  A R         L                         
Sbjct: 68  -----GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 142 TNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEI 193
           T+    A+ S      E        +   +E  + +G   LHVA+ ++  E+
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDED-WRLQLEAENYDGHTPLHVAVIHKDAEM 173

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 26/183 (14%), Positives = 43/183 (23%), Gaps = 37/183 (20%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLD--------KMTRQNKAGNTILHETATSNHALP 81
           T LH+A   +       LL   P    D                 +      +  N    
Sbjct: 80  TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENE 139

Query: 82  VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR--- 138
              +       L    N +G T L  A  +   ++   L                     
Sbjct: 140 EEPRDEDWRLQL-EAENYDGHTPLHVAVIHKDAEMVRLL---RD-----------AGADL 184

Query: 139 NDKTN-----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLE 192
           N          LH+A+         +++ +L     A        GR  L  A+      
Sbjct: 185 NKPEPTCGRTPLHLAV---EAQAASVLELLLKA--GADPTARMYGGRTPLGSALLRPNPI 239

Query: 193 IFE 195
           +  
Sbjct: 240 LAR 242

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 20/109 (18%)

Query: 93  LLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTNV----LHI 147
           + G    +G+TAL  A  +      +FL   +     H       + + + ++    LH+
Sbjct: 1   VFGYVTEDGDTALHLAVIHQHEPFLDFL---LGFSAGHE------YLDLQNDLGQTALHL 51

Query: 148 AILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
           A      G    V+ + +    A V   +  G   LH+A + R      
Sbjct: 52  AA---ILGEASTVEKLYAA--GAGVLVAERGGHTALHLACRVRAHTCAC 95

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 52.5 bits (127), Expect = 9e-08
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 31/183 (16%)

Query: 19  HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETAT 75
           + L    + D + +H A       L ++ L       + +   +        + LHE   
Sbjct: 50  NPLMGDAVSDWSPMHEAAI-HGHQLSLRNL-------ISQGWAVNIITADHVSPLHEACL 101

Query: 76  SNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYD-HATRL 133
             H L    K+L K    +     +  T L  A   G  D  N L   +  G        
Sbjct: 102 GGH-LSCV-KILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL---LQHGASVQPE-- 154

Query: 134 PFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLE 192
                +D  + +H A      G +E V  +++      ++H        L++A + +Q  
Sbjct: 155 -----SDLASPIHEAA---RRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRA 204

Query: 193 IFE 195
             +
Sbjct: 205 CVK 207

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 31/208 (14%), Positives = 60/208 (28%), Gaps = 44/208 (21%)

Query: 25  TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALP 81
           T    + LH A         +K+L       L     +       +T L     S     
Sbjct: 89  TADHVSPLHEACLGGHLS-CVKIL-------LKHGAQVNGVTADWHTPLFNACVSGS-WD 139

Query: 82  VADKVLRKAPGLLG---MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR 138
             + +L+      G      ++  + +  AAR G V+  N L     G +          
Sbjct: 140 CVNLLLQH-----GASVQPESDLASPIHEAARRGHVECVNSLIAY--GGN---------I 183

Query: 139 NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF 194
           + K +     L++A           VK +L     A  +      + LH  ++    E+ 
Sbjct: 184 DHKISHLGTPLYLAC---ENQQRACVKKLLES--GADVNQGKGQDSPLHAVVRTASEEL- 237

Query: 195 ERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
                + +      +  +  G     + 
Sbjct: 238 ---ACLLMDFGADTQAKNAEGKRPVELV 262

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 31/176 (17%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
           T L++A +    + + K L       +D+   +  QN   ++             +   +
Sbjct: 41  TPLNIAVHNNDIE-IAKAL-------IDRGADINLQNSISDSPYLYAGAQGR-TEILAYM 91

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GY---DHATRLPFLHRNDKT 142
           L+ A   L   N  G  AL+ AA  G +D    L   +  G    D          +   
Sbjct: 92  LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL---LEDGREDIDFQN-------DFGY 141

Query: 143 NVLHIAILSLHF--GCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
             L  A+          +IVK ++     A     D+ GR  +  A +    EI +
Sbjct: 142 TALIEAVGLREGNQLYQDIVKLLMEN--GADQSIKDNSGRTAMDYANQKGYTEISK 195

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 48.6 bits (117), Expect = 8e-07
 Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 22/139 (15%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
           +      +L      +    V  ++L+     +   +  G T L  A     ++I   L 
Sbjct: 2   KTYEVGALLEAANQRDT-KKVK-EILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKAL- 58

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD 176
             I  G D          N + +        A      G  EI+  +L      +   + 
Sbjct: 59  --IDRGAD---------INLQNSISDSPYLYAG---AQGRTEILAYMLKHATPDLNKHNR 104

Query: 177 EGRNILHVAIKYRQLEIFE 195
            G N L  A +   ++  +
Sbjct: 105 YGGNALIPAAEKGHIDNVK 123

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 43.2 bits (103), Expect = 6e-05
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 23/104 (22%)

Query: 96  MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAIL 150
           M+       L  A +     +   L       Y           ++        L+IA+ 
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEIL---QDTTYQ---------VDEVDTEGNTPLNIAV- 47

Query: 151 SLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEI 193
             H   IEI K ++     A +   +    +    A    + EI
Sbjct: 48  --HNNDIEIAKALIDR--GADINLQNSISDSPYLYAGAQGRTEI 87

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 49.7 bits (120), Expect = 2e-07
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 27/141 (19%)

Query: 62  QNKAGNTILHETATSNHALPVADKVL--RKAPGLLGMRNNNGETALLRAARYGKVDIFNF 119
           QN  G T L       +   +A + L  R A     +++  G   +  AAR G +D    
Sbjct: 34  QNGFGRTALQ-VMKLGN-PEIA-RRLLLRGAN--PDLKDRTGFAVIHDAARAGFLDTLQT 88

Query: 120 LAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVEHI 174
           L   +    D          N + N     LH+A      G + +V+ ++      V H 
Sbjct: 89  L---LEFQAD---------VNIEDNEGNLPLHLAA---KEGHLRVVEFLVKHTASNVGHR 133

Query: 175 DDEGRNILHVAIKYRQLEIFE 195
           + +G     +A  Y + E+  
Sbjct: 134 NHKGDTACDLARLYGRNEVVS 154

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 42.0 bits (100), Expect = 9e-05
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 22/103 (21%)

Query: 98  NNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSL 152
                  L  AA  G ++    L   +    +          N +       L +     
Sbjct: 2   AEPWGNELASAAARGDLEQLTSL---LQNNVNV---------NAQNGFGRTALQVMK--- 46

Query: 153 HFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
             G  EI + +L       +  D  G  ++H A +   L+  +
Sbjct: 47  -LGNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAGFLDTLQ 87

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 39.3 bits (93), Expect = 7e-04
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 16/96 (16%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
            V+H A      D  ++ L       L+    +  ++  GN  LH  A   H L V  + 
Sbjct: 72  AVIHDAARAGFLD-TLQTL-------LEFQADVNIEDNEGNLPLHLAAKEGH-LRVV-EF 121

Query: 87  L--RKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           L    A  + G RN+ G+TA   A  YG+ ++ + +
Sbjct: 122 LVKHTASNV-GHRNHKGDTACDLARLYGRNEVVSLM 156

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 16/105 (15%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILH------ETATSNHALPVA 83
             L +A  TK+ D V+  L E P Q        +  GNT+LH      + +  N AL + 
Sbjct: 138 LPLSLAACTKQWD-VVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIH 195

Query: 84  --------DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
                      L     L  + N+ G T L  AA+ GK++IF  +
Sbjct: 196 MYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 40/199 (20%), Positives = 62/199 (31%), Gaps = 38/199 (19%)

Query: 30  TVLHMATYTKKS---DLVIKLLDELPDQSLDK------MTRQNKAGNTILHETATSNHAL 80
           T L  A    +      ++ LL    D    K       T +   G++ LH         
Sbjct: 45  TCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQ 104

Query: 81  PV-------ADKVLR----KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDH 129
            V       AD  LR          G     GE  L  AA   + D+  +L   +     
Sbjct: 105 CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL---LENPHQ 161

Query: 130 ATRLPFLHRNDKTNVLHIAIL---------SLHF----GCIEIVKDILSVYPQAVEHIDD 176
              L        T VLH  ++         +L      G +++   +     Q  E  + 
Sbjct: 162 PASLEATDSLGNT-VLHALVMIADNSPENSALVIHMYDGLLQMGARLCP-TVQLEEISNH 219

Query: 177 EGRNILHVAIKYRQLEIFE 195
           +G   L +A K  ++EIF 
Sbjct: 220 QGLTPLKLAAKEGKIEIFR 238

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 49.0 bits (117), Expect = 9e-07
 Identities = 32/233 (13%), Positives = 58/233 (24%), Gaps = 44/233 (18%)

Query: 28  DDTVLHMATY---TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH------ 78
           D   L         ++   +++ L        D    +   G T L +   +        
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 79  --------ALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL--AG-----K 123
                         K L  A          G +AL  A     +     L   G     +
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQ--CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR 119

Query: 124 ISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA--VEHIDDEGRNI 181
             G              +   L +A         ++V  +L    Q   +E  D  G  +
Sbjct: 120 ACGRFFQKHQGTCFYFGEL-PLSLAAC---TKQWDVVTYLLENPHQPASLEATDSLGNTV 175

Query: 182 LHVAIKYRQ------------LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
           LH  +                 +   ++     P  +L    ++ G T   +A
Sbjct: 176 LHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLA 228

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 35/177 (19%), Positives = 61/177 (34%), Gaps = 38/177 (21%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH AT      +V++L+    D      +  +  G + +H  A   H   +   ++ K
Sbjct: 78  TPLHWATRQGHLSMVVQLMKYGAD-----PSLIDGEGCSCIHLAAQFGH-TSIVAYLIAK 131

Query: 90  APGLLG----MRNNNGETALLRAARYG-KVDIFNFLAGKISGYDHATRLPFLHRNDKTNV 144
                G    M + NG T L+ AA     VD    L                  N     
Sbjct: 132 -----GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF--NVSV---------NLGDKY 175

Query: 145 -----LHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
                LH A+     G   ++  +L     A V+  + +G + L +A + + + +  
Sbjct: 176 HKNTALHWAV---LAGNTTVISLLLEA--GANVDAQNIKGESALDLAKQRKNVWMIN 227

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 45.1 bits (108), Expect = 1e-05
 Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 36/170 (21%)

Query: 63  NKAGNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFN 118
           +      + +            +++       G      +    T L  AA   ++D+  
Sbjct: 6   DDYSTWDIVKATQYGI-YERCRELVEA-----GYDVRQPDKENVTLLHWAAINNRIDLVK 59

Query: 119 FLAGKIS-GYDHATRLPFLHRNDKTN-----VLHIAILSLHFGCIEIVKDILSVYPQAVE 172
           +    IS G            +          LH A      G + +V  ++        
Sbjct: 60  YY---ISKGAI---------VDQLGGDLNSTPLHWAT---RQGHLSMVVQLMKYGAD-PS 103

Query: 173 HIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
            ID EG + +H+A ++    I   ++         V  +D NG T    A
Sbjct: 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD----VDMMDQNGMTPLMWA 149

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 44.0 bits (105), Expect = 4e-05
 Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 36/137 (26%)

Query: 97  RNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTNV--LHIAILSLH 153
            ++     +++A +YG  +    L   +  GYD       + + DK NV  LH A     
Sbjct: 5   IDDYSTWDIVKATQYGIYERCREL---VEAGYD-------VRQPDKENVTLLHWAA---I 51

Query: 154 FGCIEIVKDILSVYPQA-VEHID-DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK- 210
              I++VK  +S    A V+ +  D     LH A +   L     +V        L++  
Sbjct: 52  NNRIDLVKYYISK--GAIVDQLGGDLNSTPLHWATRQGHLS----MVVQ------LMKYG 99

Query: 211 -----IDYNGNTIFHMA 222
                ID  G +  H+A
Sbjct: 100 ADPSLIDGEGCSCIHLA 116

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 37/216 (17%), Positives = 70/216 (32%), Gaps = 59/216 (27%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
           +    +  AT     +   +L++   D     + + +K   T+LH  A +N  + +  K 
Sbjct: 8   YSTWDIVKATQYGIYERCRELVEAGYD-----VRQPDKENVTLLHWAAINNR-IDLV-KY 60

Query: 87  L--------RKAPGLLGMRNNNGETALLRAARYGKVDIFNFL--AG-KISGYDHATRLPF 135
                    +          +   T L  A R G + +   L   G   S  D       
Sbjct: 61  YISKGAIVDQLG-------GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLID------- 106

Query: 136 LHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVA-IKYRQLEI 193
               +  + +H+A     FG   IV  +++      V+ +D  G   L  A  +   ++ 
Sbjct: 107 ---GEGCSCIHLAA---QFGHTSIVAYLIAK--GQDVDMMDQNGMTPLMWAAYRTHSVD- 157

Query: 194 FERVVQMEIPLRRLV-------RKIDYNGNTIFHMA 222
                ++      L+           Y+ NT  H A
Sbjct: 158 ---PTRL------LLTFNVSVNLGDKYHKNTALHWA 184

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 50.5 bits (122), Expect = 2e-07
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 30/148 (20%)

Query: 57  DKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYG 112
               + ++ G T LH  A  +     A ++L            +++N G T L  A    
Sbjct: 16  SLHNQTDRTGETALHLAARYSR-SDAAKRLLEA-----SADANIQDNMGRTPLHAAVSAD 69

Query: 113 KVDIFNFL----AGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYP 168
              +F  L    A  +              +D T  L +A          +++D+++   
Sbjct: 70  AQGVFQILIRNRATDLDARM----------HDGTTPLILAA---RLAVEGMLEDLINS-- 114

Query: 169 QA-VEHIDDEGRNILHVAIKYRQLEIFE 195
            A V  +DD G++ LH A     ++   
Sbjct: 115 HADVNAVDDLGKSALHWAAAVNNVDAAV 142

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 46.6 bits (112), Expect = 5e-06
 Identities = 33/178 (18%), Positives = 55/178 (30%), Gaps = 41/178 (23%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH A     +  V ++L       LD    +   G T L   A       + +     
Sbjct: 60  TPLHAAVS-ADAQGVFQILIRNRATDLDA---RMHDGTTPLILAARLAV-EGMLE----- 109

Query: 90  APGLL---G----MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDK 141
               L          ++ G++AL  AA    VD    L   +  G +         ++ +
Sbjct: 110 ---DLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL---LKNGAN---------KDMQ 154

Query: 142 TN----VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
            N     L +A      G  E  K +L  +    +  D   R    +A +    +I  
Sbjct: 155 NNREETPLFLAA---REGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVR 208

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 43.6 bits (104), Expect = 5e-05
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 35/145 (24%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T L +A       ++  L++   D     +   +  G + LH  A  N+ +  A  +L+ 
Sbjct: 94  TPLILAARLAVEGMLEDLINSHAD-----VNAVDDLGKSALHWAAAVNN-VDAAVVLLKN 147

Query: 90  APGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN- 143
                G    M+NN  ET L  AAR G  +    L   +    +         R+   + 
Sbjct: 148 -----GANKDMQNNREETPLFLAAREGSYETAKVL---LDHFAN---------RDITDHM 190

Query: 144 ---VLHIAILSLHFGCIEIVKDILS 165
                 IA         +IV+ +  
Sbjct: 191 DRLPRDIAQ---ERMHHDIVRLLDE 212

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 52/215 (24%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
             LH A      D+  + L       + +   +   N  G+T L           +    
Sbjct: 108 IPLHAAASCGYLDIA-EYL-------ISQGAHVGAVNSEGDTPLDIAEEEAM-EELLQN- 157

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV-- 144
                  +  +  + E A     R    D   +L       +         R+ K+    
Sbjct: 158 ------EVNRQGVDIEAARKEEERIMLRDARQWLNSG--HIN-------DVRHAKSGGTA 202

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203
           LH+A      G  E++K ++    +  V   D +G   LH A  + + E      ++   
Sbjct: 203 LHVAA---AKGYTEVLKLLIQA--RYDVNIKDYDGWTPLHAAAHWGKEE----ACRI--- 250

Query: 204 LRRLVRK------IDYNGNTIFHMAGIKRKDYVAE 232
              LV        ++  G T F +A      Y+ E
Sbjct: 251 ---LVENLCDMEAVNKVGQTAFDVADEDILGYLEE 282

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 45/138 (32%)

Query: 97  RNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILS 151
            N +G TAL +A     VD+  FL   +  G +          N   N     LH A   
Sbjct: 69  ANVDGLTALHQACIDDNVDMVKFL---VENGAN---------INQPDNEGWIPLHAAASC 116

Query: 152 LHFGCIEIVK-------DILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPL 204
              G ++I +        + +V        + EG   L +A +    E+ +         
Sbjct: 117 ---GYLDIAEYLISQGAHVGAV--------NSEGDTPLDIAEEEAMEELLQ--------- 156

Query: 205 RRLVRKIDYNGNTIFHMA 222
              V +   +        
Sbjct: 157 -NEVNRQGVDIEAARKEE 173

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 31/205 (15%), Positives = 78/205 (38%), Gaps = 22/205 (10%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           +      ++        ++ D  P+  L+     ++ GNT LH   +  + L +   +++
Sbjct: 97  NQQQQHVSFDSLLQ---EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIAN-LELVKHLVK 152

Query: 89  KAPGLLG----MRNNNGETALLRAARYGK-------VDIFNFLAGKISGYDHATRLPFLH 137
                 G      +N GE+ L++A +            + ++L   +   D   R   LH
Sbjct: 153 H-----GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI-LH 206

Query: 138 RNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERV 197
               T+ +     +  +    ++  I+    + ++   +E  +  +     R+  I E  
Sbjct: 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILE-N 265

Query: 198 VQMEIPLRRLVRKIDYNGNTIFHMA 222
           + ++  +  ++   D NG+T  ++A
Sbjct: 266 LDLKWIIANMLNAQDSNGDTCLNIA 290

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 29/221 (13%), Positives = 65/221 (29%), Gaps = 38/221 (17%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
           +  + N      +  +    V D        L    + +G T L        +++   L 
Sbjct: 92  EGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHL- 150

Query: 122 GKIS-GYDHATRLPFLHRNDKT--NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG 178
             +  G +           D    + L  A+ S++       + +L      +   D   
Sbjct: 151 --VKHGSN-------RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201

Query: 179 RNILHVAIKYRQLEIFERVVQ--MEIPLRRLVR-------KIDYNGNTIFHMAGIKRKDY 229
           R ILH  I    +       +  ++I +  +V+              +  +    +RKD 
Sbjct: 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261

Query: 230 VAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIP 270
           + E ++   ++                   LN +++ G   
Sbjct: 262 ILENLDLKWIIANM----------------LNAQDSNGDTC 286

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 9/100 (9%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQN-------KAGNTILHETATSNHALPV 82
           T+LH    T              D  +  + ++                          +
Sbjct: 203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSI 262

Query: 83  ADKVLRKAPG--LLGMRNNNGETALLRAARYGKVDIFNFL 120
            + +  K     +L  +++NG+T L  AAR G + I + L
Sbjct: 263 LENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL 302

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 28/259 (10%), Positives = 76/259 (29%), Gaps = 50/259 (19%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
             L     T       + +       +    + N     +L +++       +  +++ +
Sbjct: 7   VSLPPGKRTNLRKTGSERIA----HGMRV--KFNPLPLALLLDSSLEGE-FDLVQRIIYE 59

Query: 90  APGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN- 143
                     + N+ G TAL  A   G  +I  FL   +  G +          N   + 
Sbjct: 60  -----VDDPSLPNDEGITALHNAVCAGHTEIVKFL---VQFGVN---------VNAADSD 102

Query: 144 ---VLHIAILSLHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIKYRQLEIFERVV 198
               LH A        +++ K ++       A+ + D +        ++    +      
Sbjct: 103 GWTPLHCAA---SCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQC----S 155

Query: 199 QMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM-EGPALLLQDELLWYERVKSVTMP 257
           Q    ++  +  ++            +  D +  K  +   ++ +++             
Sbjct: 156 QFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDE-------DEIEW 208

Query: 258 HFLNHRNNMGFIPEELFAI 276
            +    +  G++P  L  +
Sbjct: 209 WWARLNDKEGYVPRNLLGL 227

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 26/136 (19%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLGMR---NNNGETALLRAARYGKVDIFNFLAG 122
           G   L     +N       + +       GMR   N      LL ++  G+ D+   +  
Sbjct: 5   GQVSLPPGKRTNL-RKTGSERIAH-----GMRVKFNPLPLALLLDSSLEGEFDLVQRIIY 58

Query: 123 K---ISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR 179
           +    S  +          ++    LH A+ +   G  EIVK ++      V   D +G 
Sbjct: 59  EVDDPSLPN----------DEGITALHNAVCA---GHTEIVKFLVQFGVN-VNAADSDGW 104

Query: 180 NILHVAIKYRQLEIFE 195
             LH A     +++ +
Sbjct: 105 TPLHCAASCNNVQVCK 120

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 34/133 (25%)

Query: 99  NNGETALLRAARYGKVDIFNFLAGKIS-GYD-HATRLPFLHRNDKTNVLHIAILSLHFGC 156
             G+ +L    R       +     I+ G                  +L  + L    G 
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSER---IAHGMRVKFN-------PLPLALLLDSSLE---GE 49

Query: 157 IEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRK----- 210
            ++V+ I+           +DEG   LH A+     E    +V+       LV+      
Sbjct: 50  FDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTE----IVKF------LVQFGVNVN 97

Query: 211 -IDYNGNTIFHMA 222
             D +G T  H A
Sbjct: 98  AADSDGWTPLHCA 110

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 31/140 (22%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
            +K G  +       +      D        L   R++   T L+ A   G  +  + L 
Sbjct: 4   MDKNGEIVEKIKDEKSI-NQNLDF-------LRNYRDSYNRTPLMVACMLGMENAIDKL- 54

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHID 175
             +                DK       L  A+       + I + +LS    + V   D
Sbjct: 55  --VENFDK---------LEDKDIEGSTALIWAV---KNNRLGIAEKLLSK--GSNVNTKD 98

Query: 176 DEGRNILHVAIKYRQLEIFE 195
             G+  L  +I +   E+  
Sbjct: 99  FSGKTPLMWSIIFGYSEMSY 118

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 47.0 bits (113), Expect = 2e-06
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 52/186 (27%)

Query: 27  HDDTVLHMATYTKKSDLVIKLL-------DELPDQSLDKMTRQNKAGNTILHETATSNHA 79
           ++ T L +A      + +   L       ++           ++  G+T L     +N  
Sbjct: 34  YNRTPLMVACMLGMENAI-DKLVENFDKLED-----------KDIEGSTALIWAVKNNR- 80

Query: 80  LPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLP 134
           L +A + L       G     ++ +G+T L+ +  +G  ++  FL   +  G +      
Sbjct: 81  LGIA-EKLLSK----GSNVNTKDFSGKTPLMWSIIFGYSEMSYFL---LEHGAN------ 126

Query: 135 FLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYR 189
               ND+       L +A     +G  EIVK +L +   A +   D  G      A  + 
Sbjct: 127 ---VNDRNLEGETPLIVAS---KYGRSEIVKKLLEL--GADISARDLTGLTAEASARIFG 178

Query: 190 QLEIFE 195
           + E+ +
Sbjct: 179 RQEVIK 184

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 47.0 bits (113), Expect = 2e-06
 Identities = 34/181 (18%), Positives = 57/181 (31%), Gaps = 39/181 (21%)

Query: 63  NKAGNTILHETATSNHALPVADKVLRKAPGL-LGMRNNNGETALLRAARYGKVDIFNFLA 121
           N   +  L E A +   +    K L     +          T L  AA Y +V +  +L 
Sbjct: 5   NSEADRQLLEAAKAGD-VETV-KKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYL- 61

Query: 122 GKISGYDHATRLPFLHR---NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEH 173
             +            H    + K       LH A     +G  E+ + ++     A V  
Sbjct: 62  --LQ-----------HGADVHAKDKGGLVPLHNAC---SYGHYEVAELLVKH--GAVVNV 103

Query: 174 IDDEGRNILHVAIKYRQLEIFERVVQMEIPLRR--LVRKIDYNGNTIFHMAGIKRKDYVA 231
            D      LH A    + EI       ++ L+      K + +GNT   +      D + 
Sbjct: 104 ADLWKFTPLHEAAAKGKYEI------CKLLLQHGADPTKKNRDGNTPLDLVKDGDTD-IQ 156

Query: 232 E 232
           +
Sbjct: 157 D 157

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 46.6 bits (112), Expect = 2e-06
 Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 45/179 (25%)

Query: 30  TVLHMATYTKKSDLVIKLLDEL---PDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
             L  A        V +LL      PD         N+ G T L           +A   
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPD-------ALNRFGKTALQ-VMMFGS-TAIA-LE 53

Query: 87  LRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDK 141
           L K     G    +++ +G + +  AAR G +D    L   +  G D          N  
Sbjct: 54  LLKQ----GASPNVQDTSGTSPVHDAARTGFLDTLKVL---VEHGAD---------VNVP 97

Query: 142 TN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
                  +H+A+     G   +V  + +   ++ +   D  G   L +A++    ++ +
Sbjct: 98  DGTGALPIHLAV---QEGHTAVVSFLAA---ESDLHRRDARGLTPLELALQRGAQDLVD 150

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 39.3 bits (93), Expect = 6e-04
 Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAGNTILHETATSNHALPVADKV 86
           + +H A  T   D  +K+L       ++    +   +  G   +H      H   V   +
Sbjct: 70  SPVHDAARTGFLD-TLKVL-------VEHGADVNVPDGTGALPIHLAVQEGH-TAVVSFL 120

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
             ++   L  R+  G T L  A + G  D+ + L
Sbjct: 121 AAESD--LHRRDARGLTPLELALQRGAQDLVDIL 152

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 46.6 bits (112), Expect = 2e-06
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 26/171 (15%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
            +   +H      +   +   +++        +   ++ G T L   A     + V  + 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENV-----INHTDEEGFTPLMWAAAHGQ-IAVV-EF 54

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK---ISGYDHATRLPFLHRNDKTN 143
           L +      +     E+AL  A   G  DI   L      ++ YD           +   
Sbjct: 55  LLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYD----------WNGGT 104

Query: 144 VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEI 193
            L  A+   H   ++ VK +L     A      D G N + +A+      +
Sbjct: 105 PLLYAV---HGNHVKCVKMLLES--GADPTIETDSGYNSMDLAVALGYRSV 150

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 42.8 bits (102), Expect = 4e-05
 Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 37/168 (22%)

Query: 65  AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK- 123
           A +  +H+ A     +        +   ++   +  G T L+ AA +G++ +  FL    
Sbjct: 2   ANSLSVHQLAAQGE-MLYL-ATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG 59

Query: 124 --ISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRN 180
                              + + L +A      G  +IVK +L       V   D  G  
Sbjct: 60  ADPQLLG----------KGRESALSLAC---SKGYTDIVKMLLDC--GVDVNEYDWNGGT 104

Query: 181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRK------IDYNGNTIFHMA 222
            L  A+    ++     V+M      L+           +G     +A
Sbjct: 105 PLLYAVHGNHVK----CVKM------LLESGADPTIETDSGYNSMDLA 142

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 45.0 bits (108), Expect = 7e-06
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 25/140 (17%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
           ++ +G T LH  A + H L +  +VL K    +   ++ G T L  AA +G ++I   L 
Sbjct: 43  EDASGWTPLHLAAFNGH-LEIV-EVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVL- 99

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHID 175
             +  G D          N         LH+A     FG +EIV+ +L     A V   D
Sbjct: 100 --LKNGADV---------NANDMEGHTPLHLAA---MFGHLEIVEVLLKN--GADVNAQD 143

Query: 176 DEGRNILHVAIKYRQLEIFE 195
             G+    ++I     ++ E
Sbjct: 144 KFGKTAFDISIDNGNEDLAE 163

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 44.3 bits (106), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 50/140 (35%), Gaps = 33/140 (23%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLA 121
               L E A +         ++       G      + +G T L  AA  G ++I   L 
Sbjct: 14  LGKKLLEAARAGR-DDEVRILMAN-----GADVNAEDASGWTPLHLAAFNGHLEIVEVL- 66

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHID 175
             +  G D          N   +     L +A     FG +EIV+ +L     A V   D
Sbjct: 67  --LKNGAD---------VNAVDHAGMTPLRLAA---LFGHLEIVEVLLKN--GADVNAND 110

Query: 176 DEGRNILHVAIKYRQLEIFE 195
            EG   LH+A  +  LEI E
Sbjct: 111 MEGHTPLHLAAMFGHLEIVE 130

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 41.6 bits (99), Expect = 1e-04
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 19/102 (18%)

Query: 98  NNNGETALLRAARYGKVDIFNFLAGK---ISGYDHATRLPFLHRNDKTNVLHIAILSLHF 154
            ++    LL AAR G+ D    L      ++  D                LH+A      
Sbjct: 11  GSDLGKKLLEAARAGRDDEVRILMANGADVNAED----------ASGWTPLHLAA---FN 57

Query: 155 GCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
           G +EIV+ +L     A V  +D  G   L +A  +  LEI E
Sbjct: 58  GHLEIVEVLLKN--GADVNAVDHAGMTPLRLAALFGHLEIVE 97

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 45.1 bits (108), Expect = 8e-06
 Identities = 28/174 (16%), Positives = 60/174 (34%), Gaps = 33/174 (18%)

Query: 28  DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL 87
           D   +H      + D + + L     +  + + + ++ G T L   +     +    + L
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLR----KGDNLVNKPDERGFTPLIWASAFGE-IETV-RFL 55

Query: 88  RKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLAGK---ISGYDHATRLPFLHRND 140
            +     G    +     E+AL  A+  G  DI   L  +   I+ YD           +
Sbjct: 56  LEW----GADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD----------WN 101

Query: 141 KTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEI 193
               L  A+       ++ V+ +L+    A +    D G   + +A+     ++
Sbjct: 102 GGTPLLYAV---RGNHVKCVEALLAR--GADLTTEADSGYTPMDLAVALGYRKV 150

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 43.9 bits (105), Expect = 2e-05
 Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 30/164 (18%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS 125
            +  +H+ A     L    + LRK   L+   +  G T L+ A+ +G+++   FL     
Sbjct: 2   DSLSIHQLAAQGE-LDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-- 58

Query: 126 GYD-HATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV 184
           G D H          ++ + L +A  S   G  +IV  +L      +   D  G   L  
Sbjct: 59  GADPHIL------AKERESALSLA--STG-GYTDIVGLLLERDVD-INIYDWNGGTPLLY 108

Query: 185 AIKYRQLEIFERVVQMEIPLRRLVRK------IDYNGNTIFHMA 222
           A++   ++     V+       L+ +         +G T   +A
Sbjct: 109 AVRGNHVK----CVEA------LLARGADLTTEADSGYTPMDLA 142

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 44.7 bits (107), Expect = 8e-06
 Identities = 29/142 (20%), Positives = 44/142 (30%), Gaps = 31/142 (21%)

Query: 63  NKAGNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFN 118
           +  G + LH  A   H      +VL +A    G     R     T L  AA  G  +I  
Sbjct: 31  DWLGTSPLHLAAQYGH-FSTT-EVLLRA----GVSRDARTKVDRTPLHMAASEGHANIVE 84

Query: 119 FLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQAVEH 173
            L   +  G D          N K       LH A         E+V+ ++      V  
Sbjct: 85  VL---LKHGAD---------VNAKDMLKMTALHWAT---EHNHQEVVELLIKYGAD-VHT 128

Query: 174 IDDEGRNILHVAIKYRQLEIFE 195
                +    ++I     ++ E
Sbjct: 129 QSKFCKTAFDISIDNGNEDLAE 150

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 41.2 bits (98), Expect = 1e-04
 Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 32/139 (23%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLGM---RNNNGETALLRAARYGKVDIFNFLAG 122
               L E A +         ++       G     +  G + L  AA+YG       L  
Sbjct: 2   LGKKLLEAARAGQ-DDEVRILMAN-----GAPFTTDWLGTSPLHLAAQYGHFSTTEVL-- 53

Query: 123 KIS-GYDHATRLPFLHRNDKTNV----LHIAILSLHFGCIEIVKDILSVYPQA-VEHIDD 176
            +  G           R+ +T V    LH+A      G   IV+ +L     A V   D 
Sbjct: 54  -LRAGVS---------RDARTKVDRTPLHMAA---SEGHANIVEVLLKH--GADVNAKDM 98

Query: 177 EGRNILHVAIKYRQLEIFE 195
                LH A ++   E+ E
Sbjct: 99  LKMTALHWATEHNHQEVVE 117

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 38.9 bits (92), Expect = 8e-04
 Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 16/98 (16%)

Query: 100 NGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTNVLHIAILSLHFGCIE 158
           +    LL AAR G+ D    L   ++ G    T          T+ LH+A     +G   
Sbjct: 1   DLGKKLLEAARAGQDDEVRIL---MANGAPFTT------DWLGTSPLHLAA---QYGHFS 48

Query: 159 IVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
             + +L        +      R  LH+A       I E
Sbjct: 49  TTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVE 84

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 44.7 bits (107), Expect = 1e-05
 Identities = 30/176 (17%), Positives = 58/176 (32%), Gaps = 37/176 (21%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVL-- 87
             +        +  V   LD     + + + + +  G + LH          V  ++L  
Sbjct: 7   DDIFTQCREGNAVAVRLWLD----NTENDLNQGDDHGFSPLHWACREGR-SAVV-EMLIM 60

Query: 88  RKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR---NDKTN- 143
           R A   + + N   +T L  AA +G  DI   L   +            ++   N     
Sbjct: 61  RGAR--INVMNRGDDTPLHLAASHGHRDIVQKL---LQ-----------YKADINAVNEH 104

Query: 144 ---VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
               LH A     +G  ++ +D+++    A V   +  G   +  A    +  + E
Sbjct: 105 GNVPLHYAC---FWGQDQVAEDLVAN--GALVSICNKYGEMPVDKAKAPLRELLRE 155

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 43.2 bits (103), Expect = 4e-05
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 26/172 (15%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS 125
               +       +        L      L   +++G + L  A R G+  +   L   I 
Sbjct: 5   FMDDIFTQCREGN-AVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEML---IM 60

Query: 126 GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRN 180
                 R+     N         LH+A      G  +IV+ +L    +A +  +++ G  
Sbjct: 61  ---RGARI-----NVMNRGDDTPLHLAA---SHGHRDIVQKLLQY--KADINAVNEHGNV 107

Query: 181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE 232
            LH A  + Q +    V +  +    LV   +  G      A    ++ + E
Sbjct: 108 PLHYACFWGQDQ----VAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRE 155

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 42.8 bits (102), Expect = 5e-05
 Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 24/140 (17%)

Query: 98  NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV----LHIAILSLH 153
           +      +    R G           +   +    L     N   +     LH A     
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLW---LD--NTENDL-----NQGDDHGFSPLHWAC---R 48

Query: 154 FGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKID 212
            G   +V+ ++     A +  ++      LH+A  +   +I    VQ  +  +  +  ++
Sbjct: 49  EGRSAVVEMLIMR--GARINVMNRGDDTPLHLAASHGHRDI----VQKLLQYKADINAVN 102

Query: 213 YNGNTIFHMAGIKRKDYVAE 232
            +GN   H A    +D VAE
Sbjct: 103 EHGNVPLHYACFWGQDQVAE 122

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 26/170 (15%), Positives = 47/170 (27%), Gaps = 32/170 (18%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           +  + A       LV  LL+    +               LH+ AT      V  K+L  
Sbjct: 33  SASYYAIADNNVRLVCTLLNAGALK-------NLLENEFPLHQAATLEDTKIV--KILLF 83

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----- 143
           +       ++ G TAL  A   G +         +   +                     
Sbjct: 84  SGLDDSQFDDKGNTALYYAVDSGNMQTVKLF---VKKNWRL---------MFYGKTGWKT 131

Query: 144 VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEI 193
             + A+       + IV   LS              + +H+ IK   +++
Sbjct: 132 SFYHAV---MLNDVSIVSYFLSE--IPSTFDLAILLSCIHITIKNGHVDM 176

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 23/104 (22%)

Query: 97  RNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR---NDKTN--VLHIAILS 151
            + +G +A   A     V +   L   ++                N   N   LH A   
Sbjct: 27  ADVHGHSASYYAIADNNVRLVCTL---LN-----------AGALKNLLENEFPLHQAA-- 70

Query: 152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195
                 +IVK +L          DD+G   L+ A+    ++  +
Sbjct: 71  -TLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVK 112

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 28/201 (13%), Positives = 53/201 (26%), Gaps = 44/201 (21%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDK---MTRQNKAG-NTILHETATSNHALPVADK 85
           T L+ A  +      +KL        + K   +    K G  T  +     N  + +   
Sbjct: 97  TALYYAVDSGNMQ-TVKLF-------VKKNWRLMFYGKTGWKTSFYHAVMLND-VSIVSY 147

Query: 86  VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTNV 144
            L + P           + +    + G VD+   L   +       T     +       
Sbjct: 148 FLSEIPST--FDLAILLSCIHITIKNGHVDMMILL---LDYMTSTNTN----NSLLFIPD 198

Query: 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNI---LHVAIKYRQLEIFERVVQME 201
           + +AI       IE+++ +                NI       +     EI     +M 
Sbjct: 199 IKLAI---DNKDIEMLQALFK-----------YDINIYSANLENVLLDDAEI----AKMI 240

Query: 202 IPLRRLVRKIDYNGNTIFHMA 222
           I      +   Y  +      
Sbjct: 241 IEKHVEYKSDSYTKDLDIVKN 261

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 42.8 bits (102), Expect = 3e-05
 Identities = 27/140 (19%), Positives = 45/140 (32%), Gaps = 33/140 (23%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLA 121
               L E A +         ++       G     ++  G T L  A  +G ++I   L 
Sbjct: 14  LGKKLLEAARAGQ-DDEVRILMAN-----GADVNAKDEYGLTPLYLATAHGHLEIVEVL- 66

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHID 175
             +  G D          N         LH+A      G +EI + +L     A V   D
Sbjct: 67  --LKNGAD---------VNAVDAIGFTPLHLAA---FIGHLEIAEVLLKH--GADVNAQD 110

Query: 176 DEGRNILHVAIKYRQLEIFE 195
             G+    ++I     ++ E
Sbjct: 111 KFGKTAFDISIGNGNEDLAE 130

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 42.4 bits (101), Expect = 4e-05
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 33/143 (23%)

Query: 63  NKAGNTILHETATSNHALPVADKVL--RKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           N  G T+LH  +     +P   + L    +     ++++ G T L  A  +G + +   L
Sbjct: 7   NHRGETLLHIASIKGD-IPSV-EYLLQNGSD--PNVKDHAGWTPLHEACNHGHLKVVELL 62

Query: 121 AGKISGYDHATRLPFLHR---NDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VE 172
              +            H+   N         LH A      G ++IVK +LS    A   
Sbjct: 63  ---LQ-----------HKALVNTTGYQNDSPLHDA---AKNGHVDIVKLLLSY--GASRN 103

Query: 173 HIDDEGRNILHVAIKYRQLEIFE 195
            ++  G   +          +  
Sbjct: 104 AVNIFGLRPVDYTDDESMKSLLL 126

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 40.9 bits (97), Expect = 1e-04
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 27/141 (19%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T+LH+A+       V  LL    D        ++ AG T LHE     H L V  ++L +
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGSD-----PNVKDHAGWTPLHEACNHGH-LKVV-ELLLQ 64

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----V 144
              L+       ++ L  AA+ G VDI   L   +S G           RN         
Sbjct: 65  HKALVNTTGYQNDSPLHDAAKNGHVDIVKLL---LSYGAS---------RNAVNIFGLRP 112

Query: 145 LHIAILSLHFGCIEIVKDILS 165
           +             ++     
Sbjct: 113 VDYTD---DESMKSLLLLPEK 130

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 40.1 bits (95), Expect = 3e-04
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 23/105 (21%)

Query: 97  RNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILS 151
            N+ GET L  A+  G +    +L   +  G D          N K +     LH A   
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYL---LQNGSD---------PNVKDHAGWTPLHEA--C 51

Query: 152 LHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
            H G +++V+ +L    +A V     +  + LH A K   ++I +
Sbjct: 52  NH-GHLKVVELLLQH--KALVNTTGYQNDSPLHDAAKNGHVDIVK 93

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 41.9 bits (100), Expect = 4e-05
 Identities = 43/138 (31%), Positives = 59/138 (42%), Gaps = 33/138 (23%)

Query: 66  GNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFNFLA 121
           G T LH  A + H L V  K+L +A    G     ++ NG T L  AAR G +++   L 
Sbjct: 2   GRTPLHLAARNGH-LEVV-KLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLL- 54

Query: 122 GKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQA-VEHID 175
             +  G D          N K       LH+A      G +E+VK +L     A V   D
Sbjct: 55  --LEAGAD---------VNAKDKNGRTPLHLAA---RNGHLEVVKLLLEA--GADVNAKD 98

Query: 176 DEGRNILHVAIKYRQLEI 193
             GR  LH+A +   LE+
Sbjct: 99  KNGRTPLHLAARNGHLEV 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 40.8 bits (97), Expect = 9e-05
 Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 23/105 (21%)

Query: 95  GMRNNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAI 149
           G   +  +   + A + G +D        ++ G D          N         LH A 
Sbjct: 1   GPLGSMCDKEFMWALKNGDLDEVKDY---VAKGED---------VNRTLEGGRKPLHYA- 47

Query: 150 LSLHFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEI 193
                G +EI++ +L     A +   D      L  A+    +  
Sbjct: 48  --ADCGQLEILEFLLLK--GADINAPDKHHITPLLSAVYEGHVSC 88

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 40.1 bits (95), Expect = 2e-04
 Identities = 22/149 (14%), Positives = 35/149 (23%), Gaps = 41/149 (27%)

Query: 61  RQNKAGNTILHETATSNHALPV--------ADKVLRKAPGLLGMRNNNGETALLRAARYG 112
                 +        +   L           D                G   L  AA  G
Sbjct: 2   PLGSMCDKEFMWALKNGD-LDEVKDYVAKGEDV---------NRTLEGGRKPLHYAADCG 51

Query: 113 KVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVY 167
           +++I  FL   +  G D          N         L  A+   + G +  VK +LS  
Sbjct: 52  QLEILEFL---LLKGAD---------INAPDKHHITPLLSAV---YEGHVSCVKLLLSK- 95

Query: 168 PQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
             A       +G              + +
Sbjct: 96  -GADKTVKGPDGLTAFEATDNQAIKALLQ 123

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 19  HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH 78
             L      D+T LH+A   +  D     + +   Q+   + +Q   G+T LH    +++
Sbjct: 160 IPLANGHEPDETALHLAV--RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217

Query: 79  ALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR 138
           A  +  K+L +    + + N +GET L  A R                      L     
Sbjct: 218 AECL--KLLLRGKASIEIANESGETPLDIAKRLKHEHC-------------EELLTQALS 262

Query: 139 NDKTNVLHIAI 149
               + +H+  
Sbjct: 263 GRFNSHVHVEY 273

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 40.4 bits (96), Expect = 1e-04
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 23/104 (22%)

Query: 98  NNNGETALLRAARYGKVDIFNFLAGKIS-GYDHATRLPFLHRNDKTN----VLHIAILSL 152
           + +G T L  AA+ G  +    L   +S G D          N ++      LH+A    
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKL---LSKGAD---------VNARSKDGNTPLHLAA--- 50

Query: 153 HFGCIEIVKDILSVYPQA-VEHIDDEGRNILHVAIKYRQLEIFE 195
             G  EIVK +L+    A V     +G    H+A K    EI +
Sbjct: 51  KNGHAEIVKLLLAK--GADVNARSKDGNTPEHLAKKNGHHEIVK 92

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 40.1 bits (95), Expect = 3e-04
 Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
              + +  L   A     +    + L +A       N  G   +      G   +   L 
Sbjct: 8   LGGSSDAGLATAAARGQ-VETV-RQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLL 64

Query: 122 GKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDEGRN 180
              +  + A           T  +H A      G ++ +  +      A ++  D  GR 
Sbjct: 65  LHGAEPNCADP------ATLTRPVHDAA---REGFLDTLVVLHRA--GARLDVCDAWGRL 113

Query: 181 ILHVAIKYRQLEI 193
            + +A +    +I
Sbjct: 114 PVDLAEEQGHRDI 126

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 15/160 (9%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
            +     +  Y    +   K L         K   +++    +   T  S+    +   +
Sbjct: 60  MEQVRQLLCLYYAHYNRNAKQLWSD----AHKKGIKSEVICFVAAITGCSSALDTL--CL 113

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLH 146
           L  +  ++ +       A   AA  G + + N L         A         +      
Sbjct: 114 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI----QAENYH-AFR 168

Query: 147 IAILSLHFGCIEIVKDILSVYPQAVEH-IDDEGRNILHVA 185
           +A  + + G + ++  +  + P      I  E       A
Sbjct: 169 LA--AEN-GHLHVLNRLCELAPTEATAMIQAENYYAFRWA 205

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 23/138 (16%)

Query: 63  NKAGNTILHETATSNHALPVADKVLRKAPGLLG----MRNNNGETALLRAARYGKVDIFN 118
            +     L   A     +     +L       G      N+ G   +      G   +  
Sbjct: 9   MEPSADWLATAAARGR-VEEVRALLEA-----GANPNAPNSYGRRPIQVMMM-GSARVAE 61

Query: 119 FLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQA-VEHIDDE 177
            L    +  + A           T  +H A      G ++ +  +      A ++  D  
Sbjct: 62  LLLLHGAEPNCAD------PATLTRPVHDAA---REGFLDTLVVLHRA--GARLDVRDAW 110

Query: 178 GRNILHVAIKYRQLEIFE 195
           GR  + +A +    ++  
Sbjct: 111 GRLPVDLAEELGHRDVAR 128

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 25/148 (16%), Positives = 38/148 (25%), Gaps = 42/148 (28%)

Query: 61  RQNKAGNTILHETATSNHALPV-------ADKVLRKAPGLLGMRNNNGETALLRAARYGK 113
           R    G           H+          AD              +  ET    AAR   
Sbjct: 9   RTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV------------VSEYETPWWTAARKAD 56

Query: 114 VDIFNFLAGKISGYDHATRLPFLHRNDKTN----VLHIAILSLHFGCIEIVKDILSVYPQ 169
               + L   +   D          +         L         G  + V+ +      
Sbjct: 57  EQALSQL---LEDRD---------VDAVDENGRTALLFVA---GLGSDKCVRLLAEA--G 99

Query: 170 A-VEHIDDE-GRNILHVAIKYRQLEIFE 195
           A ++H D   G   LH+A  Y + E+ E
Sbjct: 100 ADLDHRDMRGGLTALHMAAGYVRPEVVE 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	466
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.98
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.97
2rfa_A	232	Transient receptor potential cation channel subfa	99.97
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.97
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.97
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.97
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.97
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.97
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.97
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.97
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.97
2etb_A	256	Transient receptor potential cation channel subfam	99.96
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.96
2pnn_A	273	Transient receptor potential cation channel subfa	99.96
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.96
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.96
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.96
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.96
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.95
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.95
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.95
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.94
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.94
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.93
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.93
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.92
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.92
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.92
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.91
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.91
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.9
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.9
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.9
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.9
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.89
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.89
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.89
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.89
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.88
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.88
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.88
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.87
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.87
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.86
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.83
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.82
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.82
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.82
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.81
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.81
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.81
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.8
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.8
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.72
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.68

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=5e-39  Score=306.89  Aligned_cols=229  Identities=18%  Similarity=0.135  Sum_probs=187.7

