Citrus Sinensis ID: 037207

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850------1860------1870------1880------1890------1900------1910------1920------1930------1940------1950------1960------1970------1980------199
Protein Sequence
MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELTGQHPHGLNQDSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Secondary Structure (PSIPRED)
cccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccHHHccccccccccccccccccccccccccccccccEEEEEEccEEEEcccccccEEEEEEHHHHHHHHHHHHcccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEccccccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccEEEEcHHHHHHHHcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccHHHHHHHHHccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccEEcccccHHHHHcccccEccccccccccccccccccccccccEEEEEEcccEEEEEEccccccEEEEEHHHHHHHHHHHHHcccHHHcccccEEEEEEEEcccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccccEEEEEccHHHHHHHHccccccccHHHHHHHHHHHHcccccEcEEHHHHHHHHHHHHcHHHHHHHHHHHHccccEEcccccccccccccccccccccccccHHHcccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccHHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHccccccHHEccccHHHccccEEEEEEHHHHHHHHHHHHHHHccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcHccHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHEEEEHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccEEEcccccccEccccccccccccHHHHHccccccccccccccccccEEEccccccccccccccccHHHHHHccccccEEEEccccccccccccHHccccccccHHHHHccccHHccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mlaklspwcivyptlvdvnayeerpseELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLastsrkpetpheiwfHEEFGEQLKSAILnfktppasaaalgdvwrpfDNIAASLAShqrkssvslsevapqlsllsssdvpmpgfekqvatsesdggltATLRGIVTIASFSEEVSIlstktkpkKLVILGQMLLQAVNSFlrsspatrshslgiryysvtpisgraglIQWVDNVISIYSVFKSWQHRAQLAQFSaigagnakssvpppvprpsdmfygkIIPAlkekgirrvisrrdwphdvKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILglgdrhldnilldfssgdivhidynvcfdkgqrlkvpeivpfRLTQTIEAALGltgiegtfRANCEAVVSVLRKNKDILLMLLEVFvwdpliewtrgdfhddaaiggeerKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCiklsgsmdafsLTSAVLVAgvpfsivpeptqvqchdiDKDVSQLIAELDHGLSSVFIALQAYSLALQRilplnyltttaVHGWAQVLQLsanapsvdILSLARRQATELIVRIhgdnhdsikqnHDDLRLKVEKYGVEIEKVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAGLvrkedvsssyqsgqlkndgrkdaglrgkqdenkEKLLSVLNVAVTHLYdevkcrvldifsdsaggikgnnrmqldfgTLFCEFDEQVEKCILVAGFVNELWQSIgrdmydndadiecpnyhfernwaSIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFqsvisaeefrephiLRSKALLAILVKPFMELESVDKTLASFCEsvgsipygtpkladlinsGRSISECIWnfgslsnghsfFIWKMGIIDSFLDSCVHDVAAsvdqnlgfDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKEltaddakkdtGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWmhdatltpsynsritfqkyfssdddiypiilnlsrpkLLETLQSSVTKIARSVESLQACERSSLTAEGQLERamgwacggpnssaagnsstktsgippefhDHLMRRRQLLWEAREKASKIVNICMSVLdfeasrdgvfrtpgevyparvgvdARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAksasgdlqstvlTMRDCAYEASAALTAFGRVSRVHtaltsesgsMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSEretkmevspihgqAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEglgesqevksqgvslsrsdltaadssqfdekgreafsgsdsgsikddflgvsgislqdkgwisppdsiyssssesaitsgeaslpdssnnpveltgqhphglnqdsgqsvskrtevnntdsgsvkftvdepieyfkaqesptgeaVSVAVgssqplgnnsevkfgvKDEVSSVNkvgieeennedhvpnthtvsrvargkNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNmyegwtpwi
Flexible Loop (DISEMBL)
mlaklspwcivyPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARiaenatlsqsekkKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVAtsesdgglTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIpalkekgirrvisrrdwphdvKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIhgdnhdsikqnhddlRLKVEKYGVEIEKVEKECAELvnsigseteskaKDRFLLAFMKYMKSAGlvrkedvsssyqsgqlkndgrkdaglrgkqdenkeklLSVLNVAVTHLYDEVKCRVLDIFSdsaggikgnnrMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQSVisaeefrephiLRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTestkeltaddakkdtGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSeretkmevspiHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEGLGESQEVKSQGvslsrsdltaadssqfdekgreafsgsdsgsiKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELTGQHPhglnqdsgqsvskrtevnntdsgsvkftVDEPIEYFKAQESPTGEAVSVAVGSsqplgnnsevkfgvkDEVSSVNKVgieeennedhvpnthtvsrvargknayAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Low Complexity Region (SEG)
MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKssvpppvprpsDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTleqlveveleRASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWeeaeelasqeeaCKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDTGAVRRVQLMLAEYCNAHETaraarsaasLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAEGQLERAMGWACggpnssaagnssTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQllkpllpslmssVKGLYSMLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIKDDFLGVSGISLQDKGWIsppdsiyssssesaitsgeasLPDSSNNPVELTGQHPHGLNQDSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Disordered region (IsUnstruct)
****LSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARI****************AKYSAMMAPIVVALER************HEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAA*********************************************LTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIG*****************MFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHE*****MVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAELVNSI*********DRFLLAFMKYMKSAGL***********************************LLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKG**********************************************************QSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKL*****************AVRRVQLMLAEYCNAHETA************QVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKI******************************************************LMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQS***AASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDV****************VSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNL****************************************************FLGVSGISL****W*************************************************************************************************************************************RVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPW*
Disordered Region (DISOPRED)
MLAKLSPWCIVYPTLV*****************GCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERR*********TPHEIWFHEEFGEQLKSAILNFKTPPAS*AALGDVWRPFDNIA*****************APQLSLLSSSDVPMPGFEKQVATSESD**LTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQ**************PPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE*******************************************************LALERFADVLSQYELASALFYRADQERSN**************************************VVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELI***********KQNHDDLRLKVEKYGVEIEKV*****************KAKDRFLLAFMK************************DGRKDAGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFS**AGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMY*********NYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALE**********************EACKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQS***********ILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLAD*****RSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKK******************AVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYN*************DIYPIILNLSRPKLLETLQSSVT**************************MGWACGGP***************PPEFHDHLMRRRQ*****REKASKIVNICMSVLDFEASRDGVFR***************SWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNE******************VLTMRDCAYEASAALTAFGRVSR**TALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSD*****************QAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLAR**SL***********************************************************GVSGISLQD**************************************************************************************************************************************************ISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Disordered Region (DISEMBL)
MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERR*********TPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASL***************PQLSLLSSSDVPMPGFEK********GGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAG***********************AGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSW*********EEACKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAEGQLERAMGWACGG*************SGIPPEFHDHLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEGLG*************************************SGSIKDDFLGVSGISLQDKGWISPPD***********************NPVELTGQHPH*****************NTDSGSVKFTVDEPIEYFKAQE***********GSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Disordered Region (DISPRO)
**AKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEK*************TLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD************************ASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAGLV******SS**S**LKNDGRKDAGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAEGQLERAMGWACGG**************GIPPEFHDHLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPG*******GVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEGL******************************************KDDFLGVSGISLQDKGWISPPDSIYSS************LP**********************************DSGSVKFTVDEPIEYFKAQESPTGEAVS******************************************THTVSRVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWxxxxxxxxxxxxxxxxxxxxxAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNxxxxxxxxxxxxxxxxxxxxxxxxxxxxIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWEExxxxxxxxxxxxxxxxxxxxxWNQRDMRSSSLMKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELTGQHPHGLNQDSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1989	2.2.26 [Sep-21-2011]
Q8BKX6	3658	Serine/threonine-protein	yes	no	0.261	0.142	0.389	1e-116
Q96Q15	3661	Serine/threonine-protein	yes	no	0.261	0.142	0.389	1e-116
Q70PP2	3218	Serine/threonine-protein	yes	no	0.243	0.150	0.326	1e-79
Q553E9	2344	Probable serine/threonine	yes	no	0.231	0.196	0.326	3e-77
Q61CW2	2313	Serine/threonine-protein	N/A	no	0.250	0.215	0.315	1e-75
O01510	2322	Serine/threonine-protein	yes	no	0.247	0.212	0.311	4e-73
P32600	2474	Serine/threonine-protein	yes	no	0.228	0.183	0.276	1e-44
Q9FR53	2481	Serine/threonine-protein	yes	no	0.221	0.177	0.285	3e-44
Q86C65	2380	Target of rapamycin OS=Di	no	no	0.218	0.182	0.277	2e-43
Q0DJS1	2465	Serine/threonine-protein	no	no	0.222	0.179	0.275	2e-43

>sp|Q8BKX6|SMG1_MOUSE Serine/threonine-protein kinase SMG1 OS=Mus musculus GN=Smg1 PE=1 SV=3

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/580 (38%), Positives = 337/580 (58%), Gaps = 60/580 (10%)

Query: 41   PRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSE 100
            P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+  N TL + E
Sbjct: 1940 PTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQNNNTLRKEE 1999

Query: 101  KKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPAS 160
            K  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ + +A+   KTP ++
Sbjct: 2000 KIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIDNALEKLKTP-SN 2058

Query: 161  AAALGDVWRPFDNIAASLASHQRKSS---VSLSEVAPQLSLLSSSDVPMPGFEKQVATSE 217
             A  G  W PF  I  SL    +K +   + L E++P L+ ++++++ +PG         
Sbjct: 2059 PAKPGSSWIPFKEIMLSLQQRAQKRASYILRLDEISPWLAAMTNTEIALPG--------- 2109

Query: 218  SDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILG---------------------- 255
                   + R  VTI S    ++IL TKTKPKKL+ LG                      
Sbjct: 2110 -----EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERI 2164

Query: 256  QMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQ 315
               L  VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R  
Sbjct: 2165 MQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQRE- 2223

Query: 316  LAQFSAIGAGNAKSSVPPP-----VPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKR 370
                +A+ A  A+ S   P     VPRPS+++Y KI PALK  G+   +SRRDWP  V +
Sbjct: 2224 ----AALQAQKAQDSYQTPQNPSIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMK 2279

Query: 371  KVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNI 430
             VL +LM+  P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+
Sbjct: 2280 AVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNV 2339

Query: 431  LLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVS 490
            L+D ++G++VHIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ 
Sbjct: 2340 LIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLH 2399

Query: 491  VLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAI----GGEE------RKGMELAVSLS 540
            ++R+ ++ LL LLE FV+DPL++WT G     A      GG++      ++ ME  ++ S
Sbjct: 2400 IMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRS 2459

Query: 541  LFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQ 580
            LF+SRV EI+V   ++ D +L  LP ++ +L+ +  +  Q
Sbjct: 2460 LFSSRVAEIKVNWFKNRDEMLVVLPKLDSSLDEYLSLQEQ 2499

Serine/threonine protein kinase involved in both mRNA surveillance and genotoxic stress response pathways. Recognizes the substrate consensus sequence [ST]-Q. Plays a central role in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by phosphorylating UPF1/RENT1. Recruited by release factors to stalled ribosomes together with SMG8 and SMG9 (forming the SMG1C protein kinase complex), and UPF1 to form the transient SURF (SMG1-UPF1-eRF1-eRF3) complex. In EJC-dependent NMD, the SURF complex associates with the exon junction complex (EJC) through UPF2 and allows the formation of an UPF1-UPF2-UPF3 surveillance complex which is believed to activate NMD. Also acts as a genotoxic stress-activated protein kinase that displays some functional overlap with ATM. Can phosphorylate p53/TP53 and is required for optimal p53/TP53 activation after cellular exposure to genotoxic stress. Its depletion leads to spontaneous DNA damage and increased sensitivity to ionizing radiation (IR). May activate PRKCI but not PRKCZ.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1 SV=3

 Score =  421 bits (1081), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/580 (38%), Positives = 337/580 (58%), Gaps = 60/580 (10%)

Query: 41   PRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSE 100
            P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+  N TL + E
Sbjct: 1942 PTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQNNNTLRKEE 2001

Query: 101  KKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPAS 160
            K  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+   KTP  +
Sbjct: 2002 KIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENALEKLKTP-LN 2060

Query: 161  AAALGDVWRPFDNIAASLASHQRKSS---VSLSEVAPQLSLLSSSDVPMPGFEKQVATSE 217
             A  G  W PF  I  SL    +K +   + L E++P L+ ++++++ +PG         
Sbjct: 2061 PAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG--------- 2111

Query: 218  SDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILG---------------------- 255
                   + R  VTI S    ++IL TKTKPKKL+ LG                      
Sbjct: 2112 -----EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERI 2166

Query: 256  QMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQ 315
               L  VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R  
Sbjct: 2167 MQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQRE- 2225

Query: 316  LAQFSAIGAGNAKSSVPPP-----VPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKR 370
                +A+ A  A+ S   P     VPRPS+++Y KI PALK  G+   +SRRDWP  V +
Sbjct: 2226 ----AALQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMK 2281

Query: 371  KVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNI 430
             VL +LM+  P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+
Sbjct: 2282 AVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNV 2341

Query: 431  LLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVS 490
            L+D ++G++VHIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ 
Sbjct: 2342 LIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLH 2401

Query: 491  VLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAI----GGEE------RKGMELAVSLS 540
            ++R+ ++ LL LLE FV+DPL++WT G     A      GG++      ++ ME  ++ S
Sbjct: 2402 IMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRS 2461

Query: 541  LFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQ 580
            LF+SRV EI+V   ++ D +L  LP ++ +L+ +  +  Q
Sbjct: 2462 LFSSRVAEIKVNWFKNRDEMLVVLPKLDGSLDEYLSLQEQ 2501

Serine/threonine protein kinase involved in both mRNA surveillance and genotoxic stress response pathways. Recognizes the substrate consensus sequence [ST]-Q. Plays a central role in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by phosphorylating UPF1/RENT1. Recruited by release factors to stalled ribosomes together with SMG8 and SMG9 (forming the SMG1C protein kinase complex), and UPF1 to form the transient SURF (SMG1-UPF1-eRF1-eRF3) complex. In EJC-dependent NMD, the SURF complex associates with the exon junction complex (EJC) through UPF2 and allows the formation of an UPF1-UPF2-UPF3 surveillance complex which is believed to activate NMD. Also acts as a genotoxic stress-activated protein kinase that displays some functional overlap with ATM. Can phosphorylate p53/TP53 and is required for optimal p53/TP53 activation after cellular exposure to genotoxic stress. Its depletion leads to spontaneous DNA damage and increased sensitivity to ionizing radiation (IR). May activate PRKCI but not PRKCZ.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q70PP2|SMG1_DROME Serine/threonine-protein kinase Smg1 OS=Drosophila melanogaster GN=Smg1 PE=1 SV=2

 Score =  300 bits (767), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 182/558 (32%), Positives = 290/558 (51%), Gaps = 74/558 (13%)

Query: 2    LAKLSPWCIVYPTLVDVNAYEE---------RPSEE----LQHILGCLRELYPRLIQDVE 48
            LAK  P  +++P +V  N  ++         RP+ E      ++LG L +  P  +Q V+
Sbjct: 1674 LAKSRPQLVIFPAVVGANREQQDATAPPATARPTTEDACCYGYLLGELSKQAPEAVQHVK 1733

Query: 49   LMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAK 108
            LM+ EL  + +LW+E W+ +L  ++   + R++ L          AT  + +  +    +
Sbjct: 1734 LMVKELRRVCLLWDEYWIHSLAHIYNTYVSRVSAL----------ATDFRPDDHEGKNNR 1783

Query: 109  YSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI--LNFKTPPASAAALGD 166
            ++     ++  LE  +A TSR PET +E  F + F   ++  +  L  +  P       +
Sbjct: 1784 FNVWRPQLLADLEALVAVTSRPPETTYERSFRKRFDAPIRLTVDALRHRRYP-------E 1836

Query: 167  VWRPFDNIAASLASHQRK---SSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLT 223
             W     +   L S+  +   S++ +  ++P L  +    + MPG +      +      
Sbjct: 1837 AWDKLKQLYHILQSNMIRGSGSTLKMQSISPVLCGIGRMRISMPGLDAHGPDGDQ----- 1891

Query: 224  ATLRGIVTIASFSEEVSILSTKTKPKKLVILGQ---------------MLLQAVNSFLRS 268
                  V I S    V +L TKTKPKK+   G                 L + +  FL  
Sbjct: 1892 ------VYIESVESSVCVLPTKTKPKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFLSI 1945

Query: 269  SPA---TRSHSLG-----IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
            S A    RS + G       +YSV P+  ++GLI WVD V  +++++K WQ R   +Q +
Sbjct: 1946 SNAIMACRSDAPGNGCYRAHHYSVIPLGPQSGLISWVDGVTPVFALYKKWQQRR--SQVA 2003

Query: 321  AIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                  A ++VP    R +D+FY K+ P L +  ++    RR WP  V  +VL +L +E 
Sbjct: 2004 GNAGAGAVANVPR---RFTDLFYNKLSPLLAKHNMQVSDPRRQWPISVLLQVLDELSQET 2060

Query: 381  PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
            P  LL +E+WC +     +   ++R+   ++ MSM+G+++GLGDRHLDN+L++  SGDIV
Sbjct: 2061 PNDLLARELWCQAGNAAEWRQSVRRFVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIV 2120

Query: 441  HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
            HIDYNVCF+KG+ L++PE VPFRLTQ +  A+G+TGIEG FR  CE V+ V+RK ++ LL
Sbjct: 2121 HIDYNVCFEKGRTLRIPEKVPFRLTQNLVQAMGITGIEGPFRLGCEYVLKVMRKERETLL 2180

Query: 501  MLLEVFVWDPLIEWTRGD 518
             LLE FV+DPL++WT  D
Sbjct: 2181 TLLEAFVYDPLVDWTTND 2198

Serine/threonine protein kinase involved in mRNA surveillance. Recognizes the substrate consensus sequence [ST]-Q. Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons, probably by phosphorylating Upf1.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q553E9|SMG1_DICDI Probable serine/threonine-protein kinase smg1 OS=Dictyostelium discoideum GN=smg1 PE=3 SV=1

 Score =  291 bits (746), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 186/570 (32%), Positives = 277/570 (48%), Gaps = 109/570 (19%)

Query: 43   LIQDVELMINELGNLTVLWEELWLSTLQDLHADVM---RRINVLKEEAARIAENATLSQS 99
            L+++ E +I +LG LT LW++ W   ++ +   V    ++ N   ++     +N T+ + 
Sbjct: 1602 LVKETETLIYQLGKLTTLWDDNWQYFIEQIQGWVYINTKQWNDDYQQLKATIKNPTILKH 1661

Query: 100  EKKKINAAKYSAMMAPIVVALERRLASTSRKP-ETPHEIWFHEEFGEQLKSAILNF--KT 156
              KK N      ++ PI   L+R  A+T     +TPHE WF +   E +   I  F  + 
Sbjct: 1662 TLKKKN----QELLQPIYEKLKRLTAATVLSVCKTPHEKWFTKCHFETINKTIRAFEKQN 1717

Query: 157  PPASAAALGDVWRPFDNIAASLASHQ--RKSSVSLSEVAPQLSLLSSSDVPMPGFE---- 210
             P S         PFD +   +A  Q  R  S+SLS V P L+L   +   MPG +    
Sbjct: 1718 KPTS---------PFDVLHDLIAEFQQYRLISLSLSSVNPSLALFRPTITQMPGTDLNYF 1768

Query: 211  -----------------KQVATSESDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVI 253
                                  S S G L   ++  VTI      + +L TKTKPKK+ +
Sbjct: 1769 NINHIHHHHHHHNHHGNNNNQHSTSSGNLP--IQNQVTIQLIKPTIYLLPTKTKPKKMAM 1826

Query: 254  LG----------------------QMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRA 291
            LG                        LL  V+  L +        L  R YSV P+S  +
Sbjct: 1827 LGSDGNLYYYLLKGREDLHLDERIMQLLNVVDQLLMNDKKPTLKLLRTRNYSVIPLSQSS 1886

Query: 292  GLIQWVDNVISIYSVFKSWQHRAQLAQ--------------------------------- 318
            GLIQWV+  + ++S++K+W    Q+ +                                 
Sbjct: 1887 GLIQWVEGAVPLFSIYKNWYKNDQVYKQQQQQQQQLQQQQQQQQQQQQQQPQPQQQPQQQ 1946

Query: 319  ---------FSAIGAGNAKSSVPPP-VPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDV 368
                          +    + V  P + RP D+FY KI P L++ G+  +  R +WP ++
Sbjct: 1947 PQQQPQQQPQPQQNSTTTSNIVNKPIIARPVDIFYAKITPLLEKAGLNFMTPRSEWPKEI 2006

Query: 369  KRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLD 428
              +VL +LM+E P+ +L +E+W +S       LK + YS S+A MS++G+++GLGDRHLD
Sbjct: 2007 LIQVLNELMQETPKWILQRELWFSSSSSSELFLKTQSYSRSLALMSVIGYMIGLGDRHLD 2066

Query: 429  NILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAV 488
            NILLD  +G+IVHIDYN+CF+KG  LK+PE VPFR+TQ  E ALGLTG++GTFR     +
Sbjct: 2067 NILLDLKTGEIVHIDYNICFEKGAELKIPERVPFRMTQIFEYALGLTGVQGTFRETSIQI 2126

Query: 489  VSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            + +LRKNKDILL LLE F++DPL +W   +
Sbjct: 2127 MHLLRKNKDILLNLLETFIYDPLFDWKHSN 2156

Serine/threonine protein kinase involved in mRNA surveillance. Recognizes the substrate consensus sequence [ST]-Q. Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by phosphorylating upf1.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61CW2|SMG1_CAEBR Serine/threonine-protein kinase smg-1 OS=Caenorhabditis briggsae GN=smg-1 PE=3 SV=3

 Score =  286 bits (732), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 180/570 (31%), Positives = 288/570 (50%), Gaps = 72/570 (12%)

Query: 17   DVNAYEERPSEELQHILGCLREL-------YPRLIQDVELMINELGNLTVLWEELWLSTL 69
            +V+  EE+ +++   +  C  +L       YP L++DV   + EL  + +L EE W   L
Sbjct: 1531 EVSDLEEQQNDDRNRVRACCEQLETKMAQSYPNLVRDVRQFVAELERINLLNEEKWSVVL 1590

Query: 70   QDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLAST-S 128
              +  ++ +R+ ++K E A+   +  L   +K +I + K   +   I   L+     T  
Sbjct: 1591 GTMEHEMEKRLALIKAENAKTDFSMHLMPKQKDEIISKKTKLLTRQIFDVLDELYEKTIV 1650

Query: 129  RKPETPHEIWFHEEFGEQLKSAIL-----NFKTPPASAAALGDVWRPFDNIAASLASHQR 183
             +PET +E  F   F E L  A        + +P AS       W PF N+ ++ A    
Sbjct: 1651 AQPETENEKEFFNTFSEMLTKAHTESKNNRYNSPEAS-------WAPFKNLVSNFAHRTN 1703

Query: 184  KS---SVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            K    +   ++++  L+ L  S VPMPG E            +     +V+IA  ++ V+
Sbjct: 1704 KKGMQTFQTADISQYLATLGKSCVPMPGQE------------SVEFDRVVSIARVADNVT 1751

Query: 241  ILSTKTKPKKLVILGQ---------------MLLQAVNSFLR------SSPATRSHSLG- 278
            IL TKT+PKKL  +G                 L + V  FLR       S   +S  +  
Sbjct: 1752 ILPTKTRPKKLGFIGSDGKQLAFLFKGREDLHLDERVMQFLRLCNVMLQSEKGKSRQIAE 1811

Query: 279  --IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP 336
                +Y+V P+  R+GLI+WV+    I+ +++ WQ + +  +     A        P + 
Sbjct: 1812 YQAHHYAVIPLGPRSGLIKWVEGATPIFHIYRKWQMKEKALK----QATKKNGETVPEIE 1867

Query: 337  RPSDMFYGKIIPALKEKGIRRVIS--RRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASE 394
            +P++M++  I  A     I  +I+  R  WP  +  +V   L  + P  L+ +EIW  + 
Sbjct: 1868 KPTNMYHNMIRQAFTAHNIDAIIASDRSKWPAQILEEVFDGLCSKTPTDLISREIWMRAN 1927

Query: 395  GFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRL 454
               A+    KRY+ S+A MSMVG +LGLGDRHLDN+L+D   G +VHIDYN+CFDKG+ L
Sbjct: 1928 DSTAWWAVTKRYARSLAVMSMVGSVLGLGDRHLDNLLVDLKYGHVVHIDYNICFDKGKIL 1987

Query: 455  KVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEW 514
            ++PE VPFRL++ +  ALG + + GTFR +C  V+S LR    +L MLL+ FV+DPL++W
Sbjct: 1988 RIPETVPFRLSRNMRHALGPSDMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDW 2047

Query: 515  TRGDFHDDAAIGGEERKGMELAVSLSLFAS 544
            T    HD+ +  G    G+ LA+ L+++ S
Sbjct: 2048 TS---HDNISTSG----GVSLALQLAVYGS 2070

Serine/threonine protein kinase involved in mRNA surveillance. Recognizes the substrate consensus sequence [ST]-Q. Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by phosphorylating smg-2.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O01510|SMG1_CAEEL Serine/threonine-protein kinase smg-1 OS=Caenorhabditis elegans GN=smg-1 PE=1 SV=3

 Score =  278 bits (710), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 176/565 (31%), Positives = 282/565 (49%), Gaps = 72/565 (12%)

Query: 22   EERPSEELQHILGCLREL-------YPRLIQDVELMINELGNLTVLWEELWLSTLQDLHA 74
            EE+ +++   +  C  +L       YP L++DV   + EL  + +L EE W   +  +  
Sbjct: 1544 EEQQNDDRNRVRACCEKLETNMSQSYPNLVKDVRQFVAELERINLLNEEKWSVVMGTMEH 1603

Query: 75   DVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTS-RKPET 133
            ++ +R+++++ E A+      L+ S K  I   +   +   I   L+     T    P++
Sbjct: 1604 EMEKRLSLIRTENAKTESALHLTASVKNDIIVKRTQLLTRQIFDVLDELYQQTVIEPPKS 1663

Query: 134  PHEIWFHEEFGEQLKSAI----LNFKTPPASAAALGDVWRPFDNIAASLASHQRKSSVSL 189
             +E  F   F E L +A     ++  T P  +      W PF N+ A+      K  +  
Sbjct: 1664 KNEEEFVTAFAEVLTNAFQESRISRTTSPEKS------WIPFKNLIANFVHRNSKKGMQT 1717

Query: 190  SE---VAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSILSTKT 246
             E   ++P L+ LS+S VPMPG E            +     +V+I+  + +V+IL TKT
Sbjct: 1718 FETEDISPYLASLSNSCVPMPGQE------------SVEFDRVVSISRVARQVTILPTKT 1765

Query: 247  KPKKLVILGQ---------------MLLQAVNSFLRS-----SPATRSHSLGI-----RY 281
            +PKKL  +G                 L + V  FLR       P    H   +      +
Sbjct: 1766 RPKKLGFVGSDGKQVAFLFKGREDLHLDERVMQFLRLCNVMLQPGKGKHRQSVAAYQAHH 1825

Query: 282  YSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDM 341
            Y+V P+  R+GLI+WV+    ++ +++ WQ + +  +     A        P + RPS+M
Sbjct: 1826 YAVIPLGPRSGLIKWVEGATPMFHIYRKWQMKEKALK----QATKKNGETVPEIERPSNM 1881

Query: 342  FYGKIIPALKEKGIRRVIS--RRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAF 399
            ++  I  A  +  I   I+  R  WP ++  +V   L  + P  L+ +E+W  +     +
Sbjct: 1882 YHNMIRLAFADHKIDSSITSDRSKWPAEILEEVFESLTAKTPTDLISRELWMRANDATTW 1941

Query: 400  SLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEI 459
                KRYS S+A MSMVG +LGLGDRHLDN+L+D   G +VHIDYN+CFDKG+ L++PE 
Sbjct: 1942 WSVTKRYSRSLAVMSMVGSVLGLGDRHLDNLLVDLKWGHVVHIDYNICFDKGKNLRIPET 2001

Query: 460  VPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDF 519
            VPFRLT+ +  ALG + + GTFR +C  V+S LR    +L MLL+ FV+DPL++WT    
Sbjct: 2002 VPFRLTRNMRHALGPSEMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDWTS--- 2058

Query: 520  HDDAAIGGEERKGMELAVSLSLFAS 544
            H+  A       G+ LA+ L+++ S
Sbjct: 2059 HEHTATS-----GVSLALQLAVYGS 2078

Serine/threonine protein kinase involved in mRNA surveillance. Recognizes the substrate consensus sequence [ST]-Q. Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons by phosphorylating smg-2.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P32600|TOR2_YEAST Serine/threonine-protein kinase TOR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOR2 PE=1 SV=3

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 244/565 (43%), Gaps = 110/565 (19%)

Query: 3    AKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWE 62
             K  P  +VYP +V + +      +    I+  +R   P L+   EL+ +EL  + VLW 
Sbjct: 1905 GKAHPQALVYPLMVAIKSESLSRQKAALSIIEKMRIHSPVLVDQAELVSHELIRMAVLWH 1964

Query: 63   ELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALER 122
            E W   L D                   A      +   +K+ AA     + P+   L+R
Sbjct: 1965 EQWYEGLDD-------------------ASRQFFGEHNTEKMFAA-----LEPLYEMLKR 2000

Query: 123  RLASTSRKPETPHEIWFHEEFGEQLKSA---ILNFKTPPASAAALGDVWRPFDNIAASLA 179
                    PET  EI F   FG  L  A   ++N+K      + L   W  + N+   + 
Sbjct: 2001 -------GPETLREISFQNSFGRDLNDAYEWLMNYKKS-KDVSNLNQAWDIYYNVFRKIG 2052

Query: 180  SH-QRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEE 238
                +  ++ L  V+P+L  LS+ D+     E  V  + + GG     + IV I+ F   
Sbjct: 2053 KQLPQLQTLELQHVSPKL--LSAHDL-----ELAVPGTRASGG-----KPIVKISKFEPV 2100

Query: 239  VSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHS 276
             S++S+K +P+K  I G                        L   VN+ L++        
Sbjct: 2101 FSVISSKQRPRKFCIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLLQNDAECFRRH 2160

Query: 277  LGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP 336
            L I+ Y   P+S ++GL+ WV N  + + + +  +HR                       
Sbjct: 2161 LDIQQYPAIPLSPKSGLLGWVPNSDTFHVLIR--EHRE---------------------- 2196

Query: 337  RPSDMFYGKIIPALKEKGIRRVISRRDWPHDV---KRKVLLDLMKEVPRQLLHQEIWCAS 393
                    K IP   E  +   ++  D+ +     K +V    +     Q L++ +W  S
Sbjct: 2197 -------AKKIPLNIEHWVMLQMAP-DYDNLTLLQKVEVFTYALNNTEGQDLYKVLWLKS 2248