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN  100 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~  100 (466)
                      ++..|.+|+||||+||+.|+.++|++|++.+++.  ..++.+|..|+||||+|+..|+. +++++|+++ +++++.+|..
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~   77 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH--EYLDLQNDLGQTALHLAAILGEA-STVEKLYAA-GAGVLVAERG   77 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS--GGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSSCCCTT
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc--ccccccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCC
Confidence            4668999999999999999999999999954331  23888999999999999999996 999999998 7889999999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCCC----------------------------------------CCCcccccccCC
Q 037168          101 GETALLRAARYGKVDIFNFLAGKISGYD----------------------------------------HATRLPFLHRND  140 (466)
Q Consensus       101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----------------------------------------~~~~~~~~~d~~  140 (466)
                      |+||||+|+..|+.+++++|++.+....                                        ..+.+++.+|..
T Consensus        78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (282)
T 1oy3_D           78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD  157 (282)
T ss_dssp             SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred             CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence            9999999999999999999998754211                                        012346778899


Q ss_pred             CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccC-CChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCch
Q 037168          141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE-GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIF  219 (466)
Q Consensus       141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL  219 (466)
                      |.||||   .|+..|+.++++.|++ .+.+++.++.. |+||||+|+.+|+.+++++|+++|++    ++.+|..|+|||
T Consensus       158 g~t~L~---~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpL  229 (282)
T 1oy3_D          158 GHTPLH---VAVIHKDAEMVRLLRD-AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD----PTARMYGGRTPL  229 (282)
T ss_dssp             SCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHH
T ss_pred             CcCHHH---HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----CcccccCCCCHH
Confidence            999999   7778999999999998 78899999865 99999999999999999999999998    999999999999


Q ss_pred             hhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhHH
Q 037168          220 HMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNE  280 (466)
Q Consensus       220 HlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~~  280 (466)
                      |+|++.++.++++.|                   +..+.+++.+|.+|.||++.+.....+
T Consensus       230 ~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~a~~~~~~  271 (282)
T 1oy3_D          230 GSALLRPNPILARLL-------------------RAHGAPEPEDGGDKLSPCSSSGSDSDS  271 (282)
T ss_dssp             HHHHTSSCHHHHHHH-------------------HHTTCCCCCCC----------------
T ss_pred             HHHHHcCCcHHHHHH-------------------HHcCCCcCcCCCcccccccccCCcccc
Confidence            999999999998777                   345666899999999999998876543

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=2.5e-38  Score=311.35  Aligned_cols=246  Identities=18%  Similarity=0.186  Sum_probs=211.2

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      +|+.+.+..++.+. +.+++..|..|.||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. ++
T Consensus        34 ~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~g~~-~i  106 (351)
T 3utm_A           34 SGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQ-----HGADVHAKDKGGLVPLHNACSYGHY-EV  106 (351)
T ss_dssp             HTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-HH
T ss_pred             cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCCCCCcHHHHHHHCCCH-HH
Confidence            68889999988875 57788899999999999999999999999999     5567889999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCC---C----------------------------
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHA---T----------------------------  131 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~---~----------------------------  131 (466)
                      +++|+++ +.+++.+|..|.||||+|+..|+.+++++|++++.+.+..   +                            
T Consensus       107 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~  185 (351)
T 3utm_A          107 TELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQA  185 (351)
T ss_dssp             HHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHH
Confidence            9999998 7889999999999999999999999999999985532210   0                            


Q ss_pred             ----------------cccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHH
Q 037168          132 ----------------RLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE  195 (466)
Q Consensus       132 ----------------~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~  195 (466)
                                      ......+..|.||||+|+.....+..++++.|++ .+.+++.+|..|+||||+|+.+|+.++++
T Consensus       186 ~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~  264 (351)
T 3utm_A          186 AREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMTPLHVAAERAHNDVME  264 (351)
T ss_dssp             HHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred             HHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHHcCCHHHHH
Confidence                            0111245678899995554433477999999998 89999999999999999999999999999


Q ss_pred             HHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHH
Q 037168          196 RVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFA  275 (466)
Q Consensus       196 ~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~  275 (466)
                      +|+++|++    +|.+|..|+||||+|++.++.++++.|                   +..+.+.+.+|.+|+||++++.
T Consensus       265 ~Ll~~ga~----~n~~d~~g~t~L~~A~~~~~~~~v~~L-------------------l~~gad~~~~~~~g~tal~~a~  321 (351)
T 3utm_A          265 VLHKHGAK----MNALDSLGQTALHRAALAGHLQTCRLL-------------------LSYGSDPSIISLQGFTAAQMGN  321 (351)
T ss_dssp             HHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHSC
T ss_pred             HHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHH-------------------HHcCCCCCCcCCCCCChhhhhh
Confidence            99999998    999999999999999999999998777                   2345567899999999999985


Q ss_pred             HHhHH
Q 037168          276 IANNE  280 (466)
Q Consensus       276 ~~~~~  280 (466)
                      +...+
T Consensus       322 ~~~~~  326 (351)
T 3utm_A          322 EAVQQ  326 (351)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54433

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=7.5e-38  Score=291.47  Aligned_cols=221  Identities=16%  Similarity=0.199  Sum_probs=201.4

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN   98 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d   98 (466)
                      .+++..|.+|.||||+|+..|+.+++++|++     .+.+++..|..|.||||+|+..|+. +++++|++. +.+++.+|
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~   74 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQ-----AGANIDTCSEDQRTPLMEAAENNHL-EAVKYLIKA-GALVDPKD   74 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHTT-TCCCCCCC
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHH-----cCCCcCccCCCCCCHHHHHHHhCCH-HHHHHHHhC-CCCCCCCC
Confidence            3567889999999999999999999999999     5566888999999999999999996 999999988 77899999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCC
Q 037168           99 NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG  178 (466)
Q Consensus        99 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G  178 (466)
                      ..|.||||+|+..|+.+++++|++.++      .+++.+|..|.||||   .|+..|+.++++.|++ .+.+++.+|..|
T Consensus        75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~------~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g  144 (237)
T 3b7b_A           75 AEGSTCLHLAAKKGHYEVVQYLLSNGQ------MDVNCQDDGGWTPMI---WATEYKHVDLVKLLLS-KGSDINIRDNEE  144 (237)
T ss_dssp             TTSCCHHHHHHHTTCHHHHHHHHTTTC------CCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTS
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCC------CCcccCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCccCCCC
Confidence            999999999999999999999999842      577888999999999   7778999999999999 899999999999


Q ss_pred             ChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccc
Q 037168          179 RNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPH  258 (466)
Q Consensus       179 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~  258 (466)
                      +||||+|+..|+.+++++|+++|++    ++.+|..|+||||+|++.++.++++.|                   +..+.
T Consensus       145 ~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga  201 (237)
T 3b7b_A          145 NICLHWAAFSGCVDIAEILLAAKCD----LHAVNIHGDSPLHIAARENRYDCVVLF-------------------LSRDS  201 (237)
T ss_dssp             CCHHHHHHHHCCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HTTTC
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHhCCHhHHHHH-------------------HHcCC
Confidence            9999999999999999999999998    899999999999999999999988666                   33455


Q ss_pred             ccccccCCCCChHHHHHHHhH
Q 037168          259 FLNHRNNMGFIPEELFAIANN  279 (466)
Q Consensus       259 ~~~~~n~~g~Tp~~l~~~~~~  279 (466)
                      +++.+|++|+||++++....+
T Consensus       202 d~~~~d~~g~t~l~~A~~~~~  222 (237)
T 3b7b_A          202 DVTLKNKEGETPLQCASLNSQ  222 (237)
T ss_dssp             CTTCCCTTSCCHHHHSCTTCH
T ss_pred             CCCccCCCCCCHHHHHHHHHH
Confidence            678999999999999977654

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.3e-38  Score=301.13  Aligned_cols=232  Identities=16%  Similarity=0.116  Sum_probs=193.1

Q ss_pred             CccchHHHHHHHHhCCC---------ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHH
Q 037168            2 IKQDEQKVIELCRKVPD---------HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHE   72 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~---------~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~   72 (466)
                      ++|+.+++.+++...++         ...+..|.+|+||||+||..|+.++++.|++     .+.+++.+|.+|+||||+
T Consensus        24 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~   98 (285)
T 3d9h_A           24 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLIS-----QGWAVNIITADHVSPLHE   98 (285)
T ss_dssp             ------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHH-----TTCCSCEECTTCCCHHHH
T ss_pred             hcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCCHHHH
Confidence            57888888887665422         3366789999999999999999999999999     456688999999999999


Q ss_pred             HHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHh
Q 037168           73 TATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSL  152 (466)
Q Consensus        73 Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~  152 (466)
                      |+..|+. +++++|++. +.+++.+|.+|+||||+|+..|+.+++++|++.+       .+++. +.+|.||||   .|+
T Consensus        99 A~~~g~~-~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------~~~~~-~~~g~t~L~---~A~  165 (285)
T 3d9h_A           99 ACLGGHL-SCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG-------ASVQP-ESDLASPIH---EAA  165 (285)
T ss_dssp             HHHTTCH-HHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-------CCSSC-SCTTSCHHH---HHH
T ss_pred             HHHCCcH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCC-------CCCCC-CCCCCCHHH---HHH
Confidence            9999996 999999998 7889999999999999999999999999999983       44443 345999999   777


Q ss_pred             hcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhh
Q 037168          153 HFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE  232 (466)
Q Consensus       153 ~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~  232 (466)
                      ..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++ +|..|+||||+|++.++.++++
T Consensus       166 ~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~-~~~~g~t~L~~A~~~~~~~~v~  239 (285)
T 3d9h_A          166 RRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD----VN-QGKGQDSPLHAVVRTASEELAC  239 (285)
T ss_dssp             HHTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC----TT-CCBTTBCHHHHHHHTTCHHHHH
T ss_pred             HcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC----CC-CCCCCCCHHHHHHHcCCHHHHH
Confidence            8899999999998 8899999999999999999999999999999999998    66 4899999999999999999886


Q ss_pred             ccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHH
Q 037168          233 KMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAI  276 (466)
Q Consensus       233 ~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~  276 (466)
                      .|                   +..+.+++.+|.+|+||++++.+
T Consensus       240 ~L-------------------l~~gad~~~~d~~g~t~l~~A~~  264 (285)
T 3d9h_A          240 LL-------------------MDFGADTQAKNAEGKRPVELVPP  264 (285)
T ss_dssp             HH-------------------HHTTCCTTCCCTTSCCGGGGSCT
T ss_pred             HH-------------------HHCCCCCCCcCCCCCCHHHHhcC
Confidence            66                   22355678999999999999974

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=2.9e-38  Score=297.88  Aligned_cols=219  Identities=16%  Similarity=0.181  Sum_probs=165.0

Q ss_pred             cccccCCCCCcHHHHHHHcC-------------CHHHHHHHHHhCCCCchhhh-hccCCCCChHHHHHHHcCCcHHHHHH
Q 037168           20 ALYVFTIHDDTVLHMATYTK-------------KSDLVIKLLDELPDQSLDKM-TRQNKAGNTILHETATSNHALPVADK   85 (466)
Q Consensus        20 ~~~~~~~~g~T~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~-~~~d~~G~TpLh~Aa~~g~~~~~v~~   85 (466)
                      +++.+|.+|.||||+|+..|             +.++++.|++.++     ++ +..|..|.||||+|+..|+. ++++.
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~-----~~~~~~d~~g~t~L~~A~~~g~~-~~v~~   75 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA-----SLHNQTDRTGETALHLAARYSRS-DAAKR   75 (253)
T ss_dssp             -------------------------------------------------------CCCTTSCCHHHHHHHTTCH-HHHHH
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC-----CcccccCCCCCcHHHHHHHcCCH-HHHHH
Confidence            46778999999999999987             8999999999543     34 44689999999999999996 99999


Q ss_pred             HHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168           86 VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus        86 Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      |++. +.+++.+|..|+||||+|+..|+.+++++|++.+.      .+++.+|.+|.||||   .|+..|+.++++.|++
T Consensus        76 Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~------~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~  145 (253)
T 1yyh_A           76 LLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA------TDLDARMHDGTTPLI---LAARLAVEGMLEDLIN  145 (253)
T ss_dssp             HHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT------SCTTCCCTTCCCHHH---HHHHHTCSSHHHHHHH
T ss_pred             HHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCccccCCCCCcHHH---HHHHcChHHHHHHHHH
Confidence            9998 77899999999999999999999999999999832      367888999999999   6678899999999998


Q ss_pred             HCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHh
Q 037168          166 VYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDEL  245 (466)
Q Consensus       166 ~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~  245 (466)
                       .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|++.++.++++.|           
T Consensus       146 -~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpL~~A~~~~~~~~v~~L-----------  209 (253)
T 1yyh_A          146 -SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN----KDMQNNREETPLFLAAREGSYETAKVL-----------  209 (253)
T ss_dssp             -TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH-----------
T ss_pred             -cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHCCCHHHHHHH-----------
Confidence             8999999999999999999999999999999999998    899999999999999999999988766           


Q ss_pred             hHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          246 LWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       246 ~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                              +..+.+.+.+|..|+||++++.+..
T Consensus       210 --------l~~ga~~~~~d~~g~tpl~~A~~~g  234 (253)
T 1yyh_A          210 --------LDHFANRDITDHMDRLPRDIAQERM  234 (253)
T ss_dssp             --------HHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             --------HHcCCCccccccCCCCHHHHHHHcC
Confidence                    2334567889999999999998764

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=6.7e-38  Score=292.24  Aligned_cols=225  Identities=18%  Similarity=0.134  Sum_probs=194.8

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN  100 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~  100 (466)
                      .+..|.+|+||||+||+.|+.++++.|++...+ .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~   78 (241)
T 1k1a_A            2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLP-SVVRLLVTA-GASPMALDRH   78 (241)
T ss_dssp             -----CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTT
T ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccCCC
Confidence            356799999999999999999999999973221 3457888999999999999999996 999999997 7789999999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc-cCCC
Q 037168          101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID-DEGR  179 (466)
Q Consensus       101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~  179 (466)
                      |+||||+|+..|+.+++++|++.+...   ..+++.+|..|.||||   .|+..|+.++++.|++ .+.+++..| ..|+
T Consensus        79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~  151 (241)
T 1k1a_A           79 GQTAAHLACEHRSPTCLRALLDSAAPG---TLDLEARNYDGLTALH---VAVNTECQETVQLLLE-RGADIDAVDIKSGR  151 (241)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHHSCTT---SCCTTCCCTTSCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTTCC
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCc---cccccccCcCCCcHHH---HHHHcCCHHHHHHHHH-cCCCcccccccCCC
Confidence            999999999999999999999984411   2367788899999999   6778899999999999 788999998 8899


Q ss_pred             hHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccc
Q 037168          180 NILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHF  259 (466)
Q Consensus       180 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~  259 (466)
                      ||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..++.++++.|                   +..+.+
T Consensus       152 t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~  208 (241)
T 1k1a_A          152 SPLIHAVENNSLSMVQLLLQHGAN----VNAQMYSGSSALHSASGRGLLPLVRTL-------------------VRSGAD  208 (241)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHHTCHHHHHHH-------------------HHTTCC
T ss_pred             cHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH-------------------HhcCCC
Confidence            999999999999999999999998    899999999999999999999988666                   234556


Q ss_pred             cccccCCCCChHHHHHHHh
Q 037168          260 LNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       260 ~~~~n~~g~Tp~~l~~~~~  278 (466)
                      ++.+|.+|+||++++.+..
T Consensus       209 ~~~~~~~g~tpl~~A~~~~  227 (241)
T 1k1a_A          209 SSLKNCHNDTPLMVARSRR  227 (241)
T ss_dssp             TTCCCTTSCCTTTTCSSHH
T ss_pred             CCCcCCCCCCHHHHHHhcC
Confidence            7889999999999987643

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=6.8e-37  Score=291.93  Aligned_cols=235  Identities=22%  Similarity=0.151  Sum_probs=208.2

Q ss_pred             ccchHHHHHHHHhCCCcccccc-CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVF-TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      +|+.+.+..++.++  .+++.. +..|.||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. +
T Consensus        15 ~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~   86 (285)
T 1wdy_A           15 NEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLR-----HGADPVLRKKNGATPFLLAAIAGSV-K   86 (285)
T ss_dssp             TTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHTCH-H
T ss_pred             cCCHHHHHHHHHcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHcCCH-H
Confidence            57888888888776  445555 8889999999999999999999999     4566888999999999999999996 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccc----------cCCCCChhhHHHHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLH----------RNDKTNVLHIAILS  151 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~----------d~~g~TpLh~A~~a  151 (466)
                      ++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+.       +++.+          +..|.||||   .|
T Consensus        87 ~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------~~~~~~~~~~~~~~~~~~g~t~L~---~A  155 (285)
T 1wdy_A           87 LLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA-------NVNLRRKTKEDQERLRKGGATALM---DA  155 (285)
T ss_dssp             HHHHHHHT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCCCCHHHHHTTCCCCCHHH---HH
T ss_pred             HHHHHHHc-CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCC-------CcccccccHHHHHhhccCCCcHHH---HH
Confidence            99999998 77899999999999999999999999999999844       44444          788999999   77


Q ss_pred             hhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCC----hhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ----LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       152 ~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      +..|+.++++.|++..+.+++.+|..|+||||+|+..++    .+++++|+++|++    ++.+|..|+||||+|++.++
T Consensus       156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~  231 (285)
T 1wdy_A          156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVRGERGKTPLILAVEKKH  231 (285)
T ss_dssp             HHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC----SSCCCTTSCCHHHHHHHTTC
T ss_pred             HHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC----CCCcCCCCCcHHHHHHHcCC
Confidence            788999999999996799999999999999999999999    8999999999998    89999999999999999999


Q ss_pred             chhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          228 DYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       228 ~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      .++++.|..                  ..+.+++.+|.+|+||++++.+..
T Consensus       232 ~~~v~~Ll~------------------~~g~~~~~~~~~g~t~l~~A~~~~  264 (285)
T 1wdy_A          232 LGLVQRLLE------------------QEHIEINDTDSDGKTALLLAVELK  264 (285)
T ss_dssp             HHHHHHHHH------------------SSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHHh------------------ccCCCccccCCCCCcHHHHHHHcC
Confidence            988866611                  145567899999999999998754

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=8e-38  Score=297.75  Aligned_cols=220  Identities=18%  Similarity=0.128  Sum_probs=159.1

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc---hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQS---LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNN   99 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~   99 (466)
                      +.|.++.+|||.||+.|+.++|++||+.+.+..   ...++..|..|.||||.|+..++...+++.|++. |+++|.+|.
T Consensus         6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~~d~   84 (269)
T 4b93_B            6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNVTSQ   84 (269)
T ss_dssp             -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------C-CCCTTCCCT
T ss_pred             ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCCcCC
Confidence            457778899999999999999999998665421   2346677888999999999888765677777776 788999999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168          100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR  179 (466)
Q Consensus       100 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~  179 (466)
                      +|+||||+|+..|+.+++++|++.       +++++.++.+|.||+|   .++..++.++++.|++ .+.+++.+|..|+
T Consensus        85 ~G~TpLh~A~~~g~~~~v~~Ll~~-------~a~~~~~~~~g~t~l~---~a~~~~~~~~~~~Ll~-~g~~~n~~d~~g~  153 (269)
T 4b93_B           85 DGSSPLHVAALHGRADLIPLLLKH-------GANAGARNADQAVPLH---LACQQGHFQVVKCLLD-SNAKPNKKDLSGN  153 (269)
T ss_dssp             TSCCHHHHHHHTTCTTHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCSCCCCTTCC
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHhc-------CCCcCccCCCCCCccc---cccccChHHHHHHHHH-CCCCCCCCCCCCC
Confidence            999999999999999999999988       6678888889999999   6778899999999998 7889999999999


Q ss_pred             hHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccc
Q 037168          180 NILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHF  259 (466)
Q Consensus       180 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~  259 (466)
                      ||||+|+.+|+.+++++|+++|++    +|.+|..|+||||+|+..|+.+++++|                   +..+.+
T Consensus       154 TpL~~A~~~g~~~~v~~Ll~~gad----vn~~~~~g~t~Lh~A~~~g~~~~v~~L-------------------l~~Gad  210 (269)
T 4b93_B          154 TPLIYACSGGHHELVALLLQHGAS----INASNNKGNTALHEAVIEKHVFVVELL-------------------LLHGAS  210 (269)
T ss_dssp             CHHHHHHHTTCGGGHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH-------------------HHTTCC
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCC----CCccccCCCcHHHHHHHcCCHHHHHHH-------------------HHCCCC
Confidence            999999999999999999999988    889999999999999999998888666                   234556


Q ss_pred             cccccCCCCChHHHHHHH
Q 037168          260 LNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       260 ~~~~n~~g~Tp~~l~~~~  277 (466)
                      ++.+|++|+||+++|.+.
T Consensus       211 ~~~~d~~G~TpL~~A~~~  228 (269)
T 4b93_B          211 VQVLNKRQRTAVDCAEQN  228 (269)
T ss_dssp             SCCCCTTSCCSGGGSCTT
T ss_pred             CCCcCCCCCCHHHHHHhC
Confidence            788999999999988643

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=9.8e-37  Score=282.77  Aligned_cols=210  Identities=20%  Similarity=0.145  Sum_probs=194.2

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++.+.+ ...+..|.+|.||||+|+..|+.+++++|++     .+.+++.+|..|+||||+|+..|+. ++
T Consensus        16 ~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~   88 (231)
T 3aji_A           16 SGKLDELKERILADK-SLATRTDQDSRTALHWACSAGHTEIVEFLLQ-----LGVPVNDKDDAGWSPLHIAASAGXD-EI   88 (231)
T ss_dssp             HTCHHHHHHHHHHCG-GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHHTCH-HH
T ss_pred             hCCHHHHHHHHHhch-hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHH-----hCCCCCCcCCCCCCHHHHHHHcCHH-HH
Confidence            688999999999874 4578889999999999999999999999999     4566888999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD  162 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~  162 (466)
                      +++|+++ +.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|..|.||||   .|+..|+.++++.
T Consensus        89 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~  157 (231)
T 3aji_A           89 VKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-------GANPDAKDHYDATAMH---RAAAKGNLKMVHI  157 (231)
T ss_dssp             HHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHTCHHHHHH
T ss_pred             HHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCcHHH---HHHHcCCHHHHHH
Confidence            9999998 778999999999999999999999999999998       6678889999999999   6778899999999


Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccC
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      |++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|+..++.++.++|.
T Consensus       158 Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~lL~  225 (231)
T 3aji_A          158 LLF-YKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS----IYIENKEEKTPLQVAKGGLGLILKRLAE  225 (231)
T ss_dssp             HHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred             HHh-cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence            998 8999999999999999999999999999999999998    8999999999999999988888876663

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=2.5e-36  Score=279.99  Aligned_cols=215  Identities=18%  Similarity=0.115  Sum_probs=195.2

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      +..++||||.|++.|+.+.++.|++..    +..++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||
T Consensus         3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~   76 (231)
T 3aji_A            3 GCVSNIMICNLAYSGKLDELKERILAD----KSLATRTDQDSRTALHWACSAGHT-EIVEFLLQL-GVPVNDKDDAGWSP   76 (231)
T ss_dssp             CCCSSSHHHHHHHHTCHHHHHHHHHHC----GGGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSCCCCTTSCCH
T ss_pred             CccccchHHHHHHhCCHHHHHHHHHhc----hhhhhcCCCCCCCHHHHHHHcCcH-HHHHHHHHh-CCCCCCcCCCCCCH
Confidence            346889999999999999999999964    345788899999999999999996 999999998 77899999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV  184 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~  184 (466)
                      ||+|+..|+.+++++|++.       +.+++.+|.+|.||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+
T Consensus        77 L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~  145 (231)
T 3aji_A           77 LHIAASAGXDEIVKALLVK-------GAHVNAVNQNGCTPLH---YAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHR  145 (231)
T ss_dssp             HHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred             HHHHHHcCHHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHH
Confidence            9999999999999999998       6678889999999999   7778999999999998 889999999999999999


Q ss_pred             HHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccccccccc
Q 037168          185 AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRN  264 (466)
Q Consensus       185 A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n  264 (466)
                      |+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..++.++++.|                   +..+.+++.+|
T Consensus       146 A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~  202 (231)
T 3aji_A          146 AAAKGNLKMVHILLFYKAS----TNIQDTEGNTPLHLACDEERVEEAKFL-------------------VTQGASIYIEN  202 (231)
T ss_dssp             HHHHTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCC
T ss_pred             HHHcCCHHHHHHHHhcCCC----ccccCCCCCCHHHHHHHCCCHHHHHHH-------------------HHCCCCCCCCC
Confidence            9999999999999999998    899999999999999999999888666                   22355678999


Q ss_pred             CCCCChHHHHHHHhH
Q 037168          265 NMGFIPEELFAIANN  279 (466)
Q Consensus       265 ~~g~Tp~~l~~~~~~  279 (466)
                      .+|+||++++.+.+.
T Consensus       203 ~~g~t~l~~A~~~~~  217 (231)
T 3aji_A          203 KEEKTPLQVAKGGLG  217 (231)
T ss_dssp             TTSCCHHHHSCHHHH
T ss_pred             CCCCCHHHHHHhhHH
Confidence            999999999876543

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=3.1e-37  Score=297.57  Aligned_cols=238  Identities=18%  Similarity=0.185  Sum_probs=205.6

Q ss_pred             ccchHHHHHHHHhCCCcc-------ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHH
Q 037168            3 KQDEQKVIELCRKVPDHA-------LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETAT   75 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~-------~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~   75 (466)
                      +|..+.+..++.+.....       ....+.+|.||||.||..|+.++|+.|++.     +.+++..|..|.||||+|+.
T Consensus         8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~   82 (299)
T 1s70_B            8 QKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-----GADINYANVDGLTALHQACI   82 (299)
T ss_dssp             HHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-----CCCTTCBCTTCCBHHHHHHH
T ss_pred             HHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHH
Confidence            356678888888764322       223355688999999999999999999994     45688899999999999999


Q ss_pred             cCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcC
Q 037168           76 SNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG  155 (466)
Q Consensus        76 ~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g  155 (466)
                      .|+. +++++|++. +.+++.+|..|+||||+|+..|+.+++++|+++       +.+++.+|.+|.||||   .|+..+
T Consensus        83 ~g~~-~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-------g~~~~~~~~~g~t~l~---~A~~~~  150 (299)
T 1s70_B           83 DDNV-DMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQ-------GAHVGAVNSEGDTPLD---IAEEEA  150 (299)
T ss_dssp             TTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HCCSHH
T ss_pred             cCCH-HHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-------CCCCCCcCCCCCCHHH---HHHhcc
Confidence            9996 999999997 788999999999999999999999999999998       6788889999999999   777889


Q ss_pred             cHHHHHHHHHHCCCcccc--------------------------cccCCChHHHHHHHcCChhHHHHHHhcCcccccccc
Q 037168          156 CIEIVKDILSVYPQAVEH--------------------------IDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVR  209 (466)
Q Consensus       156 ~~~~v~~Ll~~~~~~~~~--------------------------~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~  209 (466)
                      +.++++.++...+.+++.                          .|..|+||||+|+.+|+.+++++|+++|++    +|
T Consensus       151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d----~~  226 (299)
T 1s70_B          151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD----VN  226 (299)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC----TT
T ss_pred             hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC----CC
Confidence            999999888766665543                          567899999999999999999999999998    99


Q ss_pred             cccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhHH
Q 037168          210 KIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNE  280 (466)
Q Consensus       210 ~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~~  280 (466)
                      .+|.+|+||||+|+..++.++++.|                   +..+.+++.+|.+|+||++++.+...+
T Consensus       227 ~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~gad~~~~d~~g~t~l~~A~~~~~~  278 (299)
T 1s70_B          227 IKDYDGWTPLHAAAHWGKEEACRIL-------------------VENLCDMEAVNKVGQTAFDVADEDILG  278 (299)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCTTTSCCSGGGH
T ss_pred             CcCCCCCcHHHHHHhcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999988766                   233556789999999999999765433

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1.7e-36  Score=280.44  Aligned_cols=213  Identities=18%  Similarity=0.129  Sum_probs=181.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCC-CcccC-cCCCCChHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP-GLLGM-RNNNGETAL  105 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~-~~~~~-~d~~G~tpL  105 (466)
                      |+||||.||+.|+.++++.|++.++    ...+.+|..|.||||+|+..|+. +++++|++.+. .+++. +|..|+|||
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~~~g~t~L   76 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKP----SLLLQKDQDGRIPLHWSVSFQAH-EITSFLLSKMENVNLDDYPDDSGWTPF   76 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCG----GGTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTCTTCCGGGCCCTTSCCHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCc----cccccCCCCCCCHHHHHHHcCCH-HHHHHHHhccccccccccCCCCCCCHH
Confidence            7899999999999999999999643    23455889999999999999996 99999999841 44555 889999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA  185 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A  185 (466)
                      |+|+..|+.+++++|++.+.     +.+++.+|.+|.||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|
T Consensus        77 ~~A~~~~~~~~~~~Ll~~g~-----~~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A  147 (228)
T 2dzn_A           77 HIACSVGNLEVVKSLYDRPL-----KPDLNKITNQGVTCLH---LAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRA  147 (228)
T ss_dssp             HHHHHHCCHHHHHHHHSSSS-----CCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHH
T ss_pred             HHHHHcCCHHHHHHHHhCCC-----CcccccCCcCCCCHHH---HHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHH
Confidence            99999999999999998842     2677788899999999   6778899999999998 7899999999999999999


Q ss_pred             HHcCChhHHHHHHhcC-cccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccccccccc
Q 037168          186 IKYRQLEIFERVVQME-IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRN  264 (466)
Q Consensus       186 ~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n  264 (466)
                      +.+|+.+++++|++.| ++    ++.+|.+|+||||+|+..++.++++.|.                  ...+.+++.+|
T Consensus       148 ~~~~~~~~v~~Ll~~g~~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll------------------~~~ga~~~~~~  205 (228)
T 2dzn_A          148 ASVGSLKLIELLCGLGKSA----VNWQDKQGWTPLFHALAEGHGDAAVLLV------------------EKYGAEYDLVD  205 (228)
T ss_dssp             HHTTCHHHHHHHHTTTCCC----SCCCCTTSCCHHHHHHHTTCHHHHHHHH------------------HHHCCCSCCBC
T ss_pred             HHcCCHHHHHHHHhcCccc----ccCcCCCCCCHHHHHHHcCCHHHHHHHH------------------HhcCCCCCccC
Confidence            9999999999999998 77    8899999999999999999988886661                  02355678899


Q ss_pred             CCCCChHHHHHH
Q 037168          265 NMGFIPEELFAI  276 (466)
Q Consensus       265 ~~g~Tp~~l~~~  276 (466)
                      .+|+||++++.+
T Consensus       206 ~~g~t~l~~A~~  217 (228)
T 2dzn_A          206 NKGAKAEDVALN  217 (228)
T ss_dssp             TTSCBGGGGCSS
T ss_pred             CCCCcHHHHHHH
Confidence            999999999854

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=1.3e-36  Score=286.55  Aligned_cols=208  Identities=15%  Similarity=0.128  Sum_probs=180.6

Q ss_pred             chHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHH
Q 037168            5 DEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVAD   84 (466)
Q Consensus         5 ~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~   84 (466)
                      +.+.+..++..+ ....+..|.+|.||||+|+..|+.++++.|++     .+.+++.+|..|.||||+|+..|+. ++++
T Consensus        35 ~~~~v~~Ll~~g-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~  107 (253)
T 1yyh_A           35 APAVISDFIYQG-ASLHNQTDRTGETALHLAARYSRSDAAKRLLE-----ASADANIQDNMGRTPLHAAVSADAQ-GVFQ  107 (253)
T ss_dssp             ------------------CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HHHH
T ss_pred             ChHHHHHHHHcc-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCH-HHHH
Confidence            445555555554 33345668999999999999999999999999     5567889999999999999999996 9999


Q ss_pred             HHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHH
Q 037168           85 KVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDIL  164 (466)
Q Consensus        85 ~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll  164 (466)
                      +|++.++.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|+
T Consensus       108 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~v~~Ll  177 (253)
T 1yyh_A          108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-------HADVNAVDDLGKSALH---WAAAVNNVDAAVVLL  177 (253)
T ss_dssp             HHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-------TCCTTCBCTTSCBHHH---HHHHHTCHHHHHHHH
T ss_pred             HHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHH
Confidence            999997778999999999999999999999999999998       6788899999999999   677889999999999


Q ss_pred             HHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          165 SVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       165 ~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      + .+++++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|++.|+.++++++
T Consensus       178 ~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~g~~~i~~~l  242 (253)
T 1yyh_A          178 K-NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHDIVRLL  242 (253)
T ss_dssp             H-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             H-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC----ccccccCCCCHHHHHHHcCCHHHHHHH
Confidence            8 8999999999999999999999999999999999998    899999999999999999999998666

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=7.1e-36  Score=303.87  Aligned_cols=239  Identities=20%  Similarity=0.158  Sum_probs=133.0

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHH
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA   83 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v   83 (466)
                      |+.+.+..++...  ...+..+..|.||||+|+..|+.+++++|++.     +.+++..|..|.||||+|+..|+. +++
T Consensus       124 g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~-~~v  195 (437)
T 1n11_A          124 GHVETVLALLEKE--ASQACMTKKGFTPLHVAAKYGKVRVAELLLER-----DAHPNAAGKNGLTPLHVAVHHNNL-DIV  195 (437)
T ss_dssp             TCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCSSCCCHHHHHHHTTCH-HHH
T ss_pred             CCHHHHHHHHhCC--CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC-----CCCCCCCCCCCCCHHHHHHHcCCH-HHH
Confidence            4445555444443  33444555566666666666666666666652     333444555555555555555553 555


Q ss_pred             HHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCC--------------------------CCcccccc
Q 037168           84 DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDH--------------------------ATRLPFLH  137 (466)
Q Consensus        84 ~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~--------------------------~~~~~~~~  137 (466)
                      ++|+++ +..++.++.+|.||||+|+..|+.+++++|++.+...+.                          .+.+++.+
T Consensus       196 ~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~  274 (437)
T 1n11_A          196 KLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG  274 (437)
T ss_dssp             HHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred             HHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC
Confidence            555544 333444444555555555555555555555544110000                          03445555


Q ss_pred             cCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCC
Q 037168          138 RNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNT  217 (466)
Q Consensus       138 d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~T  217 (466)
                      |..|.||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    +|.+|..|+|
T Consensus       275 ~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~n~~~~~g~t  346 (437)
T 1n11_A          275 NKSGLTPLH---LVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD----VNAKTKLGYS  346 (437)
T ss_dssp             CTTCCCHHH---HHHHHTCHHHHHHHHH-HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC----TTCCCTTSCC
T ss_pred             CCCCCCHHH---HHHHcCCHHHHHHHHh-CCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC----CCCCCCCCCC
Confidence            555666666   4445566666666665 4555666666666666666666666666666666655    5666666666


Q ss_pred             chhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          218 IFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       218 pLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      |||+|++.++.++++.|                   +..+.+.+.+|.+|+||++++.+..
T Consensus       347 ~L~~A~~~g~~~iv~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~g  388 (437)
T 1n11_A          347 PLHQAAQQGHTDIVTLL-------------------LKNGASPNEVSSDGTTPLAIAKRLG  388 (437)
T ss_dssp             HHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred             HHHHHHHCChHHHHHHH-------------------HHCcCCCCCCCCCCCCHHHHHHHcC
Confidence            66666666666555444                   2245567888899999999887654

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=2.5e-36  Score=278.49  Aligned_cols=193  Identities=17%  Similarity=0.143  Sum_probs=180.8

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN  100 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~  100 (466)
                      .+..|.+|.||||+|++.|+.+++++|++     .+.+++.+|..|.||||+|+..|+. +++++|++.++.+++.+|..
T Consensus        18 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~   91 (223)
T 2f8y_A           18 HNQTDRTGETALHLAARYSRSDAAKRLLE-----ASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRATDLDARMHD   91 (223)
T ss_dssp             TCCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHBTTSCTTCCCTT
T ss_pred             ccccCCCCCchHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCC
Confidence            34558999999999999999999999999     4566888999999999999999996 99999999977789999999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCCh
Q 037168          101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRN  180 (466)
Q Consensus       101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t  180 (466)
                      |.||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+|
T Consensus        92 g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t  160 (223)
T 2f8y_A           92 GTTPLILAARLAVEGMLEDLINS-------HADVNAVDDLGKSALH---WAAAVNNVDAAVVLLK-NGANKDMQNNREET  160 (223)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCBCTTSCBHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCC
T ss_pred             CCcHHHHHHHhCcHHHHHHHHHc-------CCCCcCcCCCCCcHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCcC
Confidence            99999999999999999999998       6788889999999999   7778999999999999 79999999999999


Q ss_pred             HHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       181 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|++.++.++++.|
T Consensus       161 ~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~~L  210 (223)
T 2f8y_A          161 PLFLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHDIVRLL  210 (223)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC----CccccccCCCHHHHHHHhcchHHHHHH
Confidence            99999999999999999999998    899999999999999999999998776

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=2e-35  Score=274.99  Aligned_cols=206  Identities=18%  Similarity=0.237  Sum_probs=188.7

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+++..+.+|.||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. ++
T Consensus        21 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~   92 (237)
T 3b7b_A           21 AGHVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIK-----AGALVDPKDAEGSTCLHLAAKKGHY-EV   92 (237)
T ss_dssp             HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCCCCCCTTSCCHHHHHHHTTCH-HH
T ss_pred             cCcHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHh-----CCCCCCCCCCCCCcHHHHHHHcCCH-HH
Confidence            46777666666654  6788899999999999999999999999999     5566788999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD  162 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~  162 (466)
                      +++|++.++.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|.+|.||||   .|+..|+.++++.
T Consensus        93 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~  162 (237)
T 3b7b_A           93 VQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-------GSDINIRDNEENICLH---WAAFSGCVDIAEI  162 (237)
T ss_dssp             HHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHCCHHHHHH
T ss_pred             HHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCccCCCCCCHHH---HHHHCCCHHHHHH
Confidence            99999997788999999999999999999999999999998       6678889999999999   6778899999999


Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA  231 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~  231 (466)
                      |++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..++.+..
T Consensus       163 Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~~~~~~~  226 (237)
T 3b7b_A          163 LLA-AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD----VTLKNKEGETPLQCASLNSQVWSA  226 (237)
T ss_dssp             HHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTSCCHHHHSCTTCHHHHH
T ss_pred             HHH-cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC----CCccCCCCCCHHHHHHHHHHHHHH
Confidence            998 8899999999999999999999999999999999998    899999999999999999876544

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=2.8e-35  Score=274.44  Aligned_cols=211  Identities=18%  Similarity=0.114  Sum_probs=190.4

Q ss_pred             ccchHHHHHHHHh--CCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH
Q 037168            3 KQDEQKVIELCRK--VPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL   80 (466)
Q Consensus         3 ~g~~~~v~~ll~~--~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~   80 (466)
                      .|+.+.+..++..  ..+.+++..|..|.||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. 
T Consensus        19 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~l~~A~~~~~~-   92 (241)
T 1k1a_A           19 QGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT-----AGASPMALDRHGQTAAHLACEHRSP-   92 (241)
T ss_dssp             TTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-
T ss_pred             cCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHHHHHHHcCCH-
Confidence            5777777777762  1246788899999999999999999999999999     5566888999999999999999996 


Q ss_pred             HHHHHHHHhCC---CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCc
Q 037168           81 PVADKVLRKAP---GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGC  156 (466)
Q Consensus        81 ~~v~~Ll~~~~---~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~  156 (466)
                      ++++.|++..+   .+++.+|..|.||||+|+..|+.+++++|++.       +.+++.++ ..|.||||   .|+..|+
T Consensus        93 ~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~~g~t~L~---~A~~~~~  162 (241)
T 1k1a_A           93 TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-------GADIDAVDIKSGRSPLI---HAVENNS  162 (241)
T ss_dssp             HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTTCCCHHH---HHHHTTC
T ss_pred             HHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-------CCCcccccccCCCcHHH---HHHHcCC
Confidence            99999999954   27889999999999999999999999999998       56777777 78999999   7778999


Q ss_pred             HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          157 IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       157 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      .++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|+..++.++++.+
T Consensus       163 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~i~~~l  235 (241)
T 1k1a_A          163 LSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD----SSLKNCHNDTPLMVARSRRVIDILRGK  235 (241)
T ss_dssp             HHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred             HHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC----CCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence            999999999 7999999999999999999999999999999999998    899999999999999999999988766

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=7.7e-37  Score=284.83  Aligned_cols=225  Identities=17%  Similarity=0.239  Sum_probs=188.3

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCC
Q 037168           22 YVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNG  101 (466)
Q Consensus        22 ~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G  101 (466)
                      +.+|.+|+||||+|+..|+.++++.|++.++. .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|
T Consensus         2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g   78 (236)
T 1ikn_D            2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKG-DLAFLNFQNNLQQTPLHLAVITNQP-EIAEALLGA-GCDPELRDFRG   78 (236)
T ss_dssp             -----CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCH-HHHHCCCSC-CCCSCCCCTTC
T ss_pred             CcCCCCCCchhHHHHHcCChhHHHHHHHHhhc-cHHHhhccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCC
Confidence            35789999999999999999999999997654 3457899999999999999999996 999999987 78899999999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc-CCCh
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD-EGRN  180 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t  180 (466)
                      +||||+|+..|+.+++++|++.+..... ....+..|..|.||||   .|+..|+.++++.|++ .+.+++.+|. .|+|
T Consensus        79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t  153 (236)
T 1ikn_D           79 NTPLHLACEQGCLASVGVLTQSCTTPHL-HSILKATNYNGHTCLH---LASIHGYLGIVELLVS-LGADVNAQEPCNGRT  153 (236)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHSTTTTSS-SCGGGCCCTTCCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHhcccchhH-HHHhhccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCC
Confidence            9999999999999999999998542211 2335678889999999   7778999999999998 7899999998 9999


Q ss_pred             HHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccccc
Q 037168          181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFL  260 (466)
Q Consensus       181 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~  260 (466)
                      |||+|+..|+.+++++|+++|++    ++.+|..|+||||+|+..++.++++.|...+.                 ....
T Consensus       154 pL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga-----------------~~~~  212 (236)
T 1ikn_D          154 ALHLAVDLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL-----------------ENLQ  212 (236)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC-----------------GGGS
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHHHHHHcch-----------------hhhh
Confidence            99999999999999999999998    99999999999999999999999877632211                 1123


Q ss_pred             ccccCCCCChHHHHH
Q 037168          261 NHRNNMGFIPEELFA  275 (466)
Q Consensus       261 ~~~n~~g~Tp~~l~~  275 (466)
                      ..+|.+|+||.+...
T Consensus       213 ~~~~~~~~~~~~~~~  227 (236)
T 1ikn_D          213 MLPESEDEESYDTES  227 (236)
T ss_dssp             SCCCCCTTTCCCCC-
T ss_pred             cCCccchHHHHhhhc
Confidence            578889999987654

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=281.94  Aligned_cols=204  Identities=17%  Similarity=0.134  Sum_probs=158.5

Q ss_pred             CccchHHHHHHHHhCCC------ccccccCCCCCcHHHHHHHcCCH-HHHHHHHHhCCCCchhhhhccCCCCChHHHHHH
Q 037168            2 IKQDEQKVIELCRKVPD------HALYVFTIHDDTVLHMATYTKKS-DLVIKLLDELPDQSLDKMTRQNKAGNTILHETA   74 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~------~~~~~~~~~g~T~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa   74 (466)
                      .+|+.+.|..+++.+..      ...+..+..|.||||.|+..++. .+++.|++     .|++++.+|.+|+||||+|+
T Consensus        20 ~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~-----~Gadvn~~d~~G~TpLh~A~   94 (269)
T 4b93_B           20 ADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA-----SGLGVNVTSQDGSSPLHVAA   94 (269)
T ss_dssp             HTTCHHHHHHHHTCC---------------------------------------------CCCCTTCCCTTSCCHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHH
Confidence            36888888877765532      12566788899999999998876 47888998     56778999999999999999


Q ss_pred             HcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhc
Q 037168           75 TSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHF  154 (466)
Q Consensus        75 ~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~  154 (466)
                      ..|+. +++++|++. +++++.++.+|.||+|+|+..++.+++++|++.       +.+++.+|.+|+||||   .|+..
T Consensus        95 ~~g~~-~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-------g~~~n~~d~~g~TpL~---~A~~~  162 (269)
T 4b93_B           95 LHGRA-DLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDS-------NAKPNKKDLSGNTPLI---YACSG  162 (269)
T ss_dssp             HTTCT-THHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TCCSCCCCTTCCCHHH---HHHHT
T ss_pred             HcCcH-HHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHC
Confidence            99997 999999988 778999999999999999999999999999998       6788999999999999   77789


Q ss_pred             CcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       155 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      |+.++++.|++ .++++|.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+++++
T Consensus       163 g~~~~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~~~~  230 (269)
T 4b93_B          163 GHHELVALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS----VQVLNKRQRTAVDCAEQNSK  230 (269)
T ss_dssp             TCGGGHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCSGGGSCTTCH
T ss_pred             CCHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHhCCc
Confidence            99999999998 8999999999999999999999999999999999999    99999999999999998664

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=9.4e-35  Score=268.69  Aligned_cols=207  Identities=17%  Similarity=0.156  Sum_probs=185.4

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhc-cCCCCChHHHHHHHcCCcH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTR-QNKAGNTILHETATSNHAL   80 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~   80 (466)
                      ..|+.+.+..++.+++ ...+..|.+|.||||+|+..|+.+++++|++.+++   .+++. .|..|.||||+|+..|+. 
T Consensus        11 ~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~L~~A~~~~~~-   85 (228)
T 2dzn_A           11 MENEFFKVQELLHSKP-SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN---VNLDDYPDDSGWTPFHIACSVGNL-   85 (228)
T ss_dssp             HTTCHHHHHHHHHHCG-GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT---CCGGGCCCTTSCCHHHHHHHHCCH-
T ss_pred             HhCCHHHHHHHHhcCc-cccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc---ccccccCCCCCCCHHHHHHHcCCH-
Confidence            3688888888888873 44556899999999999999999999999997643   34555 889999999999999996 


Q ss_pred             HHHHHHHHhC-CCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHH
Q 037168           81 PVADKVLRKA-PGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEI  159 (466)
Q Consensus        81 ~~v~~Ll~~~-~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~  159 (466)
                      ++++.|++++ +.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++
T Consensus        86 ~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~  155 (228)
T 2dzn_A           86 EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-------GASVRIKDKFNQIPLH---RAASVGSLKL  155 (228)
T ss_dssp             HHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHTTCHHH
T ss_pred             HHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-------CCCccccCCCCCCHHH---HHHHcCCHHH
Confidence            9999999984 377899999999999999999999999999998       6788899999999999   7778999999


Q ss_pred             HHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHH-hcCcccccccccccCCCCCchhhhhccCc
Q 037168          160 VKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVV-QMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       160 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll-~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      ++.|++..+.+++.+|..|+||||+|+.+|+.+++++|+ +.|++    ++.+|.+|+||||+|++.+.
T Consensus       156 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~----~~~~~~~g~t~l~~A~~~~~  220 (228)
T 2dzn_A          156 IELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE----YDLVDNKGAKAEDVALNEQV  220 (228)
T ss_dssp             HHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC----SCCBCTTSCBGGGGCSSTTH
T ss_pred             HHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC----CCccCCCCCcHHHHHHHHHH
Confidence            999999444999999999999999999999999999999 88998    99999999999999987543

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=1.4e-35  Score=294.58  Aligned_cols=231  Identities=18%  Similarity=0.143  Sum_probs=192.8

Q ss_pred             CCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc
Q 037168           16 VPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG   95 (466)
Q Consensus        16 ~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~   95 (466)
                      .++.+.+..|.+|.||||+||..|+.++|++|++     .+.+++.+|..|.||||+|+..|+. +++++|++.+ .  +
T Consensus         8 ~~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~-----~g~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g-~--~   78 (364)
T 3ljn_A            8 FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIE-----TGVSPTIQNRFGCTALHLACKFGCV-DTAKYLASVG-E--V   78 (364)
T ss_dssp             --------CCHHHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHCCH-HHHHHHHHHC-C--C
T ss_pred             ccCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCcHHHHHHHcCCH-HHHHHHHHCC-C--C
Confidence            3456677789999999999999999999999999     4567899999999999999999997 9999999994 4  3


Q ss_pred             CcCCCCChHHHHHHHcCCHHHHHHHHhccC----CCC----------CCCcccccccCCCCChhhHHHHHhhcC--cHHH
Q 037168           96 MRNNNGETALLRAARYGKVDIFNFLAGKIS----GYD----------HATRLPFLHRNDKTNVLHIAILSLHFG--CIEI  159 (466)
Q Consensus        96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~----~~~----------~~~~~~~~~d~~g~TpLh~A~~a~~~g--~~~~  159 (466)
                      ..+.+|.||||+|+..|+.+++++|++...    ..+          ......+.+|.+|.||||   .|+..|  +.++
T Consensus        79 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~---~A~~~g~~~~~~  155 (364)
T 3ljn_A           79 HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALH---WCVGLGPEYLEM  155 (364)
T ss_dssp             CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHH---HHHHSCGGGHHH
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHH---HHHHcCCchHHH
Confidence            445689999999999999999999999732    100          011233448889999999   777889  9999


Q ss_pred             HHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc-cccccccccCCCCCchhhhhccCcchhhhccCChh
Q 037168          160 VKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP-LRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPA  238 (466)
Q Consensus       160 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~-~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~  238 (466)
                      ++.|++ .+++++.+|..|+||||+|+.+|+.+++++|+++|++ ....+|.+|..|+||||+|+..++.++++.|    
T Consensus       156 v~~Ll~-~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L----  230 (364)
T 3ljn_A          156 IKILVQ-LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF----  230 (364)
T ss_dssp             HHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH----
T ss_pred             HHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH----
Confidence            999999 6899999999999999999999999999999998876 2334789999999999999999999998777    


Q ss_pred             hhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          239 LLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       239 ~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                                     +..+.+++.+|.+|.||++++.+..
T Consensus       231 ---------------l~~gad~~~~d~~g~tpL~~A~~~g  255 (364)
T 3ljn_A          231 ---------------VEMGIDVNMEDNEHTVPLYLSVRAA  255 (364)
T ss_dssp             ---------------HTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred             ---------------HHcCCCCCCCCCCCCCHHHHHHHhC
Confidence                           3345667899999999999998764

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.2e-34  Score=294.89  Aligned_cols=250  Identities=19%  Similarity=0.203  Sum_probs=186.4

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+++..+..|.||||+|++.|+.++++.|++.     +.+.+..+..|.||||+|+..|+. ++
T Consensus        90 ~g~~~~v~~Ll~~g--a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~~g~~-~~  161 (437)
T 1n11_A           90 IGHTNMVKLLLENN--ANPNLATTAGHTPLHIAAREGHVETVLALLEK-----EASQACMTKKGFTPLHVAAKYGKV-RV  161 (437)
T ss_dssp             HTCHHHHHHHHHHT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHTTCH-HH
T ss_pred             CCCHHHHHHHHhCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-----CCCCcCCCCCCCCHHHHHHHcCCH-HH
Confidence            46666666666664  77888999999999999999999999999994     455677899999999999999997 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD  162 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~  162 (466)
                      +++|+++ +.+++..|..|.||||+|+..|+.+++++|++.       +.+++.++.+|.||||   .|+..|+.++++.
T Consensus       162 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~  230 (437)
T 1n11_A          162 AELLLER-DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-------GGSPHSPAWNGYTPLH---IAAKQNQVEVARS  230 (437)
T ss_dssp             HHHHHHT-TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG-------TCCSCCCCTTCCCHHH---HHHHTTCHHHHHH
T ss_pred             HHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHH
Confidence            9999998 778999999999999999999999999999998       4455566667777777   5556677777777


Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhh
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQ  242 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~  242 (466)
                      |++ ++.+++..|..|+||||+|+..|+.+++++|+++|++    ++.+|..|+||||+|++.++.++++.|......+.
T Consensus       231 Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~  305 (437)
T 1n11_A          231 LLQ-YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD  305 (437)
T ss_dssp             HHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred             HHH-cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC
Confidence            776 6666676777777777777777777777777776666    66666666666666666666666655422111100


Q ss_pred             -------------hH---hhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          243 -------------DE---LLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       243 -------------~~---~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                                   ..   ....+.+  +..+.+++.+|..|.||++++.+..
T Consensus       306 ~~~~~g~t~L~~A~~~g~~~~v~~L--l~~gad~n~~~~~g~t~L~~A~~~g  355 (437)
T 1n11_A          306 ATTRMGYTPLHVASHYGNIKLVKFL--LQHQADVNAKTKLGYSPLHQAAQQG  355 (437)
T ss_dssp             CCCSSCCCHHHHHHHSSCSHHHHHH--HHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHcCcHHHHHHH--HhcCCCCCCCCCCCCCHHHHHHHCC
Confidence                         00   0001111  1245677889999999999988654

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=6e-35  Score=280.36  Aligned_cols=205  Identities=13%  Similarity=0.080  Sum_probs=186.1

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      ..+.+++.++|.+.   +++..|.+|.||||+|+..|+.++++.|++     .+.+++.+  +|+||||+|+..|+. ++
T Consensus         9 ~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~--~g~t~L~~A~~~g~~-~~   77 (285)
T 3kea_A            9 TWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLN-----AGALKNLL--ENEFPLHQAATLEDT-KI   77 (285)
T ss_dssp             GCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTGGGSCC--TTCCHHHHHTTSSSC-HH
T ss_pred             hcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHh-----CCCCCCCC--CCCCHHHHHHHcCCH-HH
Confidence            56788999999876   478899999999999999999999999999     55667766  499999999999998 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC-CChhhHHHHHhhcCcHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK-TNVLHIAILSLHFGCIEIVK  161 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g-~TpLh~A~~a~~~g~~~~v~  161 (466)
                      +++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.+|..| .||||   .|+..|+.++++
T Consensus        78 v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~g~~t~L~---~A~~~~~~~~v~  146 (285)
T 3kea_A           78 VKILLFS-GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-------NWRLMFYGKTGWKTSFY---HAVMLNDVSIVS  146 (285)
T ss_dssp             HHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------CGGGGGCSSSGGGSHHH---HHHHTTCHHHHH
T ss_pred             HHHHHHC-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-------CCCCCccCCCCCCCHHH---HHHHcCCHHHHH
Confidence            9999998 788999999999999999999999999999999       67899999999 89999   777899999999


Q ss_pred             HHHHHCCCccccccc-CCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc-hhhhhccCcchhhhccCC
Q 037168          162 DILSVYPQAVEHIDD-EGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI-FHMAGIKRKDYVAEKMEG  236 (466)
Q Consensus       162 ~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp-LHlAa~~~~~~~~~~l~~  236 (466)
                      .|++ .+.+.  .|. .|+||||+|+.+|+.+++++|+++|++    ++.+|..|+|| ||+|+..++.++++.|..
T Consensus       147 ~Ll~-~g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~  216 (285)
T 3kea_A          147 YFLS-EIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTS----TNTNNSLLFIPDIKLAIDNKDIEMLQALFK  216 (285)
T ss_dssp             HHHT-TSCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHH----TCTTCCCBCCTTHHHHHHHTCHHHHHHHTT
T ss_pred             HHHh-CCCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCC----CCcccCCCCChHHHHHHHcCCHHHHHHHHH
Confidence            9999 45444  333 899999999999999999999999998    99999999998 999999999999988744

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=1.6e-35  Score=295.32  Aligned_cols=226  Identities=15%  Similarity=0.121  Sum_probs=193.6

Q ss_pred             cccccC-CCCCcHHHHHHHcCCHHHHHHHHHhCCC---CchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc
Q 037168           20 ALYVFT-IHDDTVLHMATYTKKSDLVIKLLDELPD---QSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG   95 (466)
Q Consensus        20 ~~~~~~-~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~   95 (466)
                      .++..| ..|+||||+||..|+.++++.|+.....   ..+++++.+|..|.||||+|+..|+. +++++|++. +++++
T Consensus       116 ~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~-ga~~~  193 (373)
T 2fo1_E          116 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR-RLVAYLMKA-GADPT  193 (373)
T ss_dssp             TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSC
T ss_pred             cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChH-HHHHHHHHC-CCCCc
Confidence            456667 7899999999999999888888731000   04677899999999999999999996 999999998 78899


Q ss_pred             CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcC---cHHHHHHHHHHCCCccc
Q 037168           96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG---CIEIVKDILSVYPQAVE  172 (466)
Q Consensus        96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g---~~~~v~~Ll~~~~~~~~  172 (466)
                      .+|..|.||||+|+..|+.+++++|++.+.    .+.+++.+|.+|.||||   .|+..+   +.++++.|++ .+.+++
T Consensus       194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~d~~g~t~L~---~A~~~~~~~~~~~v~~Ll~-~g~~~~  265 (373)
T 2fo1_E          194 IYNKSERSALHQAAANRDFGMMVYMLNSTK----LKGDIEELDRNGMTALM---IVAHNEGRDQVASAKLLVE-KGAKVD  265 (373)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHTTSHH----HHHTTSCCCTTSCCHHH---HHHHSCSTTHHHHHHHHHH-HTCCSS
T ss_pred             ccCCCCCCHHHHHHHCCCHHHHHHHHhcCc----cccChhhcCCCCCCHHH---HHHHhCCcchHHHHHHHHH-CCCCcc
Confidence            999999999999999999999999998731    01577888999999999   555666   9999999999 677776


Q ss_pred             c--------cccCCChHHHHHHHcCChhHHHHHHhcC-cccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhh
Q 037168          173 H--------IDDEGRNILHVAIKYRQLEIFERVVQME-IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQD  243 (466)
Q Consensus       173 ~--------~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~  243 (466)
                      .        .|..|+||||+|+.+|+.+++++|++++ ++    ++.+|.+|+||||+|+..|+.++++.|         
T Consensus       266 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----~n~~d~~g~TpL~~A~~~g~~~iv~~L---------  332 (373)
T 2fo1_E          266 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN----KDKQDEDGKTPIMLAAQEGRIEVVMYL---------  332 (373)
T ss_dssp             CCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC----TTCCCTTCCCHHHHHHHHTCHHHHHHH---------
T ss_pred             cccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC----ccCcCCCCCCHHHHHHHcCCHHHHHHH---------
Confidence            5        6779999999999999999999999876 77    899999999999999999999998776         


Q ss_pred             HhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          244 ELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       244 ~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                                +..+.+++.+|.+|+||++++.+..
T Consensus       333 ----------l~~gad~~~~d~~g~t~l~~A~~~g  357 (373)
T 2fo1_E          333 ----------IQQGASVEAVDATDHTARQLAQANN  357 (373)
T ss_dssp             ----------HHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred             ----------HHcCCCccCCCCCCCCHHHHHHHcC
Confidence                      2345667899999999999998754

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.5e-34  Score=275.77  Aligned_cols=204  Identities=18%  Similarity=0.095  Sum_probs=169.3

Q ss_pred             ccchHHHHHHHHhCCCc-cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPDH-ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~-~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      .|+.+.+..++..+.+. .++..|..|.||||+||..|+.+++++|++     ++++++.+|..|.||||+|+..|+. +
T Consensus        19 ~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~g~tpL~~A~~~~~~-~   92 (282)
T 1oy3_D           19 HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-----AGAGVLVAERGGHTALHLACRVRAH-T   92 (282)
T ss_dssp             TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSSCCCTTSCCHHHHHTTTTCH-H
T ss_pred             cCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCc-c
Confidence            57777777777765332 278899999999999999999999999999     5567889999999999999999996 9


Q ss_pred             HHHHHHHhCCC----------------------------------------------cccCcCCCCChHHHHHHHcCCHH
Q 037168           82 VADKVLRKAPG----------------------------------------------LLGMRNNNGETALLRAARYGKVD  115 (466)
Q Consensus        82 ~v~~Ll~~~~~----------------------------------------------~~~~~d~~G~tpLh~Aa~~g~~~  115 (466)
                      ++++|+++++.                                              +++.+|..|.||||+|+..|+.+
T Consensus        93 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~  172 (282)
T 1oy3_D           93 CACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE  172 (282)
T ss_dssp             HHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             hhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHH
Confidence            99999986422                                              36788999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHH
Q 037168          116 IFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF  194 (466)
Q Consensus       116 ~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv  194 (466)
                      ++++|++.       +.+++.++. .|+||||   .|+..|+.++++.|++ .+++++.+|..|+||||+|+.+|+.+++
T Consensus       173 ~v~~Ll~~-------g~~~~~~~~~~g~tpL~---~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v  241 (282)
T 1oy3_D          173 MVRLLRDA-------GADLNKPEPTCGRTPLH---LAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILA  241 (282)
T ss_dssp             HHHHHHHH-------TCCTTCCCTTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred             HHHHHHHc-------CCCCCCCCCCCCcCHHH---HHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence            99999998       667788875 4999999   7778999999999999 7999999999999999999999999999


Q ss_pred             HHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          195 ERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       195 ~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      ++|+++|++    ++.+|.+|.|||++|.....
T Consensus       242 ~~Ll~~ga~----~~~~~~~g~tpl~~a~~~~~  270 (282)
T 1oy3_D          242 RLLRAHGAP----EPEDGGDKLSPCSSSGSDSD  270 (282)
T ss_dssp             HHHHHTTCC----CCCCC---------------
T ss_pred             HHHHHcCCC----cCcCCCcccccccccCCccc
Confidence            999999999    99999999999999997653

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=100.00  E-value=2.4e-34  Score=266.89  Aligned_cols=199  Identities=19%  Similarity=0.180  Sum_probs=169.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcc----cCcCCCCC
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLL----GMRNNNGE  102 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~----~~~d~~G~  102 (466)
                      .|+||||.|++.|+.++++.|++.    .+.+++.+|..|+||||+|+..|+. +++++|++.+....    +.+|.+|+
T Consensus         2 ~g~t~L~~A~~~g~~~~v~~Ll~~----~g~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~g~   76 (232)
T 2rfa_A            2 IWESPLLLAAKENDVQALSKLLKF----EGCEVHQRGAMGETALHIAALYDNL-EAAMVLMEAAPELVFEPMTSELYEGQ   76 (232)
T ss_dssp             CTTCHHHHHHHTTCHHHHHHHHTT----TCSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCH-HHHHHHHHcCchhccccccccCCCCc
Confidence            589999999999999999999994    2567899999999999999999996 99999999844321    67788999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCC------cccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHAT------RLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD  176 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~------~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~  176 (466)
                      ||||+|+..|+.+++++|++.+.+.+...      ...+..|.+|+||||   .|+..|+.++++.|++ .+++++.+|.
T Consensus        77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~  152 (232)
T 2rfa_A           77 TALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLS---FAACVGSEEIVRLLIE-HGADIRAQDS  152 (232)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCT
T ss_pred             CHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCC
Confidence            99999999999999999999844222110      011223447999999   7778899999999998 7999999999


Q ss_pred             CCChHHHHHHHcCChhHH----HHHHhcCcccc--cccccccCCCCCchhhhhccCcchhhhcc
Q 037168          177 EGRNILHVAIKYRQLEIF----ERVVQMEIPLR--RLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       177 ~G~t~Lh~A~~~~~~~iv----~~Ll~~g~~~~--~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      .|+||||+|+.+|+.+++    ++|+++|++..  .+.+.+|.+|+||||+|++.++.++++.|
T Consensus       153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~L  216 (232)
T 2rfa_A          153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL  216 (232)
T ss_dssp             TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            999999999999999988    99999998721  12278999999999999999999998777

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.5e-34  Score=273.65  Aligned_cols=204  Identities=15%  Similarity=0.093  Sum_probs=181.7

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+++..|.+|.||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. ++
T Consensus        69 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~g~t~L~~A~~~~~~-~~  140 (285)
T 3d9h_A           69 HGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLK-----HGAQVNGVTADWHTPLFNACVSGSW-DC  140 (285)
T ss_dssp             TTCHHHHHHHHHTT--CCSCEECTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCSSCCCTTCCCHHHHHHHHTCH-HH
T ss_pred             cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCHH-HH
Confidence            57777777777765  6788899999999999999999999999999     5567889999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD  162 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~  162 (466)
                      +++|++. +.+++. +.+|.||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.
T Consensus       141 v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~v~~  208 (285)
T 3d9h_A          141 VNLLLQH-GASVQP-ESDLASPIHEAARRGHVECVNSLIAY-------GGNIDHKISHLGTPLY---LACENQQRACVKK  208 (285)
T ss_dssp             HHHHHHT-TCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCBTTTBCHHH---HHHHTTCHHHHHH
T ss_pred             HHHHHHC-CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCCcCCCCCCHHH---HHHHcCcHHHHHH
Confidence            9999998 555664 44599999999999999999999998       6788899999999999   7778999999999


Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |++ .+.+++. |..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..  .++++.|
T Consensus       209 Ll~-~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~--~~~~~~L  272 (285)
T 3d9h_A          209 LLE-SGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD----TQAKNAEGKRPVELVPPE--SPLAQLF  272 (285)
T ss_dssp             HHH-TTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCTT--SHHHHHH
T ss_pred             HHH-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHhcCc--cHHHHHH
Confidence            998 7888885 89999999999999999999999999998    999999999999999943  4555444

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=4.3e-34  Score=265.64  Aligned_cols=218  Identities=18%  Similarity=0.153  Sum_probs=192.0

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN  100 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~  100 (466)
                      ++..|..|.||||.|++.|+.+++++|++     .+.+++.+|..|.||||+|+..|+. +++++|++.+.......+..
T Consensus         2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~   75 (240)
T 3eu9_A            2 MTHIDDYSTWDIVKATQYGIYERCRELVE-----AGYDVRQPDKENVTLLHWAAINNRI-DLVKYYISKGAIVDQLGGDL   75 (240)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCBTTT
T ss_pred             ccccccccchHHHHHHHcCChHHHHHHHH-----cCCCcCCCCCCCCCHHHHHHHhCCH-HHHHHHHHcCCcchhhcCCc
Confidence            35578899999999999999999999999     4566888999999999999999997 99999999865544455667


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCCh
Q 037168          101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRN  180 (466)
Q Consensus       101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t  180 (466)
                      |.||||+|+..|+.+++++|++.       +.+++.+|..|.||||   .|+..|+.++++.|++ .+.+++.+|..|+|
T Consensus        76 ~~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~l~---~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t  144 (240)
T 3eu9_A           76 NSTPLHWATRQGHLSMVVQLMKY-------GADPSLIDGEGCSCIH---LAAQFGHTSIVAYLIA-KGQDVDMMDQNGMT  144 (240)
T ss_dssp             TBCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred             CCChhHHHHHcCCHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHcCHHHHHHHHHh-cCCCccccCCCCCc
Confidence            99999999999999999999998       6678888999999999   7778899999999998 78899999999999


Q ss_pred             HHHHHHHcCC-hhHHHHHHhcCcccccccccccC-CCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccc
Q 037168          181 ILHVAIKYRQ-LEIFERVVQMEIPLRRLVRKIDY-NGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPH  258 (466)
Q Consensus       181 ~Lh~A~~~~~-~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~  258 (466)
                      |||+|+..++ .+++++|++.|++    ++..+. .|+||||+|+..++.++++.|.                   ..+.
T Consensus       145 ~l~~a~~~~~~~~~~~~L~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------------------~~g~  201 (240)
T 3eu9_A          145 PLMWAAYRTHSVDPTRLLLTFNVS----VNLGDKYHKNTALHWAVLAGNTTVISLLL-------------------EAGA  201 (240)
T ss_dssp             HHHHHHHHCCSSTTHHHHHHTTCC----TTCCCTTTCCCHHHHHHHHTCHHHHHHHH-------------------HHTC
T ss_pred             HHHHHHHhCChHHHHHHHHhcCCC----cchhhccCCCcHHHHHHHcCCHHHHHHHH-------------------HcCC
Confidence            9999997776 8999999999988    888887 9999999999999998886662                   2345


Q ss_pred             ccccccCCCCChHHHHHHHh
Q 037168          259 FLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       259 ~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      +++.+|.+|+||++++.+..
T Consensus       202 ~~~~~~~~g~t~l~~A~~~~  221 (240)
T 3eu9_A          202 NVDAQNIKGESALDLAKQRK  221 (240)
T ss_dssp             CTTCBCTTSCBHHHHHHHTT
T ss_pred             CCCCcCCCCCCHHHHHHHcC
Confidence            57889999999999998764

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=2e-33  Score=276.02  Aligned_cols=242  Identities=21%  Similarity=0.133  Sum_probs=199.2

Q ss_pred             ccchHHHHHHHHhCCCccccccCC-CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTI-HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~-~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      +||.+.|..+|+.+  ++++..+. .|+||||+||+.|+.++|++||+     ++++++.+|..+.+|+|.++..+.. .
T Consensus        35 ~g~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~-----~ga~~~~~~~~~~~~~~~~~~~~~~-~  106 (337)
T 4g8k_A           35 NEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLR-----HGADPVLRKKNGATPFILAAIAGSV-K  106 (337)
T ss_dssp             TTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHTCH-H
T ss_pred             cCCHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHH-----cCCchhhhccCCCchhHHHHhcccc-h
Confidence            57778787777765  66776654 58899999999999999999998     5566788888999999999988885 7


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCC---CCcccccccCCCCChhhHHHHHhhcCcHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDH---ATRLPFLHRNDKTNVLHIAILSLHFGCIE  158 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~---~~~~~~~~d~~g~TpLh~A~~a~~~g~~~  158 (466)
                      +.+.+++. +.+++.+|..|.||||+|+..|+.+++++|++.+...+.   ...+....+..|.||||   .|+..|+.+
T Consensus       107 ~~~~~~~~-~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~---~A~~~g~~~  182 (337)
T 4g8k_A          107 LLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM---DAAEKGHVE  182 (337)
T ss_dssp             HHHHHHTT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHH---HHHHHTCHH
T ss_pred             hhHHhhhc-cchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHH---HHHHCCCHH
Confidence            77777766 677999999999999999999999999999998654321   12334456778999999   777899999


Q ss_pred             HHHHHHHHCCCcccccccCCChHHHHHHHcCC----hhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          159 IVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ----LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       159 ~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +++.|++..|++++.+|..|+|+||.++..++    .+++++|+++|++    +|.+|.+|+||||+|+..++.++++.|
T Consensus       183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad----~n~~d~~g~t~L~~a~~~~~~~~v~~L  258 (337)
T 4g8k_A          183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVRGERGKTPLILAVEKKHLGLVQRL  258 (337)
T ss_dssp             HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC----TTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHhhhhHHHHHH
Confidence            99999988899999999999999999887654    4588999999998    999999999999999999998887555


Q ss_pred             CChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          235 EGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       235 ~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      .                  ...+.+++.+|.+|+||+++|.+..
T Consensus       259 l------------------~~~~~~vn~~d~~G~TpL~~A~~~g  284 (337)
T 4g8k_A          259 L------------------EQEHIEINDTDSDGKTALLLAVELK  284 (337)
T ss_dssp             H------------------TSTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred             H------------------HhcCCcccCcCCCCCCHHHHHHHcC
Confidence            1                  1234567899999999999998654

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=1e-33  Score=256.57  Aligned_cols=191  Identities=18%  Similarity=0.214  Sum_probs=175.5

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      +..+.||||.|+..|+.+.++.|++.+    +.+++..|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~   75 (201)
T 3hra_A            2 KTYEVGALLEAANQRDTKKVKEILQDT----TYQVDEVDTEGNTPLNIAVHNNDI-EIAKALIDR-GADINLQNSISDSP   75 (201)
T ss_dssp             -CCCTTHHHHHHHTTCHHHHHHHHTCT----TCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred             CcccccHHHHHHHhccHHHHHHHHHcC----CCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCH
Confidence            457899999999999999999999953    336888999999999999999996 999999998 78899999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV  184 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~  184 (466)
                      ||+|+..|+.+++++|++..      +.+++.+|..|.||||   .|+..|+.++++.|++..+.+++.+|..|+||||+
T Consensus        76 l~~A~~~~~~~~~~~Ll~~~------~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~  146 (201)
T 3hra_A           76 YLYAGAQGRTEILAYMLKHA------TPDLNKHNRYGGNALI---PAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIE  146 (201)
T ss_dssp             HHHHHHTTCHHHHHHHHHHS------CCCTTCCCTTSCCSHH---HHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHhcc------CcccccccCCCCcHHH---HHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHH
Confidence            99999999999999999653      4678889999999999   77789999999999997669999999999999999


Q ss_pred             HHHcCC-----hhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          185 AIKYRQ-----LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       185 A~~~~~-----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |+..++     .+++++|+++|++    ++.+|.+|+||||+|++.++.++++.|
T Consensus       147 A~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~~~L  197 (201)
T 3hra_A          147 AVGLREGNQLYQDIVKLLMENGAD----QSIKDNSGRTAMDYANQKGYTEISKIL  197 (201)
T ss_dssp             HHHSSCCSHHHHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HHHhccchhhHHHHHHHHHHCCCC----CCccCCCCCCHHHHHHHcCCHhHHHHH
Confidence            999998     9999999999998    899999999999999999999988666

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.7e-33  Score=268.34  Aligned_cols=209  Identities=20%  Similarity=0.202  Sum_probs=186.7

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+++..|.+|.||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. ++
T Consensus        49 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~  120 (285)
T 1wdy_A           49 MSREDIVELLLRHG--ADPVLRKKNGATPFLLAAIAGSVKLLKLFLS-----KGADVNECDFYGFTAFMEAAVYGKV-KA  120 (285)
T ss_dssp             TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCBCTTCCBHHHHHHHTTCH-HH
T ss_pred             cCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCcccCCHHHHHHHhCCH-HH
Confidence            45666666666554  6788899999999999999999999999999     4566888999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCc----------CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHh
Q 037168           83 ADKVLRKAPGLLGMR----------NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSL  152 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~----------d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~  152 (466)
                      +++|++. +.+++.+          +..|.||||+|+..|+.+++++|++..      +.+++.+|..|+||||   .|+
T Consensus       121 ~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------~~~~~~~~~~g~t~l~---~a~  190 (285)
T 1wdy_A          121 LKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM------GADVNACDNMGRNALI---HAL  190 (285)
T ss_dssp             HHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS------CCCTTCCCTTSCCHHH---HHH
T ss_pred             HHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc------CCCCCccCCCCCCHHH---HHH
Confidence            9999998 5667766          788999999999999999999999862      4677888999999999   566


Q ss_pred             hcCc----HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHh-cCcccccccccccCCCCCchhhhhccCc
Q 037168          153 HFGC----IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ-MEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       153 ~~g~----~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      ..++    .++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|++ .|++    ++.+|.+|+||||+|++.++
T Consensus       191 ~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~----~~~~~~~g~t~l~~A~~~~~  265 (285)
T 1wdy_A          191 LSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKL  265 (285)
T ss_dssp             HCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC----TTCCCTTSCCHHHHHHHTTC
T ss_pred             HccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC----ccccCCCCCcHHHHHHHcCc
Confidence            7777    899999998 899999999999999999999999999999999 8888    89999999999999999999


Q ss_pred             chhhhcc
Q 037168          228 DYVAEKM  234 (466)
Q Consensus       228 ~~~~~~l  234 (466)
                      .++++.|
T Consensus       266 ~~i~~~L  272 (285)
T 1wdy_A          266 KKIAELL  272 (285)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998777

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=8.7e-34  Score=282.80  Aligned_cols=204  Identities=19%  Similarity=0.225  Sum_probs=182.5

Q ss_pred             CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCC--Cccc
Q 037168           18 DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP--GLLG   95 (466)
Q Consensus        18 ~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~--~~~~   95 (466)
                      +.+++..|.+|.||||+|+..|+.++|++|++     .+++++.+|..|.||||+|+..|+. +++++|++...  .+++
T Consensus       156 ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~-----~ga~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~  229 (373)
T 2fo1_E          156 GADVNAMDCDENTPLMLAVLARRRRLVAYLMK-----AGADPTIYNKSERSALHQAAANRDF-GMMVYMLNSTKLKGDIE  229 (373)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTCCCHHHHHHHTTCH-HHHHHHTTSHHHHHTTS
T ss_pred             CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHH-----CCCCCcccCCCCCCHHHHHHHCCCH-HHHHHHHhcCccccChh
Confidence            47789999999999999999999999999999     5667889999999999999999996 99999998732  6789


Q ss_pred             CcCCCCChHHHHHHHcC---CHHHHHHHHhccCCCCCCC-cccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcc
Q 037168           96 MRNNNGETALLRAARYG---KVDIFNFLAGKISGYDHAT-RLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAV  171 (466)
Q Consensus        96 ~~d~~G~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~~-~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~  171 (466)
                      ..|..|.||||+|+..|   +.+++++|++.+.+.+..+ ...+.+|..|+||||   .|+..|+.++++.|++..+.++
T Consensus       230 ~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh---~A~~~g~~~~v~~Ll~~~~~~~  306 (373)
T 2fo1_E          230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALH---YAAQVSNMPIVKYLVGEKGSNK  306 (373)
T ss_dssp             CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHH---HHHSSCCHHHHHHHHHHSCCCT
T ss_pred             hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHH---HHHHhCCHHHHHHHHHhcCCCc
Confidence            99999999999999998   8999999999954332111 112346779999999   7779999999999999778999


Q ss_pred             cccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          172 EHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       172 ~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|+..++.++++.|
T Consensus       307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad----~~~~d~~g~t~l~~A~~~g~~~iv~~L  365 (373)
T 2fo1_E          307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS----VEAVDATDHTARQLAQANNHHNIVDIF  365 (373)
T ss_dssp             TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            99999999999999999999999999999998    999999999999999999999998776

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=4.9e-34  Score=283.34  Aligned_cols=208  Identities=16%  Similarity=0.135  Sum_probs=186.4

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.|..++..+  .+++..|..|.||||+||..|+.++|++|++.+.+       ..+.+|.||||+|+..|+. ++
T Consensus        30 ~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~g~t~L~~A~~~g~~-~~   99 (364)
T 3ljn_A           30 KGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV-------HSLWHGQKPIHLAVMANKT-DL   99 (364)
T ss_dssp             HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-------CCCBTTBCHHHHHHHTTCH-HH
T ss_pred             cCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-------ccccCCCCHHHHHHHcCCH-HH
Confidence            57778888777765  77889999999999999999999999999996542       2345899999999999996 99


Q ss_pred             HHHHHHhC---CCcccC-----------------cCCCCChHHHHHHHcC--CHHHHHHHHhccCCCCCCCcccccccCC
Q 037168           83 ADKVLRKA---PGLLGM-----------------RNNNGETALLRAARYG--KVDIFNFLAGKISGYDHATRLPFLHRND  140 (466)
Q Consensus        83 v~~Ll~~~---~~~~~~-----------------~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~d~~  140 (466)
                      +++|++..   +..++.                 +|..|.||||+|+..|  +.+++++|++.       +.+++.+|.+
T Consensus       100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-------ga~~~~~d~~  172 (364)
T 3ljn_A          100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-------GASPTAKDKA  172 (364)
T ss_dssp             HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-------TCCTTCCCTT
T ss_pred             HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-------CCCCcccCCC
Confidence            99999872   334444                 8899999999999999  99999999999       6788899999


Q ss_pred             CCChhhHHHHHhhcCcHHHHHHHHHHCCCc-----ccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCC
Q 037168          141 KTNVLHIAILSLHFGCIEIVKDILSVYPQA-----VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG  215 (466)
Q Consensus       141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G  215 (466)
                      |+||||   .|+..|+.++++.|++ .+.+     ++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|
T Consensus       173 g~t~L~---~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~~~~d~~g  244 (364)
T 3ljn_A          173 DETPLM---RAMEFRNREALDLMMD-TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID----VNMEDNEH  244 (364)
T ss_dssp             SCCHHH---HHHHTTCHHHHHHHHH-HCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC----TTCCCTTS
T ss_pred             CCCHHH---HHHHcCCHHHHHHHHh-cccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCC
Confidence            999999   7778999999999999 5556     999999999999999999999999999999999    89999999


Q ss_pred             CCchhhhhccCcchhhhccC
Q 037168          216 NTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       216 ~TpLHlAa~~~~~~~~~~l~  235 (466)
                      +||||+|++.++.++++.|.
T Consensus       245 ~tpL~~A~~~g~~~~v~~Ll  264 (364)
T 3ljn_A          245 TVPLYLSVRAAMVLLTKELL  264 (364)
T ss_dssp             CCHHHHHHHTCCHHHHHHHH
T ss_pred             CCHHHHHHHhChHHHHHHHH
Confidence            99999999999999997773

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=6.2e-34  Score=274.38  Aligned_cols=207  Identities=19%  Similarity=0.219  Sum_probs=181.8

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+++..|.+|.||||+||..|+.+++++|++     .+++++.+|..|.||||+|+..|+. ++
T Consensus        50 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~g~tpL~~A~~~g~~-~~  121 (299)
T 1s70_B           50 SGDTEEVLRLLERG--ADINYANVDGLTALHQACIDDNVDMVKFLVE-----NGANINQPDNEGWIPLHAAASCGYL-DI  121 (299)
T ss_dssp             HTCHHHHHHHHHHC--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HH
T ss_pred             cCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCcHHHHHHHcCCH-HH
Confidence            58888888888876  6688899999999999999999999999999     5667889999999999999999997 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCC--------------------CCCcccccccCCCC
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYD--------------------HATRLPFLHRNDKT  142 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--------------------~~~~~~~~~d~~g~  142 (466)
                      +++|+++ +.+++.+|..|.||||+|+..|+.++++.++.......                    .........+..|.
T Consensus       122 v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~  200 (299)
T 1s70_B          122 AEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG  200 (299)
T ss_dssp             HHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred             HHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCC
Confidence            9999998 77899999999999999999999999998886532100                    00112223567899


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA  222 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA  222 (466)
                      ||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||+|
T Consensus       201 t~L~---~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A  272 (299)
T 1s70_B          201 TALH---VAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD----MEAVNKVGQTAFDVA  272 (299)
T ss_dssp             CHHH---HHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTTTSC
T ss_pred             CHHH---HHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHH
Confidence            9999   7778899999999998 8999999999999999999999999999999999998    999999999999999


Q ss_pred             hccC
Q 037168          223 GIKR  226 (466)
Q Consensus       223 a~~~  226 (466)
                      ++..
T Consensus       273 ~~~~  276 (299)
T 1s70_B          273 DEDI  276 (299)
T ss_dssp             CSGG
T ss_pred             HHHH
Confidence            8643

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=5e-34  Score=280.60  Aligned_cols=220  Identities=16%  Similarity=0.129  Sum_probs=194.7

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN   98 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d   98 (466)
                      ......+..|.|+||.||+.|+.+.++.|+..    .+.+++.+|..|+||||+|+..|+. +++++|+++ +.+++.+|
T Consensus        15 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~   88 (351)
T 3utm_A           15 AKAVLTGEYKKDELLEAARSGNEEKLMALLTP----LNVNCHASDGRKSTPLHLAAGYNRV-RIVQLLLQH-GADVHAKD   88 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT----TTTTCCCSSTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCC
T ss_pred             eeeeeeccccchhHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCccC
Confidence            44556678899999999999999999999985    4567889999999999999999997 999999998 78899999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc---
Q 037168           99 NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID---  175 (466)
Q Consensus        99 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d---  175 (466)
                      ..|+||||+|+..|+.+++++|+++       +.+++.+|..|.||||   .|+..|+.++++.|++ .+.+++..|   
T Consensus        89 ~~g~t~L~~A~~~g~~~iv~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g  157 (351)
T 3utm_A           89 KGGLVPLHNACSYGHYEVTELLLKH-------GACVNAMDLWQFTPLH---EAASKNRVEVCSLLLS-HGADPTLVNCHG  157 (351)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTS
T ss_pred             CCCCcHHHHHHHCCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCccccCCC
Confidence            9999999999999999999999998       6788889999999999   7778999999999998 677766543   


Q ss_pred             ---------------------------------------------------cCCChHHHHHHHc---CChhHHHHHHhcC
Q 037168          176 ---------------------------------------------------DEGRNILHVAIKY---RQLEIFERVVQME  201 (466)
Q Consensus       176 ---------------------------------------------------~~G~t~Lh~A~~~---~~~~iv~~Ll~~g  201 (466)
                                                                         ..|+||||+|+..   ++.+++++|++.|
T Consensus       158 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g  237 (351)
T 3utm_A          158 KSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG  237 (351)
T ss_dssp             CCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT
T ss_pred             CcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC
Confidence                                                               5678999999999   5579999999999


Q ss_pred             cccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          202 IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       202 ~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      ++    +|.+|.+|+||||+|++.++.++++.|                   +..+.+++.+|..|+||++++.+..
T Consensus       238 ~~----~~~~~~~g~t~L~~A~~~g~~~~v~~L-------------------l~~ga~~n~~d~~g~t~L~~A~~~~  291 (351)
T 3utm_A          238 AN----VNEKNKDFMTPLHVAAERAHNDVMEVL-------------------HKHGAKMNALDSLGQTALHRAALAG  291 (351)
T ss_dssp             CC----TTCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             CC----cCCcCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHHcC
Confidence            98    999999999999999999999988766                   2235567889999999999998654

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=5.9e-33  Score=257.96  Aligned_cols=208  Identities=14%  Similarity=0.168  Sum_probs=185.8

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh-ccCCCCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT-RQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      .|+.+.+..++..+  .+++..+..|.||||+|+..|+.+++++|++.+++     ++ ..+..|.||||+|+..|+. +
T Consensus        19 ~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~t~L~~A~~~~~~-~   90 (240)
T 3eu9_A           19 YGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAI-----VDQLGGDLNSTPLHWATRQGHL-S   90 (240)
T ss_dssp             TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCBTTTTBCHHHHHHHHTCH-H
T ss_pred             cCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCc-----chhhcCCcCCChhHHHHHcCCH-H
Confidence            57888888777765  67888999999999999999999999999996543     33 4456699999999999996 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCc-HHHH
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGC-IEIV  160 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~-~~~v  160 (466)
                      +++.|++. +.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|.+|.||||   .|+..++ .+++
T Consensus        91 ~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-------~~~~~~~~~~g~t~l~---~a~~~~~~~~~~  159 (240)
T 3eu9_A           91 MVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-------GQDVDMMDQNGMTPLM---WAAYRTHSVDPT  159 (240)
T ss_dssp             HHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHCCSSTTH
T ss_pred             HHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-------CCCccccCCCCCcHHH---HHHHhCChHHHH
Confidence            99999988 778999999999999999999999999999998       6678889999999999   5554454 7888


Q ss_pred             HHHHHHCCCccccccc-CCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          161 KDILSVYPQAVEHIDD-EGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       161 ~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +.|++ .+.+++..+. .|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|++.++.++++.|
T Consensus       160 ~~L~~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~v~~L  229 (240)
T 3eu9_A          160 RLLLT-FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN----VDAQNIKGESALDLAKQRKNVWMINHL  229 (240)
T ss_dssp             HHHHH-TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             HHHHh-cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence            88888 8899999997 999999999999999999999999998    899999999999999999999998776

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=9.4e-33  Score=243.81  Aligned_cols=157  Identities=24%  Similarity=0.266  Sum_probs=145.6

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      ++|+.||+.|+.++|+.||+     .|++++.+|.+|+||||+|+..++. ++++.|++. +.+++.+|.+|+||||+|+
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~-----~Gadvn~~d~~g~t~l~~a~~~~~~-~~~~~ll~~-gad~~~~d~~g~TpLh~A~   78 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIE-----NGADVNASDSDGRTPLHHAAENGHK-EVVKLLISK-GADVNAKDSDGRTPLHHAA   78 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHhc-ccchhhhccCCCCHHHHHH
Confidence            47999999999999999999     5677899999999999999999996 999999988 7889999999999999999


Q ss_pred             HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC
Q 037168          110 RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR  189 (466)
Q Consensus       110 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~  189 (466)
                      ..|+.+++++|++.       +++++.+|.+|+||||   .|+..|+.++++.|++ .+++++.+|.+|+||||+|+.+|
T Consensus        79 ~~g~~~~v~~Ll~~-------gadvn~~d~~G~TpLh---~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g  147 (169)
T 4gpm_A           79 ENGHKEVVKLLISK-------GADVNAKDSDGRTPLH---HAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHG  147 (169)
T ss_dssp             HTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HcCCHHHHHHHHHC-------cCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcC
Confidence            99999999999998       7789999999999999   7778999999999998 89999999999999999999999


Q ss_pred             ChhHHHHHHhcCccc
Q 037168          190 QLEIFERVVQMEIPL  204 (466)
Q Consensus       190 ~~~iv~~Ll~~g~~~  204 (466)
                      +.+++++|+++|++.
T Consensus       148 ~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A          148 NEEVVKLLEKQGGWL  162 (169)
T ss_dssp             CHHHHHHHHTC----
T ss_pred             CHHHHHHHHHCCCCc
Confidence            999999999999983

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=1.3e-33  Score=266.21  Aligned_cols=188  Identities=18%  Similarity=0.153  Sum_probs=165.2

Q ss_pred             CCCcHHHHHHHcCCHH----HHHHHHHhCCCCchhhhhc----cCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCccc
Q 037168           27 HDDTVLHMATYTKKSD----LVIKLLDELPDQSLDKMTR----QNKAGNTILHETATS---NHALPVADKVLRKAPGLLG   95 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~----~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~   95 (466)
                      .|+||||.||+.|+.+    ++++|++     .+.+++.    +|..|+||||+|+..   |+. +++++|++. +.+++
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~-----~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~-~~v~~Ll~~-g~~~~   73 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRW-----NSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVN-ACIMPLLQI-DKDSG   73 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHH-----HTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBC-TTHHHHHHH-HHHTT
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHH-----cCCCcccccccCCCCCCCHHHHHHHccccchH-HHHHHHHhc-CCccc
Confidence            4889999999999997    5566666     4456776    899999999999999   997 999999988 33333


Q ss_pred             -----------CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCC-------------CCChhhHHHHH
Q 037168           96 -----------MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND-------------KTNVLHIAILS  151 (466)
Q Consensus        96 -----------~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~-------------g~TpLh~A~~a  151 (466)
                                 .+|..|+||||+|+..|+.+++++|++.       +++++.+|..             |+||||   .|
T Consensus        74 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~~~~~~~~~~~~~g~tpL~---~A  143 (256)
T 2etb_A           74 NPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-------GADVHLRACGRFFQKHQGTCFYFGELPLS---LA  143 (256)
T ss_dssp             CSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCCSGGGSCCSSSCCCSCSSHHH---HH
T ss_pred             chhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCcccccccccccccccccCCCCHHH---HH
Confidence                       2457899999999999999999999998       5567777765             999999   77


Q ss_pred             hhcCcHHHHHHHHHH--CCCcccccccCCChHHHHHHH--cCChh-------HHHHHHhcCccccccc-------ccccC
Q 037168          152 LHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIK--YRQLE-------IFERVVQMEIPLRRLV-------RKIDY  213 (466)
Q Consensus       152 ~~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~--~~~~~-------iv~~Ll~~g~~~~~~~-------~~~d~  213 (466)
                      +..|+.++++.|++.  .+++++.+|..|+||||+|+.  +++.+       ++++|+++|++    +       +.+|.
T Consensus       144 ~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~----~~~~~~~~~~~d~  219 (256)
T 2etb_A          144 ACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR----LCPTVQLEEISNH  219 (256)
T ss_dssp             HHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HSTTCCGGGCCCT
T ss_pred             HHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC----cccccccccccCC
Confidence            789999999999986  789999999999999999999  78888       99999999998    6       89999


Q ss_pred             CCCCchhhhhccCcchhhhccC
Q 037168          214 NGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       214 ~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      +|+||||+|++.|+.++++.|.
T Consensus       220 ~g~tpL~~A~~~g~~~~v~~Ll  241 (256)
T 2etb_A          220 QGLTPLKLAAKEGKIEIFRHIL  241 (256)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCCCHHHHHHHhCCHHHHHHHH
Confidence            9999999999999999997773

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=100.00  E-value=1e-33  Score=269.65  Aligned_cols=203  Identities=18%  Similarity=0.151  Sum_probs=167.0

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh----ccCCCCChHHHHHHHc---CCcHHHHHHHHHhCCC
Q 037168           20 ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT----RQNKAGNTILHETATS---NHALPVADKVLRKAPG   92 (466)
Q Consensus        20 ~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~----~~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~   92 (466)
                      ..+..|..|+||||.||+.|+.++|+.|++.+.+ .+.+++    ..|..|+||||+|+..   |+. +++++|++.+..
T Consensus         5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~-~~v~~Ll~~ga~   82 (273)
T 2pnn_A            5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQR-SKKRLTDSEFKDPETGKTCLLKAMLNLHNGQN-DTIALLLDVARK   82 (273)
T ss_dssp             ------CCCHHHHHHHHHTTCSSTTTTHHHHHHH-SCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBC-HHHHHHHHHHHH
T ss_pred             cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhh-cccccCCcccccCcCCCCHHHHHHHHHhcCCh-HHHHHHHHhhcc
Confidence            3556799999999999999999999999985332 122333    4588999999999986   887 999999998321


Q ss_pred             ----------cccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC--------------CCCChhhHH
Q 037168           93 ----------LLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN--------------DKTNVLHIA  148 (466)
Q Consensus        93 ----------~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~--------------~g~TpLh~A  148 (466)
                                ....+|..|+||||+|+..|+.+++++|++.       +.+++.+|.              .|.||||  
T Consensus        83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~--  153 (273)
T 2pnn_A           83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-------GADVQAAANGDFFKKTKGRPGFYFGELPLS--  153 (273)
T ss_dssp             TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCBCSGGGSSCSSSCCCCSCBSHHH--
T ss_pred             ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCcCccccccccccccccccccCCCCHHH--
Confidence                      1223677999999999999999999999998       556666665              7999999  


Q ss_pred             HHHhhcCcHHHHHHHHHH--CCCcccccccCCChHHHHHHHcCC---------hhHHHHHHhcCccccc---ccccccCC
Q 037168          149 ILSLHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFERVVQMEIPLRR---LVRKIDYN  214 (466)
Q Consensus       149 ~~a~~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~g~~~~~---~~~~~d~~  214 (466)
                       .|+..|+.+++++|++.  .+++++.+|..|+||||+|+..|+         .+++++|+++|++.+.   .++.+|.+
T Consensus       154 -~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~  232 (273)
T 2pnn_A          154 -LAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRK  232 (273)
T ss_dssp             -HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred             -HHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCC
Confidence             77789999999999986  789999999999999999999998         7999999999988221   11469999


Q ss_pred             CCCchhhhhccCcchhhhcc
Q 037168          215 GNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       215 G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |+||||+|++.++.++++.|
T Consensus       233 g~TpL~~A~~~g~~~iv~~L  252 (273)
T 2pnn_A          233 GLTPLALAASSGKIGVLAYI  252 (273)
T ss_dssp             SCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCHHHHHHHhChHHHHHHH
Confidence            99999999999999999777

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=3.6e-33  Score=273.30  Aligned_cols=198  Identities=15%  Similarity=0.153  Sum_probs=159.9

Q ss_pred             hHHHHHHHHhCCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC---cHH
Q 037168            6 EQKVIELCRKVPDHALYV-FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH---ALP   81 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~~-~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~---~~~   81 (466)
                      .+++.+++.+. +.+++. .|.+|+||||+||..|+.++|++|++     ++++++.+|..|+||||+|+..|+   . +
T Consensus       109 ~~~~~~~l~~~-g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~-----~Gad~n~~d~~g~TpLh~A~~~g~~~~~-~  181 (327)
T 1sw6_A          109 LQEVNDAFPNT-QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK-----HGSNRLYGDNMGESCLVKAVKSVNNYDS-G  181 (327)
T ss_dssp             HHHHHHHCTTS-CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTBCCTTCCCHHHHHHHSSHHHHT-T
T ss_pred             HHHHHHHHHhc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHhcccccH-H
Confidence            45566666665 477888 89999999999999999999999999     567789999999999999999987   5 7