Query: 394  EGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG-Q 452
               + +  +   Y+ S+A MSM G+ILGLGDRH  N++LD  +G ++HID+  CF+    
Sbjct: 2249 RSSETWLERRTTYTRSLAVMSMTGYILGLGDRHPSNLMLDRITGKVIHIDFGDCFEAAIL 2308

Query: 453  RLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLI 512
            R K PE VPFRLT+ +  A+ ++GIEG+FR  CE V+ VLR NK  L+ +LE F +DPLI
Sbjct: 2309 REKFPEKVPFRLTRMLTYAMEVSGIEGSFRITCENVMKVLRDNKGSLMAILEAFAFDPLI 2368

Query: 513  EWTRGDFHDDAAIGGEERKGMELAV 537
             W      D      EE  G++L V
Sbjct: 2369 NWG----FDLPTKKIEEETGIQLPV 2389

Phosphatidylinositol 3-kinase homolog, component of both TORC1 and TORC2. TORC1 regulates multiple cellular processes to control cell growth in response to environmental signals. Nutrient limitation and environmental stress signals cause inactivation of TORC1. Active TORC1 positively controls ribosome biogenesis via control of rRNA, ribosomal protein and tRNA gene expression, and rRNA processing. TORC1 positively controls protein biosynthesis by regulation of mRNA stability, translation initiation factor activity, and high-affinity amino acid permeases that serve to provide amino acids for use by the translation machinery. TORC1 also promotes growth by sequestering a number of nutrient and general stress-responsive transcription factors in the cytoplasm. TORC1 negatively controls macroautophagy, a process to recycle surplus cytoplasmic mass under nutrient starvation conditions. TORC1 controls many of these processes via TIP41-TAP42-mediated inhibition of the type 2A-related phosphatases PP2A and SIT4. TORC2 regulates cell cycle-dependent polarization of the actin-cytoskeleton, cell wall integrity, and receptor endocytosis. TORC2 controls polarity of the actin cytoskeleton, which is required for orienting the secretory pathway toward discrete growth sites, via the RHO1/PKC1/MAPK cell integrity pathway by activating the RHO1 guanine nucleotide exchange factor ROM2. TORC2 phosphorylates the AGC kinase YPK2, an upstream effector of the cell integrity pathway. TORC2 negatively regulates calcineurin-dependent stress signaling via phosphorylation of its effector SLM1-SLM2.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FR53|TOR_ARATH Serine/threonine-protein kinase TOR OS=Arabidopsis thaliana GN=TOR PE=1 SV=1

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 245/546 (44%), Gaps = 105/546 (19%)

Query: 7    PWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWL 66
            P  ++YP LV   +         Q ++  +R+    L+   +L+ +EL  + +LW E+W 
Sbjct: 1874 PQALMYPLLVACKSISNLRRAAAQEVVDKVRQHSGALVDQAQLVSHELIRVAILWHEMWH 1933

Query: 67   STLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLAS 126
              L               EEA+R+            + N      ++ P+   L+  +  
Sbjct: 1934 EAL---------------EEASRLYFG---------EHNIEGMLKVLEPLHDMLDEGVKK 1969

Query: 127  TSRKPETPHEIWFHEEFGEQLKSA---ILNFKTPPASAAALGDVW----RPFDNIAASLA 179
             S    T  E  F E +  +LK A     N+K      A L   W      F  I   LA
Sbjct: 1970 DS---TTIQERAFIEAYRHELKEAHECCCNYKIT-GKDAELTQAWDLYYHVFKRIDKQLA 2025

Query: 180  SHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEV 239
            S    +++ L  V+P+L L    ++ +PG      T  +D         +VTI+SFS ++
Sbjct: 2026 S---LTTLDLESVSPELLLCRDLELAVPG------TYRADAP-------VVTISSFSRQL 2069

Query: 240  SILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSL 277
             ++++K +P+KL I G                        L   VN+ L +S  T    L
Sbjct: 2070 VVITSKQRPRKLTIHGNDGEDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSRKTAEKDL 2129

Query: 278  GIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPR 337
             I+ YSV P+S  +GLI WV N  +++ + +  +HR            +A+         
Sbjct: 2130 SIQRYSVIPLSPNSGLIGWVPNCDTLHHLIR--EHR------------DAR--------- 2166

Query: 338  PSDMFYGKIIPALKEKGIRRVISRRD-WPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGF 396
                   KII   + K +       D  P   K +V    ++      L + +W  S   
Sbjct: 2167 -------KIILNQENKHMLSFAPDYDNLPLIAKVEVFEYALENTEGNDLSRVLWLKSRSS 2219

Query: 397  KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG-QRLK 455
            + +  +   Y+ S+A MSMVG+ILGLGDRH  N++L   SG I+HID+  CF+    R K
Sbjct: 2220 EVWLERRTNYTRSLAVMSMVGYILGLGDRHPSNLMLHRYSGKILHIDFGDCFEASMNREK 2279

Query: 456  VPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT 515
             PE VPFRLT+ +  A+ ++GIEG FR+ CE V+ VLR NKD ++ ++E FV DPLI W 
Sbjct: 2280 FPEKVPFRLTRMLVKAMEVSGIEGNFRSTCENVMQVLRTNKDSVMAMMEAFVHDPLINWR 2339

Query: 516  RGDFHD 521
              +F++
Sbjct: 2340 LFNFNE 2345

Essential cell growth regulator that controls development from early embryo to seed production. Controls plant growth in environmental stress conditions. Acts through the phosphorylation of downstream effectors that are recruited by the binding partner RAPTOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q86C65|TOR_DICDI Target of rapamycin OS=Dictyostelium discoideum GN=tor PE=1 SV=1

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 245/544 (45%), Gaps = 109/544 (20%)

Query: 2    LAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLW 61
            + K  P  +VYP  V   ++        + ++  +R+    L+     +  EL    +LW
Sbjct: 1772 IGKEHPQALVYPLTVATKSHSPARLAAAKSLMDKMRKHSATLVDQALPVSQELVRTAILW 1831

Query: 62   EELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALE 121
             E+W   L               EEA+R               N     A +AP+   LE
Sbjct: 1832 LEMWYEGL---------------EEASR---------QYFGDHNPEAMLATLAPLHQILE 1867

Query: 122  RRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDV-------WRPFDNI 174
            +        PET  E  F + FG  L+ A L +          GD+       ++ F  I
Sbjct: 1868 K-------GPETTSETSFLQAFGRDLQEA-LEWSKKYEKTRKEGDLNQAWDLYYQVFRRI 1919

Query: 175  AASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIAS 234
               L    + SS+ L  V+P+L   ++ ++ +PG  K    SE+          ++ I S
Sbjct: 1920 YKQLP---QMSSLELQYVSPKLLNSNNMELAVPGTYK---ASEN----------VIRIQS 1963

Query: 235  FSEEVSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPAT 272
            FS+ +S++ +K +P+KL I+G                        L   VN+ L ++  T
Sbjct: 1964 FSQALSVIPSKQRPRKLTIIGSDGLEYTFLLKGHEDLRQDERVMQLFSLVNNLLSANHET 2023

Query: 273  RSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVP 332
                L IR +SV P+S  +GLI WV +  +++++ K ++                     
Sbjct: 2024 AKSHLSIRRFSVIPLSPNSGLIGWVPHSDTLHTLIKDFRDS------------------- 2064

Query: 333  PPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQL-LHQEIWC 391
                        KI+ +++ + + ++ S  D    +++  +     E    L LH+ +W 
Sbjct: 2065 -----------NKILLSIEHRLMLQMCSDYDNLTLLQKVEVFQYALENSNGLDLHKVLWL 2113

Query: 392  ASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG 451
             S   + +  +   Y+ S+A MSMVG+ILGLGDRH  N++LD  +G I+HID+  CF+  
Sbjct: 2114 KSRNSEVWLDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRHTGHILHIDFGDCFEVA 2173

Query: 452  -QRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDP 510
              R K PE +PFRLT+ +  A+ ++GIEG FR  CEAV++VLR NK+ L+ +LE FV DP
Sbjct: 2174 MHRDKYPEKIPFRLTRMLINAMEVSGIEGNFRLTCEAVMNVLRNNKESLMAVLEAFVHDP 2233

Query: 511  LIEW 514
            LI W
Sbjct: 2234 LINW 2237

Regulates cell growth, chemotaxis, signal relay and the actin cytoskeleton. Functions as a part of 2 distinct protein complexes TORC1 and TORC2. TORC1 is a rapamycin-sensitive complex that controls cell growth in response to nutrients and growth factors. The second TOR complex, TORC2, is presumed to be indirectly negatively modulated by rapamycin and regulates actin polarization. TORC2 but not TORC1 negatively regulates phagocytosis. TORC2-dependent regulation of the cytoskeleton may follow differential phosphorylation of pkbA. May have some protein kinase activity, as it appears to phosphorylate pkgB.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: -

>sp|Q0DJS1|TOR_ORYSJ Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica GN=TOR PE=2 SV=3

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 243/551 (44%), Gaps = 109/551 (19%)

Query: 2    LAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLW 61
            + K  P  ++YP LV   +         Q ++  +R+    L+   +L+  EL  + +LW
Sbjct: 1859 IGKDHPQALMYPLLVACKSISILRQRAAQEVVDKIRQHSGGLVDQAQLVSKELIRVAILW 1918

Query: 62   EELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALE 121
             E+W   L               EEA+R+            + N     A++ P+   LE
Sbjct: 1919 HEMWHEAL---------------EEASRMYFG---------EHNIEGMLAVLEPLHAMLE 1954

Query: 122  RRLASTSRKPETPHEIWFHEEFGEQLKSA---ILNFKTPPASAAALGDVW----RPFDNI 174
            R        PET  E  F + +G +L  A    L ++      A L   W      F  I
Sbjct: 1955 R-------GPETIKENTFIQAYGHELLEAHECCLKYRAT-GEDAELTKAWDLYYHVFRRI 2006

Query: 175  AASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIAS 234
               L S    +++ L  V+P+L      ++ +PG      T  +D  L       VTI  
Sbjct: 2007 DKQLPS---LTTLDLHSVSPELLECRKLELAVPG------TYSADAPL-------VTIEY 2050

Query: 235  FSEEVSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPAT 272
            F  ++ ++++K +P+KL I G                        L   VN+ L +S  T
Sbjct: 2051 FVPQLIVITSKQRPRKLTIHGSDGNDYAFLLKGHEDLRQDERVMQLFGLVNTLLENSRKT 2110

Query: 273  RSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVP 332
                L I+ Y+V P+S  +GLI WV N  +++++ + ++              +A+    
Sbjct: 2111 SEKDLSIQRYAVIPLSPNSGLIGWVPNCDTLHALIREYR--------------DAR---- 2152

Query: 333  PPVPRPSDMFYGKIIPALKEKGIRRVISRRD-WPHDVKRKVLLDLMKEVPRQLLHQEIWC 391
                        KI    + + +       D  P   K +V    ++      L + +W 
Sbjct: 2153 ------------KIFLNQEHRCMLSFAPDYDHLPLIAKVEVFQHALENSEGNDLAKVLWL 2200

Query: 392  ASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG 451
             S   + +  +   Y+ S+A MSMVG++LGLGDRH  N++LD  SG I+HID+  CF+  
Sbjct: 2201 KSRTSEVWLERRTNYTRSLAVMSMVGYLLGLGDRHPSNLMLDRYSGKILHIDFGDCFEAS 2260

Query: 452  -QRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDP 510
              R K PE VPFRLT+ +  A+ ++GIEGTFR  CE V+ VLR NKD ++ ++E FV DP
Sbjct: 2261 MNREKFPEKVPFRLTRMLVKAMEVSGIEGTFRTTCENVMQVLRTNKDSVMAMMEAFVHDP 2320

Query: 511  LIEWTRGDFHD 521
            LI W   +F++
Sbjct: 2321 LINWRLFNFNE 2331

Essential cell growth regulator that controls plant development. Acts through the phosphorylation of downstream effectors that are recruited by the binding partner RAPTOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1989
359475153	3787	PREDICTED: serine/threonine-protein kina	0.992	0.521	0.752	0.0
255556185	3804	conserved hypothetical protein [Ricinus	0.981	0.513	0.720	0.0
297741391	3305	unnamed protein product [Vitis vinifera]	0.906	0.545	0.703	0.0
356541123	3720	PREDICTED: serine/threonine-protein kina	0.976	0.522	0.685	0.0
357473157	3764	Serine/threonine protein kinase atr [Med	0.957	0.506	0.683	0.0
449455326	3931	PREDICTED: uncharacterized protein LOC10	0.992	0.502	0.651	0.0
449511923	3865	PREDICTED: uncharacterized LOC101222679	0.971	0.500	0.634	0.0
297832098	3792	hypothetical protein ARALYDRAFT_899833 [	0.985	0.516	0.612	0.0
297601656	3476	Os03g0738100 [Oryza sativa Japonica Grou	0.862	0.493	0.552	0.0
31126780	3454	putative phosphatidylinositol 3-kinase-r	0.849	0.488	0.545	0.0

>gi|359475153|ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase SMG1 [Vitis vinifera]

 Score = 3031 bits (7859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1530/2033 (75%), Positives = 1731/2033 (85%), Gaps = 58/2033 (2%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAKLSPW IVYPTLVDVNAYEE PSEELQH++GCL +LYPRLIQDV+LMINEL N+TVL
Sbjct: 1769 MLAKLSPWSIVYPTLVDVNAYEEEPSEELQHVVGCLSKLYPRLIQDVQLMINELENVTVL 1828

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDLH+DVMRRIN+LKEEAARIAEN TLSQ EK KINAAKYSAMMAP+VVAL
Sbjct: 1829 WEELWLSTLQDLHSDVMRRINLLKEEAARIAENVTLSQGEKNKINAAKYSAMMAPVVVAL 1888

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHEIWFHEE+ EQLKSAIL FKTPPAS+AALGDVWRPFDNIAASL+S
Sbjct: 1889 ERRLASTSRKPETPHEIWFHEEYREQLKSAILTFKTPPASSAALGDVWRPFDNIAASLSS 1948

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            +QRKSS+SL EVAPQL+LLSSSDVPMPG E+Q+  SESD GLTATL+GIVTIASFSE+V+
Sbjct: 1949 YQRKSSISLGEVAPQLALLSSSDVPMPGLERQIIASESDRGLTATLQGIVTIASFSEQVA 2008

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            ILSTKTKPKK+VILG                        LLQA N FLRSSP TRSHSL 
Sbjct: 2009 ILSTKTKPKKIVILGSDGHKYTYLLKGREDLRLDARIMQLLQAFNGFLRSSPETRSHSLV 2068

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISGRAGLIQWVDNVISIYS+FKSWQ+RAQLA  S++GAGN K+SVPPPVPRP
Sbjct: 2069 IRYYSVTPISGRAGLIQWVDNVISIYSIFKSWQNRAQLAHLSSLGAGNTKNSVPPPVPRP 2128

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGIRRVISRRDWPH+VKRKVLLDLMKE PRQLLHQE+WCASEGFKA
Sbjct: 2129 SDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEAPRQLLHQELWCASEGFKA 2188

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            FSLKLKRYS SVAAMSMVGHILGLGDRHLDNIL+DF +GDIVHIDYNVCFDKGQRLK+PE
Sbjct: 2189 FSLKLKRYSGSVAAMSMVGHILGLGDRHLDNILMDFFTGDIVHIDYNVCFDKGQRLKIPE 2248

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQ IE ALGLTGIEGTFRANCEAVV VLRKNKDILLMLLEVFVWDPL+EWTRGD
Sbjct: 2249 IVPFRLTQMIETALGLTGIEGTFRANCEAVVGVLRKNKDILLMLLEVFVWDPLVEWTRGD 2308

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVL 578
            FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVE ALERF+D+L
Sbjct: 2309 FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVESALERFSDIL 2368

Query: 579  SQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVT 638
            ++YEL SALFYRADQERSNL+LHETS KS+VAEA CN+EK RASFE+QAREFAQAKAVV 
Sbjct: 2369 NKYELVSALFYRADQERSNLILHETSAKSIVAEATCNSEKTRASFEIQAREFAQAKAVVA 2428

Query: 639  EKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEP 698
            E AQEATTWMEQHGRIL+ALR +LIPEI +CI LS   DA SLTSAVLVAGVP +IVPEP
Sbjct: 2429 EMAQEATTWMEQHGRILEALRSSLIPEIKACINLSSMQDALSLTSAVLVAGVPLTIVPEP 2488

Query: 699  TQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQL 758
            TQ QCHDID++VSQLIAELDHGLS    ALQAYSLALQRILPLNYLTT+ +HGWAQVLQL
Sbjct: 2489 TQAQCHDIDREVSQLIAELDHGLSCSVTALQAYSLALQRILPLNYLTTSPLHGWAQVLQL 2548

Query: 759  SANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAEL 818
            S++  S DILS+  RQA EL+ +++GD+ DSIK +HDDL LKVEKY VEIEKVE+ECAEL
Sbjct: 2549 SSSTLSSDILSITIRQAAELVAKVNGDDFDSIKCDHDDLCLKVEKYAVEIEKVEEECAEL 2608

Query: 819  VNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDE 878
            VNSIGSETESKAKDR L AFMKYM+SAGL RKED  SS Q GQ K+DG K+A  +G  +E
Sbjct: 2609 VNSIGSETESKAKDRLLSAFMKYMQSAGLARKEDTISSVQLGQFKHDGTKEARFQGALEE 2668

Query: 879  NKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCI 938
             K+K+L +L++AV+ LYDEVK RVL IF++ A     +N +Q DFGT+FC+F+EQVEKCI
Sbjct: 2669 KKDKVLYILSIAVSSLYDEVKHRVLGIFTNLAERSSADNWLQSDFGTIFCKFEEQVEKCI 2728

Query: 939  LVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPD 998
            LVAGF NEL Q I  DM     DIE   Y+ ERNWASIF+TSLL+CK LVG+MTE +LPD
Sbjct: 2729 LVAGFANELQQVINGDMPTVRTDIEHSRYYSERNWASIFRTSLLSCKGLVGKMTEDILPD 2788

Query: 999  VMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQ 1058
            V++S +SFNSEVMDAFG +SQIRGSID  LEQLVEVE+ERASLVELEQ+YF+KVG+ITEQ
Sbjct: 2789 VIKSIVSFNSEVMDAFGSLSQIRGSIDMALEQLVEVEIERASLVELEQNYFLKVGVITEQ 2848

Query: 1059 QLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRN 1118
            QLALEEAA+KGRDHLSWEEAEELASQEEAC+A+L++LHQTWNQ+D R+SSL+K+EA I+N
Sbjct: 2849 QLALEEAALKGRDHLSWEEAEELASQEEACRAQLDQLHQTWNQKDKRTSSLIKKEAVIKN 2908

Query: 1119 ALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYG 1178
            ALVSS+R FQS+I   E REP     K LLA LVKPF ELES+DK L+SF  SV      
Sbjct: 2909 ALVSSKRLFQSLIIDGEEREPQGRGGKGLLAKLVKPFSELESIDKALSSFGGSVAFYSRA 2968

Query: 1179 TPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFD 1238
             P  ADL++S   +SE IW F SL N H+FF+W++G++DSFLDSC+HDV +SVDQ+LGFD
Sbjct: 2969 IPNPADLMSSAYPMSEYIWKFDSLLNSHTFFVWEIGVMDSFLDSCIHDVTSSVDQSLGFD 3028

Query: 1239 QLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDT 1298
            QLFNV+KKKLE+QLQEH+  YLKERVAPI+LA LDKE EHLK+LTE+TKEL  D  KKD 
Sbjct: 3029 QLFNVIKKKLEIQLQEHIVQYLKERVAPILLALLDKEKEHLKQLTEATKELAFDQGKKDL 3088

Query: 1299 GAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLT 1358
            GAV++VQLML EYCNAHETA AARSAASLMKRQVNE REA+ KTSLEIVQMEWMHD +LT
Sbjct: 3089 GAVKKVQLMLEEYCNAHETASAARSAASLMKRQVNELREAVLKTSLEIVQMEWMHDVSLT 3148

Query: 1359 PSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAE 1418
             S+N+R+ +QK+ ++DD +YPIILNL+RPKLLE++QS+V+KIARSVE LQACER+S+TAE
Sbjct: 3149 SSHNNRVIWQKFIANDDSLYPIILNLNRPKLLESMQSAVSKIARSVEFLQACERTSITAE 3208

Query: 1419 GQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMS 1478
            GQLERAMGWACGGPNSSA GN+STK+SGIPPEF+DHL RRRQLLWE REKAS ++ IC+S
Sbjct: 3209 GQLERAMGWACGGPNSSATGNTSTKSSGIPPEFNDHLTRRRQLLWEVREKASDMIKICVS 3268

Query: 1479 VLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQS 1538
            VL+FEASRDG+FR PG         D R+WQQ Y NA+T+L+V YHSFT  EQEWKLAQS
Sbjct: 3269 VLEFEASRDGIFRIPGG--------DGRTWQQAYFNALTRLDVTYHSFTRTEQEWKLAQS 3320

Query: 1539 SMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTA 1598
            S+EAASNGLY+ATNELCIAS+KAKSAS DLQSTVL MRDCAYEAS AL+AF RV+R HTA
Sbjct: 3321 SVEAASNGLYTATNELCIASVKAKSASADLQSTVLAMRDCAYEASVALSAFSRVTRGHTA 3380

Query: 1599 LTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAA 1658
            LTSE GSMLEEVL ITE LHDVHSLGKEAAA++HSLMEDLSKAN VLLPL+SVLSKDVAA
Sbjct: 3381 LTSECGSMLEEVLVITEGLHDVHSLGKEAAAVHHSLMEDLSKANMVLLPLESVLSKDVAA 3440

Query: 1659 MSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLA 1718
            M+DA+T ERETK+E+SPIHGQAIYQSYCLR+R+AC   KPL+PSL  SVKGLYSMLTRLA
Sbjct: 3441 MTDAMTRERETKLEISPIHGQAIYQSYCLRIREACPAFKPLVPSLTFSVKGLYSMLTRLA 3500

Query: 1719 RTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIK 1778
            RTASLHAGNLHKALEGLGESQEV+SQ ++LSR++L A+D+SQ   K RE FS SD G+  
Sbjct: 3501 RTASLHAGNLHKALEGLGESQEVRSQEINLSRTNL-ASDASQSGNKDREIFSRSDEGN-A 3558

Query: 1779 DDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELTGQHPHGLNQ- 1837
            +D LGV+G+SLQDKGWISPPDS+YSSSSES I S EASLPDS   P E+  +  +G N  
Sbjct: 3559 EDLLGVAGLSLQDKGWISPPDSVYSSSSESVIISDEASLPDSHTAPAEMMARLSYGSNSR 3618

Query: 1838 ---------------------DSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTG 1876
                                 + GQS SK TE NN+D+ SVK   +EP E+ KA  SP  
Sbjct: 3619 EGTDYLNSVSSSGTDFQEISLNCGQSESKYTEYNNSDASSVKSPTNEPSEHLKAAASPKN 3678

Query: 1877 EAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAY 1936
            E+++V + +S+ L   +E  F  KDE SS N+V IE+EN E  +PNT   SR+ARGKNAY
Sbjct: 3679 ESITV-IDTSKSL---NEEDFEGKDETSSSNQVKIEDENREARLPNTDAGSRIARGKNAY 3734

Query: 1937 AISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
            AISVLRRVEMKLDGRDI +NR +SIAEQVD+LLKQATS+DNLCNMYEGWTPWI
Sbjct: 3735 AISVLRRVEMKLDGRDIADNREISIAEQVDYLLKQATSIDNLCNMYEGWTPWI 3787

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556185|ref|XP_002519127.1| conserved hypothetical protein [Ricinus communis] gi|223541790|gb|EEF43338.1| conserved hypothetical protein [Ricinus communis]

 Score = 2909 bits (7540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1474/2045 (72%), Positives = 1683/2045 (82%), Gaps = 92/2045 (4%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAK SPW IVYPTLVD+NA EE+PSEELQHILGCL+ELYPRL+QDV+LMINELGN+TVL
Sbjct: 1796 MLAKKSPWSIVYPTLVDINANEEKPSEELQHILGCLKELYPRLVQDVQLMINELGNVTVL 1855

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEK KINAAKYSAMMAPIVVAL
Sbjct: 1856 WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKNKINAAKYSAMMAPIVVAL 1915

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHE+WF EE+ EQLK AIL FKTPPAS+AALGDVWRPF++IAASLAS
Sbjct: 1916 ERRLASTSRKPETPHEVWFSEEYREQLKLAILTFKTPPASSAALGDVWRPFNDIAASLAS 1975

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            +QRKSS+SL EVAPQL+LLSSSDVPMPG EKQV  SES+ GLT TL+ IVTIASFSE+V+
Sbjct: 1976 YQRKSSISLGEVAPQLALLSSSDVPMPGLEKQVTASESEKGLTTTLQRIVTIASFSEQVT 2035

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            ILSTKTKPKK+VI G                        LLQA+N  + SS +TR H L 
Sbjct: 2036 ILSTKTKPKKIVIHGSDGQKYTYLLKGREDLRLDARIMQLLQAINGLMHSSSSTRKHLLA 2095

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISG+AGLIQWVDNVISIYSVFKSWQ+R QLAQ + +G  NAK+SVPPPVPRP
Sbjct: 2096 IRYYSVTPISGQAGLIQWVDNVISIYSVFKSWQNRVQLAQLTGMGPSNAKNSVPPPVPRP 2155

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLL+QE WCASEGFKA
Sbjct: 2156 SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLYQEFWCASEGFKA 2215

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            FS KL+RYS SVAAMSMVGHILGLGDRHLDNIL+DF SGDIVHIDYN+CFDKGQRLK+PE
Sbjct: 2216 FSSKLRRYSGSVAAMSMVGHILGLGDRHLDNILVDFCSGDIVHIDYNICFDKGQRLKIPE 2275

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQ IEAALGLTG+EGTFRANCEAVVSVLR+NKD+LLMLLEVFVWDPL+EWTRGD
Sbjct: 2276 IVPFRLTQMIEAALGLTGVEGTFRANCEAVVSVLRENKDVLLMLLEVFVWDPLVEWTRGD 2335

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVL 578
            FHDDA IGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPA+E ALERFAD L
Sbjct: 2336 FHDDATIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAIESALERFADAL 2395

Query: 579  SQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVT 638
             +YELASALFY ADQERS+LVLHETS KS+V EA   +EKIRASFE+QAREFAQAKA V 
Sbjct: 2396 HKYELASALFYCADQERSSLVLHETSAKSIVVEATSKSEKIRASFEIQAREFAQAKAAVV 2455

Query: 639  EKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEP 698
            +KAQEA TW+EQHGRILDALR NL+PE+NSCIKLS   +A SLTSAV  AGVP +IVPEP
Sbjct: 2456 DKAQEAATWIEQHGRILDALRSNLVPEVNSCIKLSNMTNALSLTSAVQAAGVPLTIVPEP 2515

Query: 699  TQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQL 758
            TQ QC DID++VSQLIAELDHGLSS    +Q YSLALQRILPLNYLTT++VHGWAQVLQL
Sbjct: 2516 TQAQCQDIDREVSQLIAELDHGLSSALTGVQIYSLALQRILPLNYLTTSSVHGWAQVLQL 2575

Query: 759  SANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAEL 818
            SANA S DILSLARRQA ELI + HGD+ DS+K  HDDL LKVEKY ++I+ VE E +EL
Sbjct: 2576 SANALSSDILSLARRQAAELIAKTHGDSLDSVKHWHDDLCLKVEKYAIDIQNVEAESSEL 2635

Query: 819  VNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDE 878
             NS+G ETE+KAKDR L AF KYM+SAG+V+KED S  Y  GQ K D   DA L+ +Q+E
Sbjct: 2636 ENSVGLETETKAKDRLLSAFAKYMQSAGIVKKEDSSPLYLPGQSKYD---DARLQEEQEE 2692

Query: 879  NKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCI 938
             KEK+LSVLN+AV+ LY+EVK  V +IF +SAGG   N+    +F T+F  F+EQVEKC+
Sbjct: 2693 KKEKVLSVLNIAVSSLYNEVKHSVFNIFGNSAGGGNAND----NFRTVFSGFEEQVEKCM 2748

Query: 939  LVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPD 998
            LVAGFVNEL Q IG D+   D  +       E+NWAS FKTSLL+CK+L+GQM EVVLPD
Sbjct: 2749 LVAGFVNELQQFIGWDIGSADTHVNNLEKDAEKNWASKFKTSLLSCKSLIGQMIEVVLPD 2808

Query: 999  VMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQ 1058
            VMRS +SFNSEVMDAFGL+SQIRGSIDT LE+L+EVELE+ SLVELE++YFVKVGLITEQ
Sbjct: 2809 VMRSAVSFNSEVMDAFGLISQIRGSIDTALEELLEVELEKISLVELEKNYFVKVGLITEQ 2868

Query: 1059 QLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRN 1118
            QLALEEAAVKGRDHLSWEEAEELASQEEAC+A+L++LHQTWN+R+MR++SL+K+EADIRN
Sbjct: 2869 QLALEEAAVKGRDHLSWEEAEELASQEEACRAQLDQLHQTWNEREMRTTSLVKKEADIRN 2928

Query: 1119 ALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYG 1178
            A+ SSE HFQS++S E   E HI  SKALL +LVKPF ELESVDK L++F          
Sbjct: 2929 AIFSSECHFQSLVSTEVVGESHIFGSKALLTMLVKPFSELESVDKALSTF---------- 2978

Query: 1179 TPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFD 1238
                         +SE IW F  L N  SFFIWK+ ++DSFLD C+HDVA+SVDQNLGFD
Sbjct: 2979 ------------GVSEYIWKFDGLLNSQSFFIWKVCVVDSFLDLCIHDVASSVDQNLGFD 3026

Query: 1239 QLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDT 1298
            QLFNVVK+KLE QLQEHVG YLKER  P  LA+LD+E E    LTEST+ELT D  +KD 
Sbjct: 3027 QLFNVVKRKLEAQLQEHVGRYLKERAVPTFLAWLDRENE---CLTESTQELTIDQLRKDV 3083

Query: 1299 GAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLT 1358
            GAVR+VQLML EYCNAHETARA RSAAS+MKRQVN+F+E LHKTSLEIVQ+EWM+D TLT
Sbjct: 3084 GAVRKVQLMLEEYCNAHETARAVRSAASIMKRQVNDFKEVLHKTSLEIVQLEWMYD-TLT 3142

Query: 1359 PSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAE 1418
            PS+ SR T QK+  S+D +Y +ILNLSRPKLLE +QS++TK+ARS++SLQACER+S+ AE
Sbjct: 3143 PSHYSRATLQKFLGSEDSLYSVILNLSRPKLLEGMQSAITKMARSMDSLQACERNSVVAE 3202

Query: 1419 GQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMS 1478
            GQLERAMGWACGGPNSS  GN S KTSGIPPEFHDHLMRRR++L EAREKAS I+ ICMS
Sbjct: 3203 GQLERAMGWACGGPNSSMTGNMSNKTSGIPPEFHDHLMRRRKMLQEAREKASDIIKICMS 3262

Query: 1479 VLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQS 1538
            +L+FEASRDGVFR PG++YP   G D R+WQQ YLN++TKLEV YHSFTC EQEWKLAQS
Sbjct: 3263 ILEFEASRDGVFRIPGDIYPFGTGADGRTWQQAYLNSLTKLEVTYHSFTCTEQEWKLAQS 3322

Query: 1539 SMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTA 1598
            SMEAAS+GLYSATNELC ASLKAKSASG+LQSTVL MRDCA+EAS AL++F RVSR  TA
Sbjct: 3323 SMEAASSGLYSATNELCAASLKAKSASGELQSTVLAMRDCAHEASVALSSFARVSRGQTA 3382

Query: 1599 LTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAA 1658
            LTSESG+ML+EVLAITEDLHDVH LGKEAAA++HSLMEDL+KANA+LLPL+SVLSKDV A
Sbjct: 3383 LTSESGTMLDEVLAITEDLHDVHKLGKEAAAMHHSLMEDLAKANAILLPLESVLSKDVNA 3442

Query: 1659 MSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLA 1718
            M+DA+T ERE KME+SPIHG AIYQSYCLR+R+A Q  KP++ SL  SVKGLY +L RLA
Sbjct: 3443 MTDAMTRERENKMEISPIHGHAIYQSYCLRIREATQTFKPVVQSLALSVKGLYLILMRLA 3502

Query: 1719 RTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIK 1778
            RT+S HAGNLHKALEGL ESQ+VKS+G+SLSR DL A   ++FD+K RE  SGSDSG   
Sbjct: 3503 RTSSFHAGNLHKALEGLAESQDVKSEGISLSRPDLDAGH-NEFDDKERENLSGSDSGG-T 3560

Query: 1779 DDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELTGQHPHGLN-- 1836
            +DFL  +G+ L+DKGWISPPDSIYS SSES ITS EAS+PDS N+P E+ GQ+ HG N  
Sbjct: 3561 EDFLNDTGLYLEDKGWISPPDSIYSGSSESGITSAEASIPDSFNDPAEIMGQYSHGSNSR 3620

Query: 1837 -------------------QDSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTGE 1877
                                 S QS  K  E  N+D  SV   V E  E+ K+   P+GE
Sbjct: 3621 VVTDYPNYAPSSQTHNQEVSQSDQSAPKGEEAKNSDDSSVT-AVSELNEHLKSVALPSGE 3679

Query: 1878 AVSVAVGSSQPLG-NNSEVKFGVKDEV-SSVNKVGIEEENNEDHVPNTHTVSRVA----- 1930
            A++    SSQPL   +SE+K   K+ V  S++K  +++E++E   P++H   RVA     
Sbjct: 3680 ALAAHFESSQPLNEGSSELKIEGKEAVMYSLSKSKLKDEDHEAPHPHSHMGYRVARDESL 3739

Query: 1931 ------RGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEG 1984
                  R KNAYA+SVLRRVEMK+DG+DI + R +S+ EQVD+L+KQA SVDNLCNMYEG
Sbjct: 3740 NSRDALRDKNAYAMSVLRRVEMKIDGQDISDKREISVGEQVDYLIKQAMSVDNLCNMYEG 3799

Query: 1985 WTPWI 1989
            WTPWI
Sbjct: 3800 WTPWI 3804

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741391|emb|CBI32522.3| unnamed protein product [Vitis vinifera]

 Score = 2765 bits (7167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1431/2033 (70%), Positives = 1606/2033 (78%), Gaps = 229/2033 (11%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAKLSPW IVYPTLVDVNAYEE PSEELQH++GCL +LYPRLIQDV+LMINEL N+TVL
Sbjct: 1458 MLAKLSPWSIVYPTLVDVNAYEEEPSEELQHVVGCLSKLYPRLIQDVQLMINELENVTVL 1517

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDLH+DVMRRIN+LKEEAARIAEN TLSQ EK KINAAKYSAMMAP+VVAL
Sbjct: 1518 WEELWLSTLQDLHSDVMRRINLLKEEAARIAENVTLSQGEKNKINAAKYSAMMAPVVVAL 1577

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHEIWFHEE+ EQLKSAIL FKTPPAS                    
Sbjct: 1578 ERRLASTSRKPETPHEIWFHEEYREQLKSAILTFKTPPAS-------------------- 1617

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
                       +APQL+LLSSSDVPMPG E+Q+  SESD GLTATL+GIVTIASFSE+V+
Sbjct: 1618 -----------IAPQLALLSSSDVPMPGLERQIIASESDRGLTATLQGIVTIASFSEQVA 1666

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            ILSTKTKPKK+VILG                        LLQA N FLRSSP TRSHSL 
Sbjct: 1667 ILSTKTKPKKIVILGSDGHKYTYLLKGREDLRLDARIMQLLQAFNGFLRSSPETRSHSLV 1726

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISGRAGLIQWVDNVISIYS+FKSWQ+RAQLA  S++GAGN K+SVPPPVPRP
Sbjct: 1727 IRYYSVTPISGRAGLIQWVDNVISIYSIFKSWQNRAQLAHLSSLGAGNTKNSVPPPVPRP 1786

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGIRRVISRRDWPH+VKRKVLLDLMKE PRQLLHQE+WCASEGFKA
Sbjct: 1787 SDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEAPRQLLHQELWCASEGFKA 1846

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            FSLKLKRYS SVAAMSMVGHILGLGDRHLDNIL+DF +GDIVHIDYNVCFDKGQRLK+PE
Sbjct: 1847 FSLKLKRYSGSVAAMSMVGHILGLGDRHLDNILMDFFTGDIVHIDYNVCFDKGQRLKIPE 1906

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQ IE ALGLTGIEGTFRANCEAVV VLRKNKDILLMLLEVFVWDPL+EWTRGD
Sbjct: 1907 IVPFRLTQMIETALGLTGIEGTFRANCEAVVGVLRKNKDILLMLLEVFVWDPLVEWTRGD 1966

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVL 578
            FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVE ALERF+D+L
Sbjct: 1967 FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVESALERFSDIL 2026

Query: 579  SQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVT 638
            ++YEL SALFYRADQERSNL+LHETS KS+VAEA CN+EK RASFE+QAREFAQAKAVV 
Sbjct: 2027 NKYELVSALFYRADQERSNLILHETSAKSIVAEATCNSEKTRASFEIQAREFAQAKAVVA 2086

Query: 639  EKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEP 698
            E AQEATTWMEQHGRIL+ALR +LIPEI +CI LS   DA SLTSAVLVAGVP +IVPEP
Sbjct: 2087 EMAQEATTWMEQHGRILEALRSSLIPEIKACINLSSMQDALSLTSAVLVAGVPLTIVPEP 2146

Query: 699  TQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQL 758
            TQ QCHDID++VSQLIAELDHGLS    ALQAYSLALQRILPLNYLTT+ +HGWAQVLQL
Sbjct: 2147 TQAQCHDIDREVSQLIAELDHGLSCSVTALQAYSLALQRILPLNYLTTSPLHGWAQVLQL 2206

Query: 759  SANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAEL 818
            S++  S DILS+  RQA EL+ +++GD+ DSIK +HDDL LKVEKY VEIEKVE+ECAEL
Sbjct: 2207 SSSTLSSDILSITIRQAAELVAKVNGDDFDSIKCDHDDLCLKVEKYAVEIEKVEEECAEL 2266

Query: 819  VNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDE 878
            VNSIGSETESKAKDR L AFMKYM+SAGL RKED  SS                      
Sbjct: 2267 VNSIGSETESKAKDRLLSAFMKYMQSAGLARKEDTISS---------------------- 2304

Query: 879  NKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCI 938
             K+K+L +L++AV+ LYDEVK RVL IF++ A     +N +Q DFGT+FC+F+EQVEKCI
Sbjct: 2305 -KDKVLYILSIAVSSLYDEVKHRVLGIFTNLAERSSADNWLQSDFGTIFCKFEEQVEKCI 2363

Query: 939  LVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPD 998
            LVAGF NEL Q I  DM     DIE   Y+ ERNWASIF+TSLL+CK LVG+MTE +LPD
Sbjct: 2364 LVAGFANELQQVINGDMPTVRTDIEHSRYYSERNWASIFRTSLLSCKGLVGKMTEDILPD 2423

Query: 999  VMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQ 1058
            V++S +SFNSEVMDAFG +SQIRGSID  LEQLVEVE+ERASLVELEQ+YF+KVG+ITEQ
Sbjct: 2424 VIKSIVSFNSEVMDAFGSLSQIRGSIDMALEQLVEVEIERASLVELEQNYFLKVGVITEQ 2483

Query: 1059 QLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRN 1118
            QLALEEAA+KGRDHLSWEEAEELASQEEAC+                             
Sbjct: 2484 QLALEEAALKGRDHLSWEEAEELASQEEACRG---------------------------- 2515

Query: 1119 ALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYG 1178
                                      K LLA LVKPF ELES+DK L+SF  S       
Sbjct: 2516 -------------------------GKGLLAKLVKPFSELESIDKALSSFGGS------- 2543

Query: 1179 TPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFD 1238
                                F SL N H+FF+W++G++DSFLDSC+HDV +SVDQ+LGFD
Sbjct: 2544 --------------------FDSLLNSHTFFVWEIGVMDSFLDSCIHDVTSSVDQSLGFD 2583

Query: 1239 QLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDT 1298
            QLFNV+KKKLE+QLQEH+  YLKERVAPI+LA LDKE EHLK+LTE+TKEL  D  KKD 
Sbjct: 2584 QLFNVIKKKLEIQLQEHIVQYLKERVAPILLALLDKEKEHLKQLTEATKELAFDQGKKDL 2643

Query: 1299 GAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLT 1358
            GAV++VQLML EYCNAHETA AARSAASLMKRQVNE REA+ KTSLEIVQMEWMHD +LT
Sbjct: 2644 GAVKKVQLMLEEYCNAHETASAARSAASLMKRQVNELREAVLKTSLEIVQMEWMHDVSLT 2703

Query: 1359 PSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAE 1418
             S+N+R+ +QK+ ++DD +YPIILNL+RPKLLE++QS+V+KIARSVE LQACER+S+TAE
Sbjct: 2704 SSHNNRVIWQKFIANDDSLYPIILNLNRPKLLESMQSAVSKIARSVEFLQACERTSITAE 2763

Query: 1419 GQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMS 1478
            GQLERAMGWACGGPNSSA GN+STK+SGIPPEF+DHL RRRQLLWE REKAS ++ IC+S
Sbjct: 2764 GQLERAMGWACGGPNSSATGNTSTKSSGIPPEFNDHLTRRRQLLWEVREKASDMIKICVS 2823

Query: 1479 VLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQS 1538
            VL+FEASRDG+FR PG         D R+WQQ Y NA+T+L+V YHSFT  EQEWKLAQS
Sbjct: 2824 VLEFEASRDGIFRIPGG--------DGRTWQQAYFNALTRLDVTYHSFTRTEQEWKLAQS 2875

Query: 1539 SMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTA 1598
            S+EAASNGLY+ATNELCIAS+KAKSAS DLQSTVL MRDCAYEAS AL+AF RV+R HTA
Sbjct: 2876 SVEAASNGLYTATNELCIASVKAKSASADLQSTVLAMRDCAYEASVALSAFSRVTRGHTA 2935

Query: 1599 LTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAA 1658
            LTSE GSMLEEVL ITE LHDVHSLGKEAAA++HSLMEDLSKAN VLLPL+SVLSKDVAA
Sbjct: 2936 LTSECGSMLEEVLVITEGLHDVHSLGKEAAAVHHSLMEDLSKANMVLLPLESVLSKDVAA 2995

Query: 1659 MSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLA 1718
            M+DA+T ERETK+E+SPIHGQAIYQSYCLR+R+AC   KPL+PSL  SVKGLYSMLTRLA
Sbjct: 2996 MTDAMTRERETKLEISPIHGQAIYQSYCLRIREACPAFKPLVPSLTFSVKGLYSMLTRLA 3055

Query: 1719 RTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIK 1778
            RTASLHAGNLHKALEGLGESQEV+SQ ++LSR++L A+D+SQ   K RE FS SD G+  
Sbjct: 3056 RTASLHAGNLHKALEGLGESQEVRSQEINLSRTNL-ASDASQSGNKDREIFSRSDEGN-A 3113

Query: 1779 DDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELTGQHPHGLNQ- 1837
            +D LGV+G+SLQDKGWISPPDS+YSSSSES I S EASLPDS   P E+  +  +G N  
Sbjct: 3114 EDLLGVAGLSLQDKGWISPPDSVYSSSSESVIISDEASLPDSHTAPAEMMARLSYGSNSR 3173

Query: 1838 ---------------------DSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTG 1876
                                 + GQS SK TE NN+D+ SVK   +EP E+ KA  SP  
Sbjct: 3174 EGTDYLNSVSSSGTDFQEISLNCGQSESKYTEYNNSDASSVKSPTNEPSEHLKAAASPKN 3233

Query: 1877 EAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAY 1936
            E+++V                                           T +R+ARGKNAY
Sbjct: 3234 ESITV-----------------------------------------IDTSNRIARGKNAY 3252

Query: 1937 AISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
            AISVLRRVEMKLDGRDI +NR +SIAEQVD+LLKQATS+DNLCNMYEGWTPWI
Sbjct: 3253 AISVLRRVEMKLDGRDIADNREISIAEQVDYLLKQATSIDNLCNMYEGWTPWI 3305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541123|ref|XP_003539032.1| PREDICTED: serine/threonine-protein kinase SMG1 [Glycine max]

 Score = 2744 bits (7114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1392/2032 (68%), Positives = 1638/2032 (80%), Gaps = 89/2032 (4%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAK SP  IVYPTLVDVNAYEE+PSEEL H+LGCLRELYPRL+QDV+LMINELGN+TVL
Sbjct: 1735 MLAKQSPCSIVYPTLVDVNAYEEKPSEELHHVLGCLRELYPRLVQDVQLMINELGNVTVL 1794

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDL  DVMRRINVLKEEAARIAEN TLSQ+EK KIN+A+YSAMMAPIVVAL
Sbjct: 1795 WEELWLSTLQDLQTDVMRRINVLKEEAARIAENVTLSQNEKNKINSARYSAMMAPIVVAL 1854

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHE WF EE+ +QLKSAI++FK PPAS+AA+GDVWRPFD+IAASLAS
Sbjct: 1855 ERRLASTSRKPETPHEAWFQEEYKDQLKSAIVSFKIPPASSAAIGDVWRPFDSIAASLAS 1914

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            +QRKSSVSL EVAP L+LLSSSDVPMPG EKQ+     D G    L+G+VTIASF E+V+
Sbjct: 1915 YQRKSSVSLREVAPHLALLSSSDVPMPGLEKQMKVP--DSGKATDLQGVVTIASFHEQVT 1972

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            ILSTKTKPKKL ILG                        LLQA+N FL SS +  S+SL 
Sbjct: 1973 ILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDARIMQLLQAINGFLHSSSSACSNSLS 2032

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISGRAGLIQWV NV+SIYSVFK+WQ R QLAQF A+G  N KSS PPPVPRP
Sbjct: 2033 IRYYSVTPISGRAGLIQWVGNVVSIYSVFKAWQTRVQLAQFLALGPANTKSSAPPPVPRP 2092

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGI+RVISRRDWPH+VK KVLLDLMKEVPR LL+QE+WCASEG+KA
Sbjct: 2093 SDMFYGKIIPALKEKGIKRVISRRDWPHEVKCKVLLDLMKEVPRHLLYQELWCASEGYKA 2152

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            FS K+KRYS SVAAMSMVGH+LGLGDRHLDNIL+DF +GDIVHIDYNVCFDKGQRLK+PE
Sbjct: 2153 FSSKMKRYSGSVAAMSMVGHVLGLGDRHLDNILIDFCNGDIVHIDYNVCFDKGQRLKIPE 2212

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQ IEAALGLTGIEG+F++NCE V+ VLRKNKDILLMLLEVFVWDPL+EWTRGD
Sbjct: 2213 IVPFRLTQMIEAALGLTGIEGSFKSNCETVIGVLRKNKDILLMLLEVFVWDPLVEWTRGD 2272

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVL 578
            FHD+AAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHD LL +LPAVE ALE FAD+L
Sbjct: 2273 FHDEAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDQLLTSLPAVESALESFADIL 2332

Query: 579  SQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVT 638
            + YELAS L+ RADQERS L+L ETS KS++AEA  N+EKIRASFE+QAREFAQAKA+V 
Sbjct: 2333 NHYELASTLYCRADQERSGLILRETSAKSILAEATSNSEKIRASFEIQAREFAQAKAMVA 2392

Query: 639  EKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEP 698
            EKAQEA  W EQHGRILDALR NLIPEIN   KL+    A SLTSAV VAGVP ++VPEP
Sbjct: 2393 EKAQEAMAWAEQHGRILDALRCNLIPEINVSFKLNNMEAALSLTSAVTVAGVPLTVVPEP 2452

Query: 699  TQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQL 758
            TQ QCHDID++VSQ +AEL  GL+S   +LQAYSLALQRILPLNYL+T+AVH WAQVLQL
Sbjct: 2453 TQAQCHDIDREVSQFVAELGDGLTSATTSLQAYSLALQRILPLNYLSTSAVHNWAQVLQL 2512

Query: 759  SANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAEL 818
            S NA S +ILSLARRQA+ELI + H D+ DSIK +HDDL  +VEKY VEIEK+EKECAE+
Sbjct: 2513 SINALSSEILSLARRQASELIAKFHVDSIDSIKCSHDDLCFRVEKYAVEIEKLEKECAEI 2572

Query: 819  VNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQDE 878
             +SIGSE+ESK KDR L AFMK+M+S GL+RKEDV SS QS  L           G+ +E
Sbjct: 2573 ESSIGSESESKTKDRCLSAFMKFMQSIGLLRKEDVMSSVQSRPL-----------GELEE 2621

Query: 879  NKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVEKCI 938
             +EK LS+LN+AV+ LY++VK R+ +I++D +GG    N +Q D GT+F EF+EQVEKC 
Sbjct: 2622 EREKALSILNIAVSSLYNDVKHRIQNIYNDMSGGRNQYNMLQNDSGTIFAEFEEQVEKCN 2681

Query: 939  LVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTEVVLPD 998
            LV  FVN+L Q IG+D    D +     +  E NW SIFK  L++CK LV QMTEVVLP+
Sbjct: 2682 LVTEFVNDLCQFIGKDTPSVDINKVRSKFSSESNWVSIFKAILISCKGLVSQMTEVVLPN 2741

Query: 999  VMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGLITEQ 1058
            V+R+ +S NSEVMDAFGL+SQ+RGSI+T LEQLVEVE+ERASL+ELEQ+YFVKVGLITEQ
Sbjct: 2742 VIRAAVSLNSEVMDAFGLISQVRGSIETALEQLVEVEMERASLIELEQNYFVKVGLITEQ 2801

Query: 1059 QLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEADIRN 1118
            QLALEEAAVKGRDHLSWEEAEELASQEEAC+A+L++LHQTWNQRD+R+SSL+K+EADI+N
Sbjct: 2802 QLALEEAAVKGRDHLSWEEAEELASQEEACRAQLDQLHQTWNQRDVRTSSLIKREADIKN 2861

Query: 1119 ALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGSIPYG 1178
            ALVS    FQS++ +EE RE HILRSKALLA L KPF+ELES+D  L++           
Sbjct: 2862 ALVSVNCQFQSLVGSEEERELHILRSKALLAALFKPFLELESMDIMLSA----------- 2910

Query: 1179 TPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFD 1238
                AD+              G L + HSFFIWK+G+ID FLD+C+HDVA+SV+QNLGFD
Sbjct: 2911 ----ADV--------------GDLLDNHSFFIWKIGVIDYFLDACIHDVASSVEQNLGFD 2952

Query: 1239 QLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADDAKKDT 1298
            Q  N +KK+LE+QLQ+H+G YLKER+AP +L  LDKE EHLK+LTES+KEL  D  KKD 
Sbjct: 2953 QSLNFMKKRLEIQLQKHIGHYLKERIAPSLLTCLDKENEHLKQLTESSKELALDQVKKD- 3011

Query: 1299 GAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMHDATLT 1358
            GA ++V LML EYCNAHETARAA+SAASLMK+QVNE +EAL KT+LE+VQMEWMHD +L 
Sbjct: 3012 GAAKKVLLMLEEYCNAHETARAAKSAASLMKKQVNELKEALRKTALEVVQMEWMHDVSLN 3071

Query: 1359 PSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERSSLTAE 1418
            PSYN RI F+KY  +DD +Y IILNLSR KL++ +QS+V+KI  S++ LQ+CER+SL AE
Sbjct: 3072 PSYNRRIRFEKYLDTDDSLYTIILNLSRSKLMDNIQSAVSKITTSMDCLQSCERNSLIAE 3131

Query: 1419 GQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVNICMS 1478
            GQLERAM WACGGPNSS++GN+STK SGIPPEFH+H+  RRQ+LWE+REKAS IV +C+S
Sbjct: 3132 GQLERAMAWACGGPNSSSSGNTSTKNSGIPPEFHEHIKTRRQILWESREKASDIVKLCVS 3191

Query: 1479 VLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEWKLAQS 1538
            VL+FEASRDG    PG+ YP R  VD ++WQQVYLNA+T+L+V +HS+T  EQEWKLAQ 
Sbjct: 3192 VLEFEASRDGFLLIPGQPYPFRSSVDGKTWQQVYLNALTRLDVTFHSYTRTEQEWKLAQC 3251

Query: 1539 SMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRVSRVHTA 1598
            ++EAASNGLY+ATNELCIASLKAKSASGDLQSTVL+MRDCAYEAS AL+AF RVSR+HTA
Sbjct: 3252 TVEAASNGLYTATNELCIASLKAKSASGDLQSTVLSMRDCAYEASVALSAFARVSRIHTA 3311

Query: 1599 LTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVLSKDVAA 1658
            LTSESGSMLEEVLAITED+HDV++LGKEAAAI+ SLME LSKANA+L PL+SVL+KDVAA
Sbjct: 3312 LTSESGSMLEEVLAITEDIHDVYNLGKEAAAIHLSLMEGLSKANAILFPLESVLTKDVAA 3371

Query: 1659 MSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYSMLTRLA 1718
            M+DAI  E E K E+S IHGQAIYQSYCLR+R+AC   KPL PSL S+VKGLYS+L RLA
Sbjct: 3372 MADAIARESEIKKEISHIHGQAIYQSYCLRIREACHTFKPLAPSLTSAVKGLYSLLARLA 3431

Query: 1719 RTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGREAFSGSDSGSIK 1778
            RTA++HAGNLHKALEG+G+SQEVKS+ ++LSRSD    D+ +FD+K  E+ S S+     
Sbjct: 3432 RTANVHAGNLHKALEGIGDSQEVKSEDIALSRSDGGGGDAVEFDDKEGESLSRSEDDK-T 3490

Query: 1779 DDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPV---ELTGQ----- 1830
            DDF+G S +SL+DKGW+SPPDSIY SSS S I+  E SLPDS N+     +L  Q     
Sbjct: 3491 DDFIGFSRLSLEDKGWVSPPDSIYCSSSGSDISLAEVSLPDSLNDSAGNKDLLSQGSGSR 3550

Query: 1831 ------HPHGLNQDSGQSV-------SKRTEVNNTDSGSVKFTVDEPIEYFKAQESPTGE 1877
                  H   L+Q   + +       S   E +   +GSVK +++E  E+ +A      +
Sbjct: 3551 IPTGYMHTTLLSQTDVEQISPFELSESSPVETDLNRAGSVK-SINEATEHAEAISLSGDK 3609

Query: 1878 AVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGKNAYA 1937
            +V++  G+SQ   N +  KF  +DE+ S  +V    E++E   P  +  +RV RGKNAYA
Sbjct: 3610 SVAIP-GNSQIPSNENLDKFDGEDELLSAKEVKNAAEHHEAPDPYINANTRVGRGKNAYA 3668

Query: 1938 ISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
            +SVLRRVE+K+DGRDI ENR +  AEQVD+LLKQATSVDNLCNMYEGWTPWI
Sbjct: 3669 LSVLRRVEVKIDGRDISENREIGTAEQVDYLLKQATSVDNLCNMYEGWTPWI 3720

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473157|ref|XP_003606863.1| Serine/threonine protein kinase atr [Medicago truncatula] gi|355507918|gb|AES89060.1| Serine/threonine protein kinase atr [Medicago truncatula]

 Score = 2632 bits (6823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1350/1976 (68%), Positives = 1599/1976 (80%), Gaps = 71/1976 (3%)

Query: 36   LRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENAT 95
            LRELYPRL+QDVELMINELGN+TVLWEELWLSTLQDLH DVMRRINVLKEEAARIAENAT
Sbjct: 1838 LRELYPRLVQDVELMINELGNVTVLWEELWLSTLQDLHTDVMRRINVLKEEAARIAENAT 1897

Query: 96   LSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFK 155
            LS +EK+KIN+A+YSAMMAPIVVALERRLASTSRKPETPHE WF EE+   LKSAI++FK
Sbjct: 1898 LSHNEKRKINSARYSAMMAPIVVALERRLASTSRKPETPHEAWFQEEYKNPLKSAIISFK 1957

Query: 156  TPPASAAALGDVWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVAT 215
            TPP+S++ALGDVWRPFD+IAASLAS+QRKSS+SL EVAP+L+LLS+SDVPMPG EKQ+  
Sbjct: 1958 TPPSSSSALGDVWRPFDSIAASLASYQRKSSISLQEVAPRLALLSTSDVPMPGLEKQMKV 2017

Query: 216  SESDGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILG-------------------- 255
               D G    L+G+VTIASF ++V+ILSTKTKPKKL ILG                    
Sbjct: 2018 P--DSGKATDLQGVVTIASFLQQVTILSTKTKPKKLGILGSDGQKYTYLLKGREDLRLDA 2075

Query: 256  --QMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHR 313
                LLQA+N  L SS +TRS SLGIRYYSVTPISGRAGLIQWVDNV+SIYSVFKSWQ R
Sbjct: 2076 RIMQLLQAINGLLISSSSTRSKSLGIRYYSVTPISGRAGLIQWVDNVVSIYSVFKSWQTR 2135

Query: 314  AQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVL 373
            AQ AQ  A+G  N KSS PPPVPRPSDMFYGKIIPALKEKGI+RVISRRDWPH+VK KVL
Sbjct: 2136 AQHAQCVALGTANTKSSAPPPVPRPSDMFYGKIIPALKEKGIKRVISRRDWPHEVKYKVL 2195

Query: 374  LDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLD 433
            LDLMKEVPR LLHQE+WCASEG+KAF+ K+KRYS S+AAMSMVGH+LGLGDRHLDNIL+D
Sbjct: 2196 LDLMKEVPRHLLHQELWCASEGYKAFNSKMKRYSGSLAAMSMVGHVLGLGDRHLDNILID 2255

Query: 434  FSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLR 493
            F  GDIVHIDYNVCFDKGQRLK+PEIVPFRLT  IEAALGLTGIEGTFRANCEAV+ +L+
Sbjct: 2256 FCGGDIVHIDYNVCFDKGQRLKIPEIVPFRLTHMIEAALGLTGIEGTFRANCEAVIGILK 2315

Query: 494  KNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPL 553
            KNKD LLMLLEVFVWDPL+EWTRGDFHD+AAIGGEERKGMELAVSLSLFASRVQEIRV L
Sbjct: 2316 KNKDTLLMLLEVFVWDPLVEWTRGDFHDEAAIGGEERKGMELAVSLSLFASRVQEIRVSL 2375

Query: 554  QEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEAN 613
            QEHHD LL +LPAVE  LERFAD L+QYE+AS+++++ADQERS+L LHETS KS+V EA 
Sbjct: 2376 QEHHDQLLTSLPAVESVLERFADALNQYEIASSIYHQADQERSSLTLHETSAKSIVGEAT 2435

Query: 614  CNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLS 673
             N+EKIR SFE+QAREFAQAKA+V EKAQEA TW EQHGRILDALR +LIPEI+S  KLS
Sbjct: 2436 RNSEKIRVSFEIQAREFAQAKAMVAEKAQEAMTWAEQHGRILDALRCSLIPEISSYFKLS 2495

Query: 674  GSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSL 733
                A SLTSAV +AGVP ++VPEPTQVQCHDID++VSQ IAELD GL+S    LQAYSL
Sbjct: 2496 DIEVALSLTSAVTLAGVPLTVVPEPTQVQCHDIDREVSQFIAELDDGLTSAITCLQAYSL 2555

Query: 734  ALQRILPLNYLTTTAVHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQN 793
            ALQRILPLNYL+T+AVH WAQVL+LS NA S DILSLARRQA+EL  + H D+ DSIK++
Sbjct: 2556 ALQRILPLNYLSTSAVHCWAQVLELSVNALSSDILSLARRQASELFAKFHVDSTDSIKRS 2615

Query: 794  HDDLRLKVEKYGVEIEKVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDV 853
            +DDL L+V+KY +EIEK+E EC E+ +SIG E+ES  KD  L AFMK+M+S  L+R+E  
Sbjct: 2616 YDDLCLRVDKYALEIEKLENECTEIESSIGLESESITKDHLLSAFMKFMQSMDLLRREGG 2675

Query: 854  SSSYQSGQLKNDGRKDAGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGI 913
             SS QS   + DG     L G+ +E +EK+L++LN+AV+  Y+E+K RVL+I+SD +GG 
Sbjct: 2676 MSSVQS---RYDGTNSTRLLGELEEEREKVLTILNIAVSSFYNEIKHRVLNIYSDLSGGR 2732

Query: 914  KGNNRMQLDFGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNW 973
               N ++ D+GT+F  F+EQVEKC L+  FVN+L Q IG+D+   D + +   +  E NW
Sbjct: 2733 NQYNMLRNDYGTIFAWFEEQVEKCNLLTEFVNDLRQFIGKDISSIDQNKDNSKFSSESNW 2792

Query: 974  ASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVE 1033
             SIFKT L +CK L+ QMTEVVLPDV+RS +S  SEVMDAFGL+SQ+RGSI+T LEQ+VE
Sbjct: 2793 VSIFKTILTSCKGLISQMTEVVLPDVIRSAVSLKSEVMDAFGLISQVRGSIETALEQVVE 2852

Query: 1034 VELERASLVELEQSYFVKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELN 1093
            VE+ERASL ELEQ+YFVKVGLITEQQLALE+AAVKGRDHLSWEEAEELASQEEAC+A+L+
Sbjct: 2853 VEMERASLFELEQNYFVKVGLITEQQLALEQAAVKGRDHLSWEEAEELASQEEACRAQLD 2912

Query: 1094 ELHQTWNQRDMRSSSLMKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVK 1153
            ELHQTW+QRD+R+SSL+K+EADI+N+LVS +  FQS++  EE  E HILRSKALLA LVK
Sbjct: 2913 ELHQTWSQRDVRTSSLLKREADIKNSLVSVKCQFQSLVGVEEKSELHILRSKALLAALVK 2972

Query: 1154 PFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKM 1213
            PF+ELES D  L+    SV +       LAD INSG SISE +W  G L + HSFFIWK+
Sbjct: 2973 PFLELESSDIMLSPADGSVATPSSKFHTLADFINSGNSISEYVWKVGGLLDDHSFFIWKV 3032