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHH----cCCHHHHHHHHhccC-------------CCCCCCcccccccCCCCCh
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAAR----YGKVDIFNFLAGKIS-------------GYDHATRLPFLHRNDKTNV  144 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~----~g~~~~v~~Ll~~~~-------------~~~~~~~~~~~~d~~g~Tp  144 (466)
                      +++.|++...++++.+|..|+||||+|+.    .|+.+++++|++...             .....+.+++.+|.+|+||
T Consensus       182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~  261 (327)
T 1sw6_A          182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS  261 (327)
T ss_dssp             CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CH
T ss_pred             HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCCh
Confidence            77888888667899999999999999999    899999999998632             1112257888899999999


Q ss_pred             hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      ||   .++.      +++|++.   +++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|++
T Consensus       262 L~---~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~  325 (327)
T 1sw6_A          262 IL---ENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD----PFIANKSGLRPVDFGAG  325 (327)
T ss_dssp             HH---HHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC----TTCCCTTSCCGGGGTCC
T ss_pred             hH---HHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHh
Confidence            99   4443      8889885   6899999999999999999999999999999999    99999999999999997


Q ss_pred             cC
Q 037168          225 KR  226 (466)
Q Consensus       225 ~~  226 (466)
                      .|
T Consensus       326 ~g  327 (327)
T 1sw6_A          326 LE  327 (327)
T ss_dssp             --
T ss_pred             cC
Confidence            64

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=4.8e-33  Score=256.40  Aligned_cols=200  Identities=16%  Similarity=0.191  Sum_probs=176.0

Q ss_pred             CCHHHHHHHHHhCCCCchhhhhc-cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHH
Q 037168           39 KKSDLVIKLLDELPDQSLDKMTR-QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIF  117 (466)
Q Consensus        39 g~~~~v~~Ll~~~~~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v  117 (466)
                      |+.+++++|++.++     +++. .|..|+||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|+..|+.+++
T Consensus         2 g~~~~i~~Ll~~g~-----~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v   74 (223)
T 2f8y_A            2 DAPAVISDFIYQGA-----SLHNQTDRTGETALHLAARYSRS-DAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVF   74 (223)
T ss_dssp             ---CCEETTEETTC-----CTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             CcHHHHHHHHHcCC-----CcccccCCCCCchHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence            67888999999544     4444 489999999999999996 999999998 778999999999999999999999999


Q ss_pred             HHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHH
Q 037168          118 NFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERV  197 (466)
Q Consensus       118 ~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~L  197 (466)
                      ++|++.++      .+++.+|.+|.||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|
T Consensus        75 ~~Ll~~~~------~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  144 (223)
T 2f8y_A           75 QILIRNRA------TDLDARMHDGTTPLI---LAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVDAAVVL  144 (223)
T ss_dssp             HHHHHBTT------SCTTCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHcCC------CCcccCCCCCCcHHH---HHHHhCcHHHHHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence            99999843      367788999999999   6778899999999999 8899999999999999999999999999999


Q ss_pred             HhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHH
Q 037168          198 VQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       198 l~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~  277 (466)
                      +++|++    ++.+|..|+||||+|++.++.++++.|                   +..+.+.+.+|..|+||++++.+.
T Consensus       145 l~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~  201 (223)
T 2f8y_A          145 LKNGAN----KDMQNNREETPLFLAAREGSYETAKVL-------------------LDHFANRDITDHMDRLPRDIAQER  201 (223)
T ss_dssp             HHTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHcCCC----CCCcCCCCcCHHHHHHHcCCHHHHHHH-------------------HHcCCCCccccccCCCHHHHHHHh
Confidence            999998    899999999999999999999988666                   223445688999999999999876


Q ss_pred             h
Q 037168          278 N  278 (466)
Q Consensus       278 ~  278 (466)
                      .
T Consensus       202 ~  202 (223)
T 2f8y_A          202 M  202 (223)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.98  E-value=1.3e-31  Score=242.79  Aligned_cols=183  Identities=19%  Similarity=0.178  Sum_probs=168.0

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      .+|+.+.+..++.+. ..+++..|.+|.||||+|++.|+.+++++|++     .+++++.+|..|.||||+|+..|+. +
T Consensus        14 ~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~l~~A~~~~~~-~   86 (201)
T 3hra_A           14 NQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALID-----RGADINLQNSISDSPYLYAGAQGRT-E   86 (201)
T ss_dssp             HTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-H
T ss_pred             HhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCH-H
Confidence            368889999998876 45788899999999999999999999999999     5667889999999999999999996 9


Q ss_pred             HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCc-----
Q 037168           82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGC-----  156 (466)
Q Consensus        82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~-----  156 (466)
                      ++++|++..+.+++.+|..|.||||+|+..|+.+++++|++.+.      .+++.+|.+|+||||   .|+..++     
T Consensus        87 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~~g~t~L~---~A~~~~~~~~~~  157 (201)
T 3hra_A           87 ILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR------EDIDFQNDFGYTALI---EAVGLREGNQLY  157 (201)
T ss_dssp             HHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC------CCTTCCCTTSCCHHH---HHHHSSCCSHHH
T ss_pred             HHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC------CCcCCCCCCCCCHHH---HHHHhccchhhH
Confidence            99999988888999999999999999999999999999999832      678899999999999   5566666     


Q ss_pred             HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcC
Q 037168          157 IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQME  201 (466)
Q Consensus       157 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g  201 (466)
                      .++++.|++ .+++++.+|..|+||||+|+.+|+.+++++|+++|
T Consensus       158 ~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          158 QDIVKLLME-NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            999999998 89999999999999999999999999999999876

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=4.1e-32  Score=256.46  Aligned_cols=194  Identities=16%  Similarity=0.125  Sum_probs=164.3

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHH----hCCCCchhhhhcc----CCCCChHHHHHH---HcCCcHHHHHHHHHhCC--
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLD----ELPDQSLDKMTRQ----NKAGNTILHETA---TSNHALPVADKVLRKAP--   91 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~----d~~G~TpLh~Aa---~~g~~~~~v~~Ll~~~~--   91 (466)
                      +..|+|+||.||+.|+.+.++.|++    .+.     +++..    |..|.||||+|+   +.|+. +++++|++.+.  
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~-----~~~~~~~~~~~~g~t~L~~A~~~~~~g~~-~~v~~Ll~~g~~~   75 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKK-----RLTDEEFREPSTGKTCLPKALLNLSAGRN-DTIPILLDIAEKT   75 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTC-----CTTSGGGSCTTTCCCHHHHHHTSCBTTBC-THHHHHHHHHHHT
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCC-----CcchhhhhccCCCCcHHHHHHHHhhcCCH-HHHHHHHHhcccc
Confidence            5678999999999999996655555    443     34433    478999999999   67997 99999999731  


Q ss_pred             --------CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc--------------CCCCChhhHHH
Q 037168           92 --------GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR--------------NDKTNVLHIAI  149 (466)
Q Consensus        92 --------~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d--------------~~g~TpLh~A~  149 (466)
                              ...+..|..|+||||+|+..|+.+++++|++.       +++++.+|              ..|+||||   
T Consensus        76 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~---  145 (260)
T 3jxi_A           76 GNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-------GADVHAQARGRFFQPKDEGGYFYFGELPLS---  145 (260)
T ss_dssp             TCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCEECCCSSSCCCCSCCSCSSHHH---
T ss_pred             cchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-------CCCcCccccccccCcccccccccCCCCHHH---
Confidence                    33556677999999999999999999999998       55667776              68999999   


Q ss_pred             HHhhcCcHHHHHHHHHH--CCCcccccccCCChHHHHHHHcCC---------hhHHHHHHhcCccccc---ccccccCCC
Q 037168          150 LSLHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFERVVQMEIPLRR---LVRKIDYNG  215 (466)
Q Consensus       150 ~a~~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~g~~~~~---~~~~~d~~G  215 (466)
                      .|+..|+.++++.|++.  .+++++.+|..|+||||+|+..++         .+++++|+++|++...   +.+.+|.+|
T Consensus       146 ~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g  225 (260)
T 3jxi_A          146 LAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG  225 (260)
T ss_dssp             HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTS
T ss_pred             HHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCC
Confidence            77789999999999985  789999999999999999999887         6999999999988210   117899999


Q ss_pred             CCchhhhhccCcchhhhcc
Q 037168          216 NTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       216 ~TpLHlAa~~~~~~~~~~l  234 (466)
                      +||||+|++.|+.++++.|
T Consensus       226 ~tpL~~A~~~g~~~~v~~L  244 (260)
T 3jxi_A          226 LSPLMMAAKTGKIGIFQHI  244 (260)
T ss_dssp             CCHHHHHHHTTCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHH
Confidence            9999999999999999777

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.97  E-value=4.2e-31  Score=259.39  Aligned_cols=196  Identities=16%  Similarity=0.144  Sum_probs=152.1

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc-----hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCc
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQS-----LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGL   93 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~   93 (466)
                      .+++..|..|.||||+|+..|+.++++.|++.+.+..     .......+..|.||||+|+..|+. +++++|+++.+++
T Consensus       116 ~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~-~~v~~LL~~~gad  194 (337)
T 4g8k_A          116 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV-EVLKILLDEMGAD  194 (337)
T ss_dssp             CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH-HHHHHHHHHSCCC
T ss_pred             chhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH-HHHHHHHhccCCC
Confidence            3456677888888888888888888888888654421     223445567788888888888886 8888888877888


Q ss_pred             ccCcCCCCChHHHHHHHcCC----HHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCC
Q 037168           94 LGMRNNNGETALLRAARYGK----VDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQ  169 (466)
Q Consensus        94 ~~~~d~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~  169 (466)
                      ++.+|..|.||+|.++..++    .+++++|+++       |++++.+|.+|+||||   .|+..|+.++++.|++..+.
T Consensus       195 ~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-------gad~n~~d~~g~t~L~---~a~~~~~~~~v~~Ll~~~~~  264 (337)
T 4g8k_A          195 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-------GADVNVRGERGKTPLI---LAVEKKHLGLVQRLLEQEHI  264 (337)
T ss_dssp             TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-------TCCTTCCCGGGCCHHH---HHHHTTCHHHHHHHHTSTTC
T ss_pred             cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-------CCCCCCcCCCCCCHHH---HHHHhhhhHHHHHHHHhcCC
Confidence            88888888888888776544    3577888887       6677888888888888   66678888888888876778


Q ss_pred             cccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          170 AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       170 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      +++.+|.+|+||||+|+++|+.+++++|+++|++    +|.     .||||+|++.++.+++++|
T Consensus       265 ~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd----~n~-----~~~L~~A~~~~~~~iv~~L  320 (337)
T 4g8k_A          265 EINDTDSDGKTALLLAVELKLKKIAELLCKRGAS----TDC-----GDLVMTARRNYDHSLVKVL  320 (337)
T ss_dssp             CTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS----STT-----CCHHHHHHHTTCHHHHHHH
T ss_pred             cccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCC-----CCHHHHHHHcCCHHHHHHH
Confidence            8888888888888888888888888888888877    443     4588888888888888766

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.97  E-value=5.2e-31  Score=244.40  Aligned_cols=187  Identities=19%  Similarity=0.206  Sum_probs=164.2

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++.+. +.+++..|.+|+||||+|+..|+.+++++|++.+++......+.+|..|.||||+|+..|+. ++
T Consensus        13 ~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~   90 (232)
T 2rfa_A           13 ENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNV-NL   90 (232)
T ss_dssp             TTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCH-HH
T ss_pred             cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCH-HH
Confidence            57778888777764 47789999999999999999999999999999765432223367788999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCC-------------CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHH
Q 037168           83 ADKVLRKAPGLLGMRNN-------------NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAI  149 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~-------------~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~  149 (466)
                      +++|+++ +.+++.++.             .|+||||+|+..|+.+++++|+++       +++++.+|.+|+||||   
T Consensus        91 v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~t~L~---  159 (232)
T 2rfa_A           91 VRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-------GADIRAQDSLGNTVLH---  159 (232)
T ss_dssp             HHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---
T ss_pred             HHHHHhC-CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---
Confidence            9999998 667777765             799999999999999999999998       6788999999999999   


Q ss_pred             HHhhcCcHHHH----HHHHHHCCCcc------cccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          150 LSLHFGCIEIV----KDILSVYPQAV------EHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       150 ~a~~~g~~~~v----~~Ll~~~~~~~------~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      .|+..|+.+++    +.|++ .+.+.      +.+|..|+||||+|+.+|+.+++++|+++|.+
T Consensus       160 ~A~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~  222 (232)
T 2rfa_A          160 ILILQPNKTFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH  222 (232)
T ss_dssp             HHHTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHcCChHHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            77789999988    88888 66666      68999999999999999999999999999876

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.97  E-value=3e-32  Score=253.72  Aligned_cols=204  Identities=18%  Similarity=0.184  Sum_probs=174.1

Q ss_pred             cchHHHHHHHHhCCC--ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            4 QDEQKVIELCRKVPD--HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         4 g~~~~v~~ll~~~~~--~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      |+.+.+..++.....  .+++..|..|.||||+|+..|+.+++++|++     .+++++.+|..|.||||+|+..|+. +
T Consensus        19 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~   92 (236)
T 1ikn_D           19 EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG-----AGCDPELRDFRGNTPLHLACEQGCL-A   92 (236)
T ss_dssp             TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCS-----CCCCSCCCCTTCCCHHHHHHHHTCH-H
T ss_pred             CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH-H
Confidence            444444444444322  3678899999999999999999999999999     5567888999999999999999996 9


Q ss_pred             HHHHHHHhCC-----CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcC
Q 037168           82 VADKVLRKAP-----GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFG  155 (466)
Q Consensus        82 ~v~~Ll~~~~-----~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g  155 (466)
                      +++.|++.+.     ..++..|..|.||||+|+..|+.+++++|++.       +.+++.+|. .|+||||   .|+..|
T Consensus        93 ~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~~g~tpL~---~A~~~~  162 (236)
T 1ikn_D           93 SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-------GADVNAQEPCNGRTALH---LAVDLQ  162 (236)
T ss_dssp             HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-------TCCTTCCCTTTCCCHHH---HHHHTT
T ss_pred             HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCCHHH---HHHHcC
Confidence            9999999853     33688899999999999999999999999998       678888887 9999999   777899


Q ss_pred             cHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccC
Q 037168          156 CIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR  226 (466)
Q Consensus       156 ~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~  226 (466)
                      +.++++.|++ +|++++.+|..|+||||+|+.+|+.+++++|+++|++.  .....+.+|.||.+.+....
T Consensus       163 ~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~~  230 (236)
T 1ikn_D          163 NPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN--LQMLPESEDEESYDTESEFT  230 (236)
T ss_dssp             CHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG--GSSCCCCCTTTCCCCC----
T ss_pred             CHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh--hhcCCccchHHHHhhhcccc
Confidence            9999999999 79999999999999999999999999999999999872  24578999999999887543

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.97  E-value=4.3e-31  Score=233.12  Aligned_cols=153  Identities=22%  Similarity=0.270  Sum_probs=144.6

Q ss_pred             hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168           68 TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI  147 (466)
Q Consensus        68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~  147 (466)
                      ++|+.||+.|+. ++|+.|++. |++++.+|.+|+||||+|+..++.+++++|++.       +.+++.+|.+|+|||| 
T Consensus         6 ~~L~~Aa~~G~~-~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~-------gad~~~~d~~g~TpLh-   75 (169)
T 4gpm_A            6 KRLIEAAENGNK-DRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISK-------GADVNAKDSDGRTPLH-   75 (169)
T ss_dssp             HHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH-
T ss_pred             HHHHHHHHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccchhhhccCCCCHHH-
Confidence            579999999997 999999998 788999999999999999999999999999998       6788999999999999 


Q ss_pred             HHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          148 AILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       148 A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                        .|+..|+.++++.|++ .++++|.+|.+|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|++.++
T Consensus        76 --~A~~~g~~~~v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~g~  148 (169)
T 4gpm_A           76 --HAAENGHKEVVKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD----VNTSDSDGRTPLDLAREHGN  148 (169)
T ss_dssp             --HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTC
T ss_pred             --HHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCC
Confidence              7778999999999998 8999999999999999999999999999999999998    99999999999999999999


Q ss_pred             chhhhccCCh
Q 037168          228 DYVAEKMEGP  237 (466)
Q Consensus       228 ~~~~~~l~~~  237 (466)
                      .+++++|...
T Consensus       149 ~~iv~~Ll~~  158 (169)
T 4gpm_A          149 EEVVKLLEKQ  158 (169)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHHC
Confidence            9999887443

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.97  E-value=3e-32  Score=266.76  Aligned_cols=231  Identities=14%  Similarity=0.149  Sum_probs=172.0

Q ss_pred             CccchHHHHHHHHhCCCccccc---------------cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhc-cCCC
Q 037168            2 IKQDEQKVIELCRKVPDHALYV---------------FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTR-QNKA   65 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~---------------~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~d~~   65 (466)
                      ..|+.+.|..++.++-+...+.               ......+.+|.|+..+..++++.|++     .+.+++. +|..
T Consensus        56 ~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-----~g~dvn~~~d~~  130 (327)
T 1sw6_A           56 DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPN-----TQLNLNIPVDEH  130 (327)
T ss_dssp             CHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTT-----SCCCSCSCCSTT
T ss_pred             cCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHh-----cCCCcccccCCC
Confidence            3477788888887762211100               11112234588888888888888888     5677888 8999


Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCC---HHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGK---VDIFNFLAGKISGYDHATRLPFLHRNDKT  142 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~  142 (466)
                      |+||||+|+..|+. +++++|+++ +++++.+|.+|+||||+|+..|+   .++++.|++...      .+++.+|.+|+
T Consensus       131 g~TpLh~Aa~~g~~-~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~------~~~~~~d~~g~  202 (327)
T 1sw6_A          131 GNTPLHWLTSIANL-ELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY------PCLILEDSMNR  202 (327)
T ss_dssp             CCCHHHHHHHTTCH-HHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG------GGGGEECTTCC
T ss_pred             CCcHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh------ccccCCCCCCC
Confidence            99999999999996 999999998 78899999999999999999998   788888888742      46889999999


Q ss_pred             ChhhHHHHHh-hcCcHHHHHHHHHHC-------------------CCcccccccCCChHHHHHHHcCChhHHHHHHhcCc
Q 037168          143 NVLHIAILSL-HFGCIEIVKDILSVY-------------------PQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEI  202 (466)
Q Consensus       143 TpLh~A~~a~-~~g~~~~v~~Ll~~~-------------------~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~  202 (466)
                      ||||+|+... ..|+.++++.|++..                   +.+++.+|..|+||||.|+.      +++|++++ 
T Consensus       203 tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~-  275 (327)
T 1sw6_A          203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM-  275 (327)
T ss_dssp             CHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT-
T ss_pred             CHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC-
Confidence            9999543211 189999999999852                   88999999999999999985      89999873 


Q ss_pred             ccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHH
Q 037168          203 PLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAI  276 (466)
Q Consensus       203 ~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~  276 (466)
                           +|.+|.+|+||||+|++.++.++++.|                   +..+.+++.+|++|+||++++.+
T Consensus       276 -----~n~~d~~G~TpLh~A~~~g~~~~v~~L-------------------l~~Gad~~~~d~~G~TpL~~A~~  325 (327)
T 1sw6_A          276 -----LNAQDSNGDTCLNIAARLGNISIVDAL-------------------LDYGADPFIANKSGLRPVDFGAG  325 (327)
T ss_dssp             -----TTCCCTTSCCHHHHHHHHCCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGTCC
T ss_pred             -----CCCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHh
Confidence                 889999999999999999999998777                   33466789999999999998754

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.97  E-value=1.2e-30  Score=230.69  Aligned_cols=170  Identities=13%  Similarity=0.070  Sum_probs=151.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR  107 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~  107 (466)
                      +.||||.|+..|+.++++.|++.++    ..++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||||+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~   75 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGD----NLVNKPDERGFTPLIWASAFGEI-ETVRFLLEW-GADPHILAKERESALSL   75 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCS----GGGGCCCTTSCCHHHHHHHTTCH-HHHHHHHHH-TCCTTCCCTTCCCHHHH
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCc----ccccCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCchhhcccCCCHHHH
Confidence            5789999999999999999999643    34788999999999999999996 999999998 67899999999999999


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      |+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.
T Consensus        76 A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~  144 (172)
T 3v30_A           76 ASTGGYTDIVGLLLER-------DVDINIYDWNGGTPLL---YAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVA  144 (172)
T ss_dssp             HHHTTCHHHHHHHHTT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHH
Confidence            9999999999999998       6788899999999999   7778899999999998 899999999999999999999


Q ss_pred             cCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168          188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTI  218 (466)
Q Consensus       188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp  218 (466)
                      +|+.+++++|++++++    +..++..|.||
T Consensus       145 ~~~~~~~~~L~~~~~~----~~~~~~~~~~p  171 (172)
T 3v30_A          145 LGYRKVQQVIENHILK----LFQSNLVPADP  171 (172)
T ss_dssp             HTCHHHHHHHHHHHHH----HSCC-------
T ss_pred             hCcHHHHHHHHHHHHH----HhcccCCCCCC
Confidence            9999999999999988    88888888887

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.97  E-value=6.4e-31  Score=252.27  Aligned_cols=200  Identities=16%  Similarity=0.182  Sum_probs=174.9

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.+..++..+  .+++..  +|+||||+|+..|+.+++++|++     .+++++.+|..|.||||+|+..|+. ++
T Consensus        41 ~g~~~~v~~Ll~~g--~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~t~L~~A~~~g~~-~~  110 (285)
T 3kea_A           41 DNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLEDTKIVKILLF-----SGLDDSQFDDKGNTALYYAVDSGNM-QT  110 (285)
T ss_dssp             TTCHHHHHHHHHTT--GGGSCC--TTCCHHHHHTTSSSCHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HH
T ss_pred             cCCHHHHHHHHhCC--CCCCCC--CCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCcHHHHHHHcCCH-HH
Confidence            46777777777664  556655  59999999999999999999999     5667889999999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCC-ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcCcHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNG-ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFGCIEIV  160 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G-~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v  160 (466)
                      +++|+++ +.+++.+|..| .||||+|+..|+.+++++|++.++       +.  .+. .|.||||   .|+..|+.+++
T Consensus       111 v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~-------~~--~~~~~g~t~L~---~A~~~g~~~~v  177 (285)
T 3kea_A          111 VKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-------ST--FDLAILLSCIH---ITIKNGHVDMM  177 (285)
T ss_dssp             HHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC-------TT--CCCSTHHHHHH---HHHHTTCHHHH
T ss_pred             HHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-------cc--ccccCCccHHH---HHHHcChHHHH
Confidence            9999999 78899999999 899999999999999999999843       22  233 8999999   77789999999


Q ss_pred             HHHHHHCCCcccccccCCChH-HHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCCh
Q 037168          161 KDILSVYPQAVEHIDDEGRNI-LHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGP  237 (466)
Q Consensus       161 ~~Ll~~~~~~~~~~d~~G~t~-Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~  237 (466)
                      +.|++ .+++++.+|..|+|| ||+|+.+|+.+++++|+++|++    ++.+|       +.|+..++.++++.|.+.
T Consensus       178 ~~Ll~-~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad----~~~~~-------~~a~~~~~~~iv~~Ll~~  243 (285)
T 3kea_A          178 ILLLD-YMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN----IYSAN-------LENVLLDDAEIAKMIIEK  243 (285)
T ss_dssp             HHHHH-HHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC----STTTT-------GGGGTTTCHHHHHHHHHH
T ss_pred             HHHHH-cCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC----CCCCC-------hhhhhcCCHHHHHHHHHc
Confidence            99999 689999999999998 9999999999999999999998    77777       467778888888777433

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.97  E-value=1.5e-30  Score=234.44  Aligned_cols=163  Identities=20%  Similarity=0.228  Sum_probs=133.5

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN  100 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~  100 (466)
                      .+.+|..|+||||+|+..|+.+++++|++     .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..
T Consensus        28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~  100 (192)
T 2rfm_A           28 RNYRDSYNRTPLMVACMLGMENAIDKLVE-----NFDKLEDKDIEGSTALIWAVKNNRL-GIAEKLLSK-GSNVNTKDFS  100 (192)
T ss_dssp             HTCCCTTCCCHHHHHHHHTCGGGHHHHHH-----HHCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHH-TCCTTCCCTT
T ss_pred             HhCcCCCCCCHHHHHHHcCCHHHHHHHHH-----hccccccccccCccHHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCC
Confidence            56678888888888888888888888888     4556777888888888888888885 888888887 5668888888


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCCh
Q 037168          101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRN  180 (466)
Q Consensus       101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t  180 (466)
                      |+||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+|
T Consensus       101 g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t  169 (192)
T 2rfm_A          101 GKTPLMWSIIFGYSEMSYFLLEH-------GANVNDRNLEGETPLI---VASKYGRSEIVKKLLE-LGADISARDLTGLT  169 (192)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHT-------TCCSSCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCBCTTSCB
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCcCCCCCC
Confidence            88888888888888888888887       5677778888888888   6667788888888887 68888888888888


Q ss_pred             HHHHHHHcCChhHHHHHHhcC
Q 037168          181 ILHVAIKYRQLEIFERVVQME  201 (466)
Q Consensus       181 ~Lh~A~~~~~~~iv~~Ll~~g  201 (466)
                      |||+|+.+|+.+++++|+++|
T Consensus       170 ~l~~A~~~~~~~~v~~Ll~~~  190 (192)
T 2rfm_A          170 AEASARIFGRQEVIKIFTEVR  190 (192)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHhCcHHHHHHHHhcc
Confidence            888888888888888888764

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=3.4e-31  Score=252.99  Aligned_cols=191  Identities=17%  Similarity=0.184  Sum_probs=173.7

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      +..+.+++|.|+..|+.+.++.+++.+.   ...++.+|.+|+||||+|+..|+. ++++.|++.+..+++.+|..|+||
T Consensus        73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~---~~~~n~~d~~g~T~Lh~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~g~tp  148 (276)
T 4hbd_A           73 RLACRSDAHPELVRRHLVTFRAMSARLL---DYVVNIADSNGNTALHYSVSHANF-PVVQQLLDSGVCKVDKQNRAGYSP  148 (276)
T ss_dssp             HHHHSTTCCHHHHHHHHHHHHHHCHHHH---HHHHTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTSCCCTTCCCTTSCCH
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHH---hhcCcCCCCCCCCHHHHHHHCCCH-HHHHHHHHCCCCcCCCCCCCCCCH
Confidence            3346789999999999999999998532   235899999999999999999997 999999999666899999999999


Q ss_pred             HHHHH-----HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168          105 LLRAA-----RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR  179 (466)
Q Consensus       105 Lh~Aa-----~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~  179 (466)
                      ||+|+     ..++.+++++|++.       +.+.+..|..|+||||   .|+..|+.++++.|++ .+++++.+|..|+
T Consensus       149 L~~a~~~~~~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~tpLh---~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~  217 (276)
T 4hbd_A          149 IMLTALATLKTQDDIETVLQLFRL-------GNINAKASQAGQTALM---LAVSHGRVDVVKALLA-CEADVNVQDDDGS  217 (276)
T ss_dssp             HHHGGGCCCCSHHHHHHHHHHHHH-------SCTTCCCTTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSC
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHc-------CCCccccCCCCCCHHH---HHHHcCCHHHHHHHHh-CCCCCCCCCCCCC
Confidence            99999     66899999999998       5567778889999999   7778999999999999 8999999999999


Q ss_pred             hHHHHHHHcCChhHHHHHHh-cCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          180 NILHVAIKYRQLEIFERVVQ-MEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       180 t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      ||||+|+.+|+.+++++|++ .|++    ++.+|.+|+||||+|++.|+.++++.|
T Consensus       218 TpLh~A~~~g~~~iv~~Ll~~~gad----~~~~d~~g~TpL~~A~~~g~~~iv~~L  269 (276)
T 4hbd_A          218 TALMCACEHGHKEIAGLLLAVPSCD----ISLTDRDGSTALMVALDAGQSEIASML  269 (276)
T ss_dssp             CHHHHHHHHTCHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHhcCCCC----CcCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence            99999999999999999999 8988    899999999999999999999998666

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.97  E-value=2.5e-32  Score=253.57  Aligned_cols=201  Identities=15%  Similarity=0.091  Sum_probs=168.4

Q ss_pred             HHHHHhCCCc-cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHH
Q 037168           10 IELCRKVPDH-ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR   88 (466)
Q Consensus        10 ~~ll~~~~~~-~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~   88 (466)
                      +.+++++.+. ..+..+.+|.||||.|+..|+.++++.|++.     +.+++.+|..|+||||+|+..|+. +++++|++
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~   75 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE-----MNDPSQPNEEGITALHNAICGANY-SIVDFLIT   75 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH-----SSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred             eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc-----CCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHH
Confidence            4455555322 2345677788999999999999999999994     556888999999999999999996 99999999


Q ss_pred             hCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHH--hhcCcHHHHHHHHH
Q 037168           89 KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILS--LHFGCIEIVKDILS  165 (466)
Q Consensus        89 ~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a--~~~g~~~~v~~Ll~  165 (466)
                      . +.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.++ .+|+||||   .|  +..|+.+++++|++
T Consensus        76 ~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~g~tpL~---~A~a~~~~~~~~v~~Ll~  144 (229)
T 2vge_A           76 A-GANVNSPDSHGWTPLHCAASCNDTVICMALVQH-------GAAIFATTLSDGATAFE---KCDPYREGYADCATYLAD  144 (229)
T ss_dssp             T-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-------TCCTTCCCSSTTCCTGG---GCCTTSTTHHHHHHHHHH
T ss_pred             C-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCcccccCCCCCCHHH---HHHHHhcChHHHHHHHHH
Confidence            8 788999999999999999999999999999998       66788876 69999999   66  89999999999999


Q ss_pred             HCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhc
Q 037168          166 VYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEK  233 (466)
Q Consensus       166 ~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~  233 (466)
                       .+++++.+|..|.|++|.++..+.   .++|++.|++  ..++.+|.+|+||||+|++.|+.++++.
T Consensus       145 -~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~--~~~~~~d~~G~TpL~~A~~~g~~~~v~~  206 (229)
T 2vge_A          145 -VEQSMGLMNSGAVYALWDYSAEFG---DELSFREGES--VTVLRRDGPEETDWWWAALHGQEGYVPR  206 (229)
T ss_dssp             -HHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCE--EEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred             -cCCCcccccCCchHHHHHHhhccc---cccCcccccc--ccccccCCCcccHHHHHHHcCCcceeeh
Confidence             788999999999999997665543   3567888876  2378899999999999999999998854

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.97  E-value=3.6e-30  Score=231.91  Aligned_cols=161  Identities=22%  Similarity=0.177  Sum_probs=151.1

Q ss_pred             hhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccc
Q 037168           57 DKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFL  136 (466)
Q Consensus        57 ~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~  136 (466)
                      ..++.+|..|+||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.
T Consensus        26 ~~~n~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~   96 (192)
T 2rfm_A           26 FLRNYRDSYNRTPLMVACMLGME-NAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK-------GSNVNT   96 (192)
T ss_dssp             HHHTCCCTTCCCHHHHHHHHTCG-GGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TCCTTC
T ss_pred             HHHhCcCCCCCCHHHHHHHcCCH-HHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHC-------CCCCCC
Confidence            35678999999999999999997 999999998 677999999999999999999999999999998       667888


Q ss_pred             ccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC
Q 037168          137 HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN  216 (466)
Q Consensus       137 ~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~  216 (466)
                      +|..|.||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+
T Consensus        97 ~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~  168 (192)
T 2rfm_A           97 KDFSGKTPLM---WSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD----ISARDLTGL  168 (192)
T ss_dssp             CCTTSCCHHH---HHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSC
T ss_pred             CCCCCCcHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCC
Confidence            9999999999   6778899999999998 8999999999999999999999999999999999998    899999999


Q ss_pred             CchhhhhccCcchhhhcc
Q 037168          217 TIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       217 TpLHlAa~~~~~~~~~~l  234 (466)
                      ||||+|+..++.++++.|
T Consensus       169 t~l~~A~~~~~~~~v~~L  186 (192)
T 2rfm_A          169 TAEASARIFGRQEVIKIF  186 (192)
T ss_dssp             BHHHHHHHTTCHHHHHHH
T ss_pred             CHHHHHHHhCcHHHHHHH
Confidence            999999999999988666

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.97  E-value=4.6e-30  Score=224.37  Aligned_cols=160  Identities=19%  Similarity=0.179  Sum_probs=145.4

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168           26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL  105 (466)
Q Consensus        26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL  105 (466)
                      +...||||.|++.|+.++++.|++     .+.+++.+|..|+||||+|+. |+. +++++|++. +.+++.+|..|+|||
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~t~L~~A~~-~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L   74 (162)
T 1ihb_A            3 EPWGNELASAAARGDLEQLTSLLQ-----NNVNVNAQNGFGRTALQVMKL-GNP-EIARRLLLR-GANPDLKDRTGFAVI   74 (162)
T ss_dssp             --CHHHHHHHHHHTCHHHHHHHTT-----SCCCTTCCCTTSCCHHHHCCS-SCH-HHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred             chHhhHHHHHHHcCCHHHHHHHHh-----CCCCccccCccCccHHHHHHc-CcH-HHHHHHHHc-CCCCCCCCCCCCCHH
Confidence            456899999999999999999998     456688899999999999998 886 999999998 778999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA  185 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A  185 (466)
                      |+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++.....++.+|..|+||||+|
T Consensus        75 ~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A  144 (162)
T 1ihb_A           75 HDAARAGFLDTLQTLLEF-------QADVNIEDNEGNLPLH---LAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLA  144 (162)
T ss_dssp             HHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHH
Confidence            999999999999999998       6788899999999999   777899999999999965555799999999999999


Q ss_pred             HHcCChhHHHHHHhcCcc
Q 037168          186 IKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       186 ~~~~~~~iv~~Ll~~g~~  203 (466)
                      +.+|+.+++++|+++|++
T Consensus       145 ~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          145 RLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHTTCHHHHHHHHHTC--
T ss_pred             HHcCCHHHHHHHHHhCCC
Confidence            999999999999999975

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.97  E-value=9.8e-30  Score=223.64  Aligned_cols=159  Identities=15%  Similarity=0.097  Sum_probs=148.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL  106 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh  106 (466)
                      +|.||||.|+..|+.++++.|++.     +.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|.||||
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~   74 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQ-----ENVINHTDEEGFTPLMWAAAHGQI-AVVEFLLQN-GADPQLLGKGRESALS   74 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHH-----SSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCCHHH
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHc-----CCCcCCCCCCCCCHHHHHHHCCCH-HHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence            589999999999999999999995     456888999999999999999996 999999998 7789999999999999


Q ss_pred             HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHH
Q 037168          107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAI  186 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~  186 (466)
                      +|+..|+.+++++|++.       +.+++.+|.+|.||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+
T Consensus        75 ~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~  143 (167)
T 3v31_A           75 LACSKGYTDIVKMLLDC-------GVDVNEYDWNGGTPLL---YAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAV  143 (167)
T ss_dssp             HHHHHTCHHHHHHHHHH-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHH
T ss_pred             HHHHcCCHHHHHHHHHC-------CCCCCcCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence            99999999999999998       6788889999999999   7778899999999998 89999999999999999999


Q ss_pred             HcCChhHHHHHHhcCcc
Q 037168          187 KYRQLEIFERVVQMEIP  203 (466)
Q Consensus       187 ~~~~~~iv~~Ll~~g~~  203 (466)
                      .+|+.+++++|++++.+
T Consensus       144 ~~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A          144 ALGYRSVQQVIESHLLK  160 (167)
T ss_dssp             HHTCHHHHHHHHHHHHH
T ss_pred             HcCcHHHHHHHHHHHHH
Confidence            99999999999998765

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.96  E-value=3.6e-30  Score=242.59  Aligned_cols=182  Identities=19%  Similarity=0.173  Sum_probs=156.8

Q ss_pred             ccchHHH---HHHHHhCCCccccc----cCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCchhhhh-----------c
Q 037168            3 KQDEQKV---IELCRKVPDHALYV----FTIHDDTVLHMATYT---KKSDLVIKLLDELPDQSLDKMT-----------R   61 (466)
Q Consensus         3 ~g~~~~v---~~ll~~~~~~~~~~----~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~-----------~   61 (466)
                      .|+.+.|   .+++.+. +.+++.    .|.+|+||||+|+..   |+.+++++|++.     +++++           .
T Consensus        12 ~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-----g~~~~~~~~~~~~~~~~   85 (256)
T 2etb_A           12 RGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-----DKDSGNPKPLVNAQCTD   85 (256)
T ss_dssp             HTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-----HHHTTCSSCGGGCCCCS
T ss_pred             cCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-----CCcccchhhhccccccc
Confidence            4666643   3444344 366776    899999999999999   999999999995     34433           2


Q ss_pred             cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC-------------CChHHHHHHHcCCHHHHHHHHh---ccC
Q 037168           62 QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN-------------GETALLRAARYGKVDIFNFLAG---KIS  125 (466)
Q Consensus        62 ~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~-------------G~tpLh~Aa~~g~~~~v~~Ll~---~~~  125 (466)
                      +|..|.||||+|+..|+. +++++|++. +.+++.+|..             |+||||+|+..|+.+++++|++   .  
T Consensus        86 ~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~--  161 (256)
T 2etb_A           86 EFYQGHSALHIAIEKRSL-QCVKLLVEN-GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ--  161 (256)
T ss_dssp             TTTTTCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC--
T ss_pred             ccccCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc--
Confidence            447899999999999996 999999998 7789999887             9999999999999999999999   6  


Q ss_pred             CCCCCCcccccccCCCCChhhHHHHHhh--cCcHH-------HHHHHHHHCCCcc-------cccccCCChHHHHHHHcC
Q 037168          126 GYDHATRLPFLHRNDKTNVLHIAILSLH--FGCIE-------IVKDILSVYPQAV-------EHIDDEGRNILHVAIKYR  189 (466)
Q Consensus       126 ~~~~~~~~~~~~d~~g~TpLh~A~~a~~--~g~~~-------~v~~Ll~~~~~~~-------~~~d~~G~t~Lh~A~~~~  189 (466)
                           +++++.+|.+|+||||+   |+.  .++.+       +++.|++ .++++       +.+|..|+||||+|+.+|
T Consensus       162 -----ga~~n~~d~~g~TpLh~---A~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g  232 (256)
T 2etb_A          162 -----PASLEATDSLGNTVLHA---LVMIADNSPENSALVIHMYDGLLQ-MGARLCPTVQLEEISNHQGLTPLKLAAKEG  232 (256)
T ss_dssp             -----CCCTTCCCTTSCCHHHH---HHHHCCSCHHHHHHHHHHHHHHHH-HHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred             -----CCCcCccCCCCCCHHHH---HHHcccCCchhhHHHHHHHHHHHH-cCCCcccccccccccCCCCCCHHHHHHHhC
Confidence                 67899999999999995   445  78888       9999998 68888       899999999999999999


Q ss_pred             ChhHHHHHHhcCcc
Q 037168          190 QLEIFERVVQMEIP  203 (466)
Q Consensus       190 ~~~iv~~Ll~~g~~  203 (466)
                      +.+++++|+++|.+
T Consensus       233 ~~~~v~~Ll~~g~~  246 (256)
T 2etb_A          233 KIEIFRHILQREFS  246 (256)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHhCCCC
Confidence            99999999999876

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.96  E-value=2e-30  Score=247.70  Aligned_cols=183  Identities=22%  Similarity=0.244  Sum_probs=163.0

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHH-----HcC
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETA-----TSN   77 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa-----~~g   77 (466)
                      .|+.+.+..++....+..++..|.+|+||||+||..|+.++++.|++.++    .+++..|..|.||||+|+     ..+
T Consensus        86 ~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~g~tpL~~a~~~~~~~~~  161 (276)
T 4hbd_A           86 RRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGV----CKVDKQNRAGYSPIMLTALATLKTQD  161 (276)
T ss_dssp             HHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC----CCTTCCCTTSCCHHHHGGGCCCCSHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC----CcCCCCCCCCCCHHHHHHHHHhhhhh
Confidence            45566666666665444588899999999999999999999999999543    268899999999999999     556


Q ss_pred             CcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcH
Q 037168           78 HALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCI  157 (466)
Q Consensus        78 ~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~  157 (466)
                      +. ++++.|++. +...+..|..|+||||+|+..|+.+++++|++.       +++++.+|.+|+||||   .|+..|+.
T Consensus       162 ~~-~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-------gad~n~~d~~G~TpLh---~A~~~g~~  229 (276)
T 4hbd_A          162 DI-ETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDVVKALLAC-------EADVNVQDDDGSTALM---CACEHGHK  229 (276)
T ss_dssp             HH-HHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHTCH
T ss_pred             hH-HHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-------CCCCCCCCCCCCCHHH---HHHHCCCH
Confidence            65 999999998 677888999999999999999999999999998       7789999999999999   77788999


Q ss_pred             HHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcC
Q 037168          158 EIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQME  201 (466)
Q Consensus       158 ~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g  201 (466)
                      ++++.|++..+++++.+|..|+||||+|+.+|+.+++++|++++
T Consensus       230 ~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          230 EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            99999998789999999999999999999999999999999875

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.96  E-value=2.4e-30  Score=246.25  Aligned_cols=201  Identities=17%  Similarity=0.145  Sum_probs=155.7

Q ss_pred             ccchHHHHHHHHhC--CCcccc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCc--hhhhhc----cCCCCC
Q 037168            3 KQDEQKVIELCRKV--PDHALY----VFTIHDDTVLHMATYT---KKSDLVIKLLDELPDQS--LDKMTR----QNKAGN   67 (466)
Q Consensus         3 ~g~~~~v~~ll~~~--~~~~~~----~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~--~~~~~~----~d~~G~   67 (466)
                      .|+.+.|..+++..  .+..++    ..|..|+||||+|+..   |+.+++++|++.+.+..  ...++.    .|..|.
T Consensus        23 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~  102 (273)
T 2pnn_A           23 QSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ  102 (273)
T ss_dssp             TTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTC
T ss_pred             cCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCC
Confidence            56777776666632  123333    4588999999999987   99999999999543211  011333    677999


Q ss_pred             hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC--------------CCChHHHHHHHcCCHHHHHHHHh---ccCCCCCC
Q 037168           68 TILHETATSNHALPVADKVLRKAPGLLGMRNN--------------NGETALLRAARYGKVDIFNFLAG---KISGYDHA  130 (466)
Q Consensus        68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~--------------~G~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~  130 (466)
                      ||||+|+..|+. +++++|++. +.+++.+|.              .|+||||+|+..|+.+++++|++   .       
T Consensus       103 tpL~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-------  173 (273)
T 2pnn_A          103 TALHIAIERRNM-TLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ-------  173 (273)
T ss_dssp             CHHHHHHHTTCH-HHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC-------
T ss_pred             CHHHHHHHcCCH-HHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC-------
Confidence            999999999996 999999998 778999887              79999999999999999999999   6       


Q ss_pred             CcccccccCCCCChhhHHHHHhhcCc---------HHHHHHHHHHCCCccc-------ccccCCChHHHHHHHcCChhHH
Q 037168          131 TRLPFLHRNDKTNVLHIAILSLHFGC---------IEIVKDILSVYPQAVE-------HIDDEGRNILHVAIKYRQLEIF  194 (466)
Q Consensus       131 ~~~~~~~d~~g~TpLh~A~~a~~~g~---------~~~v~~Ll~~~~~~~~-------~~d~~G~t~Lh~A~~~~~~~iv  194 (466)
                      +.+++.+|.+|+||||   .|+..|+         .++++.|++ .+++++       .+|..|+||||+|+.+|+.+++
T Consensus       174 gad~~~~d~~g~tpLh---~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv  249 (273)
T 2pnn_A          174 PADISARDSVGNTVLH---ALVEVADNTVDNTKFVTSMYNEILI-LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVL  249 (273)
T ss_dssp             CCCTTCCCTTSCCHHH---HHHHHCCSCHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             CCCceeeCCCCCcHHH---HHHHccCcchhHHHHHHHHHHHHHH-hhhhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence            6789999999999999   5556666         799999998 677776       5899999999999999999999


Q ss_pred             HHHHhcCc-ccccccccccCCCCCchh
Q 037168          195 ERVVQMEI-PLRRLVRKIDYNGNTIFH  220 (466)
Q Consensus       195 ~~Ll~~g~-~~~~~~~~~d~~G~TpLH  220 (466)
                      ++|+++|+ |    .......+.+|-|
T Consensus       250 ~~Ll~~ga~d----p~~~~~~~~~~~~  272 (273)
T 2pnn_A          250 AYILQREIHE----PECRHAAAHHHHH  272 (273)
T ss_dssp             HHHHHHHTC------------------
T ss_pred             HHHHHCCCCC----chhhhhhhhhccC
Confidence            99999998 4    5666666665543

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.96  E-value=2.7e-29  Score=221.54  Aligned_cols=161  Identities=21%  Similarity=0.253  Sum_probs=144.2

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE  102 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~  102 (466)
                      .....+.|+||.||+.|+.+++++|++     ++.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+
T Consensus         9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~   81 (169)
T 2y1l_E            9 HHGSDLGKKLLEAARAGRDDEVRILMA-----NGADVNAEDASGWTPLHLAAFNGHL-EIVEVLLKN-GADVNAVDHAGM   81 (169)
T ss_dssp             ----CHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSC
T ss_pred             cCCCcccchHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCccCCCCC
Confidence            345667899999999999999999999     4566888999999999999999996 999999988 778999999999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL  182 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L  182 (466)
                      ||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+|||
T Consensus        82 t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l  150 (169)
T 2y1l_E           82 TPLRLAALFGHLEIVEVLLKN-------GADVNANDMEGHTPLH---LAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAF  150 (169)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHH
Confidence            999999999999999999998       6678889999999999   7778899999999998 7899999999999999


Q ss_pred             HHHHHcCChhHHHHHHhcC
Q 037168          183 HVAIKYRQLEIFERVVQME  201 (466)
Q Consensus       183 h~A~~~~~~~iv~~Ll~~g  201 (466)
                      |+|+.+|+.+++++|++.|
T Consensus       151 ~~A~~~~~~~~~~~L~~~G  169 (169)
T 2y1l_E          151 DISIDNGNEDLAEILQKLN  169 (169)
T ss_dssp             HHHHHTTCHHHHHHHHTC-
T ss_pred             HHHHHhCCHHHHHHHHHcC
Confidence            9999999999999999875

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.96  E-value=6.8e-30  Score=225.77  Aligned_cols=153  Identities=19%  Similarity=0.233  Sum_probs=143.5

Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL  145 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL  145 (466)
                      +.||||.|+..|+. ++++.|++.++..++.+|..|+||||+|+..|+.+++++|++.       +.+++.+|.+|+|||
T Consensus         2 ~~~~L~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L   73 (172)
T 3v30_A            2 DSLSIHQLAAQGEL-DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-------GADPHILAKERESAL   73 (172)
T ss_dssp             --CCHHHHHHTTCH-HHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TCCTTCCCTTCCCHH
T ss_pred             chhhHHHHHHcCCH-HHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCchhhcccCCCHH
Confidence            56899999999997 9999999997777999999999999999999999999999998       678889999999999


Q ss_pred             hHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       146 h~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      |   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..
T Consensus        74 ~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~  145 (172)
T 3v30_A           74 S---LASTGGYTDIVGLLLE-RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD----LTTEADSGYTPMDLAVAL  145 (172)
T ss_dssp             H---HHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHH
T ss_pred             H---HHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHh
Confidence            9   7778999999999998 7999999999999999999999999999999999998    899999999999999999


Q ss_pred             Ccchhhhcc
Q 037168          226 RKDYVAEKM  234 (466)
Q Consensus       226 ~~~~~~~~l  234 (466)
                      ++.++++.|
T Consensus       146 ~~~~~~~~L  154 (172)
T 3v30_A          146 GYRKVQQVI  154 (172)
T ss_dssp             TCHHHHHHH
T ss_pred             CcHHHHHHH
Confidence            999998776

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=1e-29  Score=239.94  Aligned_cols=189  Identities=17%  Similarity=0.147  Sum_probs=155.0