Query: 1214 GIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLD 1273
            G+IDSF+D+C+HDVA+SV+QNLGFDQ  N +KKKLE+QLQ+H+  YLKERVAP +LA LD
Sbjct: 3033 GVIDSFVDACIHDVASSVEQNLGFDQSLNFMKKKLEIQLQKHISQYLKERVAPSLLACLD 3092

Query: 1274 KEIEHLKKLTESTKELTADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVN 1333
            +E+EHLK+LT+S+KEL  D  KKD GA ++V  ML EYCNAHETARAA+SAASLMKRQV+
Sbjct: 3093 REMEHLKQLTDSSKELALDQVKKD-GAAKKVLHMLEEYCNAHETARAAKSAASLMKRQVS 3151

Query: 1334 EFREALHKTSLEIVQMEWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETL 1393
            E +EAL KT+LE+VQMEWMHD  L PSYN RIT++KY  + D +YPIILNLSR KLLE +
Sbjct: 3152 ELKEALRKTTLEVVQMEWMHDDILNPSYNRRITYEKYLDTGDSLYPIILNLSRSKLLENI 3211

Query: 1394 QSSVTKIARSVESLQACERSSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHD 1453
            QS+++KI  S +SLQ+CE+ SL AEGQLERAMGWACGGPNSS++GNSSTK SGIPPEFH+
Sbjct: 3212 QSAISKITSSTDSLQSCEQPSLIAEGQLERAMGWACGGPNSSSSGNSSTKNSGIPPEFHE 3271

Query: 1454 HLMRRRQLLWEAREKASKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYL 1513
            H+ +RR++LWE+REKAS IV +CMSVL+FEASRDG F  PG+ YP R GVD  +WQQ+YL
Sbjct: 3272 HIKKRREILWESREKASDIVKLCMSVLEFEASRDGYFLIPGQSYPFRSGVDRNTWQQLYL 3331

Query: 1514 NAVTKLEVAYHSFTCAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVL 1573
            N++T+L+V +HS+T  EQEWKLAQ ++EAASNGLY+ATNELCIASLKAKSASG+LQSTVL
Sbjct: 3332 NSLTRLDVTFHSYTRTEQEWKLAQCTVEAASNGLYTATNELCIASLKAKSASGELQSTVL 3391

Query: 1574 TMRDCAYEASAALTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHS 1633
            +MRDCAYEAS AL+AF +VSR+HTALTSE GSMLEEVLAITED+HDV++LGKEAA+I+ S
Sbjct: 3392 SMRDCAYEASVALSAFAQVSRMHTALTSECGSMLEEVLAITEDVHDVYNLGKEAASIHLS 3451

Query: 1634 LMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDAC 1693
            LME+LS+ NA+LLPL+SVLSKD AAM+DAI  E ETK E+S IHGQAIYQSY LR+R++C
Sbjct: 3452 LMENLSEVNAILLPLESVLSKDAAAMADAIARESETKKEISHIHGQAIYQSYSLRIRESC 3511

Query: 1694 QLLKPLLPSLMSSVKGLYSMLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDL 1753
            Q  KP +PSL S+VKGLYS+LTRLARTA+LHAGNLHKALEG+GESQEVKSQ + LS SD 
Sbjct: 3512 QTFKPFVPSLTSAVKGLYSLLTRLARTANLHAGNLHKALEGIGESQEVKSQDIVLSTSDA 3571

Query: 1754 TAADSSQFDEKGREAFSGSDSGSIKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSG 1813
               D+ +FD K  E+ S SD     DD +G S +SL++KGWISPPDS + SSSES  TS 
Sbjct: 3572 GGGDAVEFDSKEGESLSRSDDDK-TDDIIGFSRLSLEEKGWISPPDSSFCSSSESDSTSA 3630

Query: 1814 EASLPDSSNNPVELTGQHPHGLNQDSGQSVSKRTEVNNTDSGSVKFTVDEPIEYFKAQES 1873
            E SLPDS N+  E T      L+Q S +S     ++N+ +  S+K T +E  E+  A   
Sbjct: 3631 EVSLPDSLNDSAENTDM----LSQVS-ESFPLEADLNSAE--SLKLT-NEATEHPSAMPF 3682

Query: 1874 PTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRVARGK 1933
            P+ ++V+ +  S  P   N + KF                                  GK
Sbjct: 3683 PSEKSVASSAVSQNPSNENLD-KFD---------------------------------GK 3708

Query: 1934 NAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
            NAYA+SVLRRVEMK+DGRDI E R +SIAEQVD+LLKQATS DNLCNMYEGWTPWI
Sbjct: 3709 NAYALSVLRRVEMKIDGRDISERREISIAEQVDYLLKQATSADNLCNMYEGWTPWI 3764

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455326|ref|XP_004145404.1| PREDICTED: uncharacterized protein LOC101206782 [Cucumis sativus] gi|449471274|ref|XP_004153262.1| PREDICTED: uncharacterized protein LOC101222679 [Cucumis sativus]

 Score = 2595 bits (6725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1330/2040 (65%), Positives = 1601/2040 (78%), Gaps = 66/2040 (3%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAK SPW +VYPTLVDVN+YEE+PSEELQHILG L+E YPRLI+DV+LMI EL N+TVL
Sbjct: 1907 MLAKQSPWSVVYPTLVDVNSYEEKPSEELQHILGSLKEHYPRLIEDVQLMIKELENVTVL 1966

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDL  DVMRRINVLKEEAARIA N TLSQSEK KINAAKYSAMMAPIVVAL
Sbjct: 1967 WEELWLSTLQDLQTDVMRRINVLKEEAARIAANVTLSQSEKDKINAAKYSAMMAPIVVAL 2026

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHE WFHEE+ EQLKSAI  FK PP+SAAAL DVWRPFD+IAASLAS
Sbjct: 2027 ERRLASTSRKPETPHETWFHEEYKEQLKSAIFTFKNPPSSAAALVDVWRPFDDIAASLAS 2086

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            +QRKSS+SL EVAP L+LLSSSDVPMPGFEK V  SE+D  + + L G VTI SFSE+V+
Sbjct: 2087 YQRKSSISLKEVAPMLTLLSSSDVPMPGFEKHVIYSEADRSIGSNLSGTVTIGSFSEQVT 2146

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            ILSTKTKPKKLVILG                        +LQA+NSFL SS +T   SL 
Sbjct: 2147 ILSTKTKPKKLVILGSDGETYTYLLKGREDLRLDARIMQMLQAINSFLYSSHSTYGQSLS 2206

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISGRAGLIQWV+NV+S+Y+VFKSWQHR Q+AQ SA+GA N KSSVPP +PRP
Sbjct: 2207 IRYYSVTPISGRAGLIQWVNNVMSVYTVFKSWQHRVQVAQLSAVGASNLKSSVPPQLPRP 2266

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGIRRVISRRDWPH+VKRKVLLDLMKEVP+QLL+QE+WCASEGFKA
Sbjct: 2267 SDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEVPKQLLYQELWCASEGFKA 2326

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            FSLKLKRY+ SVAAMSMVGHILGLGDRHLDNIL+DFS+GD+VHIDYNVCFDKGQ+LKVPE
Sbjct: 2327 FSLKLKRYAGSVAAMSMVGHILGLGDRHLDNILMDFSTGDVVHIDYNVCFDKGQKLKVPE 2386

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQT+EAALGLTGIEGTFRANCEAV+ VLRKNKDILLMLLEVFVWDPL+EWTRGD
Sbjct: 2387 IVPFRLTQTMEAALGLTGIEGTFRANCEAVLEVLRKNKDILLMLLEVFVWDPLVEWTRGD 2446

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVL 578
            FHDDA IGGEER+GMELAVSLSLFASRVQEIRVPLQEHHDLLLA LPA E +LE FA+VL
Sbjct: 2447 FHDDATIGGEERRGMELAVSLSLFASRVQEIRVPLQEHHDLLLAALPAAESSLEGFANVL 2506

Query: 579  SQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVT 638
            + YELAS LFY+A+QERS++VL ETS KS+VA+A  +AEK+R  FE+QARE AQ KA+V+
Sbjct: 2507 NHYELASTLFYQAEQERSSIVLRETSAKSVVADATSSAEKVRTLFEMQARELAQGKAIVS 2566

Query: 639  EKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEP 698
            EKAQEA+TW+EQHGR+LD +R NLIPEI+ C+ +    +A SL SAV VAGVP ++VPEP
Sbjct: 2567 EKAQEASTWIEQHGRVLDNIRSNLIPEIDMCLNMRAIGEALSLISAVTVAGVPVTVVPEP 2626

Query: 699  TQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQL 758
            TQVQCHDID+++SQLIA L  GLSS    +Q YS++LQR LPLNY+TT+ VHGWAQ LQL
Sbjct: 2627 TQVQCHDIDREISQLIAALSDGLSSAIATIQVYSVSLQRFLPLNYVTTSVVHGWAQALQL 2686

Query: 759  SANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAEL 818
            S NA S DI+SLARRQATEL+++++ DN+DS++ +HD++ ++V+KY  EI K+E+EC EL
Sbjct: 2687 SKNALSSDIISLARRQATELMMKVN-DNNDSVQVSHDNMCVQVDKYAKEIAKIEEECTEL 2745

Query: 819  VNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGK--- 875
            + SIG+ETE KAKDR L  F KYM SAGLV++E +  S Q G++ +DG+KD  ++ +   
Sbjct: 2746 LTSIGTETELKAKDRLLSTFTKYMTSAGLVKREAI-PSLQMGRVTHDGKKDINMQLELVA 2804

Query: 876  QDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVE 935
            + E KEKLLS +NVA+  LY E + ++LDI +D   G   N     DF  +F   +EQVE
Sbjct: 2805 EKEKKEKLLSSINVALDILYCEARGKILDILNDMNDGRLVNRTTSHDFNVVFSNLEEQVE 2864

Query: 936  KCILVAGFVNELWQSIGRDMYDNDADIECPNY-HFERNWASIFKTSLLACKTLVGQMTEV 994
            KC+L++ F +EL   I   +   +   +  +  H  RNW S F     + K L+G+MT+ 
Sbjct: 2865 KCMLLSEFHSELLDLIDVKVLSVENKYKSWHRNHSHRNWTSTFAVMFSSFKDLIGKMTDA 2924

Query: 995  VLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGL 1054
            VLPD++RS IS NSEVMDAFGLVSQIRGSIDT L+Q +EV+LE+ASL+ELE++YF+ VGL
Sbjct: 2925 VLPDIIRSAISVNSEVMDAFGLVSQIRGSIDTALDQFLEVQLEKASLIELEKNYFINVGL 2984

Query: 1055 ITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEA 1114
            ITEQQLALEEAAVKGRDHLSWEEAEELAS+EEAC+AEL++LHQTWNQRD+RSSSL K+EA
Sbjct: 2985 ITEQQLALEEAAVKGRDHLSWEEAEELASEEEACRAELHQLHQTWNQRDVRSSSLAKREA 3044

Query: 1115 DIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGS 1174
            ++ +AL SSE  FQS+ISA    E    +   LLA LVKPF ELES+D+  +S   S  S
Sbjct: 3045 NLVHALASSECQFQSLISAA--VEETFTKGNTLLAKLVKPFSELESIDEIWSSSGVSFSS 3102

Query: 1175 IPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQN 1234
            I  G P L+D+++SG  ISE IW FG   + HSFFIWK+ ++DSFLDSC+H++A++VDQN
Sbjct: 3103 ISNGIPTLSDVVSSGYPISEYIWRFGGQLSSHSFFIWKICVVDSFLDSCIHEIASAVDQN 3162

Query: 1235 LGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTA--D 1292
             GFDQLFNV+KKKLE+QLQE++  YLKER  P  LA+LD+E EHLK L           D
Sbjct: 3163 FGFDQLFNVMKKKLELQLQEYIFRYLKERGVPAFLAWLDREREHLKPLEARKDNFHEHHD 3222

Query: 1293 DAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWM 1352
            +  KD   + R++ ML E+CN HETARAARS  SLM++QVNE +E L KTSLEI+QMEW+
Sbjct: 3223 EQIKDLEFIERIRYMLQEHCNVHETARAARSTVSLMRKQVNELKETLQKTSLEIIQMEWL 3282

Query: 1353 HDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACER 1412
            HD +LTPS  +R T QK+ S +D +YPIIL+LSR +LL +L+S+ ++IA+S+E L+ACER
Sbjct: 3283 HDNSLTPSQFNRATLQKFLSVEDRLYPIILDLSRSELLGSLRSATSRIAKSIEGLEACER 3342

Query: 1413 SSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKI 1472
             SLTAE QLERAMGWACGGPN+    N+S K SGIPP+FHDH++RRRQLLWE REK S I
Sbjct: 3343 GSLTAEAQLERAMGWACGGPNTGPVINTS-KASGIPPQFHDHILRRRQLLWETREKVSDI 3401

Query: 1473 VNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQE 1532
            + ICMS+L+FEASRDG+ + PG+ +      D+R+WQQ YLNA+T+L+V+YHSF+  EQE
Sbjct: 3402 IKICMSILEFEASRDGMLQFPGD-HAFSTDSDSRAWQQAYLNAITRLDVSYHSFSRTEQE 3460

Query: 1533 WKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRV 1592
            WKLA+ SMEAASN LY+ATN L IA+LK KSASGDLQST+L+MRDCAYE+S AL+AFG V
Sbjct: 3461 WKLAERSMEAASNELYAATNNLRIANLKMKSASGDLQSTLLSMRDCAYESSVALSAFGSV 3520

Query: 1593 SRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVL 1652
            SR HTALTSE GSMLEEVLAITEDLHDVH+LGKEAA I+  L+ED++KAN+VLLPL+++L
Sbjct: 3521 SRNHTALTSECGSMLEEVLAITEDLHDVHNLGKEAAVIHRQLIEDIAKANSVLLPLEAML 3580

Query: 1653 SKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYS 1712
            SKDVAAM DA+  ERE KME+SPIHGQAIYQSYCLR+R+A Q+ KPL+PSL  SVKGLYS
Sbjct: 3581 SKDVAAMIDAMAREREIKMEISPIHGQAIYQSYCLRIREAYQMFKPLVPSLTLSVKGLYS 3640

Query: 1713 MLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTA-ADSSQFDEKGR---EA 1768
            M T+LARTA LHAGNLHKALEGLGESQE+KS+G+ +++S   +  D+  F EK R     
Sbjct: 3641 MFTKLARTAGLHAGNLHKALEGLGESQEIKSEGIHITKSQFNSEVDAVDF-EKERESLSL 3699

Query: 1769 FSGSDSGSIKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELT 1828
                 SG I D    ++ +SLQDK W+SPPDS  SSSSES  T+  +S PDSSN+  E  
Sbjct: 3700 SDSESSGDIPD----ITRLSLQDKEWLSPPDSFCSSSSESDFTT--SSFPDSSNDLTEDM 3753

Query: 1829 GQHPHGLNQDSGQSVSKRTEVNNTDSGSV-------------------KFTVDEPIEYFK 1869
            GQH +G +    + + K T  + TD G +                   K + +E     K
Sbjct: 3754 GQHYNGSSDREARVIPKITSFSQTDVGKMLRLEESETKSTDGSQTCFRKLSTNEFNGGIK 3813

Query: 1870 AQESPTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRV 1929
               +P  E++ V   +S PL    E +   +  V+S +K  +E+EN E         SR 
Sbjct: 3814 IVATPPDESIEVPAIASHPLNETVE-RLEEESGVTSSDK-RLEDENQEAPPAQKAAWSRA 3871

Query: 1930 ARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
            +RG+NAYA SVLRRVEMKL+GRD V+NR LSIAEQVD+LLKQATSVDNLCNMYEGWTPWI
Sbjct: 3872 SRGRNAYATSVLRRVEMKLNGRDNVDNRELSIAEQVDYLLKQATSVDNLCNMYEGWTPWI 3931

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511923|ref|XP_004164090.1| PREDICTED: uncharacterized LOC101222679 [Cucumis sativus]

 Score = 2499 bits (6476), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1295/2040 (63%), Positives = 1558/2040 (76%), Gaps = 107/2040 (5%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAK SPW +VYPTLVDVN+YEE+PSEELQHILG L+E YPRLI+DV+LMI EL N+TVL
Sbjct: 1882 MLAKQSPWSVVYPTLVDVNSYEEKPSEELQHILGSLKEHYPRLIEDVQLMIKELENVTVL 1941

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDL  DVMRRINVLKEEAARIA N TLSQSEK KINAAKYSAMMAPIVVAL
Sbjct: 1942 WEELWLSTLQDLQTDVMRRINVLKEEAARIAANVTLSQSEKDKINAAKYSAMMAPIVVAL 2001

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHE WFHEE+ EQLKSAI  FK PP+SAAAL DVWRPFD+IAASLAS
Sbjct: 2002 ERRLASTSRKPETPHETWFHEEYKEQLKSAIFTFKNPPSSAAALVDVWRPFDDIAASLAS 2061

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            +QRKSS+SL EVAP L+LLSSSDVPMPGFEK V  SE+D  + + L G VTI SFSE+V+
Sbjct: 2062 YQRKSSISLKEVAPMLTLLSSSDVPMPGFEKHVIYSEADRSIGSNLSGTVTIGSFSEQVT 2121

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            ILSTKTKPKKLVILG                        +LQA+NSFL SS +T   SL 
Sbjct: 2122 ILSTKTKPKKLVILGSDGETYTYLLKGREDLRLDARIMQMLQAINSFLYSSHSTYGQSLS 2181

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISGRAGLIQWV+NV+S+Y+VFKSWQHR Q+AQ SA+GA N KSSVPP +PRP
Sbjct: 2182 IRYYSVTPISGRAGLIQWVNNVMSVYTVFKSWQHRVQVAQLSAVGASNLKSSVPPQLPRP 2241

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGIRRVISRRDWPH+VKRKVLLDLMKEVP+QLL+QE+WCASEGFKA
Sbjct: 2242 SDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEVPKQLLYQELWCASEGFKA 2301

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            FSLKLKRY+ SVAAMSMVGHILGLGDRHLDNIL+DFS+GD+VHIDYNVCFDKGQ+LKVPE
Sbjct: 2302 FSLKLKRYAGSVAAMSMVGHILGLGDRHLDNILMDFSTGDVVHIDYNVCFDKGQKLKVPE 2361

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQT+EAALGLTGIEGTFRANCEAV+ VLRKNKDILLMLLEVFVWDPL+EWTRGD
Sbjct: 2362 IVPFRLTQTMEAALGLTGIEGTFRANCEAVLEVLRKNKDILLMLLEVFVWDPLVEWTRGD 2421

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVL 578
            FHDDA IGGEER+GMELAVSLSLFASRVQEIRVPLQEHHDLLLA LPA E +LE FA+VL
Sbjct: 2422 FHDDATIGGEERRGMELAVSLSLFASRVQEIRVPLQEHHDLLLAALPAAESSLEGFANVL 2481

Query: 579  SQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVT 638
            + YELAS LFY+A+QERS++VL ETS KS+VA+A  +AEK+R  FE+QARE AQ KA+V+
Sbjct: 2482 NHYELASTLFYQAEQERSSIVLRETSAKSVVADATSSAEKVRTLFEMQARELAQGKAIVS 2541

Query: 639  EKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEP 698
            EKAQEA+TW+EQHGR+LD +R NLIPEI+ C+ +    +A SL SAV VAGVP ++VPEP
Sbjct: 2542 EKAQEASTWIEQHGRVLDNIRSNLIPEIDMCLNMRAIGEALSLISAVTVAGVPVTVVPEP 2601

Query: 699  TQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVLQL 758
            TQVQCHDID+++SQLIA L  GLSS    +Q YS++LQR LPLNY+TT+ VHGWAQ LQL
Sbjct: 2602 TQVQCHDIDREISQLIAALSDGLSSAIATIQVYSVSLQRFLPLNYVTTSVVHGWAQALQL 2661

Query: 759  SANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAEL 818
            S NA S DI+SLARRQATEL+++++ DN+DS++ +HD++ ++V+KY  EI K+E+EC EL
Sbjct: 2662 SKNALSSDIISLARRQATELMMKVN-DNNDSVQVSHDNMCVQVDKYAKEIAKIEEECTEL 2720

Query: 819  VNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGK--- 875
            + SIG+ETE KAKDR L  F KYM SAGLV++E +  S Q G++ +DG+KD  ++ +   
Sbjct: 2721 LTSIGTETELKAKDRLLSTFTKYMTSAGLVKREAI-PSLQMGRVTHDGKKDINMQLELVA 2779

Query: 876  QDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCEFDEQVE 935
            + E KEKLLS +NVA+  LY E + ++LDI +D   G   N     DF  +F   +EQVE
Sbjct: 2780 EKEKKEKLLSSINVALDILYCEARGKILDILNDMNDGRLVNRTTSHDFNVVFSNLEEQVE 2839

Query: 936  KCILVAGFVNELWQSIGRDMYDNDADIECPNY-HFERNWASIFKTSLLACKTLVGQMTEV 994
            KC+L++ F +EL   I   +   +   +  +  H  RNW S F     + K L+G+MT+ 
Sbjct: 2840 KCMLLSEFHSELLDLIDVKVLSVENKYKSWHRNHSHRNWTSTFAVMFSSFKDLIGKMTDA 2899

Query: 995  VLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVGL 1054
            VLPD++RS IS NS                                         V  G 
Sbjct: 2900 VLPDIIRSAISVNS-----------------------------------------VSYGC 2918

Query: 1055 ITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQEA 1114
              EQQLALEEAAVKGRDHLSWEEAEELAS+EEAC+AEL++LHQTWNQRD+RSSSL K+EA
Sbjct: 2919 YLEQQLALEEAAVKGRDHLSWEEAEELASEEEACRAELHQLHQTWNQRDVRSSSLAKREA 2978

Query: 1115 DIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVGS 1174
            ++ +AL SSE  FQS+ISA    E    +   LLA LVKPF ELES+D+  +S   S  S
Sbjct: 2979 NLVHALASSECQFQSLISAA--VEETFTKGNTLLAKLVKPFSELESIDEIWSSSGVSFSS 3036

Query: 1175 IPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQN 1234
            I  G P L+D+++SG  ISE IW FG   + HSFFIWK+ ++DSFLDSC+H++A++VDQN
Sbjct: 3037 ISNGIPTLSDVVSSGYPISEYIWRFGGQLSSHSFFIWKICVVDSFLDSCIHEIASAVDQN 3096

Query: 1235 LGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTA--D 1292
             GFDQLFNV+KKKLE+QLQE++  YLKER  P  LA+LD+E EHLK L           D
Sbjct: 3097 FGFDQLFNVMKKKLELQLQEYIFRYLKERGVPAFLAWLDREREHLKPLEARKDNFHEHHD 3156

Query: 1293 DAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWM 1352
            +  KD   + R++ ML E+CN HETARAARS  SLM++QVNE +E L KTSLEI+QMEW+
Sbjct: 3157 EQIKDLEFIERIRYMLQEHCNVHETARAARSTVSLMRKQVNELKETLQKTSLEIIQMEWL 3216

Query: 1353 HDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACER 1412
            HD +LTPS  +R T QK+ S +D +YPIIL+LSR +LL +L+S+ ++IA+S+E L+ACER
Sbjct: 3217 HDNSLTPSQFNRATLQKFLSVEDRLYPIILDLSRSELLGSLRSATSRIAKSIEGLEACER 3276

Query: 1413 SSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKI 1472
             SLTAE QLERAMGWACGGPN+    N+S K SGIPP+FHDH++RRRQLLWE REK S I
Sbjct: 3277 GSLTAEAQLERAMGWACGGPNTGPVINTS-KASGIPPQFHDHILRRRQLLWETREKVSDI 3335

Query: 1473 VNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQE 1532
            + ICMS+L+FEASRDG+ + PG+ +      D+R+WQQ YLNA+T+L+V+YHSF+  EQE
Sbjct: 3336 IKICMSILEFEASRDGMLQFPGD-HAFSTDSDSRAWQQAYLNAITRLDVSYHSFSRTEQE 3394

Query: 1533 WKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAFGRV 1592
            WKLA+ SMEAASN LY+ATN L IA+LK KSASGDLQST+L+MRDCAYE+S AL+AFG V
Sbjct: 3395 WKLAERSMEAASNELYAATNNLRIANLKMKSASGDLQSTLLSMRDCAYESSVALSAFGSV 3454

Query: 1593 SRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLDSVL 1652
            SR HTALTSE GSMLEEVLAITEDLHDVH+LGKEAA I+  L+ED++KAN+VLLPL+++L
Sbjct: 3455 SRNHTALTSECGSMLEEVLAITEDLHDVHNLGKEAAVIHRQLIEDIAKANSVLLPLEAML 3514

Query: 1653 SKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVKGLYS 1712
            SKDVAAM DA+  ERE KME+SPIHGQAIYQSYCLR+R+A Q+ KPL+PSL  SVKGLYS
Sbjct: 3515 SKDVAAMIDAMAREREIKMEISPIHGQAIYQSYCLRIREAYQMFKPLVPSLTLSVKGLYS 3574

Query: 1713 MLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTA-ADSSQFDEKGR---EA 1768
            M T+LARTA LHAGNLHKALEGLGESQE+KS+G+ +++S   +  D+  F EK R     
Sbjct: 3575 MFTKLARTAGLHAGNLHKALEGLGESQEIKSEGIHITKSQFNSEVDAVDF-EKERESLSL 3633

Query: 1769 FSGSDSGSIKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVELT 1828
                 SG I D    ++ +SLQDK W+SPPDS  SSSSES  T+  +S PDSSN+  E  
Sbjct: 3634 SDSESSGDIPD----ITRLSLQDKEWLSPPDSFCSSSSESDFTT--SSFPDSSNDLTEDM 3687

Query: 1829 GQHPHGLNQDSGQSVSKRTEVNNTDSGSV-------------------KFTVDEPIEYFK 1869
            GQH +G +    + + K T  + TD G +                   K + +E     K
Sbjct: 3688 GQHYNGSSDREARVIPKITSFSQTDVGKMLRLEESETKSTDGSQTCFRKLSTNEFNGGIK 3747

Query: 1870 AQESPTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSRV 1929
               +P  E++ V   +S PL    E +   +  V+S +K  +E+EN E         SR 
Sbjct: 3748 IVATPPDESIEVPAIASHPLNETVE-RLEEESGVTSSDK-RLEDENQEAPPAQKAAWSRA 3805

Query: 1930 ARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
            +RG+NAYA SVLRRVEMKL+GRD V+NR LSIAEQVD+LLKQATSVDNLCNMYEGWTPWI
Sbjct: 3806 SRGRNAYATSVLRRVEMKLNGRDNVDNRELSIAEQVDYLLKQATSVDNLCNMYEGWTPWI 3865

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832098|ref|XP_002883931.1| hypothetical protein ARALYDRAFT_899833 [Arabidopsis lyrata subsp. lyrata] gi|297329771|gb|EFH60190.1| hypothetical protein ARALYDRAFT_899833 [Arabidopsis lyrata subsp. lyrata]

 Score = 2404 bits (6230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1251/2041 (61%), Positives = 1531/2041 (75%), Gaps = 81/2041 (3%)

Query: 1    MLAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVL 60
            MLAKL P  IVYPTLVDVNA +E+PSEEL H+  CL ELYPRLIQDV+LMINELGN+TVL
Sbjct: 1781 MLAKLCPSSIVYPTLVDVNACDEKPSEELLHVKACLTELYPRLIQDVQLMINELGNVTVL 1840

Query: 61   WEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVAL 120
            WEELWLSTLQDLH DV+RRIN+LKEEAAR++EN TLSQ+EK KINAAKYSAMMAPIVVAL
Sbjct: 1841 WEELWLSTLQDLHMDVIRRINLLKEEAARVSENVTLSQTEKNKINAAKYSAMMAPIVVAL 1900

Query: 121  ERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLAS 180
            ERRLASTSRKPETPHE+WF+EE+ E++KSAIL FKTPP   +ALG+VWRPFD+IAASLAS
Sbjct: 1901 ERRLASTSRKPETPHEVWFYEEYIERIKSAILTFKTPPL-PSALGEVWRPFDSIAASLAS 1959

Query: 181  HQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVS 240
            HQ+KSS+SL EVAP +S LSS ++PMPG EKQ   SESD      L GIVTI+S S+ V+
Sbjct: 1960 HQKKSSISLKEVAPSMSFLSSCNIPMPGLEKQSPLSESD----TPLHGIVTISSLSDHVT 2015

Query: 241  ILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLG 278
            IL TKT+PKKL++ G                        LLQA+NSF  SS AT   ++G
Sbjct: 2016 ILPTKTRPKKLIMFGSDGKKYIYLLKGREDLRLDARIMQLLQAINSFFCSSRATDDGTIG 2075

Query: 279  IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRP 338
            IRYYSVTPISGRAGLIQWVDNVISIYS+F+SWQ R +LAQ      G AKS   PPVPRP
Sbjct: 2076 IRYYSVTPISGRAGLIQWVDNVISIYSIFRSWQTRVKLAQMLPSVPGGAKSPDLPPVPRP 2135

Query: 339  SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKA 398
            SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLM EVP+QLLHQE+WCASEGFKA
Sbjct: 2136 SDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMSEVPKQLLHQELWCASEGFKA 2195

Query: 399  FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPE 458
            F+ K KRYS SVAAMS+VGH+LGLGDRHLDNIL+DF SGD+VHIDYNVCFDKGQRLKVPE
Sbjct: 2196 FTTKFKRYSGSVAAMSIVGHMLGLGDRHLDNILMDFCSGDVVHIDYNVCFDKGQRLKVPE 2255

Query: 459  IVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGD 518
            IVPFRLTQT+EAALGLTG+EGTFRANCEAV+ VLRKNKDILLML+EVFVWDPL+EWTRG+
Sbjct: 2256 IVPFRLTQTMEAALGLTGVEGTFRANCEAVLGVLRKNKDILLMLMEVFVWDPLVEWTRGN 2315

Query: 519  FHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALE------ 572
            FHDDAAIGGEERK ME+AVSLSLF+SRVQEIRV LQEHHDLLLATLPA EL+LE      
Sbjct: 2316 FHDDAAIGGEERKDMEVAVSLSLFSSRVQEIRVRLQEHHDLLLATLPAAELSLEFNDGEI 2375

Query: 573  ---RFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQARE 629
               RF++VL+QYE+AS++F +ADQER+ L+L E S K  VAEA CN+EKIRASFE+QA E
Sbjct: 2376 VFQRFSEVLNQYEIASSVFLQADQERAELILREASAKKTVAEAACNSEKIRASFEIQAHE 2435

Query: 630  FAQAKAVVTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAG 689
            F+QAKA+V+ KAQE   WMEQ GRIL ALR N+IPEI +   L+  + + SLTSAVLVAG
Sbjct: 2436 FSQAKALVSGKAQETAVWMEQRGRILGALRRNMIPEITAPTVLTDILASLSLTSAVLVAG 2495

Query: 690  VPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAV 749
            VP ++VPEPTQ QC+DID ++S L+  L  GLSS   ALQ YSLALQRILPLNY TT+ V
Sbjct: 2496 VPVTVVPEPTQAQCNDIDAEISLLVNNLSDGLSSALTALQTYSLALQRILPLNYHTTSRV 2555

Query: 750  HGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIE 809
            + WAQVLQL+A+A S DILSLA+RQA E   +I G + +S++  ++DL LKVEKY  +++
Sbjct: 2556 YDWAQVLQLAAHALSSDILSLAKRQAGEQFSKIQGGDFNSVRNCYNDLCLKVEKYADDVK 2615

Query: 810  KVEKECAELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKD 869
            K+E E AEL  SIG   ESKAKDR     + YM+S GLV   +   +     L++ G+K 
Sbjct: 2616 KMEVEYAELSASIGMGPESKAKDRLFYGLINYMQSPGLVENTNAGVN-----LQDSGKKT 2670

Query: 870  AGLRGKQDENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNRMQLDFGTLFCE 929
            +           K L+VL+ +++ LYD++K +V  I + S    + N  +     +L   
Sbjct: 2671 S-----------KALAVLHTSISSLYDQLKEKVHYILNASMERRERNESLVSKSRSLSSN 2719

Query: 930  FDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVG 989
             + QVE C+++  F+NE+   +G+++ + +  +       E NWA +F  +LL+ K LV 
Sbjct: 2720 LEAQVEMCMILVDFLNEVKYYVGQEIPNTEESLTGSARRVEENWALVFHRTLLSSKILVA 2779

Query: 990  QMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYF 1049
            QMTEVV+PDV+++ +  NS++MDAFGL+SQIRGSID   E L+E+++ER SLVELEQ+YF
Sbjct: 2780 QMTEVVVPDVLKTYLFCNSDLMDAFGLISQIRGSIDAAFEHLIEIKVERDSLVELEQNYF 2839

Query: 1050 VKVGLITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSL 1109
             KV  ITE QLALE+AA+K R+HLSWEEAEE A+QEEA + +L++LHQ+W QR+ R SSL
Sbjct: 2840 QKVSNITEGQLALEKAALKSREHLSWEEAEEFAAQEEAFRTQLDQLHQSWGQREFRISSL 2899

Query: 1110 MKQEADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFC 1169
            +K+EA ++NAL+ +E+ FQ + +A+E R+P+ LRS  ++  LVKPF ELE +DKTL+S  
Sbjct: 2900 IKKEAQVKNALILAEKQFQLLTNADECRKPNDLRSSRIMVELVKPFSELEQLDKTLSSLS 2959

Query: 1170 ESVGSIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAA 1229
             S  S+    P   D+++ G+S+SE IW F S+   HSFFIWK+GIIDSFLD C+HD + 
Sbjct: 2960 SSAVSMSDWIPAFGDILSCGQSLSENIWRFRSILKDHSFFIWKLGIIDSFLDLCIHDASP 3019

Query: 1230 SVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKEL 1289
            SVDQ LGF+QL   +KKK E QLQE V  YL   VAP  L+ LDKE E LK ++E     
Sbjct: 3020 SVDQTLGFEQLILFMKKKFEFQLQERVDCYLAGSVAPAFLSQLDKENERLKHISEENSA- 3078

Query: 1290 TADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQM 1349
              D  K D   +++V  ML EYCNAHETAR A+SAAS MK+QV E R+AL +TSL+IVQM
Sbjct: 3079 RRDQVKPDYSHLKQVHAMLEEYCNAHETAREAKSAASRMKKQVKEVRDALRRTSLDIVQM 3138

Query: 1350 EWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQA 1409
            EWM+DATLTPS   R   Q+ F+SDD+++PI L+L RPKLLET+ S++ +I+RS+E LQA
Sbjct: 3139 EWMNDATLTPSQTVRTALQQLFASDDNLHPIFLDLKRPKLLETIHSAIPQISRSIERLQA 3198

Query: 1410 CERSSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKA 1469
            CE++SL AEGQLERAMGWACGGP+S ++GNSS K SGIP EFHDHL+RR+QLLW+AREKA
Sbjct: 3199 CEQNSLAAEGQLERAMGWACGGPSSVSSGNSSAKMSGIPTEFHDHLLRRQQLLWDAREKA 3258

Query: 1470 SKIVNICMSVLDFEASRDGVFRTPGEVY--PARVGVDARSWQQVYLNAVTKLEVAYHSFT 1527
            S I  ICMS+L+FEASRDG+FR   E     AR   D+RSWQ+ YL+ V +LEV Y SFT
Sbjct: 3259 SNIAKICMSLLEFEASRDGIFRNAHEALDGDARFRGDSRSWQKAYLDLVARLEVTYQSFT 3318

Query: 1528 CAEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALT 1587
              EQEWKLAQSS+EAAS GLYSATNEL IAS+KAKSASGDLQST+L+MRDC YE SAAL+
Sbjct: 3319 HIEQEWKLAQSSLEAASTGLYSATNELSIASVKAKSASGDLQSTILSMRDCTYEVSAALS 3378

Query: 1588 AFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLP 1647
            +F RVSR HTALT+E+G+MLEEVLAITEDLHDVHSLGKEAA  + SLM+DL KANA+L P
Sbjct: 3379 SFSRVSRGHTALTTETGAMLEEVLAITEDLHDVHSLGKEAATFHRSLMDDLLKANAILTP 3438

Query: 1648 LDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYCLRVRDACQLLKPLLPSLMSSV 1707
            LDS LSKDVA +++A+T E ET +EVS +HGQAIYQSY  ++R++ Q L+PL+PS + SV
Sbjct: 3439 LDSALSKDVALIAEAMTRESETNIEVSSVHGQAIYQSYGAKIRESYQNLRPLVPSTVYSV 3498

Query: 1708 KGLYSMLTRLARTASLHAGNLHKALEGLGESQEVKSQGVSLSRSDLTAADSSQFDEKGRE 1767
            KGLYSMLTRLA+ AS+HA NL+KALE  GES+E KSQ  + S +DLT  D  + DE G E
Sbjct: 3499 KGLYSMLTRLAQIASVHARNLNKALEEPGESEEAKSQESAYSGADLTDND-FKLDELGEE 3557

Query: 1768 AFSGSDSGSIKDDFLGVSGISLQDKGWISPPDSIYSSSSESAITSGEASLPDSSNNPVEL 1827
                S S S     L +SG SL+DKGW+S PDS+YSS SES IT  EAS P S NN  E+
Sbjct: 3558 NHLESVSKS-SQALLSISGFSLEDKGWMSSPDSVYSSGSESNITLAEASSPASLNNSTEM 3616

Query: 1828 TGQHPHGLNQ-------------------DSGQSVSKRTEVNNTDSGSVKFTVDEPIEYF 1868
              Q      +                   DS Q VS    + + D    K +V+EP E  
Sbjct: 3617 LEQTQMNEEESNAFKSSTPSSQSNCDDISDSDQQVSAEALIESNDDCPRKASVEEPGENT 3676

Query: 1869 KAQESPTGEAVSVAVGSSQPLGNNSEVKFGVKDEVSSVNKVGIEEENNEDHVPNTHTVSR 1928
            + +   +  A+ V    SQPL  + E++ G K  +      G  E  +++  P T T +R
Sbjct: 3677 EFKLPASDVALKVTTDVSQPLVESPELESGRKKAMK-----GKFEVQSDEASPPTQTQTR 3731

Query: 1929 VARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPW 1988
            V RGKNAYA+SVL+ +EMK+DGR I +NR +SI EQVD+L+KQATSVDNLCNMYEGWTPW
Sbjct: 3732 VTRGKNAYALSVLKCMEMKIDGRGIADNREVSIPEQVDYLIKQATSVDNLCNMYEGWTPW 3791

Query: 1989 I 1989
            I
Sbjct: 3792 I 3792

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297601656|ref|NP_001051208.2| Os03g0738100 [Oryza sativa Japonica Group] gi|255674880|dbj|BAF13122.2| Os03g0738100 [Oryza sativa Japonica Group]

 Score = 1940 bits (5026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 974/1764 (55%), Positives = 1297/1764 (73%), Gaps = 49/1764 (2%)

Query: 2    LAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLW 61
            L  LSP  IVYPTLVD+NA E  PS+ELQ IL  L + YP+L++DV+L I ELG +TVLW
Sbjct: 1728 LGNLSPCSIVYPTLVDINACEGEPSDELQRILDFLVKQYPKLVKDVKLAIEELGMVTVLW 1787

Query: 62   EELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALE 121
            EE WLSTLQDLH+DV+RRIN+LKEEAAR+A N+TLS +EK KINAAKYSA+M PIVVALE
Sbjct: 1788 EEQWLSTLQDLHSDVLRRINILKEEAARVAANSTLSSAEKNKINAAKYSAIMTPIVVALE 1847

Query: 122  RRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASH 181
            RRLASTSR+P+T HE+WFH+E+  QLKSAI   KTPP S +ALG++WRPFD+IAASLA+H
Sbjct: 1848 RRLASTSREPKTSHEVWFHKEYNAQLKSAITALKTPPGSPSALGEIWRPFDSIAASLATH 1907

Query: 182  QRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSI 241
             RKS +SLSE+APQL+ LS+S++PMPGFEKQ+ +S       A   G +TI+SF +EV++
Sbjct: 1908 LRKSCISLSEIAPQLAALSTSNIPMPGFEKQIFSSSESS--FADSHGTITISSFCKEVTV 1965

Query: 242  LSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLGI 279
            LSTKT+PKKLV+ G                        LL+A+NSF  SS  TRS ++ I
Sbjct: 1966 LSTKTRPKKLVLQGSDGQKYTYLLKGREDLRLDSRIMQLLEAINSFFYSSSDTRSRNMAI 2025

Query: 280  RYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVP---PPVP 336
            R+YSVTPISGRAGLIQWV+NV SIY+V+K+WQ R+QLAQ          +S+    PPVP
Sbjct: 2026 RFYSVTPISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVNNSIHKSVPPVP 2085

Query: 337  RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGF 396
            RPSDMFYGKIIPALKEKGI+RVISRRDWP DVKRKVLL+LMKE P+Q+L QE+WCASEGF
Sbjct: 2086 RPSDMFYGKIIPALKEKGIKRVISRRDWPLDVKRKVLLELMKETPKQILWQEMWCASEGF 2145

Query: 397  KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKV 456
            + F+ K+KR+S SVAAMSM+GH+LGLGDRHLDNIL+DFSSGD+VHIDYN+CFDKG+RLK+
Sbjct: 2146 RNFNSKVKRFSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYNICFDKGKRLKI 2205

Query: 457  PEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR 516
            PEIVPFRLTQTIE+ALGLTG+EG FR  CE V++VL +NKDI+LMLLEVF+WDPL+EWTR
Sbjct: 2206 PEIVPFRLTQTIESALGLTGVEGVFRVTCEEVMAVLLRNKDIILMLLEVFLWDPLMEWTR 2265

Query: 517  GDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFAD 576
            G+  D+A I GEE+KGMELAVSLSLF+SR+QEIRVPLQEH DLL+  LPA   +L++F D
Sbjct: 2266 GNIQDEAGIAGEEKKGMELAVSLSLFSSRIQEIRVPLQEHQDLLVTNLPATLSSLKKFLD 2325

Query: 577  VLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAV 636
             L QYE+ SA+FY A++ERS+ +  ETS KSM+AEA+  AEK R SFE+ A E A+ KA 
Sbjct: 2326 TLEQYEVISAMFYHAEKERSSALQSETSAKSMLAEASSLAEKSRTSFELHAHELAETKAA 2385

Query: 637  VTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVP 696
              ++A +   W+E+HGRIL+A+R N I  + SC++L+   DA SL SAVL + VP ++VP
Sbjct: 2386 ANDEANKLAVWVEKHGRILEAIRDNSIAGVESCMQLNSKDDALSLISAVLESEVPLTVVP 2445

Query: 697  EPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVL 756
            EPT+ QC ++D++VSQLI EL  GLS+   +L  Y+L LQ++LP+NY+TT+ V GWAQ L
Sbjct: 2446 EPTRAQCSELDREVSQLILELQGGLSAALESLGEYALVLQQVLPVNYITTSPVTGWAQAL 2505

Query: 757  QLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECA 816
            QLS ++ S D+L LA+RQA E+I ++ G+  + ++Q + DL  ++E Y V IE++ +E +
Sbjct: 2506 QLSVSSGSEDLLPLAKRQAAEVIAKVQGEGINLVQQRYRDLLNQMESYVVCIERLARERS 2565

Query: 817  ELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQ 876
            EL+NSIG E E ++K+  L AFM  ++     R        QSG   N G K       Q
Sbjct: 2566 ELMNSIGFENEVRSKEWILSAFMNSIQLPSPKRDMGNIPFLQSG---NVGVKTPAHEDIQ 2622

Query: 877  DENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNR---MQLDFGTLFCEFDEQ 933
            DE    +LS+L +AV  LY +V+ +V ++ S   G  K       +Q D GT    FD+Q
Sbjct: 2623 DETG-IVLSILGIAVGQLYSDVRAKVSELSSKVTGIAKFRTDEAGLQADAGTSLQLFDQQ 2681

Query: 934  VEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTE 993
            VEKC L++GFV E+   +   + + +     P +     WAS F+  L +   ++ QMTE
Sbjct: 2682 VEKCALISGFVGEVHGVMEAKLVEMNTAYAKPQHG---QWASTFQRILCSSTNMIEQMTE 2738

Query: 994  VVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVG 1053
            V LP+++RS IS+NSEVM+AFG VSQIRGS+DT LE+LV +ELERAS+ E EQSYF+KVG
Sbjct: 2739 VFLPEIIRSFISYNSEVMEAFGSVSQIRGSVDTALEKLVRIELERASMTEFEQSYFMKVG 2798

Query: 1054 LITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQE 1113
             ITEQQ+ALEEAA+ GRDHLSWEEAEELASQEEAC+A+L +L +TW+Q+DM  SSLMK E
Sbjct: 2799 RITEQQIALEEAAMMGRDHLSWEEAEELASQEEACRAQLEQLQETWSQKDMTISSLMKVE 2858

Query: 1114 ADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVG 1173
            +   N+L+SS+++F S+++ ++  E H+ RSKALL++L KP  +LE++D  L+    + G
Sbjct: 2859 SSAMNSLLSSKQYFSSLVNVDQESEFHLRRSKALLSVLTKPLADLEALDHMLS----ACG 2914

Query: 1174 SIPYGT----PKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAA 1229
              PY        L D+++SG S+S+ +W F  L   H FF+WK+ ++DS LD C+H++++
Sbjct: 2915 LFPYHVDGPISNLTDVLSSGSSLSDVLWPFAGLLKDHCFFVWKLSLLDSILDLCMHEISS 2974

Query: 1230 SVDQNLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKEL 1289
            SV+ +   +QL+  +K KL   +++ V  Y+ ER+AP  +  LDKEI  L +L++  +E 
Sbjct: 2975 SVEHSFTTNQLYTALKTKLTNHVEKQVYRYIMERIAPAFILQLDKEISDLLQLSQGRRE- 3033

Query: 1290 TADDAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQM 1349
             +   K+D+ AV R+ +ML EYCNAHETARAAR+A SLM+RQ N+  EAL K  LEI+Q+
Sbjct: 3034 -SGQPKRDSAAVGRIAVMLEEYCNAHETARAARTAVSLMQRQSNDLTEALRKIVLEIIQV 3092

Query: 1350 EWMHDATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQA 1409
            EW+HD +   +  S++  Q    SDD    ++LN+SR  LL+ +QSSV+ + RS+E LQA
Sbjct: 3093 EWLHDLSSPHAQKSKVLSQNIL-SDDKFISVLLNISRGNLLDKIQSSVSLVTRSIECLQA 3151

Query: 1410 CERSSLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKA 1469
            CE +S++AEGQLERAMGWAC GPN+S AG+S+TK SGIP EFHDHL++RR+LLW  +E+A
Sbjct: 3152 CENTSVSAEGQLERAMGWACAGPNTSGAGSSTTKASGIPSEFHDHLLKRRKLLWVIQEQA 3211

Query: 1470 SKIVNICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCA 1529
            S + NIC SVL+FE SRDG++  P +    +     R+WQQ +LN +T+L+ AY SFTCA
Sbjct: 3212 SDLANICTSVLEFEGSRDGIYLIPEDKSSGQSTDRGRTWQQTFLNLLTRLDAAYRSFTCA 3271

Query: 1530 EQEWKLAQSSMEAASNGLYSATNELCIASLKAKSASGDLQSTVLTMRDCAYEASAALTAF 1589
            EQEWKL+Q +ME+A   LYS TN+L + S +AKSA  +LQ T+++M + A E +A+L+ F
Sbjct: 3272 EQEWKLSQFNMESAGKSLYSVTNQLSVVSSRAKSALVNLQDTLVSMYERASEVTASLSGF 3331

Query: 1590 GRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVLLPLD 1649
              VS+  TALTSE GS+LEEVLAI E LHDV+ +GKEAA +++S+M +LSKAN +LLPL+
Sbjct: 3332 KHVSQDRTALTSECGSLLEEVLAIAEGLHDVYIVGKEAAVMHNSIMSNLSKANTILLPLE 3391

Query: 1650 SVLSKDVAAMSDAITSERETKMEVSP-IHGQAIYQSYCLRVRDACQLLKPLLPSLMSSVK 1708
            + LS D+A MS+AI+ ERE      P IHG+A+YQSY +R+RDA + L+PL+P L    K
Sbjct: 3392 ASLSADLAVMSEAISKEREKNNTSMPLIHGKALYQSYIIRIRDAYKNLEPLVPPLADDAK 3451

Query: 1709 GLYSMLTRLARTASLHAGNLHKAL 1732
             L+S++T+L R +S+HAG+LHK L
Sbjct: 3452 ELHSLMTKLGRLSSIHAGSLHKVL 3475

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|31126780|gb|AAP44699.1| putative phosphatidylinositol 3-kinase-related protein kinase [Oryza sativa Japonica Group] gi|37999984|gb|AAR07071.1| putative phosphatidylinositol 3-kinase-related protein kinase [Oryza sativa Japonica Group]

 Score = 1905 bits (4936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 965/1768 (54%), Positives = 1283/1768 (72%), Gaps = 79/1768 (4%)

Query: 2    LAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLW 61
            L  LSP  IVYPTLVD+NA E  PS+ELQ IL  L + YP+L++DV+L I ELG +TVLW
Sbjct: 1728 LGNLSPCSIVYPTLVDINACEGEPSDELQRILDFLVKQYPKLVKDVKLAIEELGMVTVLW 1787

Query: 62   EELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALE 121
            EE WLSTLQDLH+DV+RRIN+LKEEAAR+A N+TLS +EK KINAAKYSA+M PIVVALE
Sbjct: 1788 EEQWLSTLQDLHSDVLRRINILKEEAARVAANSTLSSAEKNKINAAKYSAIMTPIVVALE 1847

Query: 122  RRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASH 181
            RRLASTSR+P+T HE+WFH+E+  QLKSAI   KTPP S +ALG++WRPFD+IAASLA+H
Sbjct: 1848 RRLASTSREPKTSHEVWFHKEYNAQLKSAITALKTPPGSPSALGEIWRPFDSIAASLATH 1907

Query: 182  QRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSI 241
             RKS +SLSE+APQL+ LS+S++PMPGFEKQ+ +S       A   G +TI+SF +EV++
Sbjct: 1908 LRKSCISLSEIAPQLAALSTSNIPMPGFEKQIFSSSESS--FADSHGTITISSFCKEVTV 1965

Query: 242  LSTKTKPKKLVILG----------------------QMLLQAVNSFLRSSPATRSHSLGI 279
            LSTKT+PKKLV+ G                        LL+A+NSF  SS  TRS ++ I
Sbjct: 1966 LSTKTRPKKLVLQGSDGQKYTYLLKGREDLRLDSRIMQLLEAINSFFYSSSDTRSRNMAI 2025

Query: 280  RYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVP---PPVP 336
            R+YSVTPISGRAGLIQWV+NV SIY+V+K+WQ R+QLAQ          +S+    PPVP
Sbjct: 2026 RFYSVTPISGRAGLIQWVENVSSIYNVYKTWQKRSQLAQAQLSSVNTVNNSIHKSVPPVP 2085

Query: 337  RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGF 396
            RPSDMFYGKIIPALKEKGI+RVISRRDWP DVKRKVLL+LMKE P+Q+L QE+WCASEGF
Sbjct: 2086 RPSDMFYGKIIPALKEKGIKRVISRRDWPLDVKRKVLLELMKETPKQILWQEMWCASEGF 2145

Query: 397  KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKV 456
            + F+ K+KR+S SVAAMSM+GH+LGLGDRHLDNIL+DFSSGD+VHIDYN+CFDKG+RLK+
Sbjct: 2146 RNFNSKVKRFSSSVAAMSMIGHVLGLGDRHLDNILMDFSSGDVVHIDYNICFDKGKRLKI 2205

Query: 457  PEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR 516
            PEIVPFRLTQTIE+ALGLTG+EG FR  CE V++VL +NKDI+LMLLEVF+WDPL+EWTR
Sbjct: 2206 PEIVPFRLTQTIESALGLTGVEGVFRVTCEEVMAVLLRNKDIILMLLEVFLWDPLMEWTR 2265

Query: 517  GDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFAD 576
            G+  D+A I GEE+KGMELAVSLSLF+SR+QEIRVPLQEH DLL+  LPA   +L++F D
Sbjct: 2266 GNIQDEAGIAGEEKKGMELAVSLSLFSSRIQEIRVPLQEHQDLLVTNLPATLSSLKKFLD 2325

Query: 577  VLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAV 636
             L QYE+ SA+FY A++ERS+ +  ETS KSM+AEA+  AEK R SFE+ A E A+ KA 
Sbjct: 2326 TLEQYEVISAMFYHAEKERSSALQSETSAKSMLAEASSLAEKSRTSFELHAHELAETKAA 2385

Query: 637  VTEKAQEATTWMEQHGRILDALRGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVP 696
              ++A +   W+E+HGRIL+A+R N I  + SC++L+   DA SL SAVL + VP ++VP
Sbjct: 2386 ANDEANKLAVWVEKHGRILEAIRDNSIAGVESCMQLNSKDDALSLISAVLESEVPLTVVP 2445

Query: 697  EPTQVQCHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQRILPLNYLTTTAVHGWAQVL 756
            EPT+ QC ++D++VSQLI EL  GLS+   +L  Y+L LQ++LP+NY+TT+ V GWAQ L
Sbjct: 2446 EPTRAQCSELDREVSQLILELQGGLSAALESLGEYALVLQQVLPVNYITTSPVTGWAQAL 2505

Query: 757  QLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECA 816
            QLS ++ S D+L LA+RQA E+I ++ G+  + ++Q + DL  ++E Y V IE++ +E +
Sbjct: 2506 QLSVSSGSEDLLPLAKRQAAEVIAKVQGEGINLVQQRYRDLLNQMESYVVCIERLARERS 2565

Query: 817  ELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDVSSSYQSGQLKNDGRKDAGLRGKQ 876
            EL+NSIG E E ++K+  L AFM  ++     R        QSG   N G K       Q
Sbjct: 2566 ELMNSIGFENEVRSKEWILSAFMNSIQLPSPKRDMGNIPFLQSG---NVGVKTPAHEDIQ 2622

Query: 877  DENKEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNR---MQLDFGTLFCEFDEQ 933
            DE    +LS+L +AV  LY +V+ +V ++ S   G  K       +Q D GT    FD+Q
Sbjct: 2623 DETG-IVLSILGIAVGQLYSDVRAKVSELSSKVTGIAKFRTDEAGLQADAGTSLQLFDQQ 2681

Query: 934  VEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSLLACKTLVGQMTE 993
            VEKC L++GFV E+   +   + + +     P +     WAS F+  L +   ++ QMTE
Sbjct: 2682 VEKCALISGFVGEVHGVMEAKLVEMNTAYAKPQHG---QWASTFQRILCSSTNMIEQMTE 2738

Query: 994  VVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASLVELEQSYFVKVG 1053
            V LP+++RS IS+NSEVM+AFG VSQIRGS+DT LE+LV +ELERAS+ E EQSYF+KVG
Sbjct: 2739 VFLPEIIRSFISYNSEVMEAFGSVSQIRGSVDTALEKLVRIELERASMTEFEQSYFMKVG 2798

Query: 1054 LITEQQLALEEAAVKGRDHLSWEEAEELASQEEACKAELNELHQTWNQRDMRSSSLMKQE 1113
             ITEQQ+ALEEAA+ GRDHLSWEEAEELASQEEAC+A+L +L +TW+Q+DM  SSLMK E
Sbjct: 2799 RITEQQIALEEAAMMGRDHLSWEEAEELASQEEACRAQLEQLQETWSQKDMTISSLMKVE 2858

Query: 1114 ADIRNALVSSERHFQSVISAEEFREPHILRSKALLAILVKPFMELESVDKTLASFCESVG 1173
            +   N+L+SS+++F S+++ ++  E H+ RSKALL++L KP  +LE++D  L+    + G
Sbjct: 2859 SSAMNSLLSSKQYFSSLVNVDQESEFHLRRSKALLSVLTKPLADLEALDHMLS----ACG 2914

Query: 1174 SIPYGTPKLADLINSGRSISECIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQ 1233
              PY                          + H FF+WK+ ++DS LD C+H++++SV+ 
Sbjct: 2915 LFPY--------------------------HDHCFFVWKLSLLDSILDLCMHEISSSVEH 2948

Query: 1234 NLGFDQLFNVVKKKLEVQLQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTADD 1293
            +   +QL+  +K KL   +++ V  Y+ ER+AP  +  LDKEI  L +L++  +E  +  
Sbjct: 2949 SFTTNQLYTALKTKLTNHVEKQVYRYIMERIAPAFILQLDKEISDLLQLSQGRRE--SGQ 3006

Query: 1294 AKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALHKTSLEIVQMEWMH 1353
             K+D+ AV R+ +ML EYCNAHETARAAR+A SLM+RQ N+  EAL K  LEI+Q+EW+H
Sbjct: 3007 PKRDSAAVGRIAVMLEEYCNAHETARAARTAVSLMQRQSNDLTEALRKIVLEIIQVEWLH 3066

Query: 1354 DATLTPSYNSRITFQKYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESLQACERS 1413
            D +   +  S++  Q    SDD    ++LN+SR  LL+ +QSSV+ + RS+E LQACE +
Sbjct: 3067 DLSSPHAQKSKVLSQNIL-SDDKFISVLLNISRGNLLDKIQSSVSLVTRSIECLQACENT 3125

Query: 1414 SLTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIV 1473
            S++AEGQLERAMGWAC GPN+S AG+S+TK SGIP EFHDHL++RR+LLW  +E+AS + 
Sbjct: 3126 SVSAEGQLERAMGWACAGPNTSGAGSSTTKASGIPSEFHDHLLKRRKLLWVIQEQASDLA 3185

Query: 1474 NICMSVLDFEASRDGVFRTPGEVYPARVGVDARSWQQVYLNAVTKLEVAYHSFTCAEQEW 1533
            NIC SVL+FE SRDG++  P +    +     R+WQQ +LN +T+L+ AY SFTCAEQEW
Sbjct: 3186 NICTSVLEFEGSRDGIYLIPEDKSSGQSTDRGRTWQQTFLNLLTRLDAAYRSFTCAEQEW 3245

Query: 1534 KLAQSSMEAASNGLYSATNELCIASLKAKSA--------SGDLQSTVLTMRDCAYEASAA 1585
            KL+Q +ME+A   LYS TN+L + S +AKSA          +LQ T+++M + A E +A+
Sbjct: 3246 KLSQFNMESAGKSLYSVTNQLSVVSSRAKSALECSVYIFPVNLQDTLVSMYERASEVTAS 3305

Query: 1586 LTAFGRVSRVHTALTSESGSMLEEVLAITEDLHDVHSLGKEAAAINHSLMEDLSKANAVL 1645
            L+ F  VS+  TALTSE GS+LEEVLAI E LHDV+ +GKEAA +++S+M +LSKAN +L
Sbjct: 3306 LSGFKHVSQDRTALTSECGSLLEEVLAIAEGLHDVYIVGKEAAVMHNSIMSNLSKANTIL 3365

Query: 1646 LPLDSVLSKDVAAMSDAITSERETKMEVSP-IHGQAIYQSYCLRVRDACQLLKPLLPSLM 1704
            LPL++ LS D+A MS+AI+ ERE      P IHG+A+YQSY +R+RDA + L+PL+P L 
Sbjct: 3366 LPLEASLSADLAVMSEAISKEREKNNTSMPLIHGKALYQSYIIRIRDAYKNLEPLVPPLA 3425

Query: 1705 SSVKGLYSMLTRLARTASLHAGNLHKAL 1732
               K L+S++T+L R +S+HAG+LHK L
Sbjct: 3426 DDAKELHSLMTKLGRLSSIHAGSLHKVL 3453

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1989
ZFIN|ZDB-GENE-061013-767	3640	smg1 "PI-3-kinase-related kina	0.357	0.195	0.328	2.9e-112
UNIPROTKB|F1PBU5	3632	SMG1 "Uncharacterized protein"	0.348	0.191	0.326	1.1e-108
UNIPROTKB|J9NTC0	3634	SMG1 "Uncharacterized protein"	0.347	0.190	0.331	2.4e-108
UNIPROTKB|F1MBL6	3637	SMG1 "Uncharacterized protein"	0.348	0.190	0.325	2.5e-108
UNIPROTKB|J3KRA9	3551	SMG1 "Serine/threonine-protein	0.347	0.194	0.329	2e-107
UNIPROTKB|Q96Q15	3661	SMG1 "Serine/threonine-protein	0.347	0.189	0.329	2.4e-107
UNIPROTKB|I3L0C1	3662	SMG1 "Serine/threonine-protein	0.347	0.188	0.329	2.4e-107
MGI|MGI:1919742	3658	Smg1 "SMG1 homolog, phosphatid	0.347	0.189	0.329	3.9e-106
UNIPROTKB|E1BW33	3665	SMG1 "Uncharacterized protein"	0.356	0.193	0.325	1e-104
FB|FBgn0263968	3218	nonC "no-on-and-no-off transie	0.249	0.154	0.319	2.1e-72

ZFIN|ZDB-GENE-061013-767 smg1 "PI-3-kinase-related kinase SMG-1" [Danio rerio (taxid:7955)]

 Score = 1003 (358.1 bits), Expect = 2.9e-112, Sum P(4) = 2.9e-112
 Identities = 247/753 (32%), Positives = 392/753 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +T+LW+ELWL  LQ  H  V+RRI  L++E  R+ 
Sbjct:  1911 IVDKLSSANPTMVLQVQMLVGELRRVTLLWDELWLGVLQQQHMHVLRRIQQLEDEVKRVQ 1970

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K+SA+M P+V AL+   + T+   ETPHE WF E +G+ + +A+
Sbjct:  1971 NNNTLRKDEKVAIMREKHSALMKPVVFALDHVRSITAAPAETPHEEWFQETYGDAIHNAL 2030