Q ss_pred             ccchHHHHHHHH---hCCCcccccc----CCCCCcHHHHHH---HcCCHHHHHHHHHhCCCCch------hhhhccCCCC
Q 037168            3 KQDEQKVIELCR---KVPDHALYVF----TIHDDTVLHMAT---YTKKSDLVIKLLDELPDQSL------DKMTRQNKAG   66 (466)
Q Consensus         3 ~g~~~~v~~ll~---~~~~~~~~~~----~~~g~T~Lh~A~---~~g~~~~v~~Ll~~~~~~~~------~~~~~~d~~G   66 (466)
                      +|+.+.+..++.   +. +.+++..    |.+|+||||+|+   +.|+.+++++|++.+.+...      ..++..|..|
T Consensus        15 ~g~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g   93 (260)
T 3jxi_A           15 RGSPDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRG   93 (260)
T ss_dssp             HTCGGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEES
T ss_pred             hCCHHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCC
Confidence            577776555555   33 2444433    377999999999   77999999999996432110      2244556699


Q ss_pred             ChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC--------------CCCChHHHHHHHcCCHHHHHHHHhcc-CCCCCCC
Q 037168           67 NTILHETATSNHALPVADKVLRKAPGLLGMRN--------------NNGETALLRAARYGKVDIFNFLAGKI-SGYDHAT  131 (466)
Q Consensus        67 ~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d--------------~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~  131 (466)
                      +||||+|+..|+. +++++|++. +++++.+|              ..|+||||+|+..|+.+++++|++.+ .     +
T Consensus        94 ~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-----g  166 (260)
T 3jxi_A           94 QTALHIAIERRCK-HYVELLVEK-GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-----Q  166 (260)
T ss_dssp             BCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-----C
T ss_pred             CCHHHHHHHcCCH-HHHHHHHhC-CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-----C
Confidence            9999999999996 999999998 78899988              68999999999999999999999921 1     6


Q ss_pred             cccccccCCCCChhhHHHHHhhcCc---------HHHHHHHHHHCCCcc-------cccccCCChHHHHHHHcCChhHHH
Q 037168          132 RLPFLHRNDKTNVLHIAILSLHFGC---------IEIVKDILSVYPQAV-------EHIDDEGRNILHVAIKYRQLEIFE  195 (466)
Q Consensus       132 ~~~~~~d~~g~TpLh~A~~a~~~g~---------~~~v~~Ll~~~~~~~-------~~~d~~G~t~Lh~A~~~~~~~iv~  195 (466)
                      .+++.+|.+|+||||+   |+..|+         .++++.|++ .++++       +.+|..|+||||+|+.+|+.++++
T Consensus       167 a~~~~~d~~g~TpLh~---A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          167 ADLRRQDSRGNTVLHA---LVAIADNTRENTKFVTKMYDLLLI-KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             CCTTCCCTTSCCHHHH---HHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CCCcccCCCCCcHHHH---HHHhccCchhHHHHHHHHHHHHHH-hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence            7899999999999994   555455         799999998 67777       779999999999999999999999


Q ss_pred             HHHhcCcc
Q 037168          196 RVVQMEIP  203 (466)
Q Consensus       196 ~Ll~~g~~  203 (466)
                      +|+++|++
T Consensus       243 ~Ll~~g~~  250 (260)
T 3jxi_A          243 HIIRREIA  250 (260)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhCCC
Confidence            99999876

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.96  E-value=3.7e-29  Score=222.74  Aligned_cols=169  Identities=17%  Similarity=0.138  Sum_probs=150.3

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168           26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL  105 (466)
Q Consensus        26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL  105 (466)
                      .++.++||.||+.|+.++++.|++..    +.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+|||
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L   76 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNT----ENDLNQGDDHGFSPLHWACREGRS-AVVEMLIMR-GARINVMNRGDDTPL   76 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCT----TSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcC----cccccccCCCCCCHHHHHHHcCcH-HHHHHHHHc-CCCCCCcCCCCCCHH
Confidence            46789999999999999999999963    446888999999999999999996 999999988 788999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA  185 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A  185 (466)
                      |+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+++++.+|..|+||||+|
T Consensus        77 ~~A~~~~~~~~v~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A  145 (179)
T 3f6q_A           77 HLAASHGHRDIVQKLLQY-------KADINAVNEHGNVPLH---YACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKA  145 (179)
T ss_dssp             HHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGS
T ss_pred             HHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHH
Confidence            999999999999999998       6788899999999999   7778899999999998 8999999999999999999


Q ss_pred             HHcCChhHHHHHHhcCcccccccccccCCC
Q 037168          186 IKYRQLEIFERVVQMEIPLRRLVRKIDYNG  215 (466)
Q Consensus       186 ~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G  215 (466)
                      +..++.+++++|+++|++    ++..+.++
T Consensus       146 ~~~~~~~~~~~L~~~g~~----~~~~~~~~  171 (179)
T 3f6q_A          146 KAPLRELLRERAEKMGQN----LNRIPYKD  171 (179)
T ss_dssp             CHHHHHHHHHHHHHTTCC----CSCBCCCC
T ss_pred             HHHHHHHHHHHHHHhhcC----cccCCccc
Confidence            999999999999999988    66555444

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.96  E-value=2.9e-29  Score=220.61  Aligned_cols=153  Identities=18%  Similarity=0.209  Sum_probs=144.4

Q ss_pred             CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168           65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV  144 (466)
Q Consensus        65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp  144 (466)
                      .|.||||.|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.+|..|.||
T Consensus         2 ~~~t~L~~A~~~g~~-~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~   72 (167)
T 3v31_A            2 ANSLSVHQLAAQGEM-LYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQN-------GADPQLLGKGRESA   72 (167)
T ss_dssp             TTCCCHHHHHHTTCH-HHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCH
T ss_pred             CCcchHHHHHHCCCH-HHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-------CCCCCCcCCCCCcH
Confidence            589999999999997 999999999 677999999999999999999999999999998       66788899999999


Q ss_pred             hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      ||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+.
T Consensus        73 L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~  144 (167)
T 3v31_A           73 LS---LACSKGYTDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD----PTIETDSGYNSMDLAVA  144 (167)
T ss_dssp             HH---HHHHHTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHH
T ss_pred             HH---HHHHcCCHHHHHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHH
Confidence            99   7778899999999999 7899999999999999999999999999999999998    89999999999999999


Q ss_pred             cCcchhhhcc
Q 037168          225 KRKDYVAEKM  234 (466)
Q Consensus       225 ~~~~~~~~~l  234 (466)
                      .++.++++.|
T Consensus       145 ~~~~~~~~~L  154 (167)
T 3v31_A          145 LGYRSVQQVI  154 (167)
T ss_dssp             HTCHHHHHHH
T ss_pred             cCcHHHHHHH
Confidence            9999998776

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=5.1e-29  Score=218.60  Aligned_cols=155  Identities=18%  Similarity=0.143  Sum_probs=94.8

Q ss_pred             CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168           63 NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT  142 (466)
Q Consensus        63 d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~  142 (466)
                      |.+|.||||.|++.|+. ++++.|++..+.+++..|..|+||||+|+..|+.+++++|++.       +.+++.+|.+|+
T Consensus         5 ~~~~~~~l~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~   76 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDV-ETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-------GADVHAKDKGGL   76 (165)
T ss_dssp             -CHHHHHHHHHHHHTCH-HHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSC
T ss_pred             cchhhHHHHHHHHhCCH-HHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-------CCCCCccCCCCC
Confidence            45566666666666664 6666666655555555666666666666666666666666665       445555666666


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA  222 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA  222 (466)
                      ||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|
T Consensus        77 t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~a  148 (165)
T 3twr_A           77 VPLH---NACSYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLV  148 (165)
T ss_dssp             CHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTGGGS
T ss_pred             CHHH---HHHHcCcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCChhHhH
Confidence            6666   4445566666666665 5666666666666666666666666666666666665    566666666666665


Q ss_pred             hccCcchhhhcc
Q 037168          223 GIKRKDYVAEKM  234 (466)
Q Consensus       223 a~~~~~~~~~~l  234 (466)
                      .+ ++.+++++|
T Consensus       149 ~~-~~~~i~~~L  159 (165)
T 3twr_A          149 KD-GDTDIQDLL  159 (165)
T ss_dssp             CT-TCHHHHHHH
T ss_pred             hc-CChHHHHHH
Confidence            55 455555444

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=3.6e-29  Score=219.54  Aligned_cols=161  Identities=19%  Similarity=0.130  Sum_probs=145.9

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCCh
Q 037168           24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGET  103 (466)
Q Consensus        24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~t  103 (466)
                      .|.+|+||||.|++.|+.++++.|++..    +.+++..|..|.||||+|+..|+. +++++|++. +.+++.+|.+|+|
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t   77 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQ----SVNCRDIEGRQSTPLHFAAGYNRV-SVVEYLLQH-GADVHAKDKGGLV   77 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTT----TTTCCCTTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCC
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcC----CCCccccccCCCCHHHHHHHcChH-HHHHHHHhc-CCCCCccCCCCCC
Confidence            4677899999999999999999999863    345777889999999999999996 999999998 7789999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHH
Q 037168          104 ALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILH  183 (466)
Q Consensus       104 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh  183 (466)
                      |||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+||||
T Consensus        78 ~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~  146 (165)
T 3twr_A           78 PLHNACSYGHYEVAELLVKH-------GAVVNVADLWKFTPLH---EAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLD  146 (165)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGG
T ss_pred             HHHHHHHcCcHHHHHHHHhC-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhH
Confidence            99999999999999999998       6788899999999999   7778999999999998 79999999999999999


Q ss_pred             HHHHcCChhHHHHHHhcCc
Q 037168          184 VAIKYRQLEIFERVVQMEI  202 (466)
Q Consensus       184 ~A~~~~~~~iv~~Ll~~g~  202 (466)
                      +|+. ++.+++++|+++|+
T Consensus       147 ~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          147 LVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             GSCT-TCHHHHHHHHTC--
T ss_pred             hHhc-CChHHHHHHhhccc
Confidence            9877 89999999999875

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.96  E-value=2.3e-29  Score=235.06  Aligned_cols=184  Identities=13%  Similarity=0.060  Sum_probs=133.8

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      +..|.||||.|++.|+.+.++.|+++     +.+++. +..|.||||.|+..|+. ++++.|++. +.+++.+|..|+||
T Consensus         2 ~~~g~t~L~~a~~~~~~~~~~~ll~~-----g~~~~~-~~~~~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~d~~g~t~   73 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLRKTGSERIAH-----GMRVKF-NPLPLALLLDSSLEGEF-DLVQRIIYE-VDDPSLPNDEGITA   73 (239)
T ss_dssp             -----------------------------------------CHHHHHHHHHHTCH-HHHHHHTST-TSSCCCCCTTSCCH
T ss_pred             CccccccCchhhhhhhHHHHHHHhcc-----CCCccc-CchhhHHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCH
Confidence            45799999999999999999999994     455554 47899999999999997 999999988 66899999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC-hHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR-NILH  183 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~-t~Lh  183 (466)
                      ||+|+..|+.+++++|+++       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+++++.+|..|. ||||
T Consensus        74 L~~A~~~g~~~~v~~Ll~~-------ga~~~~~d~~g~tpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~  142 (239)
T 1ycs_B           74 LHNAVCAGHTEIVKFLVQF-------GVNVNAADSDGWTPLH---CAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAAD  142 (239)
T ss_dssp             HHHHHHHTCHHHHHHHHHH-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHH
T ss_pred             HHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHH
Confidence            9999999999999999998       6788999999999999   7778999999999999 8999999998887 9999


Q ss_pred             HH--HHcCChhHHHHHHhcCcccccc-----cccccCCCCCchhhhhccCc
Q 037168          184 VA--IKYRQLEIFERVVQMEIPLRRL-----VRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       184 ~A--~~~~~~~iv~~Ll~~g~~~~~~-----~~~~d~~G~TpLHlAa~~~~  227 (466)
                      +|  +.+|+.+++++|+++|++....     ....|..|.||+|++.+.|.
T Consensus       143 ~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          143 KCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             HCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             HHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence            99  8889999999999998873211     22237889999999998775

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=2e-28  Score=212.19  Aligned_cols=151  Identities=20%  Similarity=0.161  Sum_probs=125.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR  107 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~  107 (466)
                      ..||||.|++.|+.++++.|++.+++     ++ .|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||||+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~   73 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAP-----FT-TDWLGTSPLHLAAQYGHF-STTEVLLRA-GVSRDARTKVDRTPLHM   73 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCC-----CC-CCTTCCCHHHHHHHHTCH-HHHHHHHTT-TCCTTCCCTTCCCHHHH
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCC-----CC-cCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCHHHH
Confidence            45788999999999999999886543     23 577888999999888886 888888877 66788888888899999


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      |+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.
T Consensus        74 A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~  142 (153)
T 1awc_B           74 AASEGHANIVEVLLKH-------GADVNAKDMLKMTALH---WATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISID  142 (153)
T ss_dssp             HHHHTCHHHHHHHHTT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHcChHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHH
Confidence            8888888888888887       5677788888888888   6667888888888888 688888888888888888888


Q ss_pred             cCChhHHHHH
Q 037168          188 YRQLEIFERV  197 (466)
Q Consensus       188 ~~~~~iv~~L  197 (466)
                      +|+.+++++|
T Consensus       143 ~~~~~i~~~L  152 (153)
T 1awc_B          143 NGNEDLAEIL  152 (153)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCCHHHHHHh
Confidence            8888888876

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.96  E-value=2e-28  Score=212.61  Aligned_cols=154  Identities=18%  Similarity=0.187  Sum_probs=139.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR  107 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~  107 (466)
                      +.||||.|++.|+.++++.|++..    +.+++..|..|.||||+ +..|+. ++++.|++. +.+++.+|..|+||||+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~-~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~   74 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRE----LVHPDALNRFGKTALQV-MMFGST-AIALELLKQ-GASPNVQDTSGTSPVHD   74 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTT----CCCTTCCCTTSCCHHHH-SCTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhh----CcCccccCCCCCcHHHH-HHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHH
Confidence            579999999999999999999951    23678889999999999 888986 999999988 77899999999999999


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      |+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ . .+++.+|..|+||||+|+.
T Consensus        75 A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~  142 (156)
T 1bd8_A           75 AARTGFLDTLKVLVEH-------GADVNVPDGTGALPIH---LAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQ  142 (156)
T ss_dssp             HHHTTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHH
T ss_pred             HHHcCcHHHHHHHHHc-------CCCCCCcCCCCCcHHH---HHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHH
Confidence            9999999999999998       6788889999999999   6778899999999998 4 8899999999999999999


Q ss_pred             cCChhHHHHHHhc
Q 037168          188 YRQLEIFERVVQM  200 (466)
Q Consensus       188 ~~~~~iv~~Ll~~  200 (466)
                      +|+.+++++|+++
T Consensus       143 ~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          143 RGAQDLVDILQGH  155 (156)
T ss_dssp             SCCHHHHHHHHTT
T ss_pred             cCcHHHHHHHHhh
Confidence            9999999999874

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.95  E-value=2.3e-28  Score=217.55  Aligned_cols=155  Identities=18%  Similarity=0.208  Sum_probs=143.5

Q ss_pred             CCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCC
Q 037168           64 KAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTN  143 (466)
Q Consensus        64 ~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~T  143 (466)
                      .++.+|||.|+..|+. ++++.|++..+.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.+|.+|+|
T Consensus         3 ~~~~~~l~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t   74 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNA-VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-------GARINVMNRGDDT   74 (179)
T ss_dssp             ----CCHHHHHHHTCH-HHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCC
T ss_pred             HHHHHHHHHHHHcCCH-HHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-------CCCCCCcCCCCCC
Confidence            5688999999999997 9999999998889999999999999999999999999999998       6788899999999


Q ss_pred             hhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhh
Q 037168          144 VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAG  223 (466)
Q Consensus       144 pLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa  223 (466)
                      |||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++    ++.+|.+|+||||+|+
T Consensus        75 ~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~  146 (179)
T 3f6q_A           75 PLH---LAASHGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL----VSICNKYGEMPVDKAK  146 (179)
T ss_dssp             HHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SSBCCTTSCCGGGGSC
T ss_pred             HHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----cchhccCCCCcHHHHH
Confidence            999   7778999999999999 7999999999999999999999999999999999998    8999999999999999


Q ss_pred             ccCcchhhhcc
Q 037168          224 IKRKDYVAEKM  234 (466)
Q Consensus       224 ~~~~~~~~~~l  234 (466)
                      ..++.++++.|
T Consensus       147 ~~~~~~~~~~L  157 (179)
T 3f6q_A          147 APLRELLRERA  157 (179)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            98888887666

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.95  E-value=2.8e-28  Score=214.98  Aligned_cols=157  Identities=24%  Similarity=0.241  Sum_probs=144.7

Q ss_pred             ccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCC
Q 037168           61 RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND  140 (466)
Q Consensus        61 ~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~  140 (466)
                      .....+.||||.|++.|+. +++++|++. +.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.+|.+
T Consensus         9 ~~~~~~~~~l~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~   79 (169)
T 2y1l_E            9 HHGSDLGKKLLEAARAGRD-DEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKN-------GADVNAVDHA   79 (169)
T ss_dssp             ----CHHHHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTT
T ss_pred             cCCCcccchHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCC
Confidence            4567788999999999997 999999998 778999999999999999999999999999998       6678889999


Q ss_pred             CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchh
Q 037168          141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFH  220 (466)
Q Consensus       141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLH  220 (466)
                      |+||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||||
T Consensus        80 g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~  151 (169)
T 2y1l_E           80 GMTPLR---LAALFGHLEIVEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD----VNAQDKFGKTAFD  151 (169)
T ss_dssp             SCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHH
T ss_pred             CCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHH
Confidence            999999   7778999999999998 8999999999999999999999999999999999998    8999999999999


Q ss_pred             hhhccCcchhhhcc
Q 037168          221 MAGIKRKDYVAEKM  234 (466)
Q Consensus       221 lAa~~~~~~~~~~l  234 (466)
                      +|++.++.++++.|
T Consensus       152 ~A~~~~~~~~~~~L  165 (169)
T 2y1l_E          152 ISIDNGNEDLAEIL  165 (169)
T ss_dssp             HHHHTTCHHHHHHH
T ss_pred             HHHHhCCHHHHHHH
Confidence            99999999888665

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.95  E-value=2.5e-28  Score=211.57  Aligned_cols=151  Identities=19%  Similarity=0.144  Sum_probs=139.4

Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL  145 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL  145 (466)
                      +.||||.|++.|+. ++++.|++.+ .+++ .|..|.||||+|+..|+.+++++|++.       +.+++.+|.+|+|||
T Consensus         2 ~~~~L~~A~~~g~~-~~v~~Ll~~g-~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L   71 (153)
T 1awc_B            2 LGKKLLEAARAGQD-DEVRILMANG-APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRA-------GVSRDARTKVDRTPL   71 (153)
T ss_dssp             HHHHHHHHHHHTCH-HHHHHHHHHT-CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TCCTTCCCTTCCCHH
T ss_pred             ccHHHHHHHHcCCH-HHHHHHHHcC-CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCHH
Confidence            46899999999997 9999999994 4454 689999999999999999999999998       667888999999999


Q ss_pred             hHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       146 h~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      |   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..
T Consensus        72 ~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~  143 (153)
T 1awc_B           72 H---MAASEGHANIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----VHTQSKFCKTAFDISIDN  143 (153)
T ss_dssp             H---HHHHHTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHT
T ss_pred             H---HHHHcChHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHc
Confidence            9   6678899999999998 7999999999999999999999999999999999998    899999999999999999


Q ss_pred             Ccchhhhcc
Q 037168          226 RKDYVAEKM  234 (466)
Q Consensus       226 ~~~~~~~~l  234 (466)
                      ++.++++.|
T Consensus       144 ~~~~i~~~L  152 (153)
T 1awc_B          144 GNEDLAEIL  152 (153)
T ss_dssp             TCHHHHHHH
T ss_pred             CCHHHHHHh
Confidence            999888654

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.95  E-value=3.9e-28  Score=210.77  Aligned_cols=151  Identities=17%  Similarity=0.168  Sum_probs=141.6

Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL  145 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL  145 (466)
                      |.||||.|+..|+. ++++.|++..+.+++.+|..|+||||+ +..|+.+++++|++.       +.+++.+|.+|+|||
T Consensus         2 ~~~~L~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L   72 (156)
T 1bd8_A            2 AGDRLSGAAARGDV-QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-------GASPNVQDTSGTSPV   72 (156)
T ss_dssp             HHHHHHHHHHHTCH-HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-------TCCTTCCCTTSCCHH
T ss_pred             cchHHHHHHHhCCH-HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-------CCCCCCcCCCCCCHH
Confidence            57999999999997 999999999667899999999999999 999999999999998       678889999999999


Q ss_pred             hHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       146 h~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      |   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|++. ++    ++.+|.+|+||||+|+..
T Consensus        73 ~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~----~~~~~~~g~t~l~~A~~~  143 (156)
T 1bd8_A           73 H---DAARTGFLDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD----LHRRDARGLTPLELALQR  143 (156)
T ss_dssp             H---HHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC----TTCCCTTSCCHHHHHHHS
T ss_pred             H---HHHHcCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC----CCCcCCCCCCHHHHHHHc
Confidence            9   7778999999999998 8899999999999999999999999999999998 77    899999999999999999


Q ss_pred             Ccchhhhcc
Q 037168          226 RKDYVAEKM  234 (466)
Q Consensus       226 ~~~~~~~~l  234 (466)
                      ++.++++.|
T Consensus       144 ~~~~~v~~L  152 (156)
T 1bd8_A          144 GAQDLVDIL  152 (156)
T ss_dssp             CCHHHHHHH
T ss_pred             CcHHHHHHH
Confidence            999988665

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.95  E-value=3.9e-29  Score=231.94  Aligned_cols=193  Identities=12%  Similarity=0.033  Sum_probs=157.9

Q ss_pred             HHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168           44 VIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK  123 (466)
Q Consensus        44 v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~  123 (466)
                      ++.|++.+.+.  ...+..+..|.||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.
T Consensus         1 v~~ll~~~~~~--~~~~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~   76 (229)
T 2vge_A            1 MRSVLRKAGSP--RKARRARLNPLVLLLDAALTGEL-EVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITA   76 (229)
T ss_dssp             ---------CC--CCCCCTTSCHHHHHHHHHHHTCH-HHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CeehhccCCCC--ccccccccchhHHHHHHHHcCCH-HHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            45677755442  22345677888999999999997 999999998 678999999999999999999999999999998


Q ss_pred             cCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc-cCCChHHHHH--HHcCChhHHHHHHhc
Q 037168          124 ISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID-DEGRNILHVA--IKYRQLEIFERVVQM  200 (466)
Q Consensus       124 ~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A--~~~~~~~iv~~Ll~~  200 (466)
                             +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+| ..|+||||+|  +..|+.+++++|+++
T Consensus        77 -------ga~~n~~d~~g~tpLh---~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~  145 (229)
T 2vge_A           77 -------GANVNSPDSHGWTPLH---CAASCNDTVICMALVQ-HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV  145 (229)
T ss_dssp             -------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHT-TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred             -------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence                   6788999999999999   7778999999999998 899999987 6999999999  999999999999999


Q ss_pred             CcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccc--ccccccCCCCChHHHHHHH
Q 037168          201 EIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPH--FLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       201 g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~--~~~~~n~~g~Tp~~l~~~~  277 (466)
                      |++    ++.+|..|.||+|.++.....++   +                   ...+.  .++.+|.+|.||+++|...
T Consensus       146 ga~----~~~~~~~~~~~l~~~~~~~~~~~---l-------------------l~~ga~~~~~~~d~~G~TpL~~A~~~  198 (229)
T 2vge_A          146 EQS----MGLMNSGAVYALWDYSAEFGDEL---S-------------------FREGESVTVLRRDGPEETDWWWAALH  198 (229)
T ss_dssp             HHH----TTTSGGGEEEESSCBCCSSTTBC---C-------------------BCTTCEEEEEESSCTTCSSEEEEEET
T ss_pred             CCC----cccccCCchHHHHHHhhcccccc---C-------------------ccccccccccccCCCcccHHHHHHHc
Confidence            998    89999999999997776543322   2                   11222  3678899999999987653

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=5.5e-28  Score=211.08  Aligned_cols=153  Identities=22%  Similarity=0.241  Sum_probs=141.5

Q ss_pred             CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168           65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV  144 (466)
Q Consensus        65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp  144 (466)
                      ...||||.|+..|+. ++++.|++. +.+++.+|..|+||||+|+. |+.+++++|++.       +.+++.+|..|+||
T Consensus         4 ~~~~~L~~A~~~g~~-~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~~~~~~~~~g~t~   73 (162)
T 1ihb_A            4 PWGNELASAAARGDL-EQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR-------GANPDLKDRTGFAV   73 (162)
T ss_dssp             -CHHHHHHHHHHTCH-HHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHT-------TCCTTCCCTTSCCH
T ss_pred             hHhhHHHHHHHcCCH-HHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHc-------CCCCCCCCCCCCCH
Confidence            467999999999997 999999987 67899999999999999999 999999999998       67888899999999


Q ss_pred             hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      ||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++   .++.+|..|+||||+|++
T Consensus        74 L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~t~l~~A~~  146 (162)
T 1ihb_A           74 IH---DAARAGFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACDLARL  146 (162)
T ss_dssp             HH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHHHHHH
T ss_pred             HH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC---CCCCcCCCCCcHHHHHHH
Confidence            99   6778899999999998 8899999999999999999999999999999999986   258999999999999999


Q ss_pred             cCcchhhhcc
Q 037168          225 KRKDYVAEKM  234 (466)
Q Consensus       225 ~~~~~~~~~l  234 (466)
                      .++.++++.|
T Consensus       147 ~~~~~~~~~L  156 (162)
T 1ihb_A          147 YGRNEVVSLM  156 (162)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCCHHHHHHH
Confidence            9999988766

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.94  E-value=5.3e-27  Score=218.93  Aligned_cols=156  Identities=18%  Similarity=0.195  Sum_probs=112.4

Q ss_pred             CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168           63 NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT  142 (466)
Q Consensus        63 d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~  142 (466)
                      +..|.||||.|++.|+. +.++.|+++ +.+++. +..|.||||.|+..|+.+++++|++.       +.+++.+|.+|+
T Consensus         2 ~~~g~t~L~~a~~~~~~-~~~~~ll~~-g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~~~~~~d~~g~   71 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLR-KTGSERIAH-GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYE-------VDDPSLPNDEGI   71 (239)
T ss_dssp             --------------------------------------CHHHHHHHHHHTCHHHHHHHTST-------TSSCCCCCTTSC
T ss_pred             CccccccCchhhhhhhH-HHHHHHhcc-CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCC
Confidence            45699999999999996 999999988 666775 47899999999999999999999988       668889999999


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC-Cchhh
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN-TIFHM  221 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~-TpLHl  221 (466)
                      ||||   .|+..|+.++++.|++ ++++++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|. ||||+
T Consensus        72 t~L~---~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~~~t~l~~  143 (239)
T 1ycs_B           72 TALH---NAVCAGHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA----VFAMTYSDMQTAADK  143 (239)
T ss_dssp             CHHH---HHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCSSSCCCHHHH
T ss_pred             CHHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cceecCCCCcchHHH
Confidence            9999   7778899999999999 6899999999999999999999999999999999998    899998877 99999


Q ss_pred             h--hccCcchhhhccCC
Q 037168          222 A--GIKRKDYVAEKMEG  236 (466)
Q Consensus       222 A--a~~~~~~~~~~l~~  236 (466)
                      |  +..++.++++.|..
T Consensus       144 a~~~~~g~~~~~~~Ll~  160 (239)
T 1ycs_B          144 CEEMEEGYTQCSQFLYG  160 (239)
T ss_dssp             CCSSSTTCCCHHHHHHH
T ss_pred             HHHhhhccHHHHHHHHH
Confidence            9  77888998877743

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.94  E-value=5.6e-27  Score=210.12  Aligned_cols=158  Identities=12%  Similarity=0.073  Sum_probs=137.9

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccC-CCCChHHHHHHHcCCcH---HHHHHHHHhCCCcccCcCCCCCh
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTILHETATSNHAL---PVADKVLRKAPGLLGMRNNNGET  103 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~---~~v~~Ll~~~~~~~~~~d~~G~t  103 (466)
                      +.++||.|++.|+.+.++.+++.+.       +..+ ..|+||||+|+..|+..   +++++|+++ |++++.+|.+|+|
T Consensus         6 ~~~~l~~Aa~~g~~~~~~~l~~~~~-------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~T   77 (186)
T 3t8k_A            6 EYRTVSAAAMLGTYEDFLELFEKGY-------EDKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTT   77 (186)
T ss_dssp             HCSSHHHHHHHSCHHHHHHHHHHSS-------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCC
T ss_pred             cccHHHHHHHcCCHHHHHHHHhcCc-------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCc
Confidence            5689999999999999999998543       3344 67999999999998742   489999987 8899999999999


Q ss_pred             HHHHHHHcCC------HHHHHHHHhccCCCCCCCcccccccCCCC-ChhhHHHHHhhc-----CcHHHHHHHHHHCCCcc
Q 037168          104 ALLRAARYGK------VDIFNFLAGKISGYDHATRLPFLHRNDKT-NVLHIAILSLHF-----GCIEIVKDILSVYPQAV  171 (466)
Q Consensus       104 pLh~Aa~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~-TpLh~A~~a~~~-----g~~~~v~~Ll~~~~~~~  171 (466)
                      |||+|+..|+      .+++++|+++       |++++.+|.+|+ ||||   .|+..     ++.++++.|++..|+++
T Consensus        78 pLh~a~~~~~~~~~~~~~iv~~Ll~~-------Gadin~~d~~g~ttpLh---~A~~~~~~~~~~~~iv~~Ll~~~gad~  147 (186)
T 3t8k_A           78 LFFPLFQGGGNDITGTTELCKIFLEK-------GADITALYKPYKIVVFK---NIFNYFVDENEMIPLYKLIFSQSGLQL  147 (186)
T ss_dssp             THHHHHHHCTTCHHHHHHHHHHHHHT-------TCCSSSCBGGGTBCTTG---GGGGCCSCHHHHHHHHHHHHTSTTCCT
T ss_pred             HHHHHHHcCCcchhhHHHHHHHHHHC-------CCCCCccCCCcCchHHH---HHHHcCCChhhHHHHHHHHHHhcCCCC
Confidence            9999999987      5889999998       789999999999 9999   44453     45679999997679999


Q ss_pred             cccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          172 EHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       172 ~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      +.+|..|+||||+|++.|+.+++++|.+....
T Consensus       148 ~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~  179 (186)
T 3t8k_A          148 LIKDKWGLTALEFVKRCQKPIALKMMEDYIKK  179 (186)
T ss_dssp             TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999987544

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.93  E-value=2.4e-26  Score=199.81  Aligned_cols=145  Identities=10%  Similarity=0.026  Sum_probs=100.1

Q ss_pred             hccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC
Q 037168           60 TRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN  139 (466)
Q Consensus        60 ~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~  139 (466)
                      +..+..|.||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|+ .|+.+++++|++.       +.+++.+|.
T Consensus         6 ~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-------g~~~~~~d~   75 (156)
T 1bi7_B            6 GSSMEPSADWLATAAARGRV-EEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLH-------GAEPNCADP   75 (156)
T ss_dssp             ----CCSTTHHHHHHHHTCH-HHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTT-------TCCCCCCCT
T ss_pred             cCCCccchHHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHc-------CCCCCCcCC
Confidence            34567788888888888885 888888876 6677888888888888874 7888888888877       567777788


Q ss_pred             CCCC-hhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168          140 DKTN-VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI  218 (466)
Q Consensus       140 ~g~T-pLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp  218 (466)
                      .|+| |||   .|+..|+.++++.|++ ++++++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|..|+||
T Consensus        76 ~g~ttpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~  147 (156)
T 1bi7_B           76 ATLTRPVH---DAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG----TRGSNHARIDA  147 (156)
T ss_dssp             TTCCCHHH---HHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred             CCCcHHHH---HHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC----CCccCcCcCcc
Confidence            8887 888   5667788888888887 5778888888888888888888888888888888887    88888888888


Q ss_pred             hhhh
Q 037168          219 FHMA  222 (466)
Q Consensus       219 LHlA  222 (466)
                      .+-+
T Consensus       148 ~~~~  151 (156)
T 1bi7_B          148 AEGP  151 (156)
T ss_dssp             ----
T ss_pred             cccC
Confidence            7743

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.93  E-value=4.4e-26  Score=193.38  Aligned_cols=132  Identities=12%  Similarity=0.055  Sum_probs=88.8

Q ss_pred             hhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccc
Q 037168           58 KMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLH  137 (466)
Q Consensus        58 ~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~  137 (466)
                      +++.+|..|.||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|+. |+.+++++|++.       +.+++.+
T Consensus         4 ~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~~~~~~   73 (136)
T 1d9s_A            4 GIHMLGGSSDAGLATAAARGQV-ETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLH-------GAEPNCA   73 (136)
T ss_dssp             CCSCCCCCCSCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH-------TCCSSCC
T ss_pred             CccCCCCCCccHHHHHHHcCCH-HHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC-------CCCCCCc
Confidence            4556666666666666666664 666666666 45566666666666666666 666666666666       4556666


Q ss_pred             cCC-CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          138 RND-KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       138 d~~-g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      |.. |+||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+++.+++++|+++|+|
T Consensus        74 ~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           74 DPATLTRPVH---DAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             BTTTTBCHHH---HHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            666 677777   4556667777777776 6666777777777777777777777777777776653

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.92  E-value=1.2e-25  Score=195.42  Aligned_cols=146  Identities=14%  Similarity=0.025  Sum_probs=115.7

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN  100 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~  100 (466)
                      ....+..|.||||+|++.|+.+++++|++     .+.+++.+|..|+||||+|+ .|+. +++++|++. +.+++.+|..
T Consensus         5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~-~~~~-~~v~~Ll~~-g~~~~~~d~~   76 (156)
T 1bi7_B            5 AGSSMEPSADWLATAAARGRVEEVRALLE-----AGANPNAPNSYGRRPIQVMM-MGSA-RVAELLLLH-GAEPNCADPA   76 (156)
T ss_dssp             -----CCSTTHHHHHHHHTCHHHHHHHHT-----TTCCTTCCCSSSCCTTTSSC-TTCH-HHHHHHHTT-TCCCCCCCTT
T ss_pred             ccCCCccchHHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHH-cCCH-HHHHHHHHc-CCCCCCcCCC
Confidence            34568889999999999999999999999     55678899999999999985 7886 999999998 7889999999


Q ss_pred             CCh-HHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168          101 GET-ALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR  179 (466)
Q Consensus       101 G~t-pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~  179 (466)
                      |+| |||+|+..|+.+++++|+++       +++++.+|.+|+||||   .|+..|+.+++++|++ ++++++.+|..|.
T Consensus        77 g~ttpL~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~  145 (156)
T 1bi7_B           77 TLTRPVHDAAREGFLDTLVVLHRA-------GARLDVRDAWGRLPVD---LAEELGHRDVARYLRA-AAGGTRGSNHARI  145 (156)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHH-------TCCSSCCCTTCCCHHH---HHHHHTCHHHHHHHSS-CC-----------
T ss_pred             CCcHHHHHHHHCCCHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHhCHHHHHHHHHH-cCCCCCccCcCcC
Confidence            999 99999999999999999999       6788999999999999   6778899999999998 8999999999999


Q ss_pred             hHHHHH
Q 037168          180 NILHVA  185 (466)
Q Consensus       180 t~Lh~A  185 (466)
                      |+.+-+
T Consensus       146 t~~~~~  151 (156)
T 1bi7_B          146 DAAEGP  151 (156)
T ss_dssp             ------
T ss_pred             cccccC
Confidence            998744

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=3.2e-25  Score=188.01  Aligned_cols=130  Identities=16%  Similarity=0.081  Sum_probs=120.9

Q ss_pred             CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCc
Q 037168           18 DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMR   97 (466)
Q Consensus        18 ~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~   97 (466)
                      +.+++..|..|.||||+|++.|+.+++++|++     .+.+++.+|..|+||||+|+. |+. +++++|++. +.+++.+
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~-~~~-~~v~~Ll~~-g~~~~~~   73 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLE-----AGADPNALNRFGRRPIQVMMM-GSA-QVAELLLLH-GAEPNCA   73 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCTTTTTSTT-SCH-HHHHHHHHH-TCCSSCC
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHH-----cCCCcCCcCCCCCCHHHHHHc-CCH-HHHHHHHHC-CCCCCCc
Confidence            46788899999999999999999999999999     456788999999999999999 996 999999998 7789999


Q ss_pred             CCC-CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168           98 NNN-GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus        98 d~~-G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      |.. |+||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++
T Consensus        74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~---~A~~~~~~~~~~~Ll~  132 (136)
T 1d9s_A           74 DPATLTRPVHDAAREGFLDTLVVLHRA-------GARLDVCDAWGRLPVD---LAEEQGHRDIARYLHA  132 (136)
T ss_dssp             BTTTTBCHHHHHHHHTCHHHHHHHHHT-------CCCCCCCSSSSSCHHH---HHHHHTCHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH
Confidence            999 99999999999999999999998       6788899999999999   6778899999999998

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.92  E-value=7.6e-27  Score=231.70  Aligned_cols=179  Identities=13%  Similarity=0.091  Sum_probs=145.7

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCc--ccCcCCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGL--LGMRNNN  100 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~--~~~~d~~  100 (466)
                      ..+.+++||||+||+.|+.++|++|++.+...  ...+..|..|.||||+|+..|+. +++++|+++++..  .+..+.+
T Consensus        87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~--~~~~~~~~~~~tpL~~Aa~~G~~-eiv~~Ll~~gad~~~~~i~~~~  163 (376)
T 2aja_A           87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSD--EIVKVIQAENYQAFRLAAENGHL-HVLNRLCELAPTEIMAMIQAEN  163 (376)
T ss_dssp             HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CC--SSCC--CHHHHHHHHHHHHTTCH-HHHHHHHHSCTTTHHHHHSHHH
T ss_pred             HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcH--HHHHHhccCCCCHHHHHHHcCCH-HHHHHHHhCCCCccccccCCCC
Confidence            34667789999999999999999999965421  11223466788999999999996 9999999985320  2222333


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccc--ccCCCCChhhHHHHHh-hcCcHHHHHHHHHHCCCcccccccC
Q 037168          101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFL--HRNDKTNVLHIAILSL-HFGCIEIVKDILSVYPQAVEHIDDE  177 (466)
Q Consensus       101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~--~d~~g~TpLh~A~~a~-~~g~~~~v~~Ll~~~~~~~~~~d~~  177 (466)
                       +||||+|+..|+.+++++|+++       +.+++.  .|.+|.||||   .|+ ..|+.+++++|++ .|.       .
T Consensus       164 -~TpLh~Aa~~G~~eiv~~Ll~~-------ga~~~~~~~d~~g~TpL~---~Aa~~~G~~eiv~~Ll~-~ga-------~  224 (376)
T 2aja_A          164 -YHAFRLAAENGHLHVLNRLCEL-------APTEATAMIQAENYYAFR---WAAVGRGHHNVINFLLD-CPV-------M  224 (376)
T ss_dssp             -HHHHHHHHHTTCHHHHHHHHHS-------CGGGHHHHHHHHHHHHHH---HHHSTTCCHHHHHHHTT-SHH-------H
T ss_pred             -CCHHHHHHHCCCHHHHHHHHHc-------CCccchhccCCCCCCHHH---HHHHHCCCHHHHHHHHh-CCC-------c
Confidence             9999999999999999999998       566666  8889999999   888 9999999999998 553       3


Q ss_pred             CChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168          178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA  231 (466)
Q Consensus       178 G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~  231 (466)
                      |+||||+|+.+|+.+++++|+++|++    ++.+|    ++++.|+..|+.+++
T Consensus       225 ~~taL~~Aa~~g~~evv~lL~~~ga~----~~~~~----~~l~~A~~~g~~~vv  270 (376)
T 2aja_A          225 LAYAEIHEFEYGEKYVNPFIARHVNR----LKEMH----DAFKLSNPDGVFDLV  270 (376)
T ss_dssp             HHHHHHCTTTTTTTTHHHHHHHHHHH----HHHHH----TTTTTTSSSSCCCCS
T ss_pred             cchHHHHHHHCCCHHHHHHHHhcCcc----ccccc----HHHHHHHHCCChhhh
Confidence            89999999999999999999999987    66555    489999999988865

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.92  E-value=1e-25  Score=201.92  Aligned_cols=150  Identities=13%  Similarity=0.069  Sum_probs=131.6

Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCChHHHHHHHcCCH----HHHHHHHhccCCCCCCCcccccccCC
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGETALLRAARYGKV----DIFNFLAGKISGYDHATRLPFLHRND  140 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~~~~d~~  140 (466)
                      +.++||.|++.|+. +.++.++..+   ++.++ ..|+||||+|+..|+.    +++++|++.       |++++.+|.+
T Consensus         6 ~~~~l~~Aa~~g~~-~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------Gadvn~~d~~   74 (186)
T 3t8k_A            6 EYRTVSAAAMLGTY-EDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINK-------GADIKSRTKE   74 (186)
T ss_dssp             HCSSHHHHHHHSCH-HHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------TCCSSCCCTT
T ss_pred             cccHHHHHHHcCCH-HHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------CCCCCCCCCC
Confidence            56899999999997 8888888874   34555 7899999999999975    599999998       7899999999


Q ss_pred             CCChhhHHHHHhhcCc------HHHHHHHHHHCCCcccccccCCC-hHHHHHHHcCC-----hhHHHHHHh-cCcccccc
Q 037168          141 KTNVLHIAILSLHFGC------IEIVKDILSVYPQAVEHIDDEGR-NILHVAIKYRQ-----LEIFERVVQ-MEIPLRRL  207 (466)
Q Consensus       141 g~TpLh~A~~a~~~g~------~~~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~~~-----~~iv~~Ll~-~g~~~~~~  207 (466)
                      |+||||+|+   ..|+      .++++.|++ .|+++|.+|+.|+ ||||+|+..+.     .+++++|++ +|++    
T Consensus        75 g~TpLh~a~---~~~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad----  146 (186)
T 3t8k_A           75 GTTLFFPLF---QGGGNDITGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ----  146 (186)
T ss_dssp             CCCTHHHHH---HHCTTCHHHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC----
T ss_pred             CCcHHHHHH---HcCCcchhhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC----
Confidence            999999554   4444      689999998 8999999999999 99999999553     569999999 9999    


Q ss_pred             cccccCCCCCchhhhhccCcchhhhcc
Q 037168          208 VRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       208 ~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      ++.+|..|+||||+|++.++.++++.|
T Consensus       147 ~~~~d~~G~TpL~~A~~~~~~~~v~~L  173 (186)
T 3t8k_A          147 LLIKDKWGLTALEFVKRCQKPIALKMM  173 (186)
T ss_dssp             TTCCCTTSCCHHHHHHTTTCHHHHHHH
T ss_pred             CcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence            999999999999999999999888666

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.91  E-value=9.1e-24  Score=175.63  Aligned_cols=126  Identities=27%  Similarity=0.357  Sum_probs=84.3

Q ss_pred             CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168           65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV  144 (466)
Q Consensus        65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp  144 (466)
                      +|+||||+|++.|+. +++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.       +.+++.+|..|.||
T Consensus         1 ~g~t~L~~A~~~~~~-~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~   71 (126)
T 1n0r_A            1 NGRTPLHLAARNGHL-EVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-------GADVNAKDKNGRTP   71 (126)
T ss_dssp             CCCCHHHHHHHHTCH-HHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCH
T ss_pred             CCccHHHHHHHcCcH-HHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc-------CCCCcccCCCCCcH
Confidence            366666666666664 666666666 455666666666666666666666666666665       44556666667777


Q ss_pred             hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      ||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++
T Consensus        72 l~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           72 LH---LAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HH---HHHHcChHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            77   5556667777777766 5666677777777777777777777777777776653

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.91  E-value=5.3e-24  Score=180.47  Aligned_cols=126  Identities=17%  Similarity=0.185  Sum_probs=78.2

Q ss_pred             CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168           63 NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT  142 (466)
Q Consensus        63 d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~  142 (466)
                      ...|.||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.       +.+++.+|.+|.
T Consensus        11 ~~~~~t~l~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~d~~g~   81 (136)
T 2jab_A           11 GSDLGKKLLEAARAGQD-DEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN-------GADVNAVDAIGF   81 (136)
T ss_dssp             -CHHHHHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTCC
T ss_pred             cccccHHHHHHHHhCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCcCCCCCC
Confidence            34456666666666664 666666665 455666666666666666666666666666665       445555666666


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcC
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQME  201 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g  201 (466)
                      ||||   .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|
T Consensus        82 t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           82 TPLH---LAAFIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             CHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             CHHH---HHHHcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            6666   4445566666666666 56666666666666666666666666666666554

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.90  E-value=5e-24  Score=180.76  Aligned_cols=124  Identities=17%  Similarity=0.173  Sum_probs=112.4

Q ss_pred             CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168           96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID  175 (466)
Q Consensus        96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d  175 (466)
                      .+|.+|+||||+|+..|+.+++++|++.       +.+++.+|..|+||||   .|+..|+.++++.|++ .+.+++.+|
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~   73 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQN-------GSDPNVKDHAGWTPLH---EACNHGHLKVVELLLQ-HKALVNTTG   73 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCC
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCcCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCcccCcC
Confidence            6788999999999999999999999988       5677888899999999   6678899999999998 788999999


Q ss_pred             cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          176 DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       176 ~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      ..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..+..++++++
T Consensus        74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~l~~l  128 (137)
T 3c5r_A           74 YQNDSPLHDAAKNGHVDIVKLLLSYGAS----RNAVNIFGLRPVDYTDDESMKSLLLLP  128 (137)
T ss_dssp             GGGCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence            9999999999999999999999999988    899999999999999998888777665

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.90  E-value=1.5e-23  Score=177.64  Aligned_cols=126  Identities=16%  Similarity=0.100  Sum_probs=115.0

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE  102 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~  102 (466)
                      .....|.||||.||..|+.++++.|++     .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|.+|+
T Consensus         9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~d~~g~   81 (136)
T 2jab_A            9 HHGSDLGKKLLEAARAGQDDEVRILMA-----NGADVNAKDEYGLTPLYLATAHGHL-EIVEVLLKN-GADVNAVDAIGF   81 (136)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTCC
T ss_pred             cccccccHHHHHHHHhCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcCCCCCC
Confidence            346678999999999999999999999     4566889999999999999999996 999999988 778999999999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      ||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++
T Consensus        82 t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~tpl~---~A~~~~~~~~~~~Ll~  134 (136)
T 2jab_A           82 TPLHLAAFIGHLEIAEVLLKH-------GADVNAQDKFGKTAFD---ISIGNGNEDLAEILQK  134 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-------CCCCcCcCCCCCCHHH---HHHHCCCHHHHHHHHH
Confidence            999999999999999999998       6788899999999999   7778999999999997

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.90  E-value=7.7e-24  Score=198.15  Aligned_cols=144  Identities=16%  Similarity=0.101  Sum_probs=125.8

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCC
Q 037168           24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGE  102 (466)
Q Consensus        24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~  102 (466)
                      .+.+|+||||.|++.|+.++++.|++ +     .+++.+|..|+||||+|+..|+. +++++|+++ +.+++.+| ..|+
T Consensus        41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-----~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~g~  112 (244)
T 3ui2_A           41 VVSEYETPWWTAARKADEQALSQLLE-D-----RDVDAVDENGRTALLFVAGLGSD-KCVRLLAEA-GADLDHRDMRGGL  112 (244)
T ss_dssp             HHHHHHHHHHHHHTTTCHHHHHHTTT-T-----CCTTCBCTTSCBHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCSSSCC
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHc-C-----CCCCCcCCCCCCHHHHHHHCCCH-HHHHHHHHc-CCCCCcCCCCCCC
Confidence            34578999999999999999999998 3     35788999999999999999996 999999998 77888888 8899


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL  182 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L  182 (466)
                      ||||+|+..|+.+++++|+++       +++++.+|.+|+||||+|+   .         +.         .+..+.|||
T Consensus       113 t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~d~~g~t~l~~A~---~---------~~---------~~~~~~~~l  164 (244)
T 3ui2_A          113 TALHMAAGYVRPEVVEALVEL-------GADIEVEDERGLTALELAR---E---------IL---------KTTPKGNPM  164 (244)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCHHHHHH---H---------HH---------TTCCCSSHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCcHHHHHH---H---------HH---------hccCCCCHH
Confidence            999999999999999999998       6788899999999999554   2         11         135789999


Q ss_pred             HHHHHcCChhHHHHHHhcCcc
Q 037168          183 HVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       183 h~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      |+|+..|+.+++++|++++.+
T Consensus       165 ~~a~~~g~~~iv~~L~~~~~~  185 (244)
T 3ui2_A          165 QFGRRIGLEKVINVLEGQVFE  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHEE
T ss_pred             HHHHHcChHHHHHHHHHhccc
Confidence            999999999999999987655

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.90  E-value=4.4e-23  Score=171.42  Aligned_cols=125  Identities=26%  Similarity=0.337  Sum_probs=114.9

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL  106 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh  106 (466)
                      +|+||||.|++.|+.+++++|++.     +.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|.||||
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~g~t~l~   73 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEA-----GADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEA-GADVNAKDKNGRTPLH   73 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHH-----TCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHHcCcH-HHHHHHHHc-CCCCcccCCCCCcHHH
Confidence            589999999999999999999994     456788999999999999999996 999999998 7789999999999999


Q ss_pred             HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCC
Q 037168          107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQ  169 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~  169 (466)
                      +|+..|+.+++++|++.       +.+++.+|.+|.||||   .|+..|+.+++++|++ +|+
T Consensus        74 ~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~l~---~A~~~~~~~~~~~Ll~-~Ga  125 (126)
T 1n0r_A           74 LAARNGHLEVVKLLLEA-------GADVNAKDKNGRTPLH---LAARNGHLEVVKLLLE-AGA  125 (126)
T ss_dssp             HHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-HTC
T ss_pred             HHHHcChHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHcCcHHHHHHHHH-cCC
Confidence            99999999999999998       6678889999999999   7778999999999998 444

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.89  E-value=5.6e-25  Score=205.90  Aligned_cols=167  Identities=15%  Similarity=0.063  Sum_probs=140.7

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168           26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL  105 (466)
Q Consensus        26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL  105 (466)
                      ..+.+++.+++..|+.+.+..+..     .+   ...+.+|+||||+|++.|+. ++++.|++  +.+++.+|..|+|||
T Consensus        13 ~~~~~~~l~~~~~g~~~~~~~~~~-----~~---~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~--~~~~~~~d~~g~t~L   81 (244)
T 3ui2_A           13 GEGAMEYLIEWKDGHSPSWVPSSY-----IA---ADVVSEYETPWWTAARKADE-QALSQLLE--DRDVDAVDENGRTAL   81 (244)
T ss_dssp             TTTEEEEEEEESSCCCCEEEEGGG-----SC---HHHHHHHHHHHHHHHTTTCH-HHHHHTTT--TCCTTCBCTTSCBHH
T ss_pred             CCCccHHHHHHHcCCCcccccccc-----cc---cccccCCCCHHHHHHHcCCH-HHHHHHHc--CCCCCCcCCCCCCHH
Confidence            346677777777777666554443     12   22346799999999999997 99999998  678999999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV  184 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~  184 (466)
                      |+|+..|+.+++++|+++       +.+++.+| .+|+||||   .|+..|+.++++.|++ ++++++.+|..|+||||+
T Consensus        82 ~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~g~t~L~---~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~  150 (244)
T 3ui2_A           82 LFVAGLGSDKCVRLLAEA-------GADLDHRDMRGGLTALH---MAAGYVRPEVVEALVE-LGADIEVEDERGLTALEL  150 (244)
T ss_dssp             HHHHHHTCHHHHHHHHHT-------TCCTTCCCSSSCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHH
T ss_pred             HHHHHCCCHHHHHHHHHc-------CCCCCcCCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHH
Confidence            999999999999999998       67888888 78999999   7778999999999999 799999999999999999


Q ss_pred             HHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccC
Q 037168          185 AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       185 A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      |+..+                     .+..|.||||+|+..|+.++++.|.
T Consensus       151 A~~~~---------------------~~~~~~~~l~~a~~~g~~~iv~~L~  180 (244)
T 3ui2_A          151 AREIL---------------------KTTPKGNPMQFGRRIGLEKVINVLE  180 (244)
T ss_dssp             HHHHH---------------------TTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH---------------------hccCCCCHHHHHHHcChHHHHHHHH
Confidence            98622                     1256899999999999999887774

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.89  E-value=1.8e-23  Score=186.68  Aligned_cols=141  Identities=15%  Similarity=0.079  Sum_probs=122.4

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCC
Q 037168           24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGE  102 (466)
Q Consensus        24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~  102 (466)
                      .+.+|+||||.|++.|+.++++.|++ +     .+++.+|..|+||||+|+..|+. +++++|++. +.+++.+| ..|+
T Consensus        40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-----~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~~g~  111 (183)
T 3deo_A           40 VVSEYETPWWTAARKADEQALSQLLE-D-----RDVDAVDENGRTALLFVAGLGSD-KCVRLLAEA-GADLDHRDMRGGL  111 (183)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHTT-T-----SCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCSSSSC
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHh-c-----CCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcCCCCCCC
Confidence            35678999999999999999999998 3     35788999999999999999996 999999988 67788888 8999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL  182 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L  182 (466)
                      ||||+|+..|+.+++++|+++       +++++.+|.+|+||||+|+   ..+                  ....+.++|
T Consensus       112 tpL~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~~A~---~~~------------------~~~~~~~~l  163 (183)
T 3deo_A          112 TALHMAAGYVRPEVVEALVEL-------GADIEVEDERGLTALELAR---EIL------------------KTTPKGNPM  163 (183)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHH-------TCCTTCCCTTSCCHHHHHH---HHH------------------HTCCCCSHH
T ss_pred             CHHHHHHhcCcHHHHHHHHHc-------CCCCcCCCCCCCCHHHHHH---Hhc------------------cCcccccHH
Confidence            999999999999999999998       6788899999999999554   311                  124678999


Q ss_pred             HHHHHcCChhHHHHHHhc
Q 037168          183 HVAIKYRQLEIFERVVQM  200 (466)
Q Consensus       183 h~A~~~~~~~iv~~Ll~~  200 (466)
                      ++|+..|+.+++++|.++
T Consensus       164 ~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          164 QFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             HHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHcCHHHHHHHHHHh
Confidence            999999999999999765

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.89  E-value=6.9e-24  Score=179.89  Aligned_cols=126  Identities=20%  Similarity=0.169  Sum_probs=84.6

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE  102 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~  102 (466)
                      ..|.+|+||||+|+..|+.+++++|++     .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|..|+
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~g~   77 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQ-----NGSDPNVKDHAGWTPLHEACNHGHL-KVVELLLQH-KALVNTTGYQND   77 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCGGGC
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCcCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCcccCcCCCCC
Confidence            456677777777777777777777777     3445666677777777777777765 777777766 556677777777


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      ||||+|+..|+.+++++|++.       +.+++.+|.+|.||||   .|+..+..++++.+.+
T Consensus        78 t~L~~A~~~~~~~~v~~Ll~~-------ga~~~~~~~~g~tpl~---~A~~~~~~~~l~~l~~  130 (137)
T 3c5r_A           78 SPLHDAAKNGHVDIVKLLLSY-------GASRNAVNIFGLRPVD---YTDDESMKSLLLLPEK  130 (137)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCGGG---GCCCHHHHHHHSCC--
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHhhccHHHHHhhccc
Confidence            777777777777777777766       4566666777777777   5555566666655544

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.89  E-value=1.1e-24  Score=216.09  Aligned_cols=177  Identities=11%  Similarity=0.088  Sum_probs=142.8

Q ss_pred             CCcHHHHHHH-cCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCC--cccCcCCCCChH
Q 037168           28 DDTVLHMATY-TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPG--LLGMRNNNGETA  104 (466)
Q Consensus        28 g~T~Lh~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~--~~~~~d~~G~tp  104 (466)
                      +.+++++|.. .++.++++++++.            +.+++||||+|++.|+. +++++|++++..  ..+..|..|.||
T Consensus        65 ~ll~~~~a~~~~~~~~~~~~l~~~------------g~~~~T~Lh~Aa~~G~~-e~v~~Ll~~ga~~~~~~~~~~~~~tp  131 (376)
T 2aja_A           65 QLLCLYYAHYNRNAKQLWSDAHKK------------GIKSEVICFVAAITGCS-SALDTLCLLLTSDEIVKVIQAENYQA  131 (376)
T ss_dssp             HHHHHHHHHTTTTCTTHHHHHHHH------------TCCHHHHHHHHHHHCCH-HHHHHHTTC--CCSSCC--CHHHHHH
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHc------------CCCcCCHHHHHHHcCCH-HHHHHHHHcCCcHHHHHHhccCCCCH
Confidence            4568888877 5788899988884            33456999999999997 999999988431  223456678999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccc--cccCCChHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEH--IDDEGRNIL  182 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~--~d~~G~t~L  182 (466)
                      ||+|+..|+.+++++|++++++.    ...+..+.+ .||||   .|+..|+.+++++|++ .+++++.  +|..|+|||
T Consensus       132 L~~Aa~~G~~eiv~~Ll~~gad~----~~~~i~~~~-~TpLh---~Aa~~G~~eiv~~Ll~-~ga~~~~~~~d~~g~TpL  202 (376)
T 2aja_A          132 FRLAAENGHLHVLNRLCELAPTE----IMAMIQAEN-YHAFR---LAAENGHLHVLNRLCE-LAPTEATAMIQAENYYAF  202 (376)
T ss_dssp             HHHHHHTTCHHHHHHHHHSCTTT----HHHHHSHHH-HHHHH---HHHHTTCHHHHHHHHH-SCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHhCCCCc----cccccCCCC-CCHHH---HHHHCCCHHHHHHHHH-cCCccchhccCCCCCCHH
Confidence            99999999999999999984310    002333333 99999   7789999999999999 7888887  899999999


Q ss_pred             HHHH-HcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCCh
Q 037168          183 HVAI-KYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGP  237 (466)
Q Consensus       183 h~A~-~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~  237 (466)
                      |+|+ .+|+.+++++|+++|++           |+||||+|+..|+.+++++|...
T Consensus       203 ~~Aa~~~G~~eiv~~Ll~~ga~-----------~~taL~~Aa~~g~~evv~lL~~~  247 (376)
T 2aja_A          203 RWAAVGRGHHNVINFLLDCPVM-----------LAYAEIHEFEYGEKYVNPFIARH  247 (376)
T ss_dssp             HHHHSTTCCHHHHHHHTTSHHH-----------HHHHHHCTTTTTTTTHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHhCCCc-----------cchHHHHHHHCCCHHHHHHHHhc
Confidence            9999 99999999999997742           88999999999999998887443

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.88  E-value=1.7e-22  Score=194.97  Aligned_cols=140  Identities=14%  Similarity=0.082  Sum_probs=121.0

Q ss_pred             CChHHHHHHHcCCcHHHHHHHHHhCCCcccC------cCCCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCccccc
Q 037168           66 GNTILHETATSNHALPVADKVLRKAPGLLGM------RNNNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLPFL  136 (466)
Q Consensus        66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~  136 (466)
                      +.++||.|+..|+. +.++.|++. +.+++.      .|..|+||||+|+..   |+.+++++|++.       +++++.
T Consensus       151 ~~~~L~~A~~~g~~-~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------gadvn~  221 (301)
T 2b0o_E          151 EPQRLWTAICNRDL-LSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GGHLDA  221 (301)
T ss_dssp             CHHHHHHHHHTTCH-HHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-------SSCTTC
T ss_pred             hHHHHhhhhhccCH-HHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-------CCCCCC
Confidence            45779999999997 899999977 666777      699999999999997   899999999999       678889


Q ss_pred             ccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC
Q 037168          137 HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN  216 (466)
Q Consensus       137 ~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~  216 (466)
                      +|.+|+||||   .|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|+++|++          .|+
T Consensus       222 ~d~~G~TpLh---~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~----------~g~  287 (301)
T 2b0o_E          222 KAADGNTALH---YAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----------TFA  287 (301)
T ss_dssp             CCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----------TTS
T ss_pred             CCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----------CCC
Confidence            9999999999   7778999999999999 8999999999999999999999999999999998864          589


Q ss_pred             CchhhhhccCcc
Q 037168          217 TIFHMAGIKRKD  228 (466)
Q Consensus       217 TpLHlAa~~~~~  228 (466)
                      ||||+|++.|+.
T Consensus       288 tpLh~A~~~g~~  299 (301)
T 2b0o_E          288 FPLHVDYSWVIS  299 (301)
T ss_dssp             SCCC--------
T ss_pred             ChhHHHHhcCCc
Confidence            999999988753

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=2.5e-23  Score=191.53  Aligned_cols=131  Identities=18%  Similarity=0.129  Sum_probs=77.1

Q ss_pred             ccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCC
Q 037168           61 RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND  140 (466)
Q Consensus        61 ~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~  140 (466)
                      ..|..|.||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++..      +.+++.+|.+
T Consensus        68 ~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------g~~~~~~d~~  139 (222)
T 3ehr_A           68 EQAESIDNPLHEAAKRGNL-SWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP------NIELNQQNKL  139 (222)
T ss_dssp             HHEEEESCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTST------TCCCCCCCTT
T ss_pred             ccccccccccccccccCcH-HHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCC------CCCccccCCC
Confidence            3455566666666666664 666666665 4556666666666666666666666666666541      3455566666


Q ss_pred             CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      |+||||   .|+..|+.++++.|++ .+++++.+|..|+||||+|+..++.++++.|++.++.
T Consensus       140 g~tpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~  198 (222)
T 3ehr_A          140 GDTALH---AAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV  198 (222)
T ss_dssp             SCCHHH---HHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred             CCCHHH---HHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence            666666   4445566666666666 4666666666666666666666666666666666654

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.88  E-value=6.8e-23  Score=170.38  Aligned_cols=115  Identities=14%  Similarity=0.086  Sum_probs=92.5

Q ss_pred             CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccC
Q 037168           98 NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE  177 (466)
Q Consensus        98 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~  177 (466)
                      +..|.||||+|+..|+.+++++|++.       +.+++.+|..|+||||   .|+..|+.++++.|++ .+.+++.+|..
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-------~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~d~~   72 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAK-------GEDVNRTLEGGRKPLH---YAADCGQLEILEFLLL-KGADINAPDKH   72 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHT-------TCCTTSCCTTSSCHHH---HHHHTTCHHHHHHHHT-TTCCTTCCCTT
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHc-------CCCcCccCCCCCcHHH---HHHHcCCHHHHHHHHH-cCCCCCcCCCC
Confidence            45677888888888888888888887       5567777888888888   6667888888888887 77888888888


Q ss_pred             CChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       178 G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                      |+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|...+.
T Consensus        73 g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~  118 (123)
T 3aaa_C           73 HITPLLSAVYEGHVSCVKLLLSKGAD----KTVKGPDGLTAFEATDNQAI  118 (123)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCCHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHhCCHHH
Confidence            88888888888888888888888887    78888888888888865443

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.88  E-value=3.4e-23  Score=184.85  Aligned_cols=165  Identities=16%  Similarity=0.098  Sum_probs=133.6

Q ss_pred             HHHcCCHHHHHHHHHhCCCCc------hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHH
Q 037168           35 ATYTKKSDLVIKLLDELPDQS------LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRA  108 (466)
Q Consensus        35 A~~~g~~~~v~~Ll~~~~~~~------~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A  108 (466)
                      |++.|..+.+++|++......      .......|.+|+||||+|+..|+. ++++.|++  +.+++.+|..|+||||+|
T Consensus         7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~--~~~~~~~d~~g~t~L~~A   83 (183)
T 3deo_A            7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADE-QALSQLLE--DRDVDAVDENGRTALLFV   83 (183)
T ss_dssp             EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCH-HHHHHHTT--TSCTTCCCTTSCCHHHHH
T ss_pred             HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCH-HHHHHHHh--cCCCCCcCCCCCCHHHHH
Confidence            344555555666664321110      111223467899999999999997 99999998  678999999999999999


Q ss_pred             HHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          109 ARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       109 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      +..|+.+++++|++.       +.+++.+| .+|+||||   .|+..|+.++++.|++ .+++++.+|..|+||||+|++
T Consensus        84 ~~~~~~~~v~~Ll~~-------ga~~~~~~~~~g~tpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~  152 (183)
T 3deo_A           84 AGLGSDKCVRLLAEA-------GADLDHRDMRGGLTALH---MAAGYVRPEVVEALVE-LGADIEVEDERGLTALELARE  152 (183)
T ss_dssp             HHHTCHHHHHHHHHT-------TCCTTCCCSSSSCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHcCCHHHHHHHHHc-------CCCCCcCCCCCCCCHHH---HHHhcCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHH
Confidence            999999999999998       66788888 88999999   7778999999999999 689999999999999999987


Q ss_pred             cCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      .++.                     ..+.|||++|++.+..++++.|
T Consensus       153 ~~~~---------------------~~~~~~l~~a~~~~~~~i~~~L  178 (183)
T 3deo_A          153 ILKT---------------------TPKGNPMQFGRRIGLEKVINVL  178 (183)
T ss_dssp             HHHT---------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred             hccC---------------------cccccHHHHHHHcCHHHHHHHH
Confidence            4322                     3567999999999988888665

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.88  E-value=1.2e-22  Score=168.85  Aligned_cols=118  Identities=17%  Similarity=0.119  Sum_probs=103.9

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      +..|+||||.|+..|+.++++.|++     .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|..|+||
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~-----~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~d~~g~tp   76 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVA-----KGEDVNRTLEGGRKPLHYAADCGQL-EILEFLLLK-GADINAPDKHHITP   76 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHH-----TTCCTTSCCTTSSCHHHHHHHTTCH-HHHHHHHTT-TCCTTCCCTTSCCH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHH-----cCCCcCccCCCCCcHHHHHHHcCCH-HHHHHHHHc-CCCCCcCCCCCCCH
Confidence            5678999999999999999999999     4556888999999999999999996 999999988 78899999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEI  159 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~  159 (466)
                      ||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|...+..++
T Consensus        77 L~~A~~~~~~~~v~~Ll~~-------ga~~~~~~~~g~t~l~---~A~~~~~~~l  121 (123)
T 3aaa_C           77 LLSAVYEGHVSCVKLLLSK-------GADKTVKGPDGLTAFE---ATDNQAIKAL  121 (123)
T ss_dssp             HHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HCCCHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HhCCHHHHHH
Confidence            9999999999999999998       6788899999999999   6655444444

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.87  E-value=1.7e-22  Score=195.02  Aligned_cols=142  Identities=17%  Similarity=0.146  Sum_probs=118.5

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhc------cCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCcccC
Q 037168           26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTR------QNKAGNTILHETATS---NHALPVADKVLRKAPGLLGM   96 (466)
Q Consensus        26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~------~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~   96 (466)
                      ..+.++||.|+..|+.+.++.|++.+     .+++.      .|..|+||||+|+..   |+. +++++|++. +++++.
T Consensus       149 ~~~~~~L~~A~~~g~~~~v~~ll~~g-----~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~-~iv~~Ll~~-gadvn~  221 (301)
T 2b0o_E          149 TPEPQRLWTAICNRDLLSVLEAFANG-----QDFGQPLPGPDAQAPEELVLHLAVKVANQASL-PLVDFIIQN-GGHLDA  221 (301)
T ss_dssp             C-CHHHHHHHHHTTCHHHHHHHHHTT-----CCTTSCEECSSSCSCEECHHHHHHHTCCTTTH-HHHHHHHHH-SSCTTC
T ss_pred             CchHHHHhhhhhccCHHHHHHHHhcC-----CcccccCCCcccCCCCccHHHHHHHhcccCcH-HHHHHHHhc-CCCCCC
Confidence            33557899999999999999999954     44555      689999999999997   775 999999999 788999


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc
Q 037168           97 RNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD  176 (466)
Q Consensus        97 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~  176 (466)
                      +|.+|+||||+|+..|+.+++++|++.       +++++.+|.+|+||||   .|+..|+.+++++|++ .++      .
T Consensus       222 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~-------gad~~~~d~~G~TpL~---~A~~~~~~~iv~~Ll~-~ga------~  284 (301)
T 2b0o_E          222 KAADGNTALHYAALYNQPDCLKLLLKG-------RALVGTVNEAGETALD---IARKKHHKECEELLEQ-AQA------G  284 (301)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCCSCCCTTSCCHHH---HHHHHTCHHHHHHHHH-HHH------H
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHH-hcC------C
Confidence            999999999999999999999999998       7788999999999999   6778899999999998 343      2


Q ss_pred             CCChHHHHHHHcCCh
Q 037168          177 EGRNILHVAIKYRQL  191 (466)
Q Consensus       177 ~G~t~Lh~A~~~~~~  191 (466)
                      .|.||||+|+.+|+.
T Consensus       285 ~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          285 TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             TTSSCCC--------
T ss_pred             CCCChhHHHHhcCCc
Confidence            689999999998864

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.87  E-value=7.7e-23  Score=188.22  Aligned_cols=129  Identities=15%  Similarity=0.095  Sum_probs=111.4

Q ss_pred             cCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc
Q 037168           95 GMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI  174 (466)
Q Consensus        95 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~  174 (466)
                      +..|.+|.||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++..+.+++.+
T Consensus        67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~~~g~~~~~~  136 (222)
T 3ehr_A           67 AEQAESIDNPLHEAAKRGNLSWLRECLDN-------RVGVNGLDKAGSTALY---WACHGGHKDIVEMLFTQPNIELNQQ  136 (222)
T ss_dssp             HHHEEEESCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHTTSTTCCCCCC
T ss_pred             cccccccccccccccccCcHHHHHHHHhC-------CCCccccCCCCCCHHH---HHHHcCCHHHHHHHHcCCCCCcccc
Confidence            34567899999999999999999999987       6678888999999999   6778899999999998558999999


Q ss_pred             ccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCCh
Q 037168          175 DDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGP  237 (466)
Q Consensus       175 d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~  237 (466)
                      |..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+..+..++++.+.+.
T Consensus       137 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~  195 (222)
T 3ehr_A          137 NKLGDTALHAAAWKGYADIVQLLLAKGAR----TDLRNIEKKLAFDMATNAACASLLKKKQGT  195 (222)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHHTCC----SCCCCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CccccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence            99999999999999999999999999988    889999999999999999988888777543

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.86  E-value=2.3e-21  Score=184.91  Aligned_cols=178  Identities=18%  Similarity=0.115  Sum_probs=136.5

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCch-------------hhhh-------------ccCCCCChHHHHHHHcC
Q 037168           24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSL-------------DKMT-------------RQNKAGNTILHETATSN   77 (466)
Q Consensus        24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~-------------~~~~-------------~~d~~G~TpLh~Aa~~g   77 (466)
                      .|..+.++|+.+...|+..+.+.+-...+....             ..+.             ..+....++||.|+..|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~  141 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR  141 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence            577788999999999998877766544332110             0000             00111236889999999


Q ss_pred             CcHHHHHHHHHhCCCc-----ccCcCCCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHH
Q 037168           78 HALPVADKVLRKAPGL-----LGMRNNNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAI  149 (466)
Q Consensus        78 ~~~~~v~~Ll~~~~~~-----~~~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~  149 (466)
                      +. +.++.+++.+...     ++..|..|+||||+|+..   |+.+++++|++.       +++++.+|.+|+||||   
T Consensus       142 d~-~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-------ga~in~~d~~g~TpLh---  210 (278)
T 1dcq_A          142 DI-FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SGNLDKQTGKGSTALH---  210 (278)
T ss_dssp             CH-HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CSCTTCCCTTCCCHHH---
T ss_pred             cc-HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-------CCCccccCCCCCCHHH---
Confidence            86 7888888774321     445588899999999998   889999999988       6778888999999999   


Q ss_pred             HHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          150 LSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       150 ~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      .|+..|+.++++.|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++            .+++|.++..
T Consensus       211 ~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~------------~~~~~~~v~~  273 (278)
T 1dcq_A          211 YCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG------------RFNSHVHVEY  273 (278)
T ss_dssp             HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT------------CCCSSCCCCC
T ss_pred             HHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCCcceeeec
Confidence            6778899999999998 8889999999999999999999999999999988753            5677777654

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.83  E-value=1.1e-20  Score=186.59  Aligned_cols=150  Identities=14%  Similarity=0.111  Sum_probs=116.2

Q ss_pred             cCCCCChHHHHHHHc-CCcHHHHHHHHHhCCCcccCcC--CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc
Q 037168           62 QNKAGNTILHETATS-NHALPVADKVLRKAPGLLGMRN--NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR  138 (466)
Q Consensus        62 ~d~~G~TpLh~Aa~~-g~~~~~v~~Ll~~~~~~~~~~d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d  138 (466)
                      .+..+.|+||.|+.. |+. ++++.|+++ +.+++..|  ..|.||||+|+..|+.+++++|+++       +++++.+|
T Consensus       195 ~~~~~~t~L~~Aa~~~g~~-~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------Gadvn~~d  265 (368)
T 3jue_A          195 GSLHPGALLFRASGHPPSL-PTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-------GANVNQAD  265 (368)
T ss_dssp             --CCHHHHHHHHTSSSCCH-HHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCC
T ss_pred             ccCCCCcHHHHHHHccCCH-HHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc-------CCCCCCCC
Confidence            344567899999999 886 999999987 77899888  8999999999999999999999998       67888999


Q ss_pred             CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168          139 NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI  218 (466)
Q Consensus       139 ~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp  218 (466)
                      .+|+||||   .|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|++.+.. .......+..+.|+
T Consensus       266 ~~G~TpLh---~A~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~-~~~~~~~~~~~~t~  340 (368)
T 3jue_A          266 SAGRGPLH---HATILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR-EAEAAQGQAGDETY  340 (368)
T ss_dssp             TTSCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------
T ss_pred             CCCCCHHH---HHHHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-cccccccCCCCCCH
Confidence            99999999   6778899999999998 7999999999999999999999999999999987643 22245667888999


Q ss_pred             hhhhhcc
Q 037168          219 FHMAGIK  225 (466)
Q Consensus       219 LHlAa~~  225 (466)
                      ++++...
T Consensus       341 l~i~~~~  347 (368)
T 3jue_A          341 LDIFRDF  347 (368)
T ss_dssp             -------
T ss_pred             HHHHHHH
Confidence            9988754

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.82  E-value=2.5e-20  Score=184.13  Aligned_cols=148  Identities=11%  Similarity=0.112  Sum_probs=114.5

Q ss_pred             CCCCCcHHHHHHHc-CCHHHHHHHHHhCCCCchhhhhccC--CCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCC
Q 037168           25 TIHDDTVLHMATYT-KKSDLVIKLLDELPDQSLDKMTRQN--KAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNG  101 (466)
Q Consensus        25 ~~~g~T~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~d--~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G  101 (466)
                      +..+.|+||.|+.. |+.++++.|++     ++++++..|  ..|.||||+|+..|+. +++++|++. +++++.+|..|
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~-----~Gadvn~~~~~~~g~TpLh~Aa~~g~~-~iv~~LL~~-Gadvn~~d~~G  268 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALA-----HGADVNWVNGGQDNATPLIQATAANSL-LACEFLLQN-GANVNQADSAG  268 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHH-----TTCCTTCCCTTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTS
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHH-----cCCCCCccccccCCCCHHHHHHHCCCH-HHHHHHHHc-CCCCCCCCCCC
Confidence            34567899999999 99999999999     556677777  8999999999999996 999999998 78899999999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHC--CCcccccccCCC
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVY--PQAVEHIDDEGR  179 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~--~~~~~~~d~~G~  179 (466)
                      +||||+|+..|+.+++++|+++       +++++.+|.+|.||||   .|+..|+.+++++|++..  .......+..+.
T Consensus       269 ~TpLh~A~~~g~~~~v~~LL~~-------Gad~~~~d~~G~TpL~---~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~  338 (368)
T 3jue_A          269 RGPLHHATILGHTGLACLFLKR-------GADLGARDSEGRDPLT---IAMETANADIVTLLRLAKMREAEAAQGQAGDE  338 (368)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHHHC-------------
T ss_pred             CCHHHHHHHcCcHHHHHHHHHC-------cCCCCCcCCCCCCHHH---HHHHCCCHHHHHHHHHcCCCcccccccCCCCC
Confidence            9999999999999999999998       7788999999999999   777899999999999753  233345567788


Q ss_pred             hHHHHHHHcC
Q 037168          180 NILHVAIKYR  189 (466)
Q Consensus       180 t~Lh~A~~~~  189 (466)
                      |+++++....
T Consensus       339 t~l~i~~~~~  348 (368)
T 3jue_A          339 TYLDIFRDFS  348 (368)
T ss_dssp             ----------
T ss_pred             CHHHHHHHHH
Confidence            9988876653

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.82  E-value=6.1e-20  Score=144.55  Aligned_cols=91  Identities=27%  Similarity=0.373  Sum_probs=84.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL  106 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh  106 (466)
                      +|+||||+|+..|+.+++++|++     .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|.+|+||||
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~d~~g~t~l~   73 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLE-----AGADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEA-GADVNAKDKNGRTPLH   73 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCccCCCCCCHHH
Confidence            58999999999999999999999     5567899999999999999999996 999999998 7889999999999999


Q ss_pred             HHHHcCCHHHHHHHHhcc
Q 037168          107 RAARYGKVDIFNFLAGKI  124 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~  124 (466)
                      +|+..|+.+++++|++.+
T Consensus        74 ~A~~~~~~~~~~~Ll~~g   91 (93)
T 1n0q_A           74 LAARNGHLEVVKLLLEAG   91 (93)
T ss_dssp             HHHHTTCHHHHHHHHHTT
T ss_pred             HHHHcCCHHHHHHHHHcC
Confidence            999999999999999873

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.81  E-value=6.9e-20  Score=144.21  Aligned_cols=93  Identities=28%  Similarity=0.369  Sum_probs=73.6

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168          100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR  179 (466)
Q Consensus       100 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~  179 (466)
                      +|+||||+|+..|+.+++++|++.       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~n~~d~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~   69 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEA-------GADVNAKDKNGRTPLH---LAARNGHLEVVKLLLE-AGADVNAKDKNGR   69 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSC
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCC
Confidence            477888888888888888888877       5677777888888888   6667788888888887 6778888888888


Q ss_pred             hHHHHHHHcCChhHHHHHHhcCcc
Q 037168          180 NILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       180 t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      ||||+|+..|+.+++++|+++|++
T Consensus        70 t~l~~A~~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           70 TPLHLAARNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCC
Confidence            888888888888888888887753

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.81  E-value=3.8e-20  Score=151.67  Aligned_cols=109  Identities=24%  Similarity=0.232  Sum_probs=89.8

Q ss_pred             CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168           96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID  175 (466)
Q Consensus        96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d  175 (466)
                      .+|.+|+||||+|+..|+.+++++|++.       +.+++.+|..|+||||   .|+..|+.++++.|++ .+.+++.+|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~d   72 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK-------GADVNARSKDGNTPLH---LAAKNGHAEIVKLLLA-KGADVNARS   72 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTT-------TCCSSCCCSSSCCTTH---HHHTTTCHHHHHHHTT-TTCCTTCCC
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCcHHHHHHHHH-cCCCCcccC
Confidence            4678888888888888888888888887       5667778888888888   6668888888888887 688888888


Q ss_pred             cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCch
Q 037168          176 DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIF  219 (466)
Q Consensus       176 ~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL  219 (466)
                      ..|+||||+|+..++.+++++|+++|++    +|.+|..|.||-
T Consensus        73 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~----~n~~~~~~~~~~  112 (115)
T 2l6b_A           73 KDGNTPEHLAKKNGHHEIVKLLDAKGAD----VNARSWGSSHHH  112 (115)
T ss_dssp             TTCCCTTHHHHTTTCHHHHHHHHTTSSS----HHHHSCCCC---
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHcCCC----CCcCCccccccc
Confidence            8888888888888888888888888888    888888888873

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.80  E-value=4.9e-20  Score=151.01  Aligned_cols=109  Identities=25%  Similarity=0.241  Sum_probs=99.2

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168           23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE  102 (466)
Q Consensus        23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~  102 (466)
                      ..|.+|+||||+|+..|+.++++.|++     .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~d~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~d~~g~   76 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLS-----KGADVNARSKDGNTPLHLAAKNGHA-EIVKLLLAK-GADVNARSKDGN   76 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTT-----TTCCSSCCCSSSCCTTHHHHTTTCH-HHHHHHTTT-TCCTTCCCTTCC
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHc-CCCCcccCCCCC
Confidence            468899999999999999999999999     4566888999999999999999996 999999998 778999999999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168          103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL  145 (466)
Q Consensus       103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL  145 (466)
                      ||||+|+..|+.+++++|+++       +++++.++..|.||-
T Consensus        77 tpl~~A~~~~~~~~~~~Ll~~-------ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           77 TPEHLAKKNGHHEIVKLLDAK-------GADVNARSWGSSHHH  112 (115)
T ss_dssp             CTTHHHHTTTCHHHHHHHHTT-------SSSHHHHSCCCC---
T ss_pred             CHHHHHHHCCCHHHHHHHHHc-------CCCCCcCCccccccc
Confidence            999999999999999999998       788999999998874

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.80  E-value=1.8e-19  Score=171.68  Aligned_cols=126  Identities=13%  Similarity=0.102  Sum_probs=113.2

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhh-hhccCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDK-MTRQNKAGNTILHETATS---NHALPVADKVLRKAPGLLGMRNNNGETA  104 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~~d~~G~tp  104 (466)
                      .++||.|+..|+.+.++.+++.+.+..... ++..|..|.||||+|+..   |+. +++++|+++ +++++.+|.+|+||
T Consensus       131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~-~~v~~Ll~~-ga~in~~d~~g~Tp  208 (278)
T 1dcq_A          131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL-HIVDFLVQN-SGNLDKQTGKGSTA  208 (278)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTH-HHHHHHHHH-CSCTTCCCTTCCCH
T ss_pred             hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchH-HHHHHHHHC-CCCccccCCCCCCH
Confidence            478999999999999999999766532222 566789999999999999   775 999999999 78899999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH
Q 037168          105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV  166 (466)
Q Consensus       105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~  166 (466)
                      ||+|+..|+.+++++|++.       |++++.+|.+|+||||   .|+..|+.++++.|++.
T Consensus       209 Lh~A~~~g~~~~v~~Ll~~-------gad~~~~d~~g~tpL~---~A~~~~~~~~v~~Ll~~  260 (278)
T 1dcq_A          209 LHYCCLTDNAECLKLLLRG-------KASIEIANESGETPLD---IAKRLKHEHCEELLTQA  260 (278)
T ss_dssp             HHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHc-------CCCCCCccCCCCCHHH---HHHHcCCHHHHHHHHHc
Confidence            9999999999999999998       7789999999999999   77789999999999984

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.72  E-value=1e-17  Score=136.14  Aligned_cols=94  Identities=21%  Similarity=0.181  Sum_probs=83.3

Q ss_pred             cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC
Q 037168           20 ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNN   99 (466)
Q Consensus        20 ~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~   99 (466)
                      .....|.+|.||||+|+..|+.++++.|++     .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|.
T Consensus        16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~i~~~d~~g~tpLh~A~~~~~~-~~v~~Ll~~-ga~~~~~d~   88 (110)
T 2zgd_A           16 RGSHMGSDLGKKLLEAARAGQDDEVRILMA-----NGADVAAKDKNGSTPLHLAARNGHL-EVVKLLLEA-GADVXAQDK   88 (110)
T ss_dssp             ------CCHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCT
T ss_pred             cccccCCccchHHHHHHHcCCHHHHHHHHH-----cCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCcccccc
Confidence            356678999999999999999999999999     5567889999999999999999996 999999998 788999999


Q ss_pred             CCChHHHHHHHcCCHHHHHHH
Q 037168          100 NGETALLRAARYGKVDIFNFL  120 (466)
Q Consensus       100 ~G~tpLh~Aa~~g~~~~v~~L  120 (466)
                      .|+||||+|+..|+.+++++|
T Consensus        89 ~g~tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           89 FGKTAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             TSCCHHHHHHHHTCHHHHHHH
T ss_pred             CCCcHHHHHHHcCCHHHHHHh
Confidence            999999999999999999987

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.68  E-value=6.6e-17  Score=131.32  Aligned_cols=92  Identities=23%  Similarity=0.261  Sum_probs=46.3

Q ss_pred             cCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc
Q 037168           95 GMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI  174 (466)
Q Consensus        95 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~  174 (466)
                      ...|.+|.||||+|+..|+.+++++|++.       +.+++.+|..|+||||   .|+..|+.++++.|++ .+.+++.+
T Consensus        18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~i~~~d~~g~tpLh---~A~~~~~~~~v~~Ll~-~ga~~~~~   86 (110)
T 2zgd_A           18 SHMGSDLGKKLLEAARAGQDDEVRILMAN-------GADVAAKDKNGSTPLH---LAARNGHLEVVKLLLE-AGADVXAQ   86 (110)
T ss_dssp             ----CCHHHHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCC
T ss_pred             cccCCccchHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCcccc
Confidence            34445555555555555555555555554       3344445555555555   3444555555555554 45555555


Q ss_pred             ccCCChHHHHHHHcCChhHHHHH
Q 037168          175 DDEGRNILHVAIKYRQLEIFERV  197 (466)
Q Consensus       175 d~~G~t~Lh~A~~~~~~~iv~~L  197 (466)
                      |..|+||||+|+.+|+.+++++|
T Consensus        87 d~~g~tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           87 DKFGKTAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             ccCCCcHHHHHHHcCCHHHHHHh
Confidence            55555555555555555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	466
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-09
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-04
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-04
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	0.002
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-07
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-05
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.004
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-04
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.002
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-04

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 2e-09
 Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 35/215 (16%)

Query: 30  TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRK 89
           T LH+A++     +V  LL              N    T LH  A + H      K L +
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGAS-----PNVSNVKVETPLHMAARAGHTEVA--KYLLQ 54

Query: 90  APGLLGMRNNNGETALLRAARYGKVDIFNFLAGKIS----------------------GY 127
               +  +  + +T L  AAR G  ++   L    +                        
Sbjct: 55  NKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 114

Query: 128 DHATRLPFLHRNDKTNVLHIAI-LSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAI 186
             A       +   T      + ++  +G + + + +L             G   LHVA+
Sbjct: 115 VLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAV 173

Query: 187 KYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHM 221
            +  L+I    V++ +P         +NG T  H+
Sbjct: 174 HHNNLDI----VKLLLPRGGSPHSPAWNGYTPLHI 204

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 3e-05
 Identities = 43/233 (18%), Positives = 75/233 (32%), Gaps = 31/233 (13%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLA 121
             K G T LH  A          ++L +          NG T L  A  +  +DI   L 
Sbjct: 128 MTKKGFTPLHVAAKYGKVRVA--ELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 185

Query: 122 GKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNI 181
            +  G       P     +    LHIA        +E+ + +L     A      +G   
Sbjct: 186 PR--GGS-----PHSPAWNGYTPLHIAA---KQNQVEVARSLLQYGGSANAE-SVQGVTP 234

Query: 182 LHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE--------- 232
           LH+A +    E+    V + +  +      + +G T  H+   +    VA+         
Sbjct: 235 LHLAAQEGHAEM----VALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290

Query: 233 ----KMEGPALLLQDELLWYERVK-SVTMPHFLNHRNNMGFIPEELFAIANNE 280
               +M    L +       + VK  +     +N +  +G+ P    A   + 
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 343

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 1e-04
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 27  HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV 86
              T LH+A++     LV     +   Q    +  + K G + LH+ A   H   V   +
Sbjct: 296 MGYTPLHVASHYGNIKLV-----KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIV--TL 348

Query: 87  LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           L K        +++G T L  A R G + + + L
Sbjct: 349 LLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 3e-04
 Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 22/201 (10%)

Query: 32  LHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP 91
           LH+A +    D+V  LL                 G T LH  A  N       + L +  
Sbjct: 169 LHVAVHHNNLDIVKLLLPRGGS-----PHSPAWNGYTPLHIAAKQNQVEV--ARSLLQYG 221

Query: 92  GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILS 151
           G     +  G T L  AA+ G  ++       ++          L        LH+    
Sbjct: 222 GSANAESVQGVTPLHLAAQEGHAEM-------VALLLSKQANGNLGNKSGLTPLHLVA-- 272

Query: 152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKI 211
              G + +   ++  +   V+     G   LHVA  Y  +++    V+  +  +  V   
Sbjct: 273 -QEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIKL----VKFLLQHQADVNAK 326

Query: 212 DYNGNTIFHMAGIKRKDYVAE 232
              G +  H A  +    +  
Sbjct: 327 TKLGYSPLHQAAQQGHTDIVT 347

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 0.002
 Identities = 34/177 (19%), Positives = 57/177 (32%), Gaps = 28/177 (15%)

Query: 68  TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK---- 123
           T LH  +   H   V  K L +      + N   ET L  AAR G  ++  +L       
Sbjct: 2   TPLHVASFMGHLPIV--KNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59

Query: 124 ---------------ISGYDHATRLPFLHRND---KTNVLHIAILSLHFGCIEIVKDILS 165
                            G+ +  +L   +  +    T   H  +              L 
Sbjct: 60  NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 119

Query: 166 VYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
               +   +  +G   LHVA KY ++ + E +++ +            NG T  H+A
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH----PNAAGKNGLTPLHVA 172

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 1e-07
 Identities = 45/243 (18%), Positives = 77/243 (31%), Gaps = 41/243 (16%)

Query: 26  IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV--- 82
           + D+ +L  A   +  DLV +LL+       +   ++ + G T LH     +    V   
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLE----GGANVNFQEEEGGWTPLHNAVQMSREDIVELL 58

Query: 83  ----------------------------ADKVLRKAPGLLGMRNNNGETALLRAARYGKV 114
                                         K+       +   +  G TA + AA YGKV
Sbjct: 59  LRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 118

Query: 115 DIFNFLAGKISGY---DHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAV 171
               FL  + +               R      L  A      G +E++K +L      V
Sbjct: 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA---EKGHVEVLKILLDEMGADV 175

Query: 172 EHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA 231
              D+ GRN L  A+        E +  + +     V      G T   +A  K+   + 
Sbjct: 176 NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235

Query: 232 EKM 234
           +++
Sbjct: 236 QRL 238

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 1e-06
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 9/137 (6%)

Query: 96  MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG 155
                G TAL+ AA  G V++   L       D          N   N L  A+LS    
Sbjct: 143 RLRKGGATALMDAAEKGHVEVLKIL------LDEMGADVNACDNMGRNALIHALLSSDDS 196

Query: 156 CIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG 215
            +E +  +L  +   V    + G+  L +A++ + L + +R+++ E      +   D +G
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE---HIEINDTDSDG 253

Query: 216 NTIFHMAGIKRKDYVAE 232
            T   +A   +   +AE
Sbjct: 254 KTALLLAVELKLKKIAE 270

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 5e-05
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 62  QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           + + G T L       H L +  ++L +    +   +++G+TALL A       I   L
Sbjct: 215 RGERGKTPLILAVEKKH-LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 5e-05
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 11/197 (5%)

Query: 33  HMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPG 92
               +     L+ ++ D  P+  L+     ++ GNT LH   +  +   V  K L K   
Sbjct: 74  QQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELV--KHLVKHGS 131

Query: 93  LLGMRNNNGETALLRAARYGK-------VDIFNFLAGKISGYDHATRLPFLHRNDKTNVL 145
                +N GE+ L++A +            + ++L   +   D   R   LH    T+ +
Sbjct: 132 NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI-LHHIIITSGM 190

Query: 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLR 205
                +  +    ++  I+    + ++   +E  +  +     R+  I E +    I + 
Sbjct: 191 TGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI-IA 249

Query: 206 RLVRKIDYNGNTIFHMA 222
            ++   D NG+T  ++A
Sbjct: 250 NMLNAQDSNGDTCLNIA 266

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (98), Expect = 7e-05
 Identities = 30/242 (12%), Positives = 71/242 (29%), Gaps = 19/242 (7%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           +  L    + +  ++   L ++  ++       +  + N      +  +    V D    
Sbjct: 40  EAFLQRLLFPEIQEMPTSLNNDSSNR-----NSEGGSSNQQQQHVSFDSLLQEVNDAFPN 94

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIA 148
               L    + +G T L        +++   L     G +          N   + L  A
Sbjct: 95  TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH--GSN-----RLYGDNMGESCLVKA 147

Query: 149 ILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLV 208
           + S++       + +L      +   D   R ILH  I    +       +  +    + 
Sbjct: 148 VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLD-ILMG 206

Query: 209 RKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGF 268
             +      I      K      +  E    +L++  L +       + + LN +++ G 
Sbjct: 207 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI------IANMLNAQDSNGD 260

Query: 269 IP 270
             
Sbjct: 261 TC 262

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 31/228 (13%), Positives = 67/228 (29%), Gaps = 21/228 (9%)

Query: 6   EQKVIELCRKVPDHALYVFTIHDD---TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQ 62
           +  + E+    P+  L +    D+   T LH  T     +LV  L+    +         
Sbjct: 82  DSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-----RLYG 136

Query: 63  NKAGNTILH--ETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFL 120
           +  G + L     + +N+     + +L      L + ++   T L        +   +  
Sbjct: 137 DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAA 196

Query: 121 AGKISGY------DHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI 174
           A                R      N+K +  +          +E + D+  +    +   
Sbjct: 197 AKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL-DLKWIIANMLNAQ 255

Query: 175 DDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
           D  G   L++A +   + I    V   +         + +G       
Sbjct: 256 DSNGDTCLNIAARLGNISI----VDALLDYGADPFIANKSGLRPVDFG 299

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (95), Expect = 1e-04
 Identities = 31/170 (18%), Positives = 49/170 (28%), Gaps = 22/170 (12%)

Query: 63  NKAGNTILHETATSNHALPVADKVLRKA--PGLLGMRNNNGETALLRAARYGKVDIFNFL 120
            + G+T LH      H  P  D +L  +     L ++N+ G+TAL  AA  G+       
Sbjct: 6   TEDGDTALHLAVIHQH-EPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK- 63

Query: 121 AGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE--- 177
                    A     +        LH+A              +L   P       D    
Sbjct: 64  ------LYAAGAGVLVAERGGHTALHLAC---RVRAHTCACVLLQPRPSHPRDASDTYLT 114

Query: 178 ------GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHM 221
                        A    Q          +   R  +   +Y+G+T  H+
Sbjct: 115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV 164

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (89), Expect = 7e-04
 Identities = 33/175 (18%), Positives = 51/175 (29%), Gaps = 7/175 (4%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           DT LH+A   +    +  LL        + +  QN  G T LH  A    A  V      
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAG--HEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFL---AGKISGYDHATRLPFLHRNDKTNVL 145
            A  L+  R  +    L  A R         L             T L            
Sbjct: 68  GAGVLVAERGGHTALHL--ACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125

Query: 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQM 200
             A +          +     +   +E  + +G   LHVA+ ++  E+   +   
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 26/262 (9%), Positives = 68/262 (25%), Gaps = 21/262 (8%)

Query: 21  LYVFTIHDDTVLHMATYTKKSDLVIKLL------DELPDQSLDKMTRQNKAGNTILHETA 74
           L   +  +   + +        +   L       +    Q      ++      I    A
Sbjct: 39  LMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAA 98

Query: 75  TSNHALPV-ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRL 133
            +  +  +    +L  +  ++ +       A   AA  G + + N L         A   
Sbjct: 99  ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM-- 156

Query: 134 PFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI--DDEGRNILHVAIKYRQL 191
               + +  +   +A      G + ++  +  + P     +   +        A+     
Sbjct: 157 ---IQAENYHAFRLAA---ENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 210