Query:   152 LNFKTP--PASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPM 206
                ++P  PA+ A+    W PF  I  SL    Q+++S  + L E++P+L+ ++++++ +
Sbjct:  2031 ERLRSPLNPANPASS---WVPFKQIMLSLQQRAQKRASYLLRLDEISPRLTAMANTEMAL 2087

Query:   207 PG--FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQML 258
             PG        T +S G     L      + +  + S       L    +   L       
Sbjct:  2088 PGEVSATDAVTIQSVGNTITILPTKTKPKKLYFLGSDGRNYPYLFKGLEDLHLDERIMQF 2147

Query:   259 LQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQ 318
             L  VN+         S     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R  + Q
Sbjct:  2148 LSIVNTMFTKVNQQESPRFQARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAVVQ 2207

Query:   319 FSAIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMK 378
                      +           +++Y KI PALK  G+   +SRRDWP  V R VL +LM+
Sbjct:  2208 AQKAQDSFQQPQNLPMVPRPSELYYSKISPALKAVGLSLDVSRRDWPLSVMRDVLRELME 2267

Query:   379 EVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGD 438
               P  LL +E+WC+      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G+
Sbjct:  2268 ATPPNLLAKELWCSCTTPSEWWSVTQTYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGE 2327

Query:   439 IVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDI 498
             +VHIDYNVCF+KG+ L+VPE VPFR+T  IE ALG+TG+EG FR +CE VV ++R+ ++ 
Sbjct:  2328 VVHIDYNVCFEKGKSLRVPEKVPFRMTHNIETALGVTGVEGIFRLSCEQVVQIMRRGRET 2387

Query:   499 LLMLLEVFVWDPLIEWTRG-DFHDDAAI---GGEE------RKGMELAVSLSLFASRVQE 548
             LL LLE FV+DPL++WT G +     A+   GG++      ++ ME  ++ SLF+SRV E
Sbjct:  2388 LLTLLEAFVYDPLVDWTAGGEVGFAGAVYGGGGQQAENKQSKREMERDITRSLFSSRVAE 2447

Query:   549 IRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSM 608
             I+V   ++ D +   LP +E A++ + ++  Q      +  +  +E   L   +T     
Sbjct:  2448 IKVNWFKNRDEMTGVLPQLEEAVDEYLNLQEQLTQVEKVQGKLLEELEFLEGADTRADHP 2507

Query:   609 VAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIP 664
             +        +     ++Q+R+     A+   K  +   W+ Q+     +L      +L+ 
Sbjct:  2508 IHSLE---HRYSEHTQLQSRQRTVQDAI-QGKLSDLDQWISQYQAAFASLEATQLASLLQ 2563

Query:   665 EINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSV 724
             EI+S I L G       TS +  AG    I       QC  ++ +VS L+ +    L   
Sbjct:  2564 EISSPIDL-GPPSYVPATSFLQNAGQAHLIS------QCEALEAEVSALLQQRRSQLRGC 2616

Query:   725 FIALQAYSLALQRILPLNYLTTTAVHGWAQVLQ 757
                L +Y+  +  + P   L     H W Q ++
Sbjct:  2617 LEHLHSYA-TVALLYPRAVLHRHRAHTWKQWME 2648

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1PBU5 SMG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 976 (348.6 bits), Expect = 1.1e-108, Sum P(4) = 1.1e-108
 Identities = 239/731 (32%), Positives = 387/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1902 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1961

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+
Sbjct:  1962 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENAL 2021

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP ++ A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  2022 EKLKTP-SNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG 2080

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2081 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2140

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2141 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2200

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2201 KAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRRDWPLHVMKAVLEELMEAT 2260

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2261 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2320

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2321 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2380

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2381 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2440

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2441 VNWFKNRDEMLVVLPKLDSSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2496

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2497 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2555

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             +S + L+    ++   +A L       ++      QC  ++ +V  L+ +    L     
Sbjct:  2556 SSQMDLAKGPPSYVPATAFLQNAGQAHLIS-----QCEQLEGEVGALLQQRRSVLRGCLE 2610

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2611 QLHHYATVALQ 2621

GO:0016301 "kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

UNIPROTKB|J9NTC0 SMG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 973 (347.6 bits), Expect = 2.4e-108, Sum P(4) = 2.4e-108
 Identities = 242/731 (33%), Positives = 386/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1906 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1965

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+
Sbjct:  1966 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENAL 2025

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP ++ A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  2026 EKLKTP-SNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG 2084

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2085 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2144

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2145 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2204

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2205 KAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRRDWPLHVMKAVLEELMEAT 2264

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2265 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2324

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2325 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2384

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2385 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2444

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2445 VNWFKNRDEMLVVLPKLDSSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2500

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2501 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2559

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             +S + L G       T+ +  AG    I       QC  ++ +V  L+ +    L     
Sbjct:  2560 SSQMDL-GPPSYVPATAFLQNAGQAHLIS------QCEQLEGEVGALLQQRRSVLRGCLE 2612

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2613 QLHHYATVALQ 2623

GO:0016301 "kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

UNIPROTKB|F1MBL6 SMG1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 973 (347.6 bits), Expect = 2.5e-108, Sum P(4) = 2.5e-108
 Identities = 238/731 (32%), Positives = 387/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1907 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1966

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+
Sbjct:  1967 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENAL 2026

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP ++ A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  2027 EKLKTP-SNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG 2085

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2086 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2145

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2146 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2205

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2206 KAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRRDWPLHVMKAVLEELMEAT 2265

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2266 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2325

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2326 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2385

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2386 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2445

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2446 VNWFKNRDEMLVVLPKLDSSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2501

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2502 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2560

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             ++ + L+    ++   +A L       ++      QC  ++ +V  L+ +    L     
Sbjct:  2561 STQMDLAKGPPSYVPATAFLQNAGQAHLIS-----QCEQLEGEVGALLQQRRSVLRGCLE 2615

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2616 QLHHYATVALQ 2626

GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

UNIPROTKB|J3KRA9 SMG1 "Serine/threonine-protein kinase SMG1" [Homo sapiens (taxid:9606)]

 Score = 966 (345.1 bits), Expect = 2.0e-107, Sum P(4) = 2.0e-107
 Identities = 241/731 (32%), Positives = 385/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1823 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1882

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+
Sbjct:  1883 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENAL 1942

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP  + A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  1943 EKLKTP-LNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG 2001

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2002 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2061

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2062 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2121

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2122 KAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEAT 2181

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2182 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2241

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2242 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2301

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2302 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2361

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2362 VNWFKNRDEMLVVLPKLDGSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2417

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2418 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2476

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             ++ + L G       T+ +  AG    I       QC  ++ +V  L+ +    L     
Sbjct:  2477 STQMDL-GPPSYVPATAFLQNAGQAHLIS------QCEQLEGEVGALLQQRRSVLRGCLE 2529

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2530 QLHHYATVALQ 2540

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|Q96Q15 SMG1 "Serine/threonine-protein kinase SMG1" [Homo sapiens (taxid:9606)]

 Score = 966 (345.1 bits), Expect = 2.4e-107, Sum P(4) = 2.4e-107
 Identities = 241/731 (32%), Positives = 385/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1933 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1992

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+
Sbjct:  1993 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENAL 2052

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP  + A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  2053 EKLKTP-LNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG 2111

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2112 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2171

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2172 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2231

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2232 KAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEAT 2291

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2292 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2351

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2352 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2411

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2412 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2471

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2472 VNWFKNRDEMLVVLPKLDGSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2527

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2528 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2586

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             ++ + L G       T+ +  AG    I       QC  ++ +V  L+ +    L     
Sbjct:  2587 STQMDL-GPPSYVPATAFLQNAGQAHLIS------QCEQLEGEVGALLQQRRSVLRGCLE 2639

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2640 QLHHYATVALQ 2650

GO:0005524 "ATP binding" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=IDA;NAS;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=EXP;IDA;NAS

GO:0046854 "phosphatidylinositol phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006406 "mRNA export from nucleus" evidence=TAS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA;TAS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006950 "response to stress" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

UNIPROTKB|I3L0C1 SMG1 "Serine/threonine-protein kinase SMG1" [Homo sapiens (taxid:9606)]

 Score = 966 (345.1 bits), Expect = 2.4e-107, Sum P(4) = 2.4e-107
 Identities = 241/731 (32%), Positives = 385/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1933 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1992

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ +++A+
Sbjct:  1993 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENAL 2052

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP  + A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  2053 EKLKTP-LNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPG 2111

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2112 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2171

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2172 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2231

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2232 KAQDSYQTPQNPGIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEAT 2291

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2292 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2351

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2352 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2411

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2412 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2471

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2472 VNWFKNRDEMLVVLPKLDGSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2527

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2528 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2586

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             ++ + L G       T+ +  AG    I       QC  ++ +V  L+ +    L     
Sbjct:  2587 STQMDL-GPPSYVPATAFLQNAGQAHLIS------QCEQLEGEVGALLQQRRSVLRGCLE 2639

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2640 QLHHYATVALQ 2650

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

MGI|MGI:1919742 Smg1 "SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)" [Mus musculus (taxid:10090)]

 Score = 969 (346.2 bits), Expect = 3.9e-106, Sum P(5) = 3.9e-106
 Identities = 241/731 (32%), Positives = 385/731 (52%)

Query:    32 ILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIA 91
             I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H  V+RRI  L++E  R+ 
Sbjct:  1931 IVDKLSSANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQ 1990

Query:    92 ENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI 151
              N TL + EK  I   K++A+M PIV ALE   + T+   ETPHE WF + +G+ + +A+
Sbjct:  1991 NNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIDNAL 2050

Query:   152 LNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLSEVAPQLSLLSSSDVPMPG 208
                KTP ++ A  G  W PF  I  SL    Q+++S  + L E++P L+ ++++++ +PG
Sbjct:  2051 EKLKTP-SNPAKPGSSWIPFKEIMLSLQQRAQKRASYILRLDEISPWLAAMTNTEIALPG 2109

Query:   209 --FEKQVATSESDGGLTATL------RGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQ 260
                 +   T  S GG    L      + ++ + S  +    L    +   L       L 
Sbjct:  2110 EVSARDTVTIHSVGGTITILPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLS 2169

Query:   261 AVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFS 320
              VN+   +     +     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R    Q  
Sbjct:  2170 IVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQ 2229

Query:   321 AIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEV 380
                                +++Y KI PALK  G+   +SRRDWP  V + VL +LM+  
Sbjct:  2230 KAQDSYQTPQNPSIVPRPSELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEAT 2289

Query:   381 PRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
             P  LL +E+W +      +    + Y+ S A MSMVG+I+GLGDRHLDN+L+D ++G++V
Sbjct:  2290 PPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVV 2349

Query:   441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
             HIDYNVCF+KG+ L+VPE VPFR+TQ IE ALG+TG+EG FR +CE V+ ++R+ ++ LL
Sbjct:  2350 HIDYNVCFEKGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHIMRRGRETLL 2409

Query:   501 MLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKGMELAVSLSLFASRVQEIR 550
              LLE FV+DPL++WT G     A A+   GG++      ++ ME  ++ SLF+SRV EI+
Sbjct:  2410 TLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSLFSSRVAEIK 2469

Query:   551 VPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVA 610
             V   ++ D +L  LP ++ +L+ +  +  Q      L  +  +E   L       + +  
Sbjct:  2470 VNWFKNRDEMLVVLPKLDSSLDEYLSLQEQLTDVEKLQGKLLEEIEFL----EGAEGVDH 2525

Query:   611 EANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRG----NLIPEI 666
              ++    +     ++Q ++ A  +A+   K  E   W+  +    + L      +L+ EI
Sbjct:  2526 PSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQAAFNNLEATQLASLLQEI 2584

Query:   667 NSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELDHGLSSVFI 726
             ++ + L G       T+ +  AG    I       QC  ++ +V  L+ +    L     
Sbjct:  2585 STQMDL-GPPSYVPATAFLQNAGQAHLIS------QCEQLEGEVGALLQQRRSVLRGCLE 2637

Query:   727 ALQAYS-LALQ 736
              L  Y+ +ALQ
Sbjct:  2638 QLHHYATVALQ 2648

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006281 "DNA repair" evidence=IEA

GO:0006950 "response to stress" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0046854 "phosphatidylinositol phosphorylation" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E1BW33 SMG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 959 (342.6 bits), Expect = 1.0e-104, Sum P(5) = 1.0e-104
 Identities = 244/749 (32%), Positives = 391/749 (52%)

Query:    14 TLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLH 73
             T V +N  +    +    I+  L    P ++  V++++ EL  +TVLW+ELWL  L   H
Sbjct:  1918 TKVGLNEDQAMMQDCYSKIVEKLSTANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQH 1977

Query:    74 ADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPET 133
               V+RRI  L++E  R+  N TL + EK  I   K++A+M PIV ALE   + T+   ET
Sbjct:  1978 MYVLRRIQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPIVFALEHVRSITAAPTET 2037

Query:   134 PHEIWFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASH-QRKSS--VSLS 190
             PHE WF + +G  +++A+   K P  + A  G  W PF  +  SL    Q+++S  + L 
Sbjct:  2038 PHEKWFQDNYGGAIENALEKLKNP-LNPAKPGSSWLPFKEVMLSLQQRAQKRASYLLRLE 2096

Query:   191 EVAPQLSLLSSSDVPMPG--FEKQVATSESDGGLTATL------RGIVTIASFSEEVSIL 242
             E++P L+ + ++++ +PG    +   T  S G     L      + ++ + S  +    L
Sbjct:  2097 EISPWLAAMMNTEIALPGEVSTRDTVTIHSVGSTITILPTKTKPKKLLFLGSDGKNYPYL 2156

Query:   243 STKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVIS 302
                 +   L       L  VN+   +     +     R+YSVTP+  R+GLIQWVD    
Sbjct:  2157 FKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTPLGTRSGLIQWVDGATP 2216

Query:   303 IYSVFKSWQHRAQLAQFSAIGAGNAKXXXXXXXXXXXDMFYGKIIPALKEKGIRRVISRR 362
             ++ ++K WQ R    Q                     +++Y KI PALK  G+   +SRR
Sbjct:  2217 LFGLYKRWQQREAALQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRR 2276

Query:   363 DWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGL 422
             DWP +V R VL +LM+  P  LL +E+W +      +    + Y+ S A MSMVG+I+GL
Sbjct:  2277 DWPLNVMRAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGL 2336

Query:   423 GDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFR 482
             GDRHLDN+L+D ++G++VHIDYNVCF+KG+ L+VPE VPFR+T  IE ALG+TG+EG FR
Sbjct:  2337 GDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTHNIETALGVTGVEGVFR 2396

Query:   483 ANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDA-AI---GGEE------RKG 532
              +CE V+ ++R+ ++ LL LLE FV+DPL++WT G     A A+   GG++      ++ 
Sbjct:  2397 LSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAENKQSKRE 2456

Query:   533 MELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRAD 592
             ME  ++ SLF+SRV EI+V   ++ D +LA LP ++ +LE + ++  Q      L  +  
Sbjct:  2457 MERDITRSLFSSRVAEIKVNWFKNRDEMLAVLPKLDSSLEEYLNLQEQLTDVEKLQGKLL 2516

Query:   593 QERSNLVLHETSTKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHG 652
             +E   L       + +   ++    +     ++Q ++ A  +A+   K  E   W+  + 
Sbjct:  2517 EEIEFL----EGAEGVDHPSHTLQHRYSEHTQLQTQQRAVQEAIQV-KLNEFEQWITHYQ 2571

Query:   653 RI---LDALR-GNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDK 708
                  L+A +  +L+ EI++ + L G       T+ +  AG    I       QC  ++ 
Sbjct:  2572 AAFSNLEATQLASLLQEISTQMDL-GPPSYVPATAFLQNAGQAHLIS------QCEQLEG 2624

Query:   709 DVSQLIAELDHGLSSVFIALQAYS-LALQ 736
             +V  L+ +    L      L  Y+ +ALQ
Sbjct:  2625 EVGALLQQRRSVLRGCLEQLHNYATVALQ 2653

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

FB|FBgn0263968 nonC "no-on-and-no-off transient C" [Drosophila melanogaster (taxid:7227)]

 Score = 701 (251.8 bits), Expect = 2.1e-72, Sum P(5) = 2.1e-72
 Identities = 174/545 (31%), Positives = 284/545 (52%)

Query:     2 LAKLSPWCIVYPTLVDVNAYEE---------RPSEE----LQHILGCLRELYPRLIQDVE 48
             LAK  P  +++P +V  N  ++         RP+ E      ++LG L +  P  +Q V+
Sbjct:  1674 LAKSRPQLVIFPAVVGANREQQDATAPPATARPTTEDACCYGYLLGELSKQAPEAVQHVK 1733

Query:    49 LMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAK 108
             LM+ EL  + +LW+E W+ +L  ++   + R++ L       A +      E K  N  +
Sbjct:  1734 LMVKELRRVCLLWDEYWIHSLAHIYNTYVSRVSAL-------ATDFRPDDHEGKN-N--R 1783

Query:   109 YSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAI--LNFKTPPASAAALGD 166
             ++     ++  LE  +A TSR PET +E  F + F   ++  +  L  +  P +   L  
Sbjct:  1784 FNVWRPQLLADLEALVAVTSRPPETTYERSFRKRFDAPIRLTVDALRHRRYPEAWDKLKQ 1843

Query:   167 VWRPFDNIAASLASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEKQ--------VATSES 218
             ++    +I  S       S++ +  ++P L  +    + MPG +          + + ES
Sbjct:  1844 LY----HILQSNMIRGSGSTLKMQSISPVLCGIGRMRISMPGLDAHGPDGDQVYIESVES 1899

Query:   219 DGGLTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQMLLQAVNSFLRSSPATRSHSLG 278
                +  T      +A +       +   K  + + L + ++Q + S   +  A RS + G
Sbjct:  1900 SVCVLPTKTKPKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFL-SISNAIMACRSDAPG 1958

Query:   279 -----IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKXXXXX 333
                    +YSV P+  ++GLI WVD V  +++++K WQ R      +A GAG        
Sbjct:  1959 NGCYRAHHYSVIPLGPQSGLISWVDGVTPVFALYKKWQQRRSQVAGNA-GAG----AVAN 2013

Query:   334 XXXXXXDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCAS 393
                   D+FY K+ P L +  ++    RR WP  V  +VL +L +E P  LL +E+WC +
Sbjct:  2014 VPRRFTDLFYNKLSPLLAKHNMQVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQA 2073

Query:   394 EGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQR 453
                  +   ++R+   ++ MSM+G+++GLGDRHLDN+L++  SGDIVHIDYNVCF+KG+ 
Sbjct:  2074 GNAAEWRQSVRRFVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRT 2133

Query:   454 LKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE 513
             L++PE VPFRLTQ +  A+G+TGIEG FR  CE V+ V+RK ++ LL LLE FV+DPL++
Sbjct:  2134 LRIPEKVPFRLTQNLVQAMGITGIEGPFRLGCEYVLKVMRKERETLLTLLEAFVYDPLVD 2193

Query:   514 WTRGD 518
             WT  D
Sbjct:  2194 WTTND 2198

GO:0004672 "protein kinase activity" evidence=NAS

GO:0016310 "phosphorylation" evidence=NAS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=IDA;IMP;NAS

GO:0035195 "gene silencing by miRNA" evidence=IMP

GO:0016246 "RNA interference" evidence=IMP

GO:0050808 "synapse organization" evidence=IDA

GO:0007274 "neuromuscular synaptic transmission" evidence=IDA

GO:0048489 "synaptic vesicle transport" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	1989
cd05170	307	cd05170, PIKKc_SMG1, Suppressor of morphogenetic e	1e-137
cd05169	280	cd05169, PIKKc_TOR, TOR (Target of rapamycin), cat	5e-66
cd05171	279	cd05171, PIKKc_ATM, Ataxia telangiectasia mutated	2e-62
cd00892	237	cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and	5e-52
COG5032	2105	COG5032, TEL1, Phosphatidylinositol kinase and pro	8e-44
cd05164	222	cd05164, PIKKc, Phosphoinositide 3-kinase-related	2e-42
smart00146	240	smart00146, PI3Kc, Phosphoinositide 3-kinase, cata	3e-42
pfam00454	233	pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3-	2e-40
cd00142	219	cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI	9e-34
cd05172	235	cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas	4e-27
cd05164	222	cd05164, PIKKc, Phosphoinositide 3-kinase-related	1e-14
cd00892	237	cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and	5e-12
cd05172	235	cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas	1e-11
pfam02260	33	pfam02260, FATC, FATC domain	6e-11
cd05163	253	cd05163, TRRAP, TRansformation/tRanscription domai	4e-09
cd05168	293	cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase	7e-09
cd05167	311	cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinas	5e-07
cd00896	350	cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3	9e-07
cd05173	362	cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase	3e-06
COG5032	2105	COG5032, TEL1, Phosphatidylinositol kinase and pro	1e-05
cd00893	289	cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4	6e-05
cd00891	352	cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K),	7e-05
cd05166	353	cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K	7e-05
cd05165	366	cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K)	1e-04
cd00142	219	cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI	2e-04
cd05174	361	cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase	6e-04
cd00894	365	cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase	0.003

>gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  428 bits (1102), Expect = e-137
 Identities = 144/307 (46%), Positives = 193/307 (62%), Gaps = 22/307 (7%)

Query: 232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSS 269
           I S    V+IL TKTKPKKL  LG                         L  VN+   S 
Sbjct: 1   IESVGSTVTILPTKTKPKKLAFLGSDGKKYTYLFKGREDLHLDERIMQFLSIVNTMFASI 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKS 329
               S     R+YSVTP+  R+GLIQWVD    ++ ++K WQ R  + Q      G    
Sbjct: 61  KDQESPRFRARHYSVTPLGPRSGLIQWVDGATPLFGLYKRWQQREAVLQAQKSQVGYQNP 120

Query: 330 SVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEI 389
            +P  VPRPSD+FY KI PALK  G+   +SRRDWP  V R+VL +LM+E P+ LL +E+
Sbjct: 121 QIPGIVPRPSDLFYNKITPALKAHGLSLDVSRRDWPLSVLRQVLDELMQETPKDLLAREL 180

Query: 390 WCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD 449
           WC+S     +    +RY+ S A MSM+G+++GLGDRHLDN+L+D  +G++VHIDYNVCF+
Sbjct: 181 WCSSTTSSEWWSVTQRYARSTAVMSMIGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFE 240

Query: 450 KGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWD 509
           KG+ L++PE VPFR+TQ IE ALGLTG+EG FR +CE V+ ++R+ ++ LL LLE FV+D
Sbjct: 241 KGKSLRIPEKVPFRMTQNIETALGLTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYD 300

Query: 510 PLIEWTR 516
           PL++WT 
Sbjct: 301 PLVDWTA 307

SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by genome mutations and by errors during transcription and splicing. SMG-1 phosphorylates Upf1, another central component of NMD, at the C-terminus upon recognition of PTCs. The phosphorylation/dephosphorylation cycle of Upf1 is essential for promoting NMD. Length = 307

>gnl|CDD|119429 cd05169, PIKKc_TOR, TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  225 bits (575), Expect = 5e-66
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 57/310 (18%)

Query: 232 IASFSEEVSILSTKTKPKKLVILG------QMLLQA----------------VNSFLRSS 269
           I+SF   + ++ +K +P++L I+G      + LL+                 +N+ L++ 
Sbjct: 1   ISSFDPVLKVIPSKQRPRRLTIVGSDGKEYKFLLKGHEDLRLDERVMQLFGLINTLLKND 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKS 329
             T   +L I+ YSV P+S   GLI WV    +++S+ +  ++R              ++
Sbjct: 61  SETSKRNLSIQTYSVIPLSPNVGLIGWVPGCDTLHSLIR--EYR------------KKRN 106

Query: 330 SVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDW---PHDVKRKVLLDLMKEVPRQLLH 386
                            IP   E  +  + S  D+       K +V    +   P   L 
Sbjct: 107 -----------------IPLNLEHRLMELKSAPDYDNLTLIQKLEVFEYALNNTPGDDLR 149

Query: 387 QEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNV 446
           + +W  S   +A+  +   ++ S+A MSMVG+ILGLGDRH  NI++D  +G ++HID+  
Sbjct: 150 KILWLKSPSSEAWLERRTNFTRSLAVMSMVGYILGLGDRHPSNIMIDRLTGKVIHIDFGD 209

Query: 447 CFDKGQ-RLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEV 505
           CF+    R K PE VPFRLT+ +  ALG++GIEGTFR  CE V++VLR+NK+ L+ +LE 
Sbjct: 210 CFEVAMHREKFPEKVPFRLTRMLVNALGVSGIEGTFRTTCEDVMNVLRENKESLMAVLEA 269

Query: 506 FVWDPLIEWT 515
           FV DPL+ W 
Sbjct: 270 FVHDPLLSWR 279

TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with other proteins to form two distinct complexes, TORC1 and TORC2. TORC1 is involved in diverse growth-related functions including protein synthesis, nutrient use and transport, autophagy and stress responses. TORC2 is involved in organizing cytoskeletal structures. Length = 280

>gnl|CDD|119431 cd05171, PIKKc_ATM, Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  214 bits (548), Expect = 2e-62
 Identities = 101/315 (32%), Positives = 146/315 (46%), Gaps = 68/315 (21%)

Query: 232 IASFSEEVSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSS 269
           ++ F +  +       PK +  +G                      + + Q VN+ L  +
Sbjct: 1   VSKFKDVFTTAGGINAPKIITCVGSDGKKYKQLLKGGDDDRQDAVMEQVFQLVNTLLERN 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKS 329
             TR   L IR Y V P+S RAG+++WVD  I +                  +GA  A  
Sbjct: 61  KETRKRKLRIRTYKVVPLSPRAGILEWVDGTIPLGEYL--------------VGATGAHE 106

Query: 330 SVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQ-- 387
                  RP D    K   A+ E             ++ + KV L + K   R +     
Sbjct: 107 RY-----RPGDWTARKCRKAMAEVQKE--------SNEERLKVFLKICKNF-RPVFRYFF 152

Query: 388 -------EIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV 440
                  + W        F  +L  Y+ SVA  S+VG+ILGLGDRH +NIL+D  + ++V
Sbjct: 153 LEKFLDPQDW--------FERRL-AYTRSVATSSIVGYILGLGDRHANNILIDEKTAEVV 203

Query: 441 HIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILL 500
           HID  + F++G+ L VPE VPFRLT+ I   +G+TG+EG FR  CE  + VLR NKD +L
Sbjct: 204 HIDLGIAFEQGKILPVPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTLEVLRDNKDAIL 263

Query: 501 MLLEVFVWDPLIEWT 515
            +LEV ++DPL  WT
Sbjct: 264 TILEVLLYDPLYSWT 278

ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transition. Patients with the human genetic disorder Ataxia telangiectasia (A-T), caused by truncating mutations in ATM, show genome instability, increased cancer risk, immunodeficiency, compromised mobility, and neurodegeneration. A-T displays clinical heterogeneity, which is correlated to the degree of retained ATM activity. Length = 279

>gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  183 bits (466), Expect = 5e-52
 Identities = 63/112 (56%), Positives = 87/112 (77%)

Query: 405 RYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRL 464
            Y+ S A MSMVG+ILGLGDRH +NIL D ++GD+VH+D+N  FDKG+ L+VPE VPFRL
Sbjct: 126 AYTRSTAVMSMVGYILGLGDRHGENILFDSNTGDVVHVDFNCLFDKGETLEVPERVPFRL 185

Query: 465 TQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR 516
           TQ +  A+G+ G+EG FR +CE  + +LR NK+ L+ +LE F+ DPL+EW++
Sbjct: 186 TQNMVDAMGVLGVEGLFRKSCEVTLRLLRSNKETLMSVLETFIHDPLVEWSK 237

ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central role in regulating the replication checkpoint. ATR stabilizes replication forks by promoting the association of DNA polymerases with the fork. Preventing fork collapse is essential in preserving genomic integrity. ATR plays a role in normal cell growth and in response to DNA damage. Length = 237

>gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]

 Score =  176 bits (447), Expect = 8e-44
 Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 58/312 (18%)

Query: 229  IVTIASFSEEVSIL-STKTKPKKLVILGQ----------------------MLLQAVNSF 265
             V I  F  EVS++ S   +P++L I G                        L++ +N  
Sbjct: 1764 FVLIERFEPEVSVVKSHLQRPRRLTIRGSDGKLYSFIVKGGDDLRQDELALQLIRLMNKI 1823

Query: 266  LRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAG 325
            L+    TR   L IR Y V P+S  +G+I+WV N  +++S+      R    +       
Sbjct: 1824 LKKDKETRRRDLWIRPYKVIPLSPGSGIIEWVPNSDTLHSI-----LREYHKRK------ 1872

Query: 326  NAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLL 385
                                I    ++K   R+ + +     +K +       + P  +L
Sbjct: 1873 -------------------NISIDQEKKLAARLDNLKL---LLKDEFFTKATLKSP-PVL 1909

Query: 386  HQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYN 445
            +     +    + +      ++ S+A  S++G+ILGLGDRH  NIL+D SSG ++HID+ 
Sbjct: 1910 YDWFSESFPNPEDWLTARTNFARSLAVYSVIGYILGLGDRHPGNILIDRSSGHVIHIDFG 1969

Query: 446  VC-FDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLE 504
               F+   R   PE VPFRLT+ I  A+G++G+EG+FR  CE     LRKN D L+ +LE
Sbjct: 1970 FILFNAPGRFPFPEKVPFRLTRNIVEAMGVSGVEGSFRELCETAFRALRKNADSLMNVLE 2029

Query: 505  VFVWDPLIEWTR 516
            +FV DPLIEW R
Sbjct: 2030 LFVRDPLIEWRR 2041

Length = 2105

>gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  154 bits (392), Expect = 2e-42
 Identities = 67/135 (49%), Positives = 89/135 (65%), Gaps = 9/135 (6%)

Query: 375 DLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDF 434
            L K    Q    E W        F+ + K Y+ S A MS+VG+ILGLGDRHLDNIL+D 
Sbjct: 97  VLKKWFWLQFPDPEQW--------FAAR-KNYTRSTAVMSIVGYILGLGDRHLDNILIDR 147

Query: 435 SSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRK 494
            +G++VHID+   F+KG+ L VPE+VPFRLT+ I   +G+TG+EG FR  CE  + V RK
Sbjct: 148 ETGEVVHIDFGCIFEKGKTLPVPELVPFRLTRNIINGMGITGVEGLFRKICEQTLEVFRK 207

Query: 495 NKDILLMLLEVFVWD 509
           ++D L+  LEVFV+D
Sbjct: 208 HRDTLIAFLEVFVYD 222

Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) domain. PIKKs have diverse functions including cell-cycle checkpoints, genome surveillance, mRNA surveillance, and translation control. Length = 222

>gnl|CDD|214538 smart00146, PI3Kc, Phosphoinositide 3-kinase, catalytic domain

 Score =  155 bits (394), Expect = 3e-42
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 42/263 (15%)

Query: 258 LLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLA 317
           LL+ +N  L+    TR   L +R Y V P   ++GLI+ V N  +++ + K ++      
Sbjct: 18  LLRLMNKLLQKDKETRRRDLHLRPYKVIPTGPKSGLIEVVPNSTTLHEILKEYR------ 71