Query: 192 EIFERVVQMEIPLRRLVRKIDYNGNT----IFHMAGIKRKDYVAEKMEGPALLLQDELLW 247
            +   ++   + L          G             + K+            + D +  
Sbjct: 211 NVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTK 270

Query: 248 YERVKSVTMPHFLNHRNNMGFI 269
            E ++   M   L  RN+   +
Sbjct: 271 SECLQGFYMLRNLIRRNDEVLL 292

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 21/202 (10%), Positives = 54/202 (26%), Gaps = 28/202 (13%)

Query: 9   VIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNT 68
           +  LC   P   + +    +     +A       ++ +L +  P    +           
Sbjct: 142 LNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPT---EATAMIQAENYY 198

Query: 69  ILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGY- 127
                A       V +         L         A +    YG+  +  F+A  ++   
Sbjct: 199 AFRWAAVGRGHHNVIN--------FLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLK 250

Query: 128 DHATRLPFLHRNDKTNV------------LHIAILSLHFGCIEIVKDILSV----YPQAV 171
           +        + +   ++            L   I       ++ ++ +LS+         
Sbjct: 251 EMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPT 310

Query: 172 EHIDDEGRNILHVAIKYRQLEI 193
             I  +   +L +A++      
Sbjct: 311 ATIPGDANELLRLALRLGNQGA 332

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 28/157 (17%), Positives = 43/157 (27%), Gaps = 20/157 (12%)

Query: 67  NTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISG 126
           N ++   A S   L    + +     L    + +  TAL  A   G  +I  FL      
Sbjct: 4   NLMVCNLAYSGK-LEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 62

Query: 127 YD--HATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV 184
            +         LH         I    L  G               V  ++  G   LH 
Sbjct: 63  VNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQ-------------VNAVNQNGCTPLHY 109

Query: 185 AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHM 221
           A    + EI   +++            D+   T  H 
Sbjct: 110 AASKNRHEIAVMLLEGGAN----PDAKDHYEATAMHR 142

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.004
 Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 14/141 (9%)

Query: 59  MTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFN 118
           +   N+ G T LH  A+ N        +L +       +++   TA+ RAA  G + + +
Sbjct: 96  VNAVNQNGCTPLHYAASKNRHEIA--VMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIH 153

Query: 119 FLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG 178
            L        +      +   +    LH+A        +E  K ++S    ++   + E 
Sbjct: 154 IL-------LYYKASTNIQDTEGNTPLHLAC---DEERVEEAKLLVS-QGASIYIENKEE 202

Query: 179 RNILHVAIKYRQLEIFERVVQ 199
           +  L VA K     I +R+V+
Sbjct: 203 KTPLQVA-KGGLGLILKRMVE 222

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (88), Expect = 7e-04
 Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 11/204 (5%)

Query: 29  DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88
           D+ LH+A   ++  L ++++ ++       +  QN    T LH       A+      + 
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAF-LNFQNNLQQTPLH------LAVITNQPEIA 55

Query: 89  KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIA 148
           +A    G      +                   G ++       L  + +    N     
Sbjct: 56  EALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 115

Query: 149 ILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLV 208
            L+   G + IV+ ++S+           GR  LH+A+  +  ++   +++        V
Sbjct: 116 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD----V 171

Query: 209 RKIDYNGNTIFHMAGIKRKDYVAE 232
            ++ Y G + + +   +    + +
Sbjct: 172 NRVTYQGYSPYQLTWGRPSTRIQQ 195

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 9/46 (19%), Positives = 20/46 (43%)

Query: 177 EGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222
           +G + LH+AI + +  +   V++        +   +    T  H+A
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.9 bits (89), Expect = 7e-04
 Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 2/64 (3%)

Query: 57  DKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDI 116
               +Q++ G T +   A       V    L +    +   +    TA   A      +I
Sbjct: 212 SNKDKQDEDGKTPIMLAAQEGRIEVV--MYLIQQGASVEAVDATDHTARQLAQANNHHNI 269

Query: 117 FNFL 120
            +  
Sbjct: 270 VDIF 273

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	466
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.98
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.98
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.97
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.97
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.96
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.96
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.95
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.95
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.95
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.93
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.93
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.93
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.93
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.93
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.9
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.89
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.88
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.88
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.88
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.88
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.82
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.82

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-36  Score=274.36  Aligned_cols=208  Identities=19%  Similarity=0.184  Sum_probs=190.6

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      +|+.+.|.+++.+. +..++..|.+|+||||+||..|+.++++++++..     ......+..+.++++.|+..++. ++
T Consensus        13 ~G~~~~v~~~l~~~-~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~i   85 (223)
T d1uoha_          13 SGKLEELKESILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG-----VPVNDKDDAGWSPLHIAASAGRD-EI   85 (223)
T ss_dssp             TTCHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-----CCSCCCCTTCCCHHHHHHHHTCH-HH
T ss_pred             hCCHHHHHHHHHhC-CCcCcCcCCCCCCHHHHHHHhhhhcccccccccc-----ccccccccccccccccccccccc-ch
Confidence            79999999999998 4678999999999999999999999999999954     44566778899999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD  162 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~  162 (466)
                      ++.|+++ +.+++.+|.+|+||||+|+..|+.+++++|+++       +.+++.+|.+|.||||   .++..++.++++.
T Consensus        86 ~~~Ll~~-~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~-------g~d~~~~~~~~~t~L~---~a~~~~~~~~~~~  154 (223)
T d1uoha_          86 VKALLGK-GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-------GANPDAKDHYEATAMH---RAAAKGNLKMIHI  154 (223)
T ss_dssp             HHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHH
T ss_pred             hHHHhcc-CceeEeeCCCCCchhhHHHHcCCHHHHHHHHHC-------CCCCCCcCCCCCccch---hhhhcCCcchhhh
Confidence            9999998 578999999999999999999999999999998       6788899999999999   7789999999999


Q ss_pred             HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+ .++.+++++|
T Consensus       155 L~~-~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad----~~~~d~~g~tpl~~A~-~~~~~i~~~L  220 (223)
T d1uoha_         155 LLY-YKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS----IYIENKEEKTPLQVAK-GGLGLILKRM  220 (223)
T ss_dssp             HHH-TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHCC-TTHHHHHHHH
T ss_pred             hcc-ccceeeeccCCCCceeccccccCcHHHHHHHHHCCCC----CCCCCCCCCCHHHHHH-CCCHHHHhcc
Confidence            987 8899999999999999999999999999999999999    9999999999999985 5777776544

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-36  Score=280.52  Aligned_cols=202  Identities=20%  Similarity=0.161  Sum_probs=176.7

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCC
Q 037168           22 YVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNG  101 (466)
Q Consensus        22 ~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G  101 (466)
                      ...|++|+||||+||+.|+.+++++|++.+.+.  ..++.+|..|+||||+|+..|+. ++++.|+++ +++++.+|.+|
T Consensus         3 ~~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~--~~i~~~~~~g~TpL~~A~~~g~~-~iv~~Ll~~-ga~i~~~d~~g   78 (255)
T d1oy3d_           3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH--EYLDLQNDLGQTALHLAAILGEA-STVEKLYAA-GAGVLVAERGG   78 (255)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS--GGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSSCCCTTS
T ss_pred             ccCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCc--ccccCcCCCCCCccchHHhhccc-ccccccccc-ccccccccccc
Confidence            457899999999999999999999999965432  34788999999999999999996 999999988 78899999999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCC----------------------------------------CCCCcccccccCCC
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGY----------------------------------------DHATRLPFLHRNDK  141 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~----------------------------------------~~~~~~~~~~d~~g  141 (466)
                      .||||+|+..|+.+++++|++.....                                        ...+...+.+|.+|
T Consensus        79 ~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g  158 (255)
T d1oy3d_          79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG  158 (255)
T ss_dssp             CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred             chhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccC
Confidence            99999999999999999998754311                                        01134556788999


Q ss_pred             CChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhh
Q 037168          142 TNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHM  221 (466)
Q Consensus       142 ~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHl  221 (466)
                      +||||   .|+..|+.++++.|++......+..+..|+||||+|++.|+.+++++|+++|++    ++.+|.+|+||||+
T Consensus       159 ~TpLh---~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gad----in~~d~~g~t~L~~  231 (255)
T d1oy3d_         159 HTPLH---VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD----PTARMYGGRTPLGS  231 (255)
T ss_dssp             CCHHH---HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHH
T ss_pred             ccccc---ccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCC----CCCCCCCCCCHHHH
Confidence            99999   677899999999999955544455678899999999999999999999999998    99999999999999


Q ss_pred             hhccCcchhhhcc
Q 037168          222 AGIKRKDYVAEKM  234 (466)
Q Consensus       222 Aa~~~~~~~~~~l  234 (466)
                      |++.++.+++++|
T Consensus       232 A~~~~~~~i~~~L  244 (255)
T d1oy3d_         232 ALLRPNPILARLL  244 (255)
T ss_dssp             HHTSSCHHHHHHH
T ss_pred             HHHCCCHHHHHHH
Confidence            9999999999777

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-34  Score=264.78  Aligned_cols=215  Identities=17%  Similarity=0.142  Sum_probs=193.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR  107 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~  107 (466)
                      +++.|+.+|+.|+.+.|+.+++.    .+..++.+|.+|+||||+||..|+. ++++++++. +......+..+.++++.
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~----~~~~~~~~D~~G~TpLh~Aa~~g~~-e~~~~l~~~-~~~~~~~~~~~~~~~~~   76 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILA----DKSLATRTDQDSRTALHWACSAGHT-EIVEFLLQL-GVPVNDKDDAGWSPLHI   76 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHH----CGGGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHH-TCCSCCCCTTCCCHHHH
T ss_pred             CHHHHHHHHHhCCHHHHHHHHHh----CCCcCcCcCCCCCCHHHHHHHhhhh-ccccccccc-ccccccccccccccccc
Confidence            46899999999999999999886    5668999999999999999999996 999999998 56677788899999999


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      ++..|+.+++++|+++       +.+++.+|.+|+||||   .|+..|+.++++.|++ .+.+++.+|..|.||||+|+.
T Consensus        77 ~~~~~~~~i~~~Ll~~-------~~d~~~~d~~g~tpL~---~A~~~~~~e~~~~Ll~-~g~d~~~~~~~~~t~L~~a~~  145 (223)
T d1uoha_          77 AASAGRDEIVKALLGK-------GAQVNAVNQNGCTPLH---YAASKNRHEIAVMLLE-GGANPDAKDHYEATAMHRAAA  145 (223)
T ss_dssp             HHHHTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred             cccccccchhHHHhcc-------CceeEeeCCCCCchhh---HHHHcCCHHHHHHHHH-CCCCCCCcCCCCCccchhhhh
Confidence            9999999999999998       6678899999999999   6678899999999998 889999999999999999999


Q ss_pred             cCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCC
Q 037168          188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMG  267 (466)
Q Consensus       188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g  267 (466)
                      +++.+++++|.+.+.+    ++.+|.+|+||||+|++.++.++++.|                   +..+.+++.+|++|
T Consensus       146 ~~~~~~~~~L~~~~~~----i~~~d~~g~TpL~~Aa~~g~~~~v~~L-------------------L~~Gad~~~~d~~g  202 (223)
T d1uoha_         146 KGNLKMIHILLYYKAS----TNIQDTEGNTPLHLACDEERVEEAKLL-------------------VSQGASIYIENKEE  202 (223)
T ss_dssp             TTCHHHHHHHHHTTCC----SCCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCCTTS
T ss_pred             cCCcchhhhhccccce----eeeccCCCCceeccccccCcHHHHHHH-------------------HHCCCCCCCCCCCC
Confidence            9999999999999988    999999999999999999999988766                   23456679999999


Q ss_pred             CChHHHHHHHhHHHH
Q 037168          268 FIPEELFAIANNELR  282 (466)
Q Consensus       268 ~Tp~~l~~~~~~~~~  282 (466)
                      +||+++|...+.+..
T Consensus       203 ~tpl~~A~~~~~~i~  217 (223)
T d1uoha_         203 KTPLQVAKGGLGLIL  217 (223)
T ss_dssp             CCHHHHCCTTHHHHH
T ss_pred             CCHHHHHHCCCHHHH
Confidence            999999966555543

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-33  Score=275.60  Aligned_cols=240  Identities=19%  Similarity=0.186  Sum_probs=193.7

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      .|+.+.|..++.++  ++++..|.+|+||||+||+.|+.+++++|++     +|++++.+|.+|+||||+|+..|+. ++
T Consensus        10 ~g~~~~v~~Ll~~g--~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~-----~gadi~~~~~~g~t~L~~A~~~g~~-~~   81 (408)
T d1n11a_          10 MGHLPIVKNLLQRG--ASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-----NKAKVNAKAKDDQTPLHCAARIGHT-NM   81 (408)
T ss_dssp             HTCHHHHHHHHHTT--CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH-----HTCCSSCCCTTSCCHHHHHHHHTCH-HH
T ss_pred             CcCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----CcCCCCCCCCCCCCHHHHHHHcCCH-HH
Confidence            58888888888775  7789999999999999999999999999999     4566888999999999999988774 55


Q ss_pred             HHH------------------------------------------------------------------HHHhCCCcccC
Q 037168           83 ADK------------------------------------------------------------------VLRKAPGLLGM   96 (466)
Q Consensus        83 v~~------------------------------------------------------------------Ll~~~~~~~~~   96 (466)
                      ++.                                                                  |++. +.+++.
T Consensus        82 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~-~~~~~~  160 (408)
T d1n11a_          82 VKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER-DAHPNA  160 (408)
T ss_dssp             HHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC
T ss_pred             HHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHc-CCCCCc
Confidence            444                                                                  4433 556778


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHhccCCCCC-----------------------------------------------
Q 037168           97 RNNNGETALLRAARYGKVDIFNFLAGKISGYDH-----------------------------------------------  129 (466)
Q Consensus        97 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~-----------------------------------------------  129 (466)
                      .+.+|.+|||+|+..|+.+++++|++++...+.                                               
T Consensus       161 ~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~  240 (408)
T d1n11a_         161 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ  240 (408)
T ss_dssp             CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhccccccccCCCCCCHHHHHHH
Confidence            888999999999999999999999987542110                                               


Q ss_pred             ------------CCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHH
Q 037168          130 ------------ATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERV  197 (466)
Q Consensus       130 ------------~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~L  197 (466)
                                  .+...+..|..|.||+|   .++..++.++++.|++ .|.+++..+..+.||||.|+..++.++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~---~a~~~~~~~i~~~Ll~-~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~l  316 (408)
T d1n11a_         241 EGHAEMVALLLSKQANGNLGNKSGLTPLH---LVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIKLVKFL  316 (408)
T ss_dssp             TTCHHHHHHHHTTTCCTTCCCTTCCCHHH---HHHHHTCHHHHHHHHH-HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHH
T ss_pred             hCcHhHhhhhhccccccccccCCCCChhh---hhhhcCcHHHHHHHHH-CCCccccccccccccchhhcccCcceeeeee
Confidence                        01122234455566666   4556678888888887 6778888888888888888888888888888


Q ss_pred             HhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHH
Q 037168          198 VQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA  277 (466)
Q Consensus       198 l~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~  277 (466)
                      ++.|++    +|.+|.+|+||||+|++.|+.+++++|                   +..+.+++.+|++|+||+++|.+.
T Consensus       317 l~~g~~----in~~d~~G~T~Lh~A~~~g~~~iv~~L-------------------l~~GAd~n~~d~~G~t~L~~A~~~  373 (408)
T d1n11a_         317 LQHQAD----VNAKTKLGYSPLHQAAQQGHTDIVTLL-------------------LKNGASPNEVSSDGTTPLAIAKRL  373 (408)
T ss_dssp             HHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred             cccccc----ccccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCCHHHHHHHc
Confidence            888887    899999999999999999999998777                   345667899999999999999876


Q ss_pred             h
Q 037168          278 N  278 (466)
Q Consensus       278 ~  278 (466)
                      .
T Consensus       374 ~  374 (408)
T d1n11a_         374 G  374 (408)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.4e-33  Score=262.05  Aligned_cols=205  Identities=14%  Similarity=0.175  Sum_probs=175.4

Q ss_pred             ccccC-CCCCcHHHHHHHcCCHHHHHHHHHhCCC---CchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccC
Q 037168           21 LYVFT-IHDDTVLHMATYTKKSDLVIKLLDELPD---QSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGM   96 (466)
Q Consensus        21 ~~~~~-~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~   96 (466)
                      ++..+ .+|+||||+||..|+.++|+.|+.....   ..|+++|.+|.+|+||||+|+..|+. +++++|+++ |++++.
T Consensus        25 ~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~-~iv~~Ll~~-Gad~n~  102 (277)
T d2fo1e1          25 VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR-RLVAYLMKA-GADPTI  102 (277)
T ss_dssp             TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSCC
T ss_pred             CCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeeccccccccc-ccccccccc-cccccc
Confidence            33344 4699999999999999999988764211   03578999999999999999999996 999999998 788999


Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHhccC---CC-------------------------------------CCCCccccc
Q 037168           97 RNNNGETALLRAARYGKVDIFNFLAGKIS---GY-------------------------------------DHATRLPFL  136 (466)
Q Consensus        97 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~---~~-------------------------------------~~~~~~~~~  136 (466)
                      +|.+|.||||+|+..++.++++.+.....   ..                                     .......+.
T Consensus       103 ~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (277)
T d2fo1e1         103 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS  182 (277)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred             ccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccc
Confidence            99999999999999999999998876432   00                                     001123344


Q ss_pred             ccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC
Q 037168          137 HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN  216 (466)
Q Consensus       137 ~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~  216 (466)
                      .+.+|.||||   .++..++.++++.++...+.+.+.+|..|+||||+|+++|+.+++++|+++|++    +|.+|.+|+
T Consensus       183 ~~~~g~t~L~---~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gad----in~~d~~G~  255 (277)
T d2fo1e1         183 EKYKGRTALH---YAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS----VEAVDATDH  255 (277)
T ss_dssp             SSCCCCCTHH---HHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SSCCCSSSC
T ss_pred             cccCCCCccc---cccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC----CCCcCCCCC
Confidence            6678999999   777899999999988889999999999999999999999999999999999999    999999999


Q ss_pred             CchhhhhccCcchhhhcc
Q 037168          217 TIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       217 TpLHlAa~~~~~~~~~~l  234 (466)
                      ||||+|++.|+.+++++|
T Consensus       256 T~L~~A~~~~~~~iv~lL  273 (277)
T d2fo1e1         256 TARQLAQANNHHNIVDIF  273 (277)
T ss_dssp             CHHHHHHHTTCHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHH
Confidence            999999999999998766

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=3.8e-32  Score=249.21  Aligned_cols=212  Identities=17%  Similarity=0.119  Sum_probs=169.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcc---cCcCCCCChHH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLL---GMRNNNGETAL  105 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~---~~~d~~G~tpL  105 (466)
                      +||||+||+.|+.+.++.|++.    .+..++.+|.+|+||||+|+..|+. +++++|+++ ++++   +..|..|.+|+
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~----~~~~~~~~d~~G~TpL~~A~~~g~~-~iv~~Ll~~-ga~~~~~~~~~~~~~~~~   74 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHS----KPSLLLQKDQDGRIPLHWSVSFQAH-EITSFLLSK-MENVNLDDYPDDSGWTPF   74 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHH----CGGGTTCCCTTSCCHHHHHHHTTCH-HHHHHHHTT-CTTCCGGGCCCTTSCCHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHc----CCCcccccCCCCCCHHHHHHHcCCc-cccchhhhh-hccccccccccccccccc
Confidence            4899999999999999988886    3457888889999999999998886 899988887 4444   35677888999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA  185 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A  185 (466)
                      |+++..+..++++.++....     .......+..+.||++   .++..++.++++.|++ .+...+.+|..|+||||+|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~l~~-~~~~~~~~~~~g~t~l~~a  145 (229)
T d1ixva_          75 HIACSVGNLEVVKSLYDRPL-----KPDLNKITNQGVTCLH---LAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRA  145 (229)
T ss_dssp             HHHHHHTCHHHHHHHHSSSS-----CCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHH
T ss_pred             cccccccccccccccccccc-----cccccccccccccccc---cccccchhhhhhhhhh-hcccccccCCCCCCccchh
Confidence            99999999998888887644     2334456677888999   6667888999988887 7788888888999999999


Q ss_pred             HHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccC
Q 037168          186 IKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNN  265 (466)
Q Consensus       186 ~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~  265 (466)
                      +.+|+.+++++|++.+.+   .+|.+|.+|+||||+|++.++.++++.|..                  ..+.+++.+|+
T Consensus       146 ~~~~~~~~~~~Ll~~~~~---~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~------------------~~gad~~~~d~  204 (229)
T d1ixva_         146 ASVGSLKLIELLCGLGKS---AVNWQDKQGWTPLFHALAEGHGDAAVLLVE------------------KYGAEYDLVDN  204 (229)
T ss_dssp             HHHTCHHHHHHHHTTTCC---CSCCCCTTSCCHHHHHHHTTCHHHHHHHHH------------------HHCCCSCCCCT
T ss_pred             hhcccccccccccccccc---cccccccccCCchhhhcccccHHHHHHHHH------------------hcCCCCCCcCC
Confidence            999999999999887632   278888999999999998888888765510                  12456788888


Q ss_pred             CCCChHHHHHH
Q 037168          266 MGFIPEELFAI  276 (466)
Q Consensus       266 ~g~Tp~~l~~~  276 (466)
                      +|+||++++.+
T Consensus       205 ~g~t~l~~A~~  215 (229)
T d1ixva_         205 KGAKAEDVALN  215 (229)
T ss_dssp             TSCCTGGGCSC
T ss_pred             CCCCHHHHHhh
Confidence            99999998763

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.98  E-value=1.5e-32  Score=261.31  Aligned_cols=237  Identities=17%  Similarity=0.162  Sum_probs=197.9

Q ss_pred             hHHHHHHHHhCCCcccc-------ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC
Q 037168            6 EQKVIELCRKVPDHALY-------VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH   78 (466)
Q Consensus         6 ~~~v~~ll~~~~~~~~~-------~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~   78 (466)
                      .+.+.+++.........       ..+.++.|+||.||+.|+.++|++||+     .|++++.+|.+|.||||+|+..|+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~G~~~~v~~Ll~-----~Gadvn~~d~~G~T~L~~A~~~g~   85 (291)
T d1s70b_          11 NEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLE-----RGADINYANVDGLTALHQACIDDN   85 (291)
T ss_dssp             HHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHH-----HCCCTTCBCTTCCBHHHHHHHTTC
T ss_pred             HHHHHHHHhCcccccCchhhccccccCCCCchHHHHHHHcCCHHHHHHHHH-----CCCCCCccCCCCCcHHHHHHhcCC
Confidence            45667776665332211       123346799999999999999999999     556789999999999999999999


Q ss_pred             cHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHH
Q 037168           79 ALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIE  158 (466)
Q Consensus        79 ~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~  158 (466)
                      . +++++|+++ +......+..+.||||.|+..++.++++.|++.       +...+..|.+|.+|++   .|...++.+
T Consensus        86 ~-eiv~~Ll~~-~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~---~a~~~~~~~  153 (291)
T d1s70b_          86 V-DMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQ-------GAHVGAVNSEGDTPLD---IAEEEAMEE  153 (291)
T ss_dssp             H-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HCCSHHHHH
T ss_pred             c-eeeeeeccc-ccccccccccccccccccccccccchhhccccc-------CcccccccccCccccc---cccccccch
Confidence            6 999999998 566888899999999999999999999999998       5566778899999999   777888888


Q ss_pred             HHHHHHHHCCC--------------------------cccccccCCChHHHHHHHcCChhHHHHHHhcCccccccccccc
Q 037168          159 IVKDILSVYPQ--------------------------AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKID  212 (466)
Q Consensus       159 ~v~~Ll~~~~~--------------------------~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d  212 (466)
                      .++.++...+.                          .....+..|.||||.|+..|+.++++.|++.|++    +|.+|
T Consensus       154 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d----in~~~  229 (291)
T d1s70b_         154 LLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD----VNIKD  229 (291)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC----TTCCC
T ss_pred             hccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceec----ccccc
Confidence            88888764333                          2345678899999999999999999999999998    89999


Q ss_pred             CCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhHHHH
Q 037168          213 YNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNELR  282 (466)
Q Consensus       213 ~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~~~~  282 (466)
                      .+|+||||+|++.|+.+++++|                   +..+.+++.+|++|+||+++|.+...++.
T Consensus       230 ~~g~TpL~~A~~~g~~~iv~lL-------------------l~~Gadv~~~d~~G~TaL~~A~e~~~~~L  280 (291)
T d1s70b_         230 YDGWTPLHAAAHWGKEEACRIL-------------------VENLCDMEAVNKVGQTAFDVADEDILGYL  280 (291)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCTTTSCCSGGGHHH
T ss_pred             cCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999777                   33466789999999999999976433333

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-32  Score=252.30  Aligned_cols=196  Identities=19%  Similarity=0.289  Sum_probs=166.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL  106 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh  106 (466)
                      +|+||||+|+..|+.++++.|++.... .+.+++.+|.+|+||||+|+..|+. +++++|++. +.+++.+|..|.||||
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~-~~~~in~~d~~g~TpLh~A~~~~~~-~iv~~L~~~-g~d~~~~d~~g~t~l~   77 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKG-DLAFLNFQNNLQQTPLHLAVITNQP-EIAEALLGA-GCDPELRDFRGNTPLH   77 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCH-HHHHCCCSC-CCCSCCCCTTCCCHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHh-CCCCcccCCCCCCcccccccccccc-ccccccccc-cccccccccccccccc
Confidence            699999999999998887777765443 5678999999999999999999996 999999987 7789999999999999


Q ss_pred             HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc-ccCCChHHHHH
Q 037168          107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI-DDEGRNILHVA  185 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~-d~~G~t~Lh~A  185 (466)
                      +|+..|+.++++.|++....... .........+|.||||   .++..++.++++.+++ .+..++.. +.+|+||||+|
T Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~t~l~---~a~~~~~~~~~~~l~~-~~~~~~~~~~~~G~T~L~~A  152 (221)
T d1iknd_          78 LACEQGCLASVGVLTQSCTTPHL-HSILKATNYNGHTCLH---LASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHLA  152 (221)
T ss_dssp             HHHHHTCHHHHHHHHHSTTTTSS-SCGGGCCCTTCCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHH
T ss_pred             cccccccccccchhhhhcccccc-cccccccccccchhhh---HHhhcCChhheeeecc-cCcccccccccCCCCccccc
Confidence            99999999999999987543221 2334445667999999   7778999999999998 45555554 46799999999


Q ss_pred             HHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          186 IKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       186 ~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      ++.|+.+++++|+++|+|    ++.+|.+|+||||+|++.++.++++.+
T Consensus       153 ~~~g~~~~v~~Ll~~gad----~~~~~~~G~tpl~~A~~~~~~~~~~~l  197 (221)
T d1iknd_         153 VDLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQL  197 (221)
T ss_dssp             HHTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHH
T ss_pred             cccccHHHHHHHHhcCCc----ccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence            999999999999999998    999999999999999999999888665

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.1e-30  Score=239.30  Aligned_cols=206  Identities=17%  Similarity=0.144  Sum_probs=181.1

Q ss_pred             CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      .+|+.+.+..++...+ ..++.+|.+|+||||+|+..|+.+++++|++.+++.  ...+..|..|.||+|+|+..+.. +
T Consensus         9 ~~g~~~~v~~Ll~~~~-~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~~~~~-~   84 (229)
T d1ixva_           9 MENEFFKVQELLHSKP-SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV--NLDDYPDDSGWTPFHIACSVGNL-E   84 (229)
T ss_dssp             HHTCHHHHHHHHHHCG-GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTC--CGGGCCCTTSCCHHHHHHHHTCH-H
T ss_pred             HcCCHHHHHHHHHcCC-CcccccCCCCCCHHHHHHHcCCccccchhhhhhccc--ccccccccccccccccccccccc-c
Confidence            4688999999998874 678999999999999999999999999999966543  22346788999999999999986 8


Q ss_pred             HHHHHHHhCC-CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHH
Q 037168           82 VADKVLRKAP-GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIV  160 (466)
Q Consensus        82 ~v~~Ll~~~~-~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v  160 (466)
                      +++.++.... ......+..+.||++.++..++.+++++|++.       +...+.+|.+|+||||   .++..|+.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~g~t~l~---~a~~~~~~~~~  154 (229)
T d1ixva_          85 VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-------GASVRIKDKFNQIPLH---RAASVGSLKLI  154 (229)
T ss_dssp             HHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHHTCHHHH
T ss_pred             cccccccccccccccccccccccccccccccchhhhhhhhhhh-------cccccccCCCCCCccc---hhhhccccccc
Confidence            8888877632 34566788999999999999999999999998       5567778999999999   77788999999


Q ss_pred             HHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHh-cCcccccccccccCCCCCchhhhhcc
Q 037168          161 KDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ-MEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       161 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      +.|++..+.+++.+|..|+||||+|+++|+.+++++|++ .|++    ++.+|.+|+||||+|+..
T Consensus       155 ~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad----~~~~d~~g~t~l~~A~~~  216 (229)
T d1ixva_         155 ELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE----YDLVDNKGAKAEDVALNE  216 (229)
T ss_dssp             HHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC----SCCCCTTSCCTGGGCSCH
T ss_pred             ccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCC----CCCcCCCCCCHHHHHhhH
Confidence            999997778999999999999999999999999999996 5888    999999999999999853

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.7e-30  Score=242.16  Aligned_cols=184  Identities=18%  Similarity=0.084  Sum_probs=156.0

Q ss_pred             ccchHHHHHHHHhCCC-ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168            3 KQDEQKVIELCRKVPD-HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP   81 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~-~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~   81 (466)
                      .|+.+.+..++..+.+ ..++..|.+|+||||+||..|+.++++.|++     .+++++.+|.+|.||||+|+..++. +
T Consensus        19 ~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~-----~ga~i~~~d~~g~tpL~~A~~~~~~-~   92 (255)
T d1oy3d_          19 HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-----AGAGVLVAERGGHTALHLACRVRAH-T   92 (255)
T ss_dssp             TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSSCCCTTSCCHHHHHTTTTCH-H
T ss_pred             cCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhccccccccccc-----ccccccccccccchhhhhhhccCch-H
Confidence            4555555555554422 3377889999999999999999999999999     5677899999999999999999996 8


Q ss_pred             HHHHHHHhC----------------------------------------------CCcccCcCCCCChHHHHHHHcCCHH
Q 037168           82 VADKVLRKA----------------------------------------------PGLLGMRNNNGETALLRAARYGKVD  115 (466)
Q Consensus        82 ~v~~Ll~~~----------------------------------------------~~~~~~~d~~G~tpLh~Aa~~g~~~  115 (466)
                      +++.|++..                                              +..++.+|.+|+||||+|+..|+.+
T Consensus        93 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~  172 (255)
T d1oy3d_          93 CACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE  172 (255)
T ss_dssp             HHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccc
Confidence            888876421                                              1234567889999999999999999


Q ss_pred             HHHHHHhccCCCCCCCcccc-cccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHH
Q 037168          116 IFNFLAGKISGYDHATRLPF-LHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF  194 (466)
Q Consensus       116 ~v~~Ll~~~~~~~~~~~~~~-~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv  194 (466)
                      ++++|++.+.       +.+ .++..|.||||   .|++.|+.++++.|++ ++++++.+|+.|+||||+|+.+++.+++
T Consensus       173 ~v~~Ll~~~~-------~~~~~~~~~g~TpL~---~A~~~~~~~~v~~Ll~-~gadin~~d~~g~t~L~~A~~~~~~~i~  241 (255)
T d1oy3d_         173 MVRLLRDAGA-------DLNKPEPTCGRTPLH---LAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILA  241 (255)
T ss_dssp             HHHHHHHHTC-------CTTCCCTTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred             cccchhcccc-------ccccccccccccccc---ccccccHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence            9999999843       333 35678999999   6778999999999998 8999999999999999999999999999


Q ss_pred             HHHHhcCcc
Q 037168          195 ERVVQMEIP  203 (466)
Q Consensus       195 ~~Ll~~g~~  203 (466)
                      ++|+++||+
T Consensus       242 ~~Ll~~Ga~  250 (255)
T d1oy3d_         242 RLLRAHGAP  250 (255)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHcCCC
Confidence            999999986

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-30  Score=235.01  Aligned_cols=195  Identities=15%  Similarity=0.099  Sum_probs=167.5

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168           26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL  105 (466)
Q Consensus        26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL  105 (466)
                      ++|+||||+||+.|+.++++.|++...+ .+.+++.+|.+|+||||+|+..|+. ++++.|+++ ++..+..+.+|.+++
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~-~g~~in~~d~~g~TpL~~A~~~~~~-~iv~~Ll~~-ga~~~~~~~~~~~~~   77 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLP-SVVRLLVTA-GASPMALDRHGQTAA   77 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHH-CCCCCCccCCCCCccceehhccccc-ccccccccc-ccccccccccccccc
Confidence            4799999999999999999999974332 4667899999999999999999996 999999997 777899999999999


Q ss_pred             HHHHHcCCHHHHHHHHhccCCCCC-------------------------------CCcccccccCCCCChhhHHHHHhhc
Q 037168          106 LRAARYGKVDIFNFLAGKISGYDH-------------------------------ATRLPFLHRNDKTNVLHIAILSLHF  154 (466)
Q Consensus       106 h~Aa~~g~~~~v~~Ll~~~~~~~~-------------------------------~~~~~~~~d~~g~TpLh~A~~a~~~  154 (466)
                      +.|...++.++++.+.........                               ........+..|.+|||   .++..
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~---~a~~~  154 (228)
T d1k1aa_          78 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLI---HAVEN  154 (228)
T ss_dssp             HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHH---HHHHT
T ss_pred             ccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHH---HHHHh
Confidence            999999999999887664331100                               00112234567899999   77789


Q ss_pred             CcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168          155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA  231 (466)
Q Consensus       155 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~  231 (466)
                      +..++++.+++ .+...+.+|..|+||||+|+.+|+.+++++|+++|+|    +|.+|.+|+||||+|+++++.+++
T Consensus       155 ~~~~~~~~~~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad----~n~~d~~G~TpL~~A~~~~~~div  226 (228)
T d1k1aa_         155 NSLSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD----SSLKNCHNDTPLMVARSRRVIDIL  226 (228)
T ss_dssp             TCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred             hhhhhhhhhhh-hccccccccccCcchHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHhCCCcccc
Confidence            99999999998 8889999999999999999999999999999999998    999999999999999999887765

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.97  E-value=2.2e-30  Score=246.24  Aligned_cols=205  Identities=19%  Similarity=0.233  Sum_probs=180.3

Q ss_pred             ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168            3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV   82 (466)
Q Consensus         3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~   82 (466)
                      +||.+.|..++.++  ++++..|.+|.||||+|+..|+.++|++|++.+     .+....+..+.||||.|+..++. ++
T Consensus        50 ~G~~~~v~~Ll~~G--advn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~-----~~~~~~~~~~~~~L~~a~~~~~~-~~  121 (291)
T d1s70b_          50 SGDTEEVLRLLERG--ADINYANVDGLTALHQACIDDNVDMVKFLVENG-----ANINQPDNEGWIPLHAAASCGYL-DI  121 (291)
T ss_dssp             HTCHHHHHHHHHHC--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCH-HH
T ss_pred             cCCHHHHHHHHHCC--CCCCccCCCCCcHHHHHHhcCCceeeeeecccc-----ccccccccccccccccccccccc-ch
Confidence            58999999999876  778999999999999999999999999999954     45677888999999999999996 99


Q ss_pred             HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCC--------------------CCCCcccccccCCCC
Q 037168           83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGY--------------------DHATRLPFLHRNDKT  142 (466)
Q Consensus        83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~--------------------~~~~~~~~~~d~~g~  142 (466)
                      ++.|+++ +...+..|.+|.+|+++|+..++.+.++.++......                    ..........+.+|.
T Consensus       122 ~~~l~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  200 (291)
T d1s70b_         122 AEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG  200 (291)
T ss_dssp             HHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred             hhccccc-CcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCC
Confidence            9999988 6778899999999999999999999999988653211                    001123345677899


Q ss_pred             ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168          143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA  222 (466)
Q Consensus       143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA  222 (466)
                      ||||   .++..|+.++++.|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++    ++.+|++|+||||+|
T Consensus       201 t~L~---~a~~~~~~~~~~~Ll~-~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gad----v~~~d~~G~TaL~~A  272 (291)
T d1s70b_         201 TALH---VAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD----MEAVNKVGQTAFDVA  272 (291)
T ss_dssp             CHHH---HHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTTTSC
T ss_pred             Chhh---HHHHcCChhhhccccc-ceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHH
Confidence            9999   7778899999999998 8899999999999999999999999999999999999    899999999999999


Q ss_pred             hc
Q 037168          223 GI  224 (466)
Q Consensus       223 a~  224 (466)
                      ++
T Consensus       273 ~e  274 (291)
T d1s70b_         273 DE  274 (291)
T ss_dssp             CS
T ss_pred             HH
Confidence            86

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=1.3e-29  Score=228.70  Aligned_cols=205  Identities=20%  Similarity=0.170  Sum_probs=179.7

Q ss_pred             HHHHHHHhCCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHH
Q 037168            8 KVIELCRKVPDHALYV-FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKV   86 (466)
Q Consensus         8 ~v~~ll~~~~~~~~~~-~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~L   86 (466)
                      +|+++|.+. +.+++. .|.+|+||||+||+.|+.++++.|++     .+..++.+|..+.++++.++..++. ......
T Consensus         3 ~~v~~Ll~~-g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~-----~g~~~n~~~~~~~~~~~~~~~~~~~-~~~~~~   75 (209)
T d1ot8a_           3 QVISDLLAQ-GAELNATMDKTGETSLHLAARFARADAAKRLLD-----AGADANSQDNTGRTPLHAAVAADAM-GVFQIL   75 (209)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHH
T ss_pred             HHHHHHHHC-CCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHh-----hcccccccccccccccccccccccc-cccccc
Confidence            455555554 367875 68999999999999999999999999     5566889999999999999999886 666556


Q ss_pred             HHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH
Q 037168           87 LRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV  166 (466)
Q Consensus        87 l~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~  166 (466)
                      ..............|.++.+.+.........+.|.+.       +.+++.++..|+||||   .++..+..++++.+++ 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-------~~~~~~~~~~~~t~l~---~~~~~~~~~~~~~l~~-  144 (209)
T d1ot8a_          76 LRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITA-------DADINAADNSGKTALH---WAAAVNNTEAVNILLM-  144 (209)
T ss_dssp             HTCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHT-------TCCTTCBCTTSCBHHH---HHHHTTCHHHHHHHHH-
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhhh-------cccccccCCCCCCcch---hhcccCcceeeeeecc-
Confidence            5555555666778899999999999999999999987       5677888999999999   7778899999999998 


Q ss_pred             CCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          167 YPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       167 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      .+.+++.+|..|+||||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|+++|+.+++++|
T Consensus       145 ~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad----~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         145 HHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN----REITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             ccccccccccccccccchhccccHHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            7889999999999999999999999999999999998    899999999999999999999998665

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.7e-29  Score=247.92  Aligned_cols=212  Identities=21%  Similarity=0.168  Sum_probs=182.4

Q ss_pred             cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc----------------------------
Q 037168            4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQS----------------------------   55 (466)
Q Consensus         4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~----------------------------   55 (466)
                      ++.+.+..++..+  .+++..+.+|.+|||+|+..|+.++++.|++.+.+..                            
T Consensus       143 ~~~~~v~~ll~~~--~~~~~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~  220 (408)
T d1n11a_         143 GKVRVAELLLERD--AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQY  220 (408)
T ss_dssp             TCHHHHHHHHHTT--CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CCHHHHHHHHHcC--CCCCcCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhc
Confidence            4555555555554  6678889999999999999999999999998765421                            


Q ss_pred             hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccc
Q 037168           56 LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPF  135 (466)
Q Consensus        56 ~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~  135 (466)
                      .......+..|.||||+|+..++. ++++.+++. +...+..|..|.||||.|+..++.+++++|++.       +.+++
T Consensus       221 ~~~~~~~~~~~~t~l~~a~~~~~~-~~~~~~~~~-~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~-------g~~~~  291 (408)
T d1n11a_         221 GGSANAESVQGVTPLHLAAQEGHA-EMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH-------GVMVD  291 (408)
T ss_dssp             TCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-------TCCTT
T ss_pred             cccccccCCCCCCHHHHHHHhCcH-hHhhhhhcc-ccccccccCCCCChhhhhhhcCcHHHHHHHHHC-------CCccc
Confidence            112233566778888888888885 888888777 566888899999999999999999999999998       66788


Q ss_pred             cccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCC
Q 037168          136 LHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG  215 (466)
Q Consensus       136 ~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G  215 (466)
                      ..+.++.||||   .++..++.++++.+++ .+.+++.+|.+|+||||+|+++|+.+++++|+++|++    +|.+|++|
T Consensus       292 ~~~~~~~t~L~---~~~~~~~~~~~~~ll~-~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd----~n~~d~~G  363 (408)
T d1n11a_         292 ATTRMGYTPLH---VASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS----PNEVSSDG  363 (408)
T ss_dssp             CCCSSCCCHHH---HHHHSSCSHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCSSS
T ss_pred             cccccccccch---hhcccCcceeeeeecc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCC
Confidence            88899999999   7778999999999998 8999999999999999999999999999999999999    99999999


Q ss_pred             CCchhhhhccCcchhhhcc
Q 037168          216 NTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       216 ~TpLHlAa~~~~~~~~~~l  234 (466)
                      +||||+|++.|+.+++++|
T Consensus       364 ~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         364 TTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             CCHHHHHHHTTCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHH
Confidence            9999999999999988765

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=6.6e-30  Score=240.66  Aligned_cols=209  Identities=15%  Similarity=0.161  Sum_probs=165.0

Q ss_pred             CcHHHHHHHc-CCHHHHHHHHHhCCCCchhhhhccC-CCCChHHHHHHHcCCcHHHHHHHHHh-------CCCcccCcCC
Q 037168           29 DTVLHMATYT-KKSDLVIKLLDELPDQSLDKMTRQN-KAGNTILHETATSNHALPVADKVLRK-------APGLLGMRNN   99 (466)
Q Consensus        29 ~T~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~~~v~~Ll~~-------~~~~~~~~d~   99 (466)
                      +||||+|++. |+.++++.|.+.       .++..| ++|+||||+||..|+. ++++.|+.+       .|+++|.+|.
T Consensus         1 ~~p~~~~~~~~~~~~~~~~l~~~-------~~n~~~~~~g~T~Lh~A~~~g~~-~~v~~Ll~~~~~~~l~~Gadvn~~d~   72 (277)
T d2fo1e1           1 ESPIKLHTEAAGSYAITEPITRE-------SVNIIDPRHNRTVLHWIASNSSA-EKSEDLIVHEAKECIAAGADVNAMDC   72 (277)
T ss_dssp             CCCCHHHHHHHSSSCCCSCCSTT-------TTTTCCCSSCCCHHHHHHCTTCC-SCCTTHHHHHHHHHHHTCCCTTCCCT
T ss_pred             CChHHHHHHhCCCHHHHHHHHhc-------CCCcCCCCCCccHHHHHHHcCCH-HHHHHHHhcchhHHHHcCCCccccCC
Confidence            5899977754 566666656553       234444 4699999999999997 888877543       4789999999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH--------------
Q 037168          100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS--------------  165 (466)
Q Consensus       100 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~--------------  165 (466)
                      +|+||||+|++.|+.+++++|+++       |++++.+|.+|+||||   .+...++.++++.+..              
T Consensus        73 ~G~TpLh~A~~~g~~~iv~~Ll~~-------Gad~n~~~~~g~t~l~---~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~  142 (277)
T d2fo1e1          73 DENTPLMLAVLARRRRLVAYLMKA-------GADPTIYNKSERSALH---QAAANRDFGMMVYMLNSTKLKGDIEELDRN  142 (277)
T ss_dssp             TSCCHHHHHHHHTCHHHHHHHHHT-------TCCSCCCCTTCCCHHH---HHHHTTCHHHHHHHTTSHHHHHTTSCCCTT
T ss_pred             CCCeeecccccccccccccccccc-------cccccccccccccccc---chhhhcchhhhhhhhhcccccccccccccc
Confidence            999999999999999999999998       6788999999999999   5555555555554432              


Q ss_pred             -------------------------HC-------CCcccccccCCChHHHHHHHcCChhHHHHHH-hcCccccccccccc
Q 037168          166 -------------------------VY-------PQAVEHIDDEGRNILHVAIKYRQLEIFERVV-QMEIPLRRLVRKID  212 (466)
Q Consensus       166 -------------------------~~-------~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll-~~g~~~~~~~~~~d  212 (466)
                                               ..       ....+..+..|+||||.++..++.+++++++ ..+.+    .+.+|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~----~~~~d  218 (277)
T d2fo1e1         143 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN----KDKQD  218 (277)
T ss_dssp             SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC----TTCCC
T ss_pred             cchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcccccccccccccccccccccccc----ccccC
Confidence                                     10       0112345678999999999999999998765 45555    78899


Q ss_pred             CCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          213 YNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       213 ~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      ..|+||||+|++.|+.++++.|                   +..+.+++.+|++|+||+++|.+..
T Consensus       219 ~~g~tpL~~A~~~g~~~iv~~L-------------------l~~gadin~~d~~G~T~L~~A~~~~  265 (277)
T d2fo1e1         219 EDGKTPIMLAAQEGRIEVVMYL-------------------IQQGASVEAVDATDHTARQLAQANN  265 (277)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHH-------------------HHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHH-------------------HHCcCCCCCcCCCCCCHHHHHHHcC
Confidence            9999999999999999998766                   2345667999999999999998765

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-27  Score=225.60  Aligned_cols=219  Identities=21%  Similarity=0.193  Sum_probs=177.6

Q ss_pred             CccchHHHHHHHHhCCCcccccc-CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc-------------------------
Q 037168            2 IKQDEQKVIELCRKVPDHALYVF-TIHDDTVLHMATYTKKSDLVIKLLDELPDQS-------------------------   55 (466)
Q Consensus         2 ~~g~~~~v~~ll~~~~~~~~~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~-------------------------   55 (466)
                      .+||.+.|..+++++  .+++.. +..|+||||+|+..|+.++++.|++.++...                         
T Consensus        14 ~~~~~e~vk~Ll~~G--~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (285)
T d1wdya_          14 QNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF   91 (285)
T ss_dssp             HTTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             HcCCHHHHHHHHHCC--CCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchh
Confidence            367888888777765  556644 5579999999999999999999998765421                         


Q ss_pred             ---hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCC---------cccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168           56 ---LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPG---------LLGMRNNNGETALLRAARYGKVDIFNFLAGK  123 (466)
Q Consensus        56 ---~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~---------~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~  123 (466)
                         ..+....+..|.|+++.|+..++. ..++.++.....         .....+..|.||||+|++.|+.+++++|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~  170 (285)
T d1wdya_          92 LSKGADVNECDFYGFTAFMEAAVYGKV-KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE  170 (285)
T ss_dssp             HHTTCCTTCBCTTCCBHHHHHHHTTCH-HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             hhhcccccccccCCCchhHHHHHhcch-hhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhc
Confidence               112234567788999999999886 777777765321         1223456799999999999999999999976


Q ss_pred             cCCCCCCCcccccccCCCCChhhHHHHHhhcC-cHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHh-cC
Q 037168          124 ISGYDHATRLPFLHRNDKTNVLHIAILSLHFG-CIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ-ME  201 (466)
Q Consensus       124 ~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g-~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~g  201 (466)
                      .      +.+++.+|..|.++++.+..++..+ ..++++.|++ .+++++.+|..|+||||.|++.|+.+++++|++ .|
T Consensus       171 ~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~-~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g  243 (285)
T d1wdya_         171 M------GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH  243 (285)
T ss_dssp             S------CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS
T ss_pred             c------CCCcccccCCCCcccccccccccchHHHHHHHHHHH-CCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCC
Confidence            2      4678889999999988665555444 4568899998 799999999999999999999999999999997 47