Query: 318 QFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLM 377
                                            K+KG    +  +      K ++ L+  
Sbjct: 72  ---------------------------------KQKGKVLDLRSQTATRLKKLELFLEAT 98

Query: 378 KEVPRQLLHQEIW-CASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSS 436
            + P  +L+        +  + +    K ++ S A  S++ +ILGLGDRH DNI+LD  +
Sbjct: 99  GKFPDPVLYDWFTKKFPDPSEDYFEARKNFTRSCAGYSVITYILGLGDRHNDNIMLD-KT 157

Query: 437 GDIVHIDYNVCFDKGQRL-KVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKN 495
           G + HID+      G +L   PE VPFRLT  +   +G +G  G FR+ CE  +  LRKN
Sbjct: 158 GHLFHIDFGFILGNGPKLFGFPERVPFRLTPEMVDVMGDSGYFGLFRSLCERALRALRKN 217

Query: 496 KDILLMLLEVFVWDPLIEWTRGD 518
            ++++ LLE+ ++D L +W  G 
Sbjct: 218 SNLIMSLLELMLYDGLPDWRSGK 240

Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities. Length = 240

>gnl|CDD|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase

 Score =  150 bits (380), Expect = 2e-40
 Identities = 71/262 (27%), Positives = 108/262 (41%), Gaps = 52/262 (19%)

Query: 258 LLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLA 317
           L+  +N  L      R     +  Y V P+   +GLI+WV N  ++  +           
Sbjct: 21  LIGLMNKLLSGEGLDRR----LAAYLVIPLGPGSGLIEWVPNSTTLAEI----------- 65

Query: 318 QFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLM 377
                                            +   +++ I   ++   V         
Sbjct: 66  --------------------------------PRTYMVKKGIPLFNYSRKVLVFESR--T 91

Query: 378 KEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSG 437
              P+  L Q         + +    K +  S A MS++ +ILG GDRHLDNIL+D ++G
Sbjct: 92  ALFPKVGLLQWFVKHFPDAEEWGEARKNFVRSCAGMSVLDYILGNGDRHLDNILVDKTTG 151

Query: 438 DIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGL---TGIEGTFRANCEAVVSVLRK 494
            + HID+ +CF K +R   PE VPFRLT+    A+G    +G EG FR  CE     LR+
Sbjct: 152 KLFHIDFGLCFPKAKRGPKPERVPFRLTRPFVEAMGGYDPSGDEGLFRELCETAYEALRR 211

Query: 495 NKDILLMLLEVFVWDPLIEWTR 516
           N ++L  LL + V D L +W  
Sbjct: 212 NLNLLTNLLLLMVEDGLPDWRS 233

Some members of this family probably do not have lipid kinase activity and are protein kinases, . Length = 233

>gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  130 bits (328), Expect = 9e-34
 Identities = 45/131 (34%), Positives = 71/131 (54%)

Query: 379 EVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGD 438
                 L + +   S     +    + +  S+A  S+ G+ILG+GDRH DNI++D  +G 
Sbjct: 89  VTLEDDLSKWLKRKSPDEDEWQEARENFISSLAGYSVAGYILGIGDRHPDNIMIDLDTGK 148

Query: 439 IVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDI 498
           + HID+   F K ++    E VPFRLT  +  ALG  G+ G FR+ C   + +LR++  +
Sbjct: 149 LFHIDFGFIFGKRKKFLGRERVPFRLTPDLVNALGTGGVFGPFRSLCVKAMLILRRHAGL 208

Query: 499 LLMLLEVFVWD 509
           LL LL + + D
Sbjct: 209 LLNLLSLMLRD 219

Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI4Ks produce PtdIns(4)P, the major precursor to important signaling phosphoinositides. PIKKs have diverse functions including cell-cycle checkpoints, genome surveillance, mRNA surveillance, and translation control. Length = 219

>gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score =  111 bits (280), Expect = 4e-27
 Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 4/147 (2%)

Query: 371 KVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNI 430
             L +++K     LL + +   S   +AF      +++S+AAM +   ILG+GDRHL N 
Sbjct: 92  TPLKEILKN---DLLRRALVEMSASPEAFLSLRDHFAKSLAAMCVSHWILGIGDRHLSNF 148

Query: 431 LLDFSSGDIVHIDYNVCFDKG-QRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVV 489
           L+D  +G +V ID+   F    Q L +PE++PFRLT      +     +G  R+     +
Sbjct: 149 LVDLETGGLVGIDFGHAFGTATQFLPIPELMPFRLTPQFVNLMEPMKADGLLRSCMVHTL 208

Query: 490 SVLRKNKDILLMLLEVFVWDPLIEWTR 516
             LR  + +LL  ++VFV +P ++W  
Sbjct: 209 RALRNERHLLLSTMDVFVKEPSLDWKN 235

DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double strand breaks (DSBs) by joining together two free DNA ends of little homology. DNA-PK functions as a molecular sensor for DNA damage that enhances the signal via phosphorylation of downstream targets. It may also act as a protein scaffold that aids the localization of DNA repair proteins to the site of DNA damage. DNA-PK also plays a role in the maintenance of telomeric stability and the prevention of chromosomal end fusion. Length = 235

>gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 22/101 (21%)

Query: 232 IASFSEEVSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSS 269
           IASF + V IL +K KPKK+ + G                        L Q  N+ L   
Sbjct: 1   IASFDDAVRILGSKQKPKKITLTGSDGKKYLFLVKGGEDLRQDQRIMQLFQFCNTLLAKD 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSW 310
              R   L IR Y+V P++ R+GLI+WV+   ++  V K W
Sbjct: 61  AECRRRKLTIRTYAVIPLNSRSGLIEWVEGTTTLKPVLKKW 101

Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) domain. PIKKs have diverse functions including cell-cycle checkpoints, genome surveillance, mRNA surveillance, and translation control. Length = 222

>gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 67.7 bits (166), Expect = 5e-12
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 30/109 (27%)

Query: 232 IASFSEEVSILSTKTKPKKLVILGQ------MLL----------------QAVNSFLRSS 269
           I+ F +EV IL++  KPKK+ ++G        L                   +N  L   
Sbjct: 1   ISGFEDEVEILNSLQKPKKITLIGSDGNSYPFLCKPKDDLRKDARLMEFNTLINRLLSKD 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYS--------VFKSW 310
           P +R   L IR Y+V P++   G+I+WV N  ++ S        VF  W
Sbjct: 61  PESRRRRLYIRTYAVIPLNEECGIIEWVPNTATLRSILLEIYPPVFHEW 109

ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central role in regulating the replication checkpoint. ATR stabilizes replication forks by promoting the association of DNA polymerases with the fork. Preventing fork collapse is essential in preserving genomic integrity. ATR plays a role in normal cell growth and in response to DNA damage. Length = 237

>gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 66.6 bits (163), Expect = 1e-11
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 22/94 (23%)

Query: 232 IASFSEEVSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSS 269
           I  F E V +LS+  KPK++ I G                      Q L   +N+ L   
Sbjct: 1   IVGFDERVLVLSSLRKPKRITIRGSDEKEYPFLVKGGEDLRQDQRIQQLFGVMNNILAQD 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISI 303
            A R  +L +R Y V P++ R GLI+W++N   +
Sbjct: 61  TACRQRALQLRTYQVIPMTPRFGLIEWLENTTPL 94

DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double strand breaks (DSBs) by joining together two free DNA ends of little homology. DNA-PK functions as a molecular sensor for DNA damage that enhances the signal via phosphorylation of downstream targets. It may also act as a protein scaffold that aids the localization of DNA repair proteins to the site of DNA damage. DNA-PK also plays a role in the maintenance of telomeric stability and the prevention of chromosomal end fusion. Length = 235

>gnl|CDD|202180 pfam02260, FATC, FATC domain

 Score = 58.6 bits (143), Expect = 6e-11
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 1958 NLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
             LS+ +QVD L+ +AT  +NL  MY GW PW 
Sbjct: 2    PLSVEQQVDRLISEATDPENLAQMYIGWCPWW 33

The FATC domain is named after FRAP, ATM, TRRAP C-terminal. The solution structure of the FATC domain suggests it plays a role in redox-dependent structural and cellular stability. Length = 33

>gnl|CDD|119423 cd05163, TRRAP, TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 59.2 bits (144), Expect = 4e-09
 Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 2/151 (1%)

Query: 366 HDVKRKVLLDLMKE-VPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGD 424
           ++ K ++  ++ K+ VP  +L   I      ++ + L  K+++  +A +S + +IL + +
Sbjct: 101 YEDKLEIYNEIQKDMVPDTILKNYILSTFPTYQDYWLFRKQFTYQLALLSFMTYILSINN 160

Query: 425 RHLDNILLDFSSGDIVHIDYNVCFDKGQRLKV-PEIVPFRLTQTIEAALGLTGIEGTFRA 483
           R+ D I +   +G++   D     +  + L    E VPFRLT  I+  +G  G+EG   +
Sbjct: 161 RNPDKIFISRDTGNVYQSDLLPSINNNKPLFHNNEPVPFRLTPNIQHLIGPIGLEGILTS 220

Query: 484 NCEAVVSVLRKNKDILLMLLEVFVWDPLIEW 514
           +  A+   L + +  L   L++F+ D LI W
Sbjct: 221 SMMAIARCLTEPEFDLENALQLFIRDELIAW 251

TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replication, and DNA repair. TRRAP also exists in non-HAT complexes such as the p400 and MRN complexes, which are implicated in ATP-dependent remodeling and DNA repair, respectively. Length = 253

>gnl|CDD|119428 cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 59.1 bits (144), Expect = 7e-09
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 25/123 (20%)

Query: 397 KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY---------NVC 447
           + F    K + ES+A  S++ ++L + DRH  NIL+D + G I+HID+         NV 
Sbjct: 120 ERFREAQKNFIESLAGYSLICYLLQIKDRHNGNILID-NDGHIIHIDFGFMLSNSPGNVG 178

Query: 448 FDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGT----FRANCEAVVSVLRKNKDILLMLL 503
           F         E  PF+LTQ     +G  G+       F+         LRK+ D +++L+
Sbjct: 179 F---------ETAPFKLTQEYIEVMG--GVNSDLFNYFKKLFLKGFMALRKHVDRIILLV 227

Query: 504 EVF 506
           E+ 
Sbjct: 228 EIM 230

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KIIIbeta also functions in the genesis, transport, and exocytosis of synaptic vesicles. The Drosophila PI4KIIIbeta is essential for cytokinesis during spermatogenesis. Length = 293

>gnl|CDD|119427 cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 53.4 bits (129), Expect = 5e-07
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 4/67 (5%)

Query: 409 SVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD--KGQRLKVPEIVPFRLTQ 466
           S+AA S++ ++L + DRH  NI++D   G I+HID+   F+   G  LK  E  PF+LT+
Sbjct: 151 SMAAYSLISYLLQIKDRHNGNIMID-DDGHIIHIDFGFIFEISPGGNLKF-ESAPFKLTK 208

Query: 467 TIEAALG 473
            +   +G
Sbjct: 209 EMVQIMG 215

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling molecule. Vertebrate PI4KIIIalpha is also part of a signaling complex associated with P2X7 ion channels. The yeast homolog, Stt4p, is also important in regulating the conversion of phosphatidylserine to phosphatidylethanolamine at the ER and Golgi interface. Mammalian PI4KIIIalpha is highly expressed in the nervous system. Length = 311

>gnl|CDD|119422 cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 53.0 bits (128), Expect = 9e-07
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 6/108 (5%)

Query: 402 KLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVP 461
            +  + +S A   ++ +ILG+GDRHLDN+LL    G + HID+      G+  K P   P
Sbjct: 186 VMDTFVKSCAGYCVITYILGVGDRHLDNLLLT-KDGKLFHIDFGYIL--GRDPK-PFPPP 241

Query: 462 FRLTQTIEAALGLTGIEG--TFRANCEAVVSVLRKNKDILLMLLEVFV 507
            +L + +  A+G    EG   F++ C    ++LRK+ +++L L  + V
Sbjct: 242 MKLCKEMVEAMGGAQSEGYQEFKSYCCEAYNILRKSANLILNLFSLMV 289

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-terminal ATP-binding cataytic domain. They phosphorylate only the substrate PtdIns. They interact with a regulatory subunit, Vps15, to form a membrane-associated complex. Class III PI3Ks are involved in protein and vesicular trafficking and sorting, autophagy, trimeric G-protein signaling, and phagocytosis. Length = 350

>gnl|CDD|119433 cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 51.5 bits (123), Expect = 3e-06
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 403 LKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD------KGQRLKV 456
           ++ ++ S A   +  ++LG+GDRH DNI++   +G + HID+             +R +V
Sbjct: 193 IEEFTLSCAGYCVATYVLGIGDRHSDNIMVR-KNGQLFHIDFGHILGNFKSKFGIKRERV 251

Query: 457 PEIVPFRLTQTI-EAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT 515
           P I+ +     I +   G T   G FR  CE    +LRKN ++ + L  + +   L E T
Sbjct: 252 PFILTYDFIHVIQQGKTGNTEKFGRFRQYCEDAYLILRKNGNLFITLFALMLTAGLPELT 311

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and delta) and IB (gamma). Class IA enzymes contain an N-terminal p85 binding domain, a Ras binding domain, a lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-terminal ATP-binding cataytic domain. They associate with a regulatory subunit of the p85 family and are activated by tyrosine kinase receptors. In addition, PI3Kbeta can also be activated by G-protein-coupled receptors. Deletion of PI3Kbeta in mice results in early lethality at around day three of development. PI3Kbeta plays an important role in regulating sustained integrin activation and stable platelet agrregation, especially under conditions of high shear stress. Length = 362

>gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]

 Score = 50.6 bits (121), Expect = 1e-05
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 1931 RGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989
              +N   ++VL R  +KL  +D  +  +L I + V+ L+ QAT    L  MY GW P+ 
Sbjct: 2047 EIQNNEIVNVLERFRLKLSEKDAEKFVDLLINKSVESLITQATDPFQLATMYIGWMPFW 2105

Length = 2105

>gnl|CDD|119419 cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 47.0 bits (112), Expect = 6e-05
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 404 KRYS--ESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDK--GQRLKVPEI 459
            RY+  ES+A  S++ ++L + DRH  NILLD S G I+HID+    D   G  L   E 
Sbjct: 123 ARYNFIESMAGYSLLCYLLQIKDRHNGNILLD-SDGHIIHIDFGFILDSSPGNNLGF-EP 180

Query: 460 VPFRLTQ 466
             F+ T+
Sbjct: 181 AAFKFTK 187

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. Length = 289

>gnl|CDD|119417 cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 47.2 bits (113), Expect = 7e-05
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 17/96 (17%)

Query: 419 ILGLGDRHLDNILLDFSSGDIVHIDY-----NVCFDK---GQRLKVPEIVPFRLTQTIEA 470
           +LG+GDRH DNI+L   +G + HID+     N  F K    +R    E  PF LT  +  
Sbjct: 204 VLGIGDRHNDNIMLT-KTGHLFHIDFGHFLGN--FKKKFGIKR----ERAPFVLTPDMAY 256

Query: 471 ALGLTGIE--GTFRANCEAVVSVLRKNKDILLMLLE 504
            +G    E    F   C    ++LRK+ ++ + L  
Sbjct: 257 VMGGGDSEKFQRFEDLCCKAYNILRKHGNLFINLFS 292

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. Class II PI3Ks comprise three catalytic isoforms that do not associate with any regulatory subunits. They selectively use PtdIns as a susbtrate to produce PtsIns(3)P. Length = 352

>gnl|CDD|119426 cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 47.1 bits (112), Expect = 7e-05
 Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 28/142 (19%)

Query: 376 LMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFS 435
           LMK  P +L +++   A E F            S A   +  ++LG+ DRH DNI+L   
Sbjct: 173 LMKHNPSELEYEK---AVENF----------IYSCAGCCVATYVLGICDRHNDNIMLT-K 218

Query: 436 SGDIVHIDYNVCFDKGQ------RLKVPEIVPFRLTQTIEAALGLTGIEGT----FRANC 485
           SG + HID+       Q      R    +  PF  T  +   +            F   C
Sbjct: 219 SGHMFHIDFGKFLGHAQMFGGFKR----DRAPFVFTSDMAYVINGGDKPTQRFQDFVDLC 274

Query: 486 EAVVSVLRKNKDILLMLLEVFV 507
               +++RK+ ++LL LL +  
Sbjct: 275 CRAYNIIRKHANLLLNLLRMMA 296

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 domain, a PI3K homology domain of unknown function, an ATP-binding cataytic domain, a Phox homology (PX) domain, and a second C2 domain at the C-terminus. They are activated by a variety of stimuli including chemokines, cytokines, lysophosphatidic acid (LPA), insulin, and tyrosine kinase receptors. Length = 353

>gnl|CDD|119425 cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 45.9 bits (109), Expect = 1e-04
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 9/109 (8%)

Query: 403 LKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD-KGQRLKVP-EIV 460
           ++ ++ S A   +   +LG+GDRH DNI++   +G + HID+         +  +  E V
Sbjct: 197 IEEFTLSCAGYCVATFVLGIGDRHNDNIMVK-ETGQLFHIDFGHILGNYKSKFGINRERV 255

Query: 461 PFRLTQTIEAALGLTGIEGT------FRANCEAVVSVLRKNKDILLMLL 503
           PF LT      +G    + T      F+  CE     LR++ ++L++L 
Sbjct: 256 PFVLTPDFVHVIGRGKKDNTSEHFQRFQDLCEKAYLALRRHGNLLIILF 304

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates PtdIns and PtdIns(4)P. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and delta) and IB (gamma). Length = 366

>gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 44.2 bits (105), Expect = 2e-04
 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 25/101 (24%)

Query: 232 IASFSEEVSILSTKTKPKKLVILG----------------------QMLLQAVNSFLRSS 269
           IA   +   I+ +KT+PKKL ++G                         ++ +N  L+  
Sbjct: 1   IAIDVKICRIMPSKTRPKKLTLIGADGKEYRILFKNGDDLRQDERVLQFIRLMNKILKKE 60

Query: 270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSW 310
                    +  YSV P+S R+GLI+ V   +++      W
Sbjct: 61  LGLDLF---LTTYSVIPLSPRSGLIEVVPGSVTLEDDLSKW 98

Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. PI4Ks produce PtdIns(4)P, the major precursor to important signaling phosphoinositides. PIKKs have diverse functions including cell-cycle checkpoints, genome surveillance, mRNA surveillance, and translation control. Length = 219

>gnl|CDD|119434 cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 44.3 bits (104), Expect = 6e-04
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)

Query: 403 LKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-----NVCFDKG-QRLKV 456
           ++ ++ S A   +  ++LG+GDRH DNI++   SG + HID+     N     G  R +V
Sbjct: 193 IEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKTKFGINRERV 251

Query: 457 PEIVPFRLTQTIEAALGLTGIEGT---FRANCEAVVSVLRKNKDILLMLL 503
           P I+ +     I+   G T        FR  CE    +LR++  + L L 
Sbjct: 252 PFILTYDFVHVIQQ--GKTNNSEKFERFRGYCEQAYKILRRHGTLFLHLF 299

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and delta) and IB (gamma). Class IA enzymes contain an N-terminal p85 binding domain, a Ras binding domain, a lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-terminal ATP-binding cataytic domain. They associate with a regulatory subunit of the p85 family and are activated by tyrosine kinase receptors. PI3Kdelta is mainly expressed in immune cells and plays an important role in cellular and humoral immunity. It plays a major role in antigen receptor signaling in B-cells, T-cells, and mast cells. It regulates the differentiation of peripheral helper T-cells and controls the development and function of regulatory T-cells. Length = 361

>gnl|CDD|119420 cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

 Score = 41.8 bits (98), Expect = 0.003
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 8/112 (7%)

Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 193 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 251

Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLL 503
            E VPF LT      +G +G + +     F+  C      LR + ++L++L 
Sbjct: 252 KERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILF 303

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and delta) and IB (gamma). PI3Kgamma associates with one of two regulatory subunits, p101 and p84. It is activated by G-protein-coupled receptors (GPCRs) by direct binding to their betagamma subunits. It contains an N-terminal Ras binding domain, a lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-terminal ATP-binding cataytic domain. PI3Kgamma signaling controls diverse immune and vascular functions including cell recruitment, mast cell activation, platelet aggregation, and smooth muscle contractility. Length = 365

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1989
cd05170	307	PIKKc_SMG1 Suppressor of morphogenetic effect on g	100.0
KOG0891	2341	consensus DNA-dependent protein kinase [Replicatio	100.0
KOG0890	2382	consensus Protein kinase of the PI-3 kinase family	100.0
KOG0892	2806	consensus Protein kinase ATM/Tel1, involved in tel	100.0
COG5032	2105	TEL1 Phosphatidylinositol kinase and protein kinas	100.0
cd05169	280	PIKKc_TOR TOR (Target of rapamycin), catalytic dom	100.0
cd05171	279	PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat	100.0
cd05163	253	TRRAP TRansformation/tRanscription domain-Associat	100.0
cd05172	235	PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK)	100.0
cd00892	237	PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela	100.0
cd05164	222	PIKKc Phosphoinositide 3-kinase-related protein ki	100.0
cd00142	219	PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f	100.0
smart00146	202	PI3Kc Phosphoinositide 3-kinase, catalytic domain.	100.0
PF00454	235	PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina	100.0
cd00891	352	PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic	100.0
cd05166	353	PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I	100.0
cd00896	350	PI3Kc_III Phosphoinositide 3-kinase (PI3K), class	100.0
cd05165	366	PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I,	100.0
KOG0889	3550	consensus Histone acetyltransferase SAGA, TRRAP/TR	100.0
cd05168	293	PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T	100.0
cd05177	354	PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c	100.0
cd05173	362	PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl	100.0
cd05174	361	PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c	100.0
cd00894	365	PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c	100.0
cd00893	289	PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I	100.0
cd05176	353	PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c	100.0
cd05167	311	PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K),	100.0
cd05175	366	PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c	100.0
cd00895	354	PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl	100.0
KOG0904	1076	consensus Phosphatidylinositol 3-kinase catalytic	99.92
KOG0906	843	consensus Phosphatidylinositol 3-kinase VPS34, inv	99.91
KOG0905	1639	consensus Phosphoinositide 3-kinase [Signal transd	99.88
KOG0903	847	consensus Phosphatidylinositol 4-kinase, involved	99.84
KOG0902	1803	consensus Phosphatidylinositol 4-kinase [Signal tr	99.81
PTZ00303	1374	phosphatidylinositol kinase; Provisional	99.69
PF08771	100	Rapamycin_bind: Rapamycin binding domain; InterPro	99.44
PF02260	33	FATC: FATC domain; InterPro: IPR003152 The FATC do	99.34
KOG0891	2341	consensus DNA-dependent protein kinase [Replicatio	98.89
KOG0890	2382	consensus Protein kinase of the PI-3 kinase family	98.69
KOG0892	2806	consensus Protein kinase ATM/Tel1, involved in tel	98.28
COG5032	2105	TEL1 Phosphatidylinositol kinase and protein kinas	98.01
PF02260	33	FATC: FATC domain; InterPro: IPR003152 The FATC do	88.01

>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=5e-65  Score=591.85  Aligned_cols=285  Identities=51%  Similarity=0.933  Sum_probs=258.2

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      |++|.|+|.|++||++||||+|+|+                      |||++||.+|.++++|++|+|.|++|.||||++
T Consensus         1 I~~f~~~v~V~~Sk~~Pkri~~~gsDG~~y~fLlK~~dDLR~D~RimQlf~l~N~ll~~~~~~~~r~L~i~tY~ViPLs~   80 (307)
T cd05170           1 IESVGSTVTILPTKTKPKKLAFLGSDGKKYTYLFKGREDLHLDERIMQFLSIVNTMFASIKDQESPRFRARHYSVTPLGP   80 (307)
T ss_pred             CccccCeEEEEecCCCceEEEEECCCCCEEEEEecCCCcccHHHHHHHHHHHHHHHHHhChhhhccCceeecceEEEcCC
Confidence            6799999999999999999999997                      999999999999999999999999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+|++||++||+.|+++.++....................+|.++||+++.+.+++.++....++.+|+.+++
T Consensus        81 ~~GLIEwv~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  160 (307)
T cd05170          81 RSGLIQWVDGATPLFGLYKRWQQREAVLQAQKSQVGYQNPQIPGIVPRPSDLFYNKITPALKAHGLSLDVSRRDWPLSVL  160 (307)
T ss_pred             CcceEEEcCCChhHHHHHHHHHHhhhhhhhhhhccccccccccccccchhHHHHHHHHHHHHhhccccccchhhccHHHH
Confidence            99999999999999999999998876643211000000000111234678899999988888777655556788999999


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                      +++|.++++++|+++|++++|..++++++||.+|++|++|+|+|||+|||||||||||+||||++.||+|+|||||+||+
T Consensus       161 ~~~~~~i~~~~~~~~l~~~~~~~~~~~~~w~~~r~~f~~s~A~~s~~~yilglgDRh~~NIli~~~tG~v~hiDf~~~f~  240 (307)
T cd05170         161 RQVLDELMQETPKDLLARELWCSSTTSSEWWSVTQRYARSTAVMSMIGYVIGLGDRHLDNVLIDLKTGEVVHIDYNVCFE  240 (307)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCccEEEEcCCCcEEEEeeHhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          450 KGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       450 kGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      +|+.+++||.|||||||||+++||+.|++|.|+.+|+.++++||++++.|+++|++|+||||++|+.
T Consensus       241 ~~~~l~~pE~VPFRLT~~~~~~lg~~g~~G~f~~~~~~~~~~Lr~~~~~l~~~l~~fv~DPl~~W~~  307 (307)
T cd05170         241 KGKSLRIPEKVPFRMTQNIETALGLTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTA  307 (307)
T ss_pred             ccCCCCCCCCCCeeeCHHHHHHhCCCCCchhHHHHHHHHHHHHHcCHHHHHHHHHHHhhCccccccC
Confidence            9998999999999999999999999999999999999999999999999999999999999999973

SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno

>KOG0891 consensus DNA-dependent protein kinase [Replication, recombination and repair]

Probab=100.00  E-value=2e-64  Score=676.32  Aligned_cols=535  Identities=29%  Similarity=0.460  Sum_probs=431.4

Q ss_pred             ccccCCceeEeceeccccccccCChHHHHHHHHHHHhhchhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHH
Q 037207            2 LAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRIN   81 (1989)
Q Consensus         2 IG~~~PQAVvYPL~V~~~s~~~~~se~a~~Il~~Lr~~hP~LV~ev~l~v~ELiRIavLW~E~Wl~~L~qL~~dv~rRl~   81 (1989)
                      +|+.||||++||++|++++....++..+..|+++|+.++|.||+++.++.+|++|++++|+|.|++.++           
T Consensus      1770 ig~~~pqA~iy~ltvas~s~~~~r~~~a~~ile~m~~~~~~Lv~~a~lvs~elir~a~lwhe~w~e~ld----------- 1838 (2341)
T KOG0891|consen 1770 IGRAHPQALVYPLTVASKSKSVARQKAALSILEKMREHSPTLVRQARLVSEELIRVAILWHEQWHEGLE----------- 1838 (2341)
T ss_pred             hhhcchhhhhHHHHHHHhcchHHHHHhHHHHHHHHHHhhHhhhhhhhhhHHHHHHHHhhhHhhhhhccH-----------
Confidence            799999999999999999999999999999999999999999999999999999999999999999994           


Q ss_pred             HHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHhhcCCc--c
Q 037207           82 VLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPP--A  159 (1989)
Q Consensus        82 ~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~~Le~~~a~Ts~~peTphE~~F~k~yg~~L~~Aie~lk~~~--~  159 (1989)
                          |+.|+|.      .+.   +..++++++.|++..++       +.|.|..|..|++.||.++..+.+......  +
T Consensus      1839 ----eAsr~yf------~~~---nv~~m~~~l~p~~~~l~-------~~~~t~~e~sFqqt~g~dl~ea~~~~~~~~~~~ 1898 (2341)
T KOG0891|consen 1839 ----EASRLYF------SDH---NVEGMFAVLRPLHEMLE-------RGPQTLKEHSFQQTYGRDLKEAYEWVQKFEQSG 1898 (2341)
T ss_pred             ----HHHHHHh------hHh---hHHHHHHHHhHHHHHhh-------cCCcchhhhhhHHhhChhhHHHHHHHHHHHhcc
Confidence                6788873      233   47788888999888776       567799999999999999999988766432  3


Q ss_pred             ccchHHHHHHHHHHHHHHHHhhh-ccCcccccccChhhhccCCCCCCCCCcccccccccCCCCccccCCCcEEEEEEece
Q 037207          160 SAAALGDVWRPFDNIAASLASHQ-RKSSVSLSEVAPQLSLLSSSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEE  238 (1989)
Q Consensus       160 ~~~~L~e~W~~fk~I~k~L~~~~-kkssL~LedISP~La~fs~seIeVPGqY~~~~~s~~d~~~t~~~~~~VrI~rF~p~  238 (1989)
                      ...++++.|+.+.+.++++.... ...++.+..+||.|..-++.++++||+|.+             ..++++|.+|.++
T Consensus      1899 ~~~dL~qawdly~~vf~ki~~ql~~l~sl~l~~vSp~L~~~~dlel~vPgty~~-------------~~~~i~i~~f~~~ 1965 (2341)
T KOG0891|consen 1899 DVKDLNQAWDIYYNVFKKIRKQLPQLTSLDLQYVSPKLLSAKDLELAVPGTYDP-------------GKPIIRIQSFEPK 1965 (2341)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcccccccccceeccCCccCC-------------CceEEehhhccHH
Confidence            45689999999988888887644 446899999999999999999999999964             4789999999999


Q ss_pred             eEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeee
Q 037207          239 VSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQW  296 (1989)
Q Consensus       239 V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEW  296 (1989)
                      +.|+.||+||||+.|+|+                      |+|++||+++..+.+|.||++.++.|.|+|++++.|||+|
T Consensus      1966 ~~vitskqRprkl~i~gs~g~d~~~~lkghed~rQD~RvmQLf~Lvn~ll~~d~~~~rr~L~iq~Y~~i~ls~~sgL~gW 2045 (2341)
T KOG0891|consen 1966 FNVITSKQRPRKLVIRGSDGKDYQYLLKGHEDLRQDERVMQLFGLVNTLLANDSETFRRNLTIQRYSVIPLSPDSGLIGW 2045 (2341)
T ss_pred             HHHHHHHhhhHHHhhcccchhhHHHHhhchhhhhhHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhcCCCCCCceeee
Confidence            999999999999999998                      9999999999999999999999999999999999999999


Q ss_pred             cCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHH
Q 037207          297 VDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDL  376 (1989)
Q Consensus       297 VpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL  376 (1989)
                      ||+++|++.++++|+..+.+.-       +.          +    ...   .++ ..    .........+|.++|+..
T Consensus      2046 v~~~dtlh~L~r~~r~~k~i~l-------~~----------e----h~~---~~~-~~----l~~~~ltl~qk~~vfe~~ 2096 (2341)
T KOG0891|consen 2046 VPNCDTLHTLIREYREKKKIPL-------NI----------E----HRV---MLQ-MA----PDYDHLTLMQKVEVFEYA 2096 (2341)
T ss_pred             ecccccHHHHHHHHHHhhccCC-------cc----------h----HHH---HHh-cC----ccccchhhhhHHhHhHHH
Confidence            9999999999999987652100       00          0    000   000 00    001122346788999999


Q ss_pred             HhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccccC-CCCc
Q 037207          377 MKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG-QRLK  455 (1989)
Q Consensus       377 ~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekG-krL~  455 (1989)
                      ...++++++++.+|.++++++.|+.+|.+||+|+|+|||+|||+|+|||||+|+|+++.||+++|||||+||+.. .+.+
T Consensus      2097 ~~~t~G~dl~~~lwlkS~ssEaw~~rrt~yt~S~A~msmvgyilGlGdrhpsNlmldr~tgkvihidfgdcfevA~~rek 2176 (2341)
T KOG0891|consen 2097 LSNTQGDDLYKVLWLKSPSSEAWLDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLTGKVIHIDFGDCFEVAMLREK 2176 (2341)
T ss_pred             hhcCcHHHHHHHHHHhCCChhHHHHHhhhhHHHHHHHHHHHHHhhccccchhhhhhhhcccceEEechHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999 5788


Q ss_pred             CCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccccCcCCcc--ccCC-ccccc
Q 037207          456 VPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDA--AIGG-EERKG  532 (1989)
Q Consensus       456 vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~~~~~~~a--~~~g-~er~~  532 (1989)
                      +||.+||||||+++++|.++|.+|.|+.+|+.+++++|.|++.+++++++|+|||+++|+..+.....  ..++ ....-
T Consensus      2177 ~pe~~pfRlTrmli~amev~gl~g~~~~t~e~v~~~lr~~~~sl~a~leafvydplinwr~~~~~~~~~~~~~~~~~~~~ 2256 (2341)
T KOG0891|consen 2177 FPEKVPFRLTRMLINAMEVTGIEGTYRITCEHVMRVLRTNKESLMAVLEAFVYDPLINWRLDDVLSPGKDEEEVGEKDPL 2256 (2341)
T ss_pred             ccccccHHHHHHHHHhHHHHhhhhHHHHHHHHHHHhhcCChHHHHHHHHhhhcccchhhhcccccchhhhhcccCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999875322111  1111 11110


Q ss_pred             hhhhhhhhhhhhhhhhhccchhhh-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHH
Q 037207          533 MELAVSLSLFASRVQEIRVPLQEH-HDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAE  611 (1989)
Q Consensus       533 me~~~slslf~sRv~ei~~~lq~~-~d~l~~~l~~a~~aL~~~l~~L~~~e~~s~~~~~~~~~~~~~l~~E~~v~~Lv~e  611 (1989)
                      +..+.... -.++..+........ ..+  ...+.+...+.+..+++.+-          +.....-+++.+.|..|.+.
T Consensus      2257 ~~~~e~~~-~~a~~~~~~~~~~~~~~~e--~~n~~~~~vl~~~~~kltg~----------~~~~~~~l~v~~qv~~l~~q 2323 (2341)
T KOG0891|consen 2257 KNRKELGL-PRAMAGEEIAVLESSVKPE--ALNARAIQVLKRISDKLTGR----------DFVHEEPLDVPEQVEKLIQQ 2323 (2341)
T ss_pred             cchhhhcc-HHhhhcccccccccccccc--ccChhhHHHHHhccccccee----------eccCcccCcHHHHHHHHHHh
Confidence            11111000 000111100111111 000  11122333444444544443          23334557788899999999


Q ss_pred             HhcchhhhhhhH
Q 037207          612 ANCNAEKIRASF  623 (1989)
Q Consensus       612 A~~~~enl~~~~  623 (1989)
                      ||+ ++|+|..|
T Consensus      2324 ats-~e~lc~~y 2334 (2341)
T KOG0891|consen 2324 ATS-PENLCQCY 2334 (2341)
T ss_pred             hcC-hHhhhccc
Confidence            999 99999887

>KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.7e-62  Score=633.92  Aligned_cols=403  Identities=29%  Similarity=0.457  Sum_probs=309.9

Q ss_pred             HHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHhhhcc------CcccccccChhhhcc-CCCCCCCCCccc
Q 037207          139 FHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRK------SSVSLSEVAPQLSLL-SSSDVPMPGFEK  211 (1989)
Q Consensus       139 F~k~yg~~L~~Aie~lk~~~~~~~~L~e~W~~fk~I~k~L~~~~kk------ssL~LedISP~La~f-s~seIeVPGqY~  211 (1989)
                      +..++..+..++.+.++.......+++.+...+..++++|-+.+++      +.+.|+.=-+.|... ..++|-||-+-.
T Consensus      1936 ~kS~~p~R~~R~keIL~k~~~~~~~~~~l~~da~~lTe~L~~lcn~~v~~ss~~~sl~t~F~kl~~~~~~s~iliP~~~~ 2015 (2382)
T KOG0890|consen 1936 SKSNVPSRVERCKEILTKSRRQKPDYKKLLSDAYDLTEKLTNLCNKKVNSSSKVLSLKTDFRKLVMNRRFSDILIPLQSI 2015 (2382)
T ss_pred             HhcccHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHhcCCCCcccccccHHHHHHHhccccChhhhhhhHhhh
Confidence            5567777888888877765555668889999999999999876533      234555544555544 346777776433


Q ss_pred             ccccccCCCC-------ccccCCCcEEEEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHH
Q 037207          212 QVATSESDGG-------LTATLRGIVTIASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAV  262 (1989)
Q Consensus       212 ~~~~s~~d~~-------~t~~~~~~VrI~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLI  262 (1989)
                      -.+..+...+       .+++..+-.+|.+|++.|+|++|.||||||+++|+                      +|-.+|
T Consensus      2016 M~ptlP~~~~~~~~h~~~~~f~~~~~~IsgF~d~V~Il~SLqKPKkI~l~GsDGk~Y~~lCKpKDDLRKD~RlMeFn~li 2095 (2382)
T KOG0890|consen 2016 MDPTLPLIDNNHATHSPFPPFQSHLPYISGFSDEVKILNSLQKPKKIKLRGSDGKIYPFLCKPKDDLRKDARLMEFNELI 2095 (2382)
T ss_pred             cccccccccCcccccCCCCCCCCcchhhhcchHHHHHHHhccCCeEEEEEcCCCCEeEEEeCchhhhhhhhHHHHHHHHH
Confidence            2222111100       11222244589999999999999999999999998                      889999


Q ss_pred             HHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhh
Q 037207          263 NSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMF  342 (1989)
Q Consensus       263 NsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlf  342 (1989)
                      |.+|.||.++|||.|+||||+||||+..||+||||||+.+|++|..+.+..+|.-        ..+              
T Consensus      2096 n~lL~KD~eSRrR~L~IRTYaViPLneeCGiIEWv~nt~slR~IL~klY~~rg~~--------~~~-------------- 2153 (2382)
T KOG0890|consen 2096 NKLLRKDQESRRRKLYIRTYAVIPLNEECGIIEWVPNTASLREILDKLYMTRGKW--------MIK-------------- 2153 (2382)
T ss_pred             HHHHhhCHHHhhhcceeeEEEEeecCCccceEEecCCcchHHHHHHHHHHhcccc--------chh--------------
Confidence            9999999999999999999999999999999999999999999998876322110        000              


Q ss_pred             hhhhhHHHHhhcccccccCCCCChHHHHHHHHH-HHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcc
Q 037207          343 YGKIIPALKEKGIRRVISRRDWPHDVKRKVLLD-LMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILG  421 (1989)
Q Consensus       343 y~kl~~aLke~gi~~v~sR~dwp~evkreVF~e-L~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILG  421 (1989)
                      +     .++...++     ..-..+.+.++|.+ ++.+.|+ +|++||...+|.|..|+..|.+|+||+|||||||||||
T Consensus      2154 ~-----~l~~~~~~-----~~~~~~~~~~~F~~~~lpkfPP-VFheWFl~~FPeP~sW~~SR~~Y~rTtAVMSmVGyIlG 2222 (2382)
T KOG0890|consen 2154 K-----QLRSVHLK-----KQMAKEEKGKVFREKLLPKFPP-VFHEWFLESFPEPGSWFASRNNYARTTAVMSMVGYILG 2222 (2382)
T ss_pred             h-----HHHHhcCc-----HhhcccchhhhhHHhhcccCCc-HHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            0     01100000     00012335566654 4555666 79999999999999999999999999999999999999


Q ss_pred             cCCCCCCceEEecCCCcEEEEecccccccCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHH
Q 037207          422 LGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLM  501 (1989)
Q Consensus       422 LGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~Lls  501 (1989)
                      |||||.+|||||-.||++||+||++.|+||..|++||.||||||+||+++|||+|+||.||.+||.||+.||+|++.||+
T Consensus      2223 LGDRHgENILFDs~TGdcVHVDFnCLFnKGetlevPEiVPFRLT~NMidamGp~G~EG~Frk~cEiTLrLlR~n~e~LMS 2302 (2382)
T KOG0890|consen 2223 LGDRHGENILFDSTTGDCVHVDFNCLFNKGETLEVPELVPFRLTQNMIDAMGPLGLEGSFRKVCEITLRLLRKNRETLMS 2302 (2382)
T ss_pred             CccccccceeeecCCCcEEEEeecccccCCcccCCCCccceecchhHHhhcCCcccchhHHHHHHHHHHHHHhcchhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCccccccCcCCccccCCccccchhhhhhhhhhhhhhhhhccchhhhHHHHHhhhhHHHHHHHHHHHHHHHH
Q 037207          502 LLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQY  581 (1989)
Q Consensus       502 LLEaFVrDPLvdW~~~~~~~~a~~~g~er~~me~~~slslf~sRv~ei~~~lq~~~d~l~~~l~~a~~aL~~~l~~L~~~  581 (1989)
                      +|+.|+||||+.|.+.......       +....+      ..++..|+.+||+...  ..                   
T Consensus      2303 iL~tF~~DPlvew~~~~k~~s~-------~~i~e~------~~~i~~i~~rlqG~~~--~~------------------- 2348 (2382)
T KOG0890|consen 2303 ILETFVYDPLVEWNRPSKGRSP-------KKINED------RLVIGRIRGRLQGAMK--VD------------------- 2348 (2382)
T ss_pred             HHHHHHhCchhhccCcccCCCc-------Ccccch------HHHHhHHHHHHhccCc--CC-------------------
Confidence            9999999999999975422111       000000      1233344444444332  11                   


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHhcchhhhhhhH
Q 037207          582 ELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRASF  623 (1989)
Q Consensus       582 e~~s~~~~~~~~~~~~~l~~E~~v~~Lv~eA~~~~enl~~~~  623 (1989)
                                    +-.++.|+.|..|+++||+ +||||.||
T Consensus      2349 --------------glPLSveGq~~~LI~eATs-eenL~~MY 2375 (2382)
T KOG0890|consen 2349 --------------GLPLSVEGQASSLIEEATS-EENLSEMY 2375 (2382)
T ss_pred             --------------CCccchhhHHHHHHHHhcC-HHHHHHHH
Confidence                          3457889999999999999 99999999

>KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.8e-60  Score=621.98  Aligned_cols=340  Identities=30%  Similarity=0.470  Sum_probs=294.1

Q ss_pred             CCCcEEEEEEeceeEEecCCCCceEEEEEcH-----------------------HHHHHHHHHHhcCCccCCCccceecc
Q 037207          226 LRGIVTIASFSEEVSILSTKTKPKKLVILGQ-----------------------MLLQAVNSFLRSSPATRSHSLGIRYY  282 (1989)
Q Consensus       226 ~~~~VrI~rF~p~V~VL~SKqrPRRLtI~GS-----------------------QLFrLINsLL~kdkETRRR~L~IrtY  282 (1989)
                      ....++|.+|.++|.+..+...||.|++.||                       |+|+++|++|.++++|++|+|.||||
T Consensus      2437 ~~~~p~i~s~~~~v~~~~GinaPkiI~c~gSDG~~~kqLVK~gnDDLRQDAVMeQvF~~vN~lL~~~~et~krkL~irTY 2516 (2806)
T KOG0892|consen 2437 YGNIPTVVSFDDTVTFAGGINAPKVITCVGSDGKTYKQLVKGGNDDLRQDAVMEQVFGQVNTFLQNDRETRKRKLSIRTY 2516 (2806)
T ss_pred             cCCCceEEecccceeeecCccCCeEEEEEccCchhHHHHHhcccchHHHHHHHHHHHHHHHHHhhccHHHHhcccceeEE
Confidence            4578999999999999999999999999998                       99999999999999999999999999


Q ss_pred             eeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCC
Q 037207          283 SVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRR  362 (1989)
Q Consensus       283 sVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~  362 (1989)
                      +||||+|++|+||||.|++||++..-.                +.  +..+..++|.+.-+.+....+.+..        
T Consensus      2517 KVvPls~~sGvlEwv~~tiplgeyLv~----------------~~--~gah~ry~p~d~s~~~crk~m~~~q-------- 2570 (2806)
T KOG0892|consen 2517 KVIPLSPKAGVLEWVTNTIPLGEYLVV----------------ES--GGAHKRYRPNDWSLSKCRKLMSEVQ-------- 2570 (2806)
T ss_pred             eeeecCcccceeecccCCeehhhhhcc----------------cC--CccccccCCCCCChHHHHHHHHHHh--------
Confidence            999999999999999999999887642                11  2345567888888877766665542        


Q ss_pred             CCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEE
Q 037207          363 DWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHI  442 (1989)
Q Consensus       363 dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHI  442 (1989)
                      .-+.+.|+++|.++|+++.+ +|+.++.-++++|.+|+++|.+||+|+|+.|||||||||||||..|||||..||+||||
T Consensus      2571 ~k~~E~r~k~y~~vc~n~~P-vfryFflEkF~dP~~WFekrlaYTrsvA~sS~VGyILGLGDRH~qNILid~~taEviHI 2649 (2806)
T KOG0892|consen 2571 KKSLETRLKAYDKVCRNIRP-VFRYFFLEKFPDPADWFEKRLAYTRSVAASSMVGYILGLGDRHGQNILIDQQTAEVIHI 2649 (2806)
T ss_pred             cccHHHHHHHHHHHHhhchH-HHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHHHHhcccchhhhheeecccccceEEE
Confidence            23678999999999999765 58888889999999999999999999999999999999999999999999999999999


Q ss_pred             ecccccccCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccccCcCCc
Q 037207          443 DYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDD  522 (1989)
Q Consensus       443 DFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~~~~~~~  522 (1989)
                      |||++||+|+.+|.||.|||||||.||+.||.+||||+||.|||.||.+||++++.|+++||+|+||||++|.......-
T Consensus      2650 DlGiAFEQGkilptPE~VPFRLTRDiVdgmGItGveGvFrRccE~t~~vlR~~~~~lltileVl~yDPLf~W~msplK~~ 2729 (2806)
T KOG0892|consen 2650 DLGIAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEFTLEVLRREKESLLTILEVLLYDPLFSWLMSPLKAL 2729 (2806)
T ss_pred             eeeeehhcCCcCCCCCcccceeehhhccccCccCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcchHHHhhcHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987653221


Q ss_pred             cccCCccccchhhhhhhhhhhhhhhhhccchhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 037207          523 AAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHE  602 (1989)
Q Consensus       523 a~~~g~er~~me~~~slslf~sRv~ei~~~lq~~~d~l~~~l~~a~~aL~~~l~~L~~~e~~s~~~~~~~~~~~~~l~~E  602 (1989)
                      ....  +   ++             +--..+..+....-++-..|++++++..++|.++|+            +..+++|
T Consensus      2730 ~~q~--~---e~-------------~e~~n~~~~~~~~~~nd~~a~r~l~r~q~kl~g~e~------------g~~~sVe 2779 (2806)
T KOG0892|consen 2730 KKQK--E---ED-------------EENFNLSGNITEDASNDRNAVRALMRAQRKLDGVEQ------------GTMLSVE 2779 (2806)
T ss_pred             HHHH--h---hc-------------chhcccccchhhhhccchHHHHHHHHHHHHhhhhhc------------cccccHH
Confidence            1110  0   00             000112223333344456789999999999999977            6778899


Q ss_pred             hhHHHHHHHHhcchhhhhhhH
Q 037207          603 TSTKSMVAEANCNAEKIRASF  623 (1989)
Q Consensus       603 ~~v~~Lv~eA~~~~enl~~~~  623 (1989)
                      ++|+.|++.|++ |.||+.||
T Consensus      2780 ~qv~~LIqqA~d-psnLs~~f 2799 (2806)
T KOG0892|consen 2780 AQVQELIQQATD-PSNLSLMF 2799 (2806)
T ss_pred             HHHHHHHHHhcC-chhhhhhc
Confidence            999999999999 99999998

>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]

Probab=100.00  E-value=6.7e-59  Score=635.67  Aligned_cols=492  Identities=27%  Similarity=0.394  Sum_probs=381.0

Q ss_pred             ccccCCceeEeceeccccccccCChHHHHHHHHHHHhhchhHHHHHHHHHHHHhh-hhhccHHHHHHHHHHHHHHHHHHH
Q 037207            2 LAKLSPWCIVYPTLVDVNAYEERPSEELQHILGCLRELYPRLIQDVELMINELGN-LTVLWEELWLSTLQDLHADVMRRI   80 (1989)
Q Consensus         2 IG~~~PQAVvYPL~V~~~s~~~~~se~a~~Il~~Lr~~hP~LV~ev~l~v~ELiR-IavLW~E~Wl~~L~qL~~dv~rRl   80 (1989)
                      +|+.||||++||++++.++........+..+....+.+.|.++.+.....+|..+ ..+||++.|+..|.+++.      
T Consensus      1575 ~~~~~~~a~~~~L~~~~~s~~~~~e~~~~~~~~~~~~~~~~~v~~~~~~~~E~~~~~~~l~~~~~~~~l~q~~~------ 1648 (2105)
T COG5032        1575 IGKEHPQALVFTLRSAIESTALSKESVALSLENKSRTHDPSLVKEALELSDENIRIAYPLLHLLFEPILAQLLS------ 1648 (2105)
T ss_pred             hhhhchhhhhhhhhHHHHHhhhhhHhHHHHHhhhhhcCChhhHhHHHhhhhhhhhhhhhhhhhhHHHHHHHHHH------
Confidence            7999999999999988776666566666779999999999999999999999999 789999999999988642      


Q ss_pred             HHHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHHHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHhhc--CCc
Q 037207           81 NVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFK--TPP  158 (1989)
Q Consensus        81 ~~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~~Le~~~a~Ts~~peTphE~~F~k~yg~~L~~Aie~lk--~~~  158 (1989)
                              |+.     ....+    ...+..+-.|++...+       ..|.+..+..|+..++..+..+....-  ...
T Consensus      1649 --------r~~-----~~~~~----i~~~~~~~~~l~~~~~-------~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 1704 (2105)
T COG5032        1649 --------RLS-----SENNK----ISVALLIDKPLHEERE-------NFPSGLSLSSFQSSFLKELIKKSPRKIRKKFK 1704 (2105)
T ss_pred             --------Hhc-----ccchH----HHHHHHHHHHHHHHhc-------cccccccchhHHHHHHHHHHhhhHHHHHHHHH
Confidence                    221     00000    1123334556555443       334433367777777777666551111  011


Q ss_pred             cccchHHHHHHH----HHHHHHHHHhhhccCcccccccChhhhccCC-CCCCCCCcccccccccCCCCccccCCCcEEEE
Q 037207          159 ASAAALGDVWRP----FDNIAASLASHQRKSSVSLSEVAPQLSLLSS-SDVPMPGFEKQVATSESDGGLTATLRGIVTIA  233 (1989)
Q Consensus       159 ~~~~~L~e~W~~----fk~I~k~L~~~~kkssL~LedISP~La~fs~-seIeVPGqY~~~~~s~~d~~~t~~~~~~VrI~  233 (1989)
                      .....+...|+.    ++++.+.+....   ......++|.+..++. .++++||+|..             ..+.|+|.
T Consensus      1705 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~~~P~~~~~-------------~k~~v~I~ 1768 (2105)
T COG5032        1705 IDISLLNLSRKLYISVLRSIRKRLKRLL---ELRLKKVSPKLLLFHAFLEIKLPGQYLL-------------DKPFVLIE 1768 (2105)
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHhHHHH---HHHhcccCHHHHhccccccccCCccccc-------------CCCCceEE
Confidence            122233344444    455555554432   2333449999999998 89999999864             25789999


Q ss_pred             EEeceeEEecC-CCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecCC
Q 037207          234 SFSEEVSILST-KTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGR  290 (1989)
Q Consensus       234 rF~p~V~VL~S-KqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~  290 (1989)
                      +|.|++.++++ +++|||++++|+                      ||+++||++|.++++|+||++.|++|+|||+||+
T Consensus      1769 ~f~p~~~~~~~~~~~p~rl~~rgsdG~~y~~i~K~~dDlRQD~~~~Ql~~l~n~iL~~~~~~~~R~l~i~~Y~Vipls~~ 1848 (2105)
T COG5032        1769 RFEPEVSVVKSHLQRPRRLTIRGSDGKLYSFIVKGGDDLRQDELALQLIRLMNKILKKDKETRRRDLWIRPYKVIPLSPG 1848 (2105)
T ss_pred             EecCceeeeecccccceEEEEEecCCcEEEEEeecCccchHHHHHHHHHHHHHHHHHhChHhhhcCccceeeeeEeccCC
Confidence            99999999988 899999999998                      9999999999999999999999999999999999


Q ss_pred             cceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHHH
Q 037207          291 AGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKR  370 (1989)
Q Consensus       291 sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkr  370 (1989)
                      +|+||||||++||++|.++++.+.++.....                      .++.+..+..           ....+.
T Consensus      1849 ~GiIe~vpn~~tl~sI~~~~~~~~~i~~~~~----------------------~~~~~~~~~~-----------~~~~~~ 1895 (2105)
T COG5032        1849 SGIIEWVPNSDTLHSILREYHKRKNISIDQE----------------------KKLAARLDNL-----------KLLLKD 1895 (2105)
T ss_pred             cceEEEecCcchHHHHHHHHhhhcCCChhHH----------------------hhhhhhhhhh-----------cccchh
Confidence            9999999999999999999998765422111                      0111111111           123466


Q ss_pred             HHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEeccccccc
Q 037207          371 KVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDK  450 (1989)
Q Consensus       371 eVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFek  450 (1989)
                      ++|.....++| .+|++|||..++++.+||.+|+||++|+|+|||+|||||+|||||+|||||+.||+|+|||||+||+.
T Consensus      1896 ~~~~~~~~~~~-~~l~~~f~~~f~~~~~w~~aR~Ny~~SlA~ySvigYiLglgDRH~~NIliD~~sG~viHiDFg~il~~ 1974 (2105)
T COG5032        1896 EFFTKATLKSP-PVLYDWFSESFPNPEDWLTARTNFARSLAVYSVIGYILGLGDRHPGNILIDRSSGHVIHIDFGFILFN 1974 (2105)
T ss_pred             HHhhhhhcCCC-chHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCceEEEEcCCCcEEEehHHHHHhc
Confidence            77777778889 89999999999999999999999999999999999999999999999999999999999999888765


Q ss_pred             -CCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccccCcCCccccCCcc
Q 037207          451 -GQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEE  529 (1989)
Q Consensus       451 -GkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~~~~~~~a~~~g~e  529 (1989)
                       ++.+++||.|||||||||+++||++|+||.||.+|+.++++||+|.+.|++++++|++|||++|.......        
T Consensus      1975 ~p~~~~~pE~vPFrLT~~iv~~mg~~g~EG~Fr~~c~~~~~~LRk~~~~L~~~le~f~~d~l~~W~~~p~~~-------- 2046 (2105)
T COG5032        1975 APGRFPFPEKVPFRLTRNIVEAMGVSGVEGSFRELCETAFRALRKNADSLMNVLELFVRDPLIEWRRLPCFR-------- 2046 (2105)
T ss_pred             CCCCCCCcccCcHhhhHHHHHhcCccchhhHHHHHHHHHHHHHhccHHHHHHHHHHHhcCcchhhhcCcccc--------
Confidence             58999999999999999999999999999999999999999999999999999999999999999221110        


Q ss_pred             ccchhhhhhhhhhhhhhhhhccchhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHH
Q 037207          530 RKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMV  609 (1989)
Q Consensus       530 r~~me~~~slslf~sRv~ei~~~lq~~~d~l~~~l~~a~~aL~~~l~~L~~~e~~s~~~~~~~~~~~~~l~~E~~v~~Lv  609 (1989)
                       .++.                              ..+...++|+-.++.+.          +..+...++++.++..++
T Consensus      2047 -~~~~------------------------------~~~~~v~~rf~~kl~~~----------~~~~~~~l~I~~sv~~li 2085 (2105)
T COG5032        2047 -EIQN------------------------------NEIVNVLERFRLKLSEK----------DAEKFVDLLINKSVESLI 2085 (2105)
T ss_pred             -chHH------------------------------HHHHHHHHHHHHHhhhh----------hhhhhcCCcHHHHHHHHH
Confidence             0000                              01122334444433332          233446678999999999


Q ss_pred             HHHhcchhhhhhhH
Q 037207          610 AEANCNAEKIRASF  623 (1989)
Q Consensus       610 ~eA~~~~enl~~~~  623 (1989)
                      ..|++ +.|+|.||
T Consensus      2086 ~~a~d-~~~L~~~y 2098 (2105)
T COG5032        2086 TQATD-PFQLATMY 2098 (2105)
T ss_pred             HHHcC-HHHHHhhc
Confidence            99999 99999998

>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=1.1e-59  Score=540.68  Aligned_cols=256  Identities=37%  Similarity=0.677  Sum_probs=229.0

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      |.+|+|+|.|++|+++||||+|+|+                      |||++||.+|.++++|++|+|.+++|.|||+++
T Consensus         1 I~~f~~~v~v~~s~~~pk~i~~~gsdG~~y~fl~K~~dDlR~D~r~~ql~~~~n~il~~~~~~~~~~l~~~ty~Vipls~   80 (280)
T cd05169           1 ISSFDPVLKVIPSKQRPRRLTIVGSDGKEYKFLLKGHEDLRLDERVMQLFGLINTLLKNDSETSKRNLSIQTYSVIPLSP   80 (280)
T ss_pred             CccccCeEEEEeCCCCCeEEEEECCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHhChhhhhcCcceeeccEEecCC
Confidence            6799999999999999999999997                      999999999999999999999999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+|++||.+|++.|+.+.++..                 ..+...+..+..+           .........|
T Consensus        81 ~~GlIE~v~~~~sl~~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~~-----------~~~~~~~~~k  132 (280)
T cd05169          81 NVGLIGWVPGCDTLHSLIREYRKKRNIPL-----------------NLEHRLMELKSAP-----------DYDNLTLIQK  132 (280)
T ss_pred             CcceEEeCCCCchHHHHHHHHHHHcCCCh-----------------hHHHHHHHHHhhh-----------hhhhCCHHHH
Confidence            99999999999999999999987542110                 0000111000000           0112344678


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                      .++|+++++++|+++|++++|..++++..|+.+|++|++|+|+|||+|||||||||||+|||||+.||+|+|||||++|+
T Consensus       133 ~~~~~~i~~~~~~~~l~~~~~~~~~~~~~w~~~r~~F~~S~A~~Sv~~YilglgDRH~~NIll~~~tG~v~HIDfg~~f~  212 (280)
T cd05169         133 LEVFEYALNNTPGDDLRKILWLKSPSSEAWLERRTNFTRSLAVMSMVGYILGLGDRHPSNIMIDRLTGKVIHIDFGDCFE  212 (280)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhheeccCCCcceEEEEcCCCCEEEEecHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC-CCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcccc
Q 037207          450 KGQ-RLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT  515 (1989)
Q Consensus       450 kGk-rL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~  515 (1989)
                      +|+ .+++||.|||||||||+++||+.|++|.|+.+|+.++++||+|++.|+++|++|+||||++|.
T Consensus       213 ~~~~~~~~pE~VPFRLT~~~~~~lG~~g~~G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~dpl~~W~  279 (280)
T cd05169         213 VAMHREKFPEKVPFRLTRMLVNALGVSGIEGTFRTTCEDVMNVLRENKESLMAVLEAFVHDPLLSWR  279 (280)
T ss_pred             hccccCCCCCcCCcccCHHHHHHhCCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHHhCcccccc
Confidence            996 468999999999999999999999999999999999999999999999999999999999996

TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with

>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2e-59  Score=538.76  Aligned_cols=256  Identities=37%  Similarity=0.614  Sum_probs=230.3

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      |.+|.|.|.|++||++||||+|+|+                      |||++||++|.++++|++|+|.+++|.|||||+
T Consensus         1 ~~~f~~~v~v~~s~~~Pkri~~~gsdG~~y~fl~K~~dDlR~D~rimQl~~~~n~il~~~~e~~~r~l~i~~y~vipls~   80 (279)
T cd05171           1 VSKFKDVFTTAGGINAPKIITCVGSDGKKYKQLLKGGDDDRQDAVMEQVFQLVNTLLERNKETRKRKLRIRTYKVVPLSP   80 (279)
T ss_pred             CCCccCeEEEecCCCCCEEEEEECCCCCEEEEEecCCCcccHHHHHHHHHHHHHHHHhhChhhhhcCceeecceEEecCC
Confidence            5689999999999999999999998                      999999999999999999999999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+|++||++||+.++...+                   ...|.+....+....+++.        ...+.+.+
T Consensus        81 ~~GLIe~v~~~~tl~~i~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~--------~~~~~~~r  133 (279)
T cd05171          81 RAGILEWVDGTIPLGEYLVGATGAHE-------------------RYRPGDWTARKCRKAMAEV--------QKESNEER  133 (279)
T ss_pred             CceEEEECCCChhHHHHHHHhhhccc-------------------ccCccchhHHHHHHHHHHh--------hcCCHHHH
Confidence            99999999999999999998752110                   0123333333333333221        12356789


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                      +++|+++++++++ +|++|||..++++++||.+|++|++|+|+|||+|||||||||||+||||++.||+|+|||||++|+
T Consensus       134 ~~~f~~i~~~~~p-~l~~~f~~~~~~~~~~~~~r~~F~~S~A~~s~~~yilglgDRh~~NIll~~~tG~v~hiDf~~~f~  212 (279)
T cd05171         134 LKVFLKICKNFRP-VFRYFFLEKFLDPQDWFERRLAYTRSVATSSIVGYILGLGDRHANNILIDEKTAEVVHIDLGIAFE  212 (279)
T ss_pred             HHHHHHHHHhCcH-HHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCcCcEEEEechhhhc
Confidence            9999999999776 799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcccc
Q 037207          450 KGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT  515 (1989)
Q Consensus       450 kGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~  515 (1989)
                      +|+.+++||.|||||||||+++||+.|++|.|+.+|++++++||++++.|+++|++|+||||++|.
T Consensus       213 ~~~~l~~pe~vPFRLT~~~~~~lg~~g~~g~f~~~~~~~~~~Lr~~~~~l~~~l~~fv