Q ss_pred             cccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          202 IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       202 ~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      ++    +|.+|.+|+||||+|++.++.+++++|
T Consensus       244 ~d----in~~d~~G~TpL~~A~~~~~~eiv~~L  272 (285)
T d1wdya_         244 IE----INDTDSDGKTALLLAVELKLKKIAELL  272 (285)
T ss_dssp             CC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CC----CcCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence            77    999999999999999999999999877

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.6e-28  Score=206.31  Aligned_cols=154  Identities=19%  Similarity=0.209  Sum_probs=142.8

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      +|||+||..|+.++|+.|++     ++++++.+|.+|.||||+|+ .|+. +++++|+++ +.+++.++.+|.+|++.++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~-----~g~d~n~~d~~g~TpL~~A~-~~~~-ei~~~Ll~~-~a~~~~~~~~~~~~l~~~~   74 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQ-----NNVNVNAQNGFGRTALQVMK-LGNP-EIARRLLLR-GANPDLKDRTGFAVIHDAA   74 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTT-----SCCCTTCCCTTSCCHHHHCC-SSCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHH-----CCCCcCccCCcccccccccc-cccc-ccccccccc-ccccccccccCcccccccc
Confidence            89999999999999999999     56678999999999999886 6886 999999988 6779999999999999999


Q ss_pred             HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC
Q 037168          110 RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR  189 (466)
Q Consensus       110 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~  189 (466)
                      ..++.+.++.|++.       +...+..|..|.+|+|   .|+..++.++++.|++..+.+.+.+|.+|+||||+|++++
T Consensus        75 ~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~l~---~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~  144 (156)
T d1ihba_          75 RAGFLDTLQTLLEF-------QADVNIEDNEGNLPLH---LAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG  144 (156)
T ss_dssp             HHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred             cccccccccccccc-------cccccccccccccccc---cccccccccccccccccccccccccCCCCCCHHHHHHHcC
Confidence            99999999999988       5567788999999999   7778999999999999888899999999999999999999


Q ss_pred             ChhHHHHHHhcC
Q 037168          190 QLEIFERVVQME  201 (466)
Q Consensus       190 ~~~iv~~Ll~~g  201 (466)
                      +.+++++|+++|
T Consensus       145 ~~~iv~~Ll~~G  156 (156)
T d1ihba_         145 RNEVVSLMQANG  156 (156)
T ss_dssp             CHHHHHHHHHTC
T ss_pred             CHHHHHHHHhcC
Confidence            999999999986

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-26  Score=218.02  Aligned_cols=220  Identities=22%  Similarity=0.209  Sum_probs=169.1

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccC-CCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC------
Q 037168           27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTILHETATSNHALPVADKVLRKAPGLLGMRNN------   99 (466)
Q Consensus        27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~------   99 (466)
                      +++|+||.|++.|+.++|++|++     +|++++.++ ..|.||||+|+..|+. ++++.|++.+ ......+.      
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~-----~G~din~~~~~~g~tpL~~A~~~~~~-eiv~~L~~~~-~~~~~~~~~~~~~~   76 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLE-----GGANVNFQEEEGGWTPLHNAVQMSRE-DIVELLLRHG-ADPVLRKKNGATPF   76 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTT-CCTTCCCTTCCCHH
T ss_pred             CCcHHHHHHHHcCCHHHHHHHHH-----CCCCcCccCCCCCCCHHHHHHHcCCH-HHhhhhcccc-ccccccccccchhh
Confidence            46899999999999999999999     455676554 5799999999999996 9999998763 33443444      


Q ss_pred             ---------------------------CCChHHHHHHHcCCHHHHHHHHhccCCCCC---CCcccccccCCCCChhhHHH
Q 037168          100 ---------------------------NGETALLRAARYGKVDIFNFLAGKISGYDH---ATRLPFLHRNDKTNVLHIAI  149 (466)
Q Consensus       100 ---------------------------~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~---~~~~~~~~d~~g~TpLh~A~  149 (466)
                                                 .|.|+++.|+..|+...++.++......+.   ........+..|.||||   
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~---  153 (285)
T d1wdya_          77 LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM---  153 (285)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHH---
T ss_pred             HHHhhcCCccccchhhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHH---
Confidence                                       455555555555555555555544322111   01122234567999999   


Q ss_pred             HHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC----ChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168          150 LSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR----QLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK  225 (466)
Q Consensus       150 ~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~----~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~  225 (466)
                      .|+.+|+.++++.|++..+.+++..|..|+++++.+...+    ..+++++|+++|++    ++.+|..|+||||.|++.
T Consensus       154 ~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~----~n~~~~~g~t~L~~a~~~  229 (285)
T d1wdya_         154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVRGERGKTPLILAVEK  229 (285)
T ss_dssp             HHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC----SSCCCTTSCCHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCC----CCccCCCCCCccchhhhc
Confidence            7778899999999999889999999999999988876654    35799999999998    899999999999999999


Q ss_pred             CcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168          226 RKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN  278 (466)
Q Consensus       226 ~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~  278 (466)
                      ++.++++.+.                  ...+.+++.+|.+|.||+++|.+..
T Consensus       230 ~~~~~v~~lL------------------~~~g~din~~d~~G~TpL~~A~~~~  264 (285)
T d1wdya_         230 KHLGLVQRLL------------------EQEHIEINDTDSDGKTALLLAVELK  264 (285)
T ss_dssp             TCHHHHHHHH------------------HSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CcHHHHHHHH------------------HcCCCCCcCCCCCCCCHHHHHHHcC
Confidence            9988876551                  1235567899999999999998765

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=199.57  Aligned_cols=152  Identities=18%  Similarity=0.196  Sum_probs=135.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      +.||.||..|+.++|+.|++.    .+.+++.+|..|+||||+|+. |+. +++++|++. +.+++.++..|.+|++.++
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~----~~~~~n~~d~~g~t~L~~A~~-~~~-~~v~~Ll~~-~~~~~~~~~~~~~~l~~~~   76 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHR----ELVHPDALNRFGKTALQVMMF-GST-AIALELLKQ-GASPNVQDTSGTSPVHDAA   76 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHT----TCCCTTCCCTTSCCHHHHSCT-TCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHh----CCCCCCccCCCCCcccccccc-ccc-ccccccccc-ccccccccccccccccccc
Confidence            459999999999999999985    345788999999999999874 775 899999987 5678999999999999999


Q ss_pred             HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC
Q 037168          110 RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR  189 (466)
Q Consensus       110 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~  189 (466)
                      ..++.++++.+++.       +.+++.+|.+|+||||   .|+..|+.+++++|+  .+.+++.+|.+|+||||+|+++|
T Consensus        77 ~~~~~~~~~~~l~~-------~~~~n~~~~~~~t~L~---~A~~~~~~~i~~~L~--~~~~~~~~d~~G~TpL~~A~~~g  144 (156)
T d1bd8a_          77 RTGFLDTLKVLVEH-------GADVNVPDGTGALPIH---LAVQEGHTAVVSFLA--AESDLHRRDARGLTPLELALQRG  144 (156)
T ss_dssp             HTTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHHTCHHHHHHHH--TTSCTTCCCTTSCCHHHHHHHSC
T ss_pred             cccccccccccccc-------ccccccccCCCCeeec---ccccccccccccccc--ccccccccCCCCCCHHHHHHHcC
Confidence            99999999999998       5678889999999999   667889999999776  46789999999999999999999


Q ss_pred             ChhHHHHHHhc
Q 037168          190 QLEIFERVVQM  200 (466)
Q Consensus       190 ~~~iv~~Ll~~  200 (466)
                      +.+++++|+++
T Consensus       145 ~~~iv~~Ll~h  155 (156)
T d1bd8a_         145 AQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHHTT
T ss_pred             CHHHHHHHHhh
Confidence            99999999875

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-26  Score=199.03  Aligned_cols=149  Identities=17%  Similarity=0.182  Sum_probs=137.3

Q ss_pred             hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168           68 TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI  147 (466)
Q Consensus        68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~  147 (466)
                      +.||.||..|+. ++++.|+++++.+++.+|..|+||||+|+ .|+.+++++|++.       +.+++.++.+|.+|++ 
T Consensus         4 ~~L~~Aa~~g~~-~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~-------~~~~~~~~~~~~~~l~-   73 (156)
T d1bd8a_           4 DRLSGAAARGDV-QEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQ-------GASPNVQDTSGTSPVH-   73 (156)
T ss_dssp             HHHHHHHHHTCH-HHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH-
T ss_pred             HHHHHHHHcCCH-HHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccc-------cccccccccccccccc-
Confidence            459999999997 99999999989999999999999999987 5889999999998       5677888899999999 


Q ss_pred             HHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          148 AILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       148 A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                        .++..++.++++.+++ .+.+++.+|+.|+||||+|+..|+.+++++|+ .|++    ++.+|.+|+||||+|++.|+
T Consensus        74 --~~~~~~~~~~~~~~l~-~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~----~~~~d~~G~TpL~~A~~~g~  145 (156)
T d1bd8a_          74 --DAARTGFLDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESD----LHRRDARGLTPLELALQRGA  145 (156)
T ss_dssp             --HHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSC----TTCCCTTSCCHHHHHHHSCC
T ss_pred             --cccccccccccccccc-cccccccccCCCCeeecccccccccccccccc-cccc----ccccCCCCCCHHHHHHHcCC
Confidence              7789999999999998 78899999999999999999999999999888 5677    89999999999999999999


Q ss_pred             chhhhcc
Q 037168          228 DYVAEKM  234 (466)
Q Consensus       228 ~~~~~~l  234 (466)
                      .+++++|
T Consensus       146 ~~iv~~L  152 (156)
T d1bd8a_         146 QDLVDIL  152 (156)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998766

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=5.2e-27  Score=224.49  Aligned_cols=183  Identities=16%  Similarity=0.120  Sum_probs=125.0

Q ss_pred             cccc-cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH--HHHHHHHHhCCCcccC
Q 037168           20 ALYV-FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL--PVADKVLRKAPGLLGM   96 (466)
Q Consensus        20 ~~~~-~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~--~~v~~Ll~~~~~~~~~   96 (466)
                      +++. .|.+|+||||+||..|+.++|+.|++     .|++++.+|..|+||||.|+..++..  +.++.+++.....+..
T Consensus        98 dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~-----~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~  172 (301)
T d1sw6a_          98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVK-----HGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL  172 (301)
T ss_dssp             CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred             CcCcCcCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhh
Confidence            4553 38999999999999999999999999     56778999999999999999876420  1122233322334778


Q ss_pred             cCCCCChHHHHHHHcCC----HHHH--------HHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHH----
Q 037168           97 RNNNGETALLRAARYGK----VDIF--------NFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIV----  160 (466)
Q Consensus        97 ~d~~G~tpLh~Aa~~g~----~~~v--------~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v----  160 (466)
                      +|..|+||||+++..+.    .+++        +.+.+...      .........+.++++.   +........+    
T Consensus       173 ~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  243 (301)
T d1sw6a_         173 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN------RPIQSGTNEKESKPND---KNGERKDSILENLD  243 (301)
T ss_dssp             ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG------CCEEEC-------------------CHHHHHCS
T ss_pred             cccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCC------cchhcccccccchhHH---HHhcchHHHHHHHh
Confidence            89999999999887544    3333        33333321      2233344456666663   2222222222    


Q ss_pred             -HHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhh
Q 037168          161 -KDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAG  223 (466)
Q Consensus       161 -~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa  223 (466)
                       ..++.   ..+|.+|.+|+||||+|+++|+.+++++|+++|++    ++.+|++|.||||+|+
T Consensus       244 ~~~~~~---~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd----~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         244 LKWIIA---NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD----PFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHHHHH---HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC----TTCCCTTSCCGGGGTC
T ss_pred             hHHHHh---cCccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHcC
Confidence             12222   34788999999999999999999999999999999    9999999999999997

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=5.2e-26  Score=194.63  Aligned_cols=150  Identities=20%  Similarity=0.171  Sum_probs=119.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRA  108 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A  108 (466)
                      .||||.||+.|+.++|+.||+.++     +++ .|..|+||||+|+..++. ++++.++.. +......+..+.+++|.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga-----~~~-~~~~g~t~L~~a~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~   74 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGA-----PFT-TDWLGTSPLHLAAQYGHF-STTEVLLRA-GVSRDARTKVDRTPLHMA   74 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTC-----CCC-CCTTCCCHHHHHHHHTCH-HHHHHHHTT-TCCTTCCCTTCCCHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCC-----Ccc-cccCCCcccccccccccc-ccccccccc-cccccccccccccccccc
Confidence            488888888888888888888554     333 578888888888888885 888777776 344566777788888888


Q ss_pred             HHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHc
Q 037168          109 ARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKY  188 (466)
Q Consensus       109 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~  188 (466)
                      +...+.++++++.+.       +.+.+.+|.+|+||||   .|+..|+.+++++|++ ++++++.+|++|+||||+|+.+
T Consensus        75 ~~~~~~~~~~~l~~~-------~~~~~~~~~~g~T~L~---~A~~~g~~~iv~~ll~-~gad~~~~d~~g~Tpl~~A~~~  143 (153)
T d1awcb_          75 ASEGHANIVEVLLKH-------GADVNAKDMLKMTALH---WATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDN  143 (153)
T ss_dssp             HHHTCHHHHHHHHTT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccceeeeccccc-------CCccccccccCchHHH---hhhhcchhheeeeccc-cccCCcccCCCCCCHHHHHHHc
Confidence            888888888888877       5566778888888888   6668888888888887 7888888888888888888888


Q ss_pred             CChhHHHHH
Q 037168          189 RQLEIFERV  197 (466)
Q Consensus       189 ~~~~iv~~L  197 (466)
                      |+.|++++|
T Consensus       144 g~~eiv~lL  152 (153)
T d1awcb_         144 GNEDLAEIL  152 (153)
T ss_dssp             TCHHHHHHH
T ss_pred             CCHHHHHhC
Confidence            888888765

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=2.6e-28  Score=238.16  Aligned_cols=200  Identities=13%  Similarity=0.033  Sum_probs=154.7

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHH---HHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCc
Q 037168           21 LYVFTIHDDTVLHMATYTKKSDLVIK---LLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMR   97 (466)
Q Consensus        21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~   97 (466)
                      ++..+..|.||||+||++|+.++++.   |++     .+++++.+|.+|.||||+||+.|+. ++|++|++. +++++..
T Consensus        83 ~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~-----~~~~in~~~~~g~taL~~Aa~~G~~-~~v~~Ll~~-g~~~~~~  155 (346)
T d2ajaa1          83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLT-----SDEIVKVIQAENYQAFRLAAENGHL-HVLNRLCEL-APTEIMA  155 (346)
T ss_dssp             HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC-------CCSSCC--CHHHHHHHHHHHHTTCH-HHHHHHHHS-CTTTHHH
T ss_pred             HHhccCCCCcHHHHHHHhCCHHHHHHHHHHHh-----CCCcccccCCCCCCHHHHHHHCCCH-HHHHHHHHc-CCCcccc
Confidence            45668899999999999999988776   555     5678899999999999999999997 999999998 5567766


Q ss_pred             C--CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc-
Q 037168           98 N--NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI-  174 (466)
Q Consensus        98 d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~-  174 (466)
                      +  .+|+||||+||.+|+.+++++|++.++.    ....+..+.+|.||+|   .|+..|+.+++++|++ .|++++.. 
T Consensus       156 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~----~~~~~~~~~~~~t~l~---~A~~~g~~~iv~~Ll~-~ga~~~~~~  227 (346)
T d2ajaa1         156 MIQAENYHAFRLAAENGHLHVLNRLCELAPT----EATAMIQAENYYAFRW---AAVGRGHHNVINFLLD-CPVMLAYAE  227 (346)
T ss_dssp             HHSHHHHHHHHHHHHTTCHHHHHHHHHSCGG----GHHHHHHHHHHHHHHH---HHSTTCCHHHHHHHTT-SHHHHHHHH
T ss_pred             ccccCCCChhHHHHHHhhHHHHHHHHHcCCc----ccccccccCCCcchhh---HHhhcCHHHHHHHHHh-CCCCcchHH
Confidence            5  4699999999999999999999998431    1123445567788888   7788999999999987 44322211 


Q ss_pred             --------------------------------cc----------------CCChHHHHHHHcCChhHHHHHHhcCcccc-
Q 037168          175 --------------------------------DD----------------EGRNILHVAIKYRQLEIFERVVQMEIPLR-  205 (466)
Q Consensus       175 --------------------------------d~----------------~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~-  205 (466)
                                                      +.                .+.++||.|+..++.+++++|++.+.... 
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~  307 (346)
T d2ajaa1         228 IHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKAL  307 (346)
T ss_dssp             HCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGG
T ss_pred             HHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhh
Confidence                                            01                12467888888899999999998875421 


Q ss_pred             cccccccCCCCCchhhhhccCcchhhhccC
Q 037168          206 RLVRKIDYNGNTIFHMAGIKRKDYVAEKME  235 (466)
Q Consensus       206 ~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~  235 (466)
                      ...+..+.+|+||||+|++.|+.+++++|.
T Consensus       308 ~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL  337 (346)
T d2ajaa1         308 APTATIPGDANELLRLALRLGNQGACALLL  337 (346)
T ss_dssp             SSCCSSTTCCCHHHHHHHHHTCTTHHHHHT
T ss_pred             cccccCCCCCCcHHHHHHHcCcHHHHHHHh
Confidence            123455678999999999999999998774

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=5.5e-26  Score=204.67  Aligned_cols=199  Identities=18%  Similarity=0.202  Sum_probs=170.8

Q ss_pred             HHHHHHHHHhCCCCchhhhhc-cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHH
Q 037168           41 SDLVIKLLDELPDQSLDKMTR-QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNF  119 (466)
Q Consensus        41 ~~~v~~Ll~~~~~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~  119 (466)
                      .|+|+.||+     +|.+++. .|.+|+||||+||..|+. ++++.|++. +..++.+|..+.++++.++..++.+....
T Consensus         2 ~~~v~~Ll~-----~g~din~~~d~~G~t~L~~A~~~g~~-e~v~~Ll~~-g~~~n~~~~~~~~~~~~~~~~~~~~~~~~   74 (209)
T d1ot8a_           2 AQVISDLLA-----QGAELNATMDKTGETSLHLAARFARA-DAAKRLLDA-GADANSQDNTGRTPLHAAVAADAMGVFQI   74 (209)
T ss_dssp             HHHHHHHHH-----HHHHHHHHHHHHCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHH-----CCCCcCcCcCCCCCCHHHHHHHcCCH-HHHHHHHhh-ccccccccccccccccccccccccccccc
Confidence            589999999     7788987 589999999999999997 999999998 67799999999999999999999888777


Q ss_pred             HHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHh
Q 037168          120 LAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ  199 (466)
Q Consensus       120 Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~  199 (466)
                      ......      ......+..|.++.+   .+.........+.|.. .+.+++.+|..|+||||.|+.+++.++++.+++
T Consensus        75 ~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~  144 (209)
T d1ot8a_          75 LLRNRA------TNLNARMHDGTTPLI---LAARLAIEGMVEDLIT-ADADINAADNSGKTALHWAAAVNNTEAVNILLM  144 (209)
T ss_dssp             HHTCTT------CCTTCCCTTCCCHHH---HHHHTTCTTHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred             cccccc------ccccccccccccccc---ccccccchhhhhhhhh-hcccccccCCCCCCcchhhcccCcceeeeeecc
Confidence            766532      223334556888888   5666677778888877 889999999999999999999999999999999


Q ss_pred             cCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhH
Q 037168          200 MEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANN  279 (466)
Q Consensus       200 ~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~  279 (466)
                      .+.+    ++.+|.+|+||||+|+..|+.++++.|                   +..+.+++.+|.+|+||+++|.+...
T Consensus       145 ~~~~----~~~~d~~g~TpL~~A~~~g~~~~v~~L-------------------l~~gad~n~~d~~g~Tpl~~A~~~~~  201 (209)
T d1ot8a_         145 HHAN----RDAQDDKDETPLFLAAREGSYEASKAL-------------------LDNFANREITDHMDRLPRDVASERLH  201 (209)
T ss_dssp             TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cccc----ccccccccccccchhccccHHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence            9988    899999999999999999999998766                   23455678999999999999987653

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=3.5e-26  Score=195.76  Aligned_cols=150  Identities=19%  Similarity=0.145  Sum_probs=135.1

Q ss_pred             ChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhh
Q 037168           67 NTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLH  146 (466)
Q Consensus        67 ~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh  146 (466)
                      .||||.||+.|+. ++++.|+++ +++++ .|..|+||||+|+..++.++++.++....       .....+..+.++++
T Consensus         3 ~t~L~~Aa~~g~~-~~v~~LL~~-ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~   72 (153)
T d1awcb_           3 GKKLLEAARAGQD-DEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-------SRDARTKVDRTPLH   72 (153)
T ss_dssp             HHHHHHHHHHTCH-HHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-------CTTCCCTTCCCHHH
T ss_pred             CHHHHHHHHCCCH-HHHHHHHHc-CCCcc-cccCCCccccccccccccccccccccccc-------cccccccccccccc
Confidence            4999999999997 999999999 55555 79999999999999999999999998733       44455677889999


Q ss_pred             HHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccC
Q 037168          147 IAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR  226 (466)
Q Consensus       147 ~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~  226 (466)
                         .++...+.++++.++. .+.+.+.+|.+|+||||+|+..|+.+++++|+++|++    ++.+|++|+||||+|+.+|
T Consensus        73 ---~~~~~~~~~~~~~l~~-~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad----~~~~d~~g~Tpl~~A~~~g  144 (153)
T d1awcb_          73 ---MAASEGHANIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----VHTQSKFCKTAFDISIDNG  144 (153)
T ss_dssp             ---HHHHHTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTT
T ss_pred             ---cccccccceeeecccc-cCCccccccccCchHHHhhhhcchhheeeeccccccC----CcccCCCCCCHHHHHHHcC
Confidence               6778899999999987 7889999999999999999999999999999999998    9999999999999999999


Q ss_pred             cchhhhcc
Q 037168          227 KDYVAEKM  234 (466)
Q Consensus       227 ~~~~~~~l  234 (466)
                      +.+++++|
T Consensus       145 ~~eiv~lL  152 (153)
T d1awcb_         145 NEDLAEIL  152 (153)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHhC
Confidence            99988665

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-26  Score=197.82  Aligned_cols=150  Identities=23%  Similarity=0.258  Sum_probs=138.9

Q ss_pred             hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168           68 TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI  147 (466)
Q Consensus        68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~  147 (466)
                      +|||+||..|+. ++++.|+++ +++++.+|.+|+||||+|+ .|+.+++++|+++       +.+++.++.+|.+|++ 
T Consensus         3 ~~Lh~Aa~~g~~-~~v~~Ll~~-g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~-------~a~~~~~~~~~~~~l~-   71 (156)
T d1ihba_           3 NELASAAARGDL-EQLTSLLQN-NVNVNAQNGFGRTALQVMK-LGNPEIARRLLLR-------GANPDLKDRTGFAVIH-   71 (156)
T ss_dssp             HHHHHHHHHTCH-HHHHHHTTS-CCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHT-------TCCTTCCCTTSCCHHH-
T ss_pred             HHHHHHHHcCCH-HHHHHHHHC-CCCcCccCCcccccccccc-ccccccccccccc-------ccccccccccCccccc-
Confidence            899999999997 999999998 7889999999999999886 7999999999998       6788899999999999 


Q ss_pred             HHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168          148 AILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK  227 (466)
Q Consensus       148 A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~  227 (466)
                        .++..++.+.++.+++ ++.+++..|..|.+|||+|+..++.+++++|+++++.   ..+.+|.+|+||||+|++.++
T Consensus        72 --~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~---~~~~~d~~g~TpL~~A~~~~~  145 (156)
T d1ihba_          72 --DAARAGFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACDLARLYGR  145 (156)
T ss_dssp             --HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHHHHHHTTC
T ss_pred             --cccccccccccccccc-ccccccccccccccccccccccccccccccccccccc---cccccCCCCCCHHHHHHHcCC
Confidence              7778999999999998 7888999999999999999999999999999998862   278999999999999999999


Q ss_pred             chhhhcc
Q 037168          228 DYVAEKM  234 (466)
Q Consensus       228 ~~~~~~l  234 (466)
                      .+++++|
T Consensus       146 ~~iv~~L  152 (156)
T d1ihba_         146 NEVVSLM  152 (156)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998766

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.3e-26  Score=204.63  Aligned_cols=182  Identities=18%  Similarity=0.170  Sum_probs=146.7

Q ss_pred             CCChHHHHHHHcCCcHHHHHHHHH---hCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC
Q 037168           65 AGNTILHETATSNHALPVADKVLR---KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK  141 (466)
Q Consensus        65 ~G~TpLh~Aa~~g~~~~~v~~Ll~---~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g  141 (466)
                      +|+||||+||..|+. ++++.|++   ..+.+++.+|.+|+||||+|+..|+.+++++|++.       +++.+..+.+|
T Consensus         2 dG~TpLh~A~~~g~~-~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~-------ga~~~~~~~~~   73 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNL-PAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA-------GASPMALDRHG   73 (228)
T ss_dssp             TTCCHHHHHHHTTCH-HHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTS
T ss_pred             CCccHHHHHHHcCCH-HHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccc-------ccccccccccc
Confidence            699999999999997 99999886   36888999999999999999999999999999998       44555555666


Q ss_pred             CChhhHHH----------------------------------HHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168          142 TNVLHIAI----------------------------------LSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK  187 (466)
Q Consensus       142 ~TpLh~A~----------------------------------~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~  187 (466)
                      .++++.|.                                  .+.........+.+...........+..|.++||.|+.
T Consensus        74 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~  153 (228)
T d1k1aa_          74 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE  153 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred             ccccccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHH
Confidence            66666321                                  22223444555555554444445566789999999999


Q ss_pred             cCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCC
Q 037168          188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMG  267 (466)
Q Consensus       188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g  267 (466)
                      .+..++++.++++|.+    .+.+|..|+||||+|+..|+.++++.|                   +..+.+++.+|.+|
T Consensus       154 ~~~~~~~~~~~~~~~~----~~~~d~~g~t~L~~A~~~g~~~~v~~L-------------------l~~Gad~n~~d~~G  210 (228)
T d1k1aa_         154 NNSLSMVQLLLQHGAN----VNAQMYSGSSALHSASGRGLLPLVRTL-------------------VRSGADSSLKNCHN  210 (228)
T ss_dssp             TTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTS
T ss_pred             hhhhhhhhhhhhhccc----cccccccCcchHHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCC
Confidence            9999999999999987    889999999999999999999988766                   23456679999999


Q ss_pred             CChHHHHHHH
Q 037168          268 FIPEELFAIA  277 (466)
Q Consensus       268 ~Tp~~l~~~~  277 (466)
                      +||+++|.+.
T Consensus       211 ~TpL~~A~~~  220 (228)
T d1k1aa_         211 DTPLMVARSR  220 (228)
T ss_dssp             CCTTTTCSSH
T ss_pred             CCHHHHHHhC
Confidence            9999998654

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-26  Score=207.50  Aligned_cols=168  Identities=19%  Similarity=0.186  Sum_probs=148.4

Q ss_pred             ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhC-----CCc
Q 037168           19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKA-----PGL   93 (466)
Q Consensus        19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~-----~~~   93 (466)
                      ..++..|.+|+||||+||+.|+.+++++|++     .+++++.+|..|.||||+|+..|+. ++++.|++..     ...
T Consensus        30 ~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~-----~g~d~~~~d~~g~t~l~~~~~~~~~-~~~~~l~~~~~~~~~~~~  103 (221)
T d1iknd_          30 AFLNFQNNLQQTPLHLAVITNQPEIAEALLG-----AGCDPELRDFRGNTPLHLACEQGCL-ASVGVLTQSCTTPHLHSI  103 (221)
T ss_dssp             CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCS-----CCCCSCCCCTTCCCHHHHHHHHTCH-HHHHHHHHSTTTTSSSCG
T ss_pred             CCcccCCCCCCcccccccccccccccccccc-----ccccccccccccccccccccccccc-cccchhhhhccccccccc
Confidence            5688899999999999999999999999999     5567888999999999999999996 9999998763     233


Q ss_pred             ccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccc-cCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccc
Q 037168           94 LGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLH-RNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVE  172 (466)
Q Consensus        94 ~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~  172 (466)
                      .......|.||||.|+..|+.+++++|++.+       ...+.+ +.+|.||||   .|++.|+.++++.|++ +|++++
T Consensus       104 ~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~-------~~~~~~~~~~G~T~L~---~A~~~g~~~~v~~Ll~-~gad~~  172 (221)
T d1iknd_         104 LKATNYNGHTCLHLASIHGYLGIVELLVSLG-------ADVNAQEPCNGRTALH---LAVDLQNPDLVSLLLK-CGADVN  172 (221)
T ss_dssp             GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-------CCTTCCCTTTCCCHHH---HHHHTTCHHHHHHHHT-TTCCSC
T ss_pred             ccccccccchhhhHHhhcCChhheeeecccC-------cccccccccCCCCccc---cccccccHHHHHHHHh-cCCccc
Confidence            4556678999999999999999999999883       344444 467999999   7779999999999998 899999


Q ss_pred             ccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          173 HIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       173 ~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      .+|.+|+||||+|+++++.+++++|++.+.+
T Consensus       173 ~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         173 RVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             CCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999999999999999999999998755

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.1e-24  Score=208.11  Aligned_cols=187  Identities=16%  Similarity=0.193  Sum_probs=127.2

Q ss_pred             hhhhhcc-CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCH-------HHHHHHHhccCCC
Q 037168           56 LDKMTRQ-NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKV-------DIFNFLAGKISGY  127 (466)
Q Consensus        56 ~~~~~~~-d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~-------~~v~~Ll~~~~~~  127 (466)
                      +.+++.. |.+|+||||+||..|+. +++++|+++ +++++.+|..|+||||.|+..++.       ++++++.      
T Consensus        96 ~~dvn~~~D~~G~T~LH~Aa~~g~~-~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~------  167 (301)
T d1sw6a_          96 QLNLNIPVDEHGNTPLHWLTSIANL-ELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY------  167 (301)
T ss_dssp             CCCSCSCCSTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG------
T ss_pred             CCCcCcCcCCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHh------
Confidence            4456655 89999999999999997 999999988 789999999999999999987752       4444443      


Q ss_pred             CCCCcccccccCCCCChhhHHHHHhhc-CcHH--------HHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHH
Q 037168          128 DHATRLPFLHRNDKTNVLHIAILSLHF-GCIE--------IVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVV  198 (466)
Q Consensus       128 ~~~~~~~~~~d~~g~TpLh~A~~a~~~-g~~~--------~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll  198 (466)
                          .....+|..|+||||+++..... +..+        +++.+++.........+..+.+++|.+...........+.
T Consensus       168 ----~~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T d1sw6a_         168 ----PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD  243 (301)
T ss_dssp             ----GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS
T ss_pred             ----hhhhhcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHh
Confidence                23567788999999977654432 2322        3345555455556666777888888887776655554332


Q ss_pred             hcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHH
Q 037168          199 QMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELF  274 (466)
Q Consensus       199 ~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~  274 (466)
                      .. ......+|.+|.+|+||||+|++.|+.++++.|                   +..+.+++.+|++|+||+|++
T Consensus       244 ~~-~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~L-------------------l~~GAd~~~~n~~G~Tpl~~A  299 (301)
T d1sw6a_         244 LK-WIIANMLNAQDSNGDTCLNIAARLGNISIVDAL-------------------LDYGADPFIANKSGLRPVDFG  299 (301)
T ss_dssp             HH-HHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGT
T ss_pred             hH-HHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCCHHHHc
Confidence            11 111233799999999999999999999999777                   345667899999999999976

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=6.4e-24  Score=173.57  Aligned_cols=108  Identities=14%  Similarity=0.088  Sum_probs=100.9

Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChH
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNI  181 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~  181 (466)
                      .|||++|++.|+.+++++|++.       |.+++.+|.+|+||||   .|+..|+.++++++++ .+.+++.+|..|+||
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~-------g~d~n~~~~~g~t~lh---~A~~~~~~~~~~~ll~-~g~din~~d~~g~tp   71 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAK-------GEDVNRTLEGGRKPLH---YAADCGQLEILEFLLL-KGADINAPDKHHITP   71 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTT-------TCCCCCCSSSSCCTTH---HHHHHSTTTHHHHHHH-SSCTTTCCSSSCSCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHh-------hhcccccccccccccc---cccccccccccccccc-ccceeeecccccccc
Confidence            4899999999999999999988       6788899999999999   6778899999999998 889999999999999


Q ss_pred             HHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168          182 LHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI  224 (466)
Q Consensus       182 Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~  224 (466)
                      ||+|+.+|+.+++++|+++|++    ++.+|.+|+||||+|..
T Consensus        72 Lh~A~~~~~~~~v~~Ll~~Gad----~~~~d~~G~t~l~~a~~  110 (118)
T d1myoa_          72 LLSAVYEGHVSCVKLLLSKGAD----KTVKGPDGLTALEATDN  110 (118)
T ss_dssp             HHHHHTTTCCHHHHHHHTTCCC----SSSSSSSTCCCCCTCSS
T ss_pred             hhhhhhcCchhhhhhhhccccc----ceeeCCCCCCHHHHHhH
Confidence            9999999999999999999998    99999999999999954

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.7e-23  Score=172.79  Aligned_cols=117  Identities=15%  Similarity=0.066  Sum_probs=62.7

Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC-h
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR-N  180 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~-t  180 (466)
                      .++||+|++.|+.+++++|+++       |.+++.+|.+|.||+|   .+ ..|+.++++.|++ .+.+++.+|..|. |
T Consensus         4 ~~~L~~Aa~~G~~~~v~~Ll~~-------gad~n~~~~~g~t~l~---~a-~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~   71 (125)
T d1bi7b_           4 ADWLATAAARGRVEEVRALLEA-------GANPNAPNSYGRRPIQ---VM-MMGSARVAELLLL-HGAEPNCADPATLTR   71 (125)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTT-------TCCTTCCCSSSCCTTT---SS-CTTCHHHHHHHHT-TTCCCCCCCTTTCCC
T ss_pred             hhHHHHHHHCCCHHHHHHHHHc-------CCcccccccccccccc---cc-ccccccccccccc-ccccccccccccccc
Confidence            3555555555555555555554       3445555555555555   22 2355555555555 4555555555443 3


Q ss_pred             HHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168          181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM  234 (466)
Q Consensus       181 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l  234 (466)
                      |||+|+++|+.+++++|+++|++    ++.+|.+|+||||+|+++|+.+++++|
T Consensus        72 ~L~~A~~~g~~~~v~~Ll~~ga~----~~~~d~~G~T~l~~A~~~g~~~~v~~L  121 (125)
T d1bi7b_          72 PVHDAAREGFLDTLVVLHRAGAR----LDVRDAWGRLPVDLAEELGHRDVARYL  121 (125)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHTCC----SSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred             ccccccccccccccccccccccc----cccccCCCCCHHHHHHHcCCHHHHHHH
Confidence            55555555555555555555555    555555555555555555555555444

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=9.6e-24  Score=172.48  Aligned_cols=105  Identities=20%  Similarity=0.176  Sum_probs=98.6

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHH
Q 037168           29 DTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRA  108 (466)
Q Consensus        29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A  108 (466)
                      +|||++|++.|+.++|+.|++     ++.+++.+|..|+||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~-----~g~d~n~~~~~g~t~lh~A~~~~~~-~~~~~ll~~-g~din~~d~~g~tpLh~A   75 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVA-----KGEDVNRTLEGGRKPLHYAADCGQL-EILEFLLLK-GADINAPDKHHITPLLSA   75 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHT-----TTCCCCCCSSSSCCTTHHHHHHSTT-THHHHHHHS-SCTTTCCSSSCSCHHHHH
T ss_pred             ChHHHHHHHCCCHHHHHHHHH-----hhhcccccccccccccccccccccc-ccccccccc-cceeeecccccccchhhh
Confidence            689999999999999999999     5567889999999999999999997 999999988 778999999999999999


Q ss_pred             HHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168          109 ARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI  147 (466)
Q Consensus       109 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~  147 (466)
                      +.+|+.+++++|+++       |++++.+|.+|+||||+
T Consensus        76 ~~~~~~~~v~~Ll~~-------Gad~~~~d~~G~t~l~~  107 (118)
T d1myoa_          76 VYEGHVSCVKLLLSK-------GADKTVKGPDGLTALEA  107 (118)
T ss_dssp             HTTTCCHHHHHHHTT-------CCCSSSSSSSTCCCCCT
T ss_pred             hhcCchhhhhhhhcc-------cccceeeCCCCCCHHHH
Confidence            999999999999998       77899999999999993

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.88  E-value=1.1e-24  Score=212.36  Aligned_cols=162  Identities=9%  Similarity=0.103  Sum_probs=125.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCC------CCchhhhhccCCCCChHHHHHHHcCCcHHHHHHH--HHhCCCcccCcCCCC
Q 037168           30 TVLHMATYTKKSDLVIKLLDELP------DQSLDKMTRQNKAGNTILHETATSNHALPVADKV--LRKAPGLLGMRNNNG  101 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~------~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~L--l~~~~~~~~~~d~~G  101 (466)
                      +.++.+...+..++.+.+.....      ......++.+|..|.||||+||+.|+. ++++.+  +...+++++.+|.+|
T Consensus        48 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~-~~~~~~~~L~~~~~~in~~~~~g  126 (346)
T d2ajaa1          48 IHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCS-SALDTLCLLLTSDEIVKVIQAEN  126 (346)
T ss_dssp             HHHCCCCSSHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTCCHHHHHHHHHHHCCH-HHHHHHTTC--CCSSCC--CHHH
T ss_pred             HHHHHHhhccHHHHHHHHHHcchhhccchhhhhhHHHhccCCCCcHHHHHHHhCCH-HHHHHHHHHHhCCCcccccCCCC
Confidence            34444444455666666654321      112456678889999999999999996 777764  444588999999999


Q ss_pred             ChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc--CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCc---cccccc
Q 037168          102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR--NDKTNVLHIAILSLHFGCIEIVKDILSVYPQA---VEHIDD  176 (466)
Q Consensus       102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d--~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~---~~~~d~  176 (466)
                      +||||+||++|+.++|++|++.       +++++..+  .+|+||||   .|+..|+.+++++|++ .+..   .+..+.
T Consensus       127 ~taL~~Aa~~G~~~~v~~Ll~~-------g~~~~~~~~~~~g~t~L~---~Aa~~g~~~iv~~Ll~-~~~~~~~~~~~~~  195 (346)
T d2ajaa1         127 YQAFRLAAENGHLHVLNRLCEL-------APTEIMAMIQAENYHAFR---LAAENGHLHVLNRLCE-LAPTEATAMIQAE  195 (346)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHS-------CTTTHHHHHSHHHHHHHH---HHHHTTCHHHHHHHHH-SCGGGHHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHc-------CCCccccccccCCCChhH---HHHHHhhHHHHHHHHH-cCCcccccccccC
Confidence            9999999999999999999998       55666665  46999999   7789999999999999 4433   345566


Q ss_pred             CCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          177 EGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       177 ~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      +|.||+|.|+.+|+.+++++|+++|++
T Consensus       196 ~~~t~l~~A~~~g~~~iv~~Ll~~ga~  222 (346)
T d2ajaa1         196 NYYAFRWAAVGRGHHNVINFLLDCPVM  222 (346)
T ss_dssp             HHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred             CCcchhhHHhhcCHHHHHHHHHhCCCC
Confidence            788899999999999999999999987

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.3e-23  Score=170.37  Aligned_cols=120  Identities=16%  Similarity=0.083  Sum_probs=81.9

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC-hHHH
Q 037168           28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE-TALL  106 (466)
Q Consensus        28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~-tpLh  106 (466)
                      +.++||+||+.|+.++|++|++     +|++++.+|..|.||||+|+ .|+. +++++|+++ +.+++.+|..|. ||||
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~-----~gad~n~~~~~g~t~l~~a~-~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~L~   74 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLE-----AGANPNAPNSYGRRPIQVMM-MGSA-RVAELLLLH-GAEPNCADPATLTRPVH   74 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHT-----TTCCTTCCCSSSCCTTTSSC-TTCH-HHHHHHHTT-TCCCCCCCTTTCCCHHH
T ss_pred             ChhHHHHHHHCCCHHHHHHHHH-----cCCccccccccccccccccc-cccc-ccccccccc-ccccccccccccccccc
Confidence            4567777777777777777777     44556677777777777654 4664 777777766 555676666654 4777


Q ss_pred             HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168          107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus       107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      +|++.|+.+++++|++.       +.+++.+|.+|+||||   .|++.|+.|++++|++
T Consensus        75 ~A~~~g~~~~v~~Ll~~-------ga~~~~~d~~G~T~l~---~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          75 DAAREGFLDTLVVLHRA-------GARLDVRDAWGRLPVD---LAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHTCHHHHHHHHHH-------TCCSSCCCTTCCCHHH---HHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccc-------ccccccccCCCCCHHH---HHHHcCCHHHHHHHHh
Confidence            77777777777777776       4566666777777777   5556677777776653

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=8e-23  Score=169.93  Aligned_cols=121  Identities=18%  Similarity=0.221  Sum_probs=102.0

Q ss_pred             cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168           30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA  109 (466)
Q Consensus        30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa  109 (466)
                      ++||.||..|+.++|+.|++     ++++++.+|.+|+||||+|+..|+. +++++|++. +.+++.+|.+|+||||+|+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~-----~g~d~n~~d~~g~t~Lh~A~~~~~~-~~~~~ll~~-g~~~~~~d~~g~tpLh~A~   75 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIY-----EVDDPSLPNDEGITALHNAVCAGHT-EIVKFLVQF-GVNVNAADSDGWTPLHCAA   75 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTS-----TTSSCCCCCTTSCCHHHHHHHHTCH-HHHHHHHHH-TCCTTCCCTTCCCHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHH-----cCCCccccccccccccccccccccc-ccccccccc-ccccccccccCcccccccc
Confidence            57899999999999999998     5567888999999999999999986 999999988 6778999999999999999


Q ss_pred             HcCCHHHHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168          110 RYGKVDIFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFGCIEIVKDILS  165 (466)
Q Consensus       110 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v~~Ll~  165 (466)
                      .+|+.+++++|+++       |++++..+. +|+||++++ .+...|+.|++++|++
T Consensus        76 ~~g~~~~v~~Ll~~-------ga~v~~~~~~~~~~~~~~~-~a~~~g~~eiv~~L~~  124 (130)
T d1ycsb1          76 SCNNVQVCKFLVES-------GAAVFAMTYSDMQTAADKC-EEMEEGYTQCSQFLYG  124 (130)
T ss_dssp             HTTCHHHHHHHHHT-------TCCTTCCCSSSCCCHHHHC-CSSSTTCCCHHHHHHH
T ss_pred             hhhHHHHHHHHHHc-------CCCcccccCCCCCCHHHHH-HHHHcChHHHHHHHHh
Confidence            99999999999988       566666654 588887743 3567788889888876

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-21  Score=162.96  Aligned_cols=120  Identities=14%  Similarity=0.125  Sum_probs=82.6

Q ss_pred             hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168           68 TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI  147 (466)
Q Consensus        68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~  147 (466)
                      ++||.||..|+. ++++.|+++ +++++.+|.+|+||||+|+..|+.+++++|++.       +.+++.+|.+|+|||| 
T Consensus         3 ~lL~~A~~~G~~-~~v~~Ll~~-g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~-------g~~~~~~d~~g~tpLh-   72 (130)
T d1ycsb1           3 ALLLDSSLEGEF-DLVQRIIYE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF-------GVNVNAADSDGWTPLH-   72 (130)
T ss_dssp             HHHHHHHHHTCH-HHHHHHTST-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-------TCCTTCCCTTCCCHHH-
T ss_pred             HHHHHHHHcCCH-HHHHHHHHc-CCCcccccccccccccccccccccccccccccc-------ccccccccccCccccc-
Confidence            467777777775 777777766 566777777777777777777777777777776       4566667777777777 


Q ss_pred             HHHHhhcCcHHHHHHHHHHCCCccccccc-CCChHHHHH--HHcCChhHHHHHHhc
Q 037168          148 AILSLHFGCIEIVKDILSVYPQAVEHIDD-EGRNILHVA--IKYRQLEIFERVVQM  200 (466)
Q Consensus       148 A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A--~~~~~~~iv~~Ll~~  200 (466)
                        .|+..|+.++++.|++ .|++++.++. .|+|+++++  +++|+.+++++|++.
T Consensus        73 --~A~~~g~~~~v~~Ll~-~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          73 --CAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             --HHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             --ccchhhHHHHHHHHHH-cCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence              5556777777777776 6666666553 466665554  455667777777654

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=4.4e-20  Score=157.52  Aligned_cols=123  Identities=14%  Similarity=0.113  Sum_probs=72.9

Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCc-hhhhhccCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168           32 LHMATYTKKSDLVIKLLDELPDQS-LDKMTRQNKAGNTILHETATS---NHALPVADKVLRKAPGLLGMRNNNGETALLR  107 (466)
Q Consensus        32 Lh~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~  107 (466)
                      |+.|++.++...+..++.++.+.. .......+..|+||||+|++.   |+. +++++|++. |.+++.+|.+|+||||+
T Consensus        10 L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~-~iv~~Ll~~-gadin~~d~~g~TpLh~   87 (154)
T d1dcqa1          10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL-HIVDFLVQN-SGNLDKQTGKGSTALHY   87 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTH-HHHHHHHHH-CSCTTCCCTTCCCHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCH-HHHHHHHHc-CCChhhhhhhhcccccc
Confidence            456667777777777776543321 111222355566666666653   332 666666666 45566666666666666


Q ss_pred             HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH
Q 037168          108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV  166 (466)
Q Consensus       108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~  166 (466)
                      |+..|+.+++++|+++       +++++.+|.+|+||||   .|++.|+.++++.|++.
T Consensus        88 A~~~~~~~~v~~Ll~~-------gad~~~~d~~g~tpL~---~A~~~~~~~i~~~L~~~  136 (154)
T d1dcqa1          88 CCLTDNAECLKLLLRG-------KASIEIANESGETPLD---IAKRLKHEHCEELLTQA  136 (154)
T ss_dssp             HHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHH
T ss_pred             cccccccccccccccc-------CccccccCCCCCCHHH---HHHHcCCHHHHHHHHHh
Confidence            6666666666666665       4455566666666666   44455666666666653

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=4.5e-20  Score=157.42  Aligned_cols=122  Identities=19%  Similarity=0.111  Sum_probs=104.2

Q ss_pred             HHHHHHHcCCcHHHHHHHHHhCCCcccC------cCCCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCcccccccC
Q 037168           69 ILHETATSNHALPVADKVLRKAPGLLGM------RNNNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLPFLHRN  139 (466)
Q Consensus        69 pLh~Aa~~g~~~~~v~~Ll~~~~~~~~~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~d~  139 (466)
                      .|+.|++.++. ..+..++.. +.+++.      .+..|+||||+|++.   |+.+++++|+++       |.+++.+|.
T Consensus         9 ~L~~Av~~~dl-~~l~~~~~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------gadin~~d~   79 (154)
T d1dcqa1           9 SLCEAVKTRDI-FGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SGNLDKQTG   79 (154)
T ss_dssp             HHHHHHHTTCH-HHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CSCTTCCCT
T ss_pred             HHHHHHHhCCH-HHHHHHHHc-CCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHc-------CCChhhhhh
Confidence            45578888887 666677766 433443      378899999999975   678999999998       678899999


Q ss_pred             CCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168          140 DKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP  203 (466)
Q Consensus       140 ~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~  203 (466)
                      +|+||||   .|+..|+.++++.|++ .+++++.+|++|+||||+|+++|+.+++++|++.++.
T Consensus        80 ~g~TpLh---~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          80 KGSTALH---YCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             TCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             hhccccc---cccccccccccccccc-cCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            9999999   7778999999999998 7999999999999999999999999999999987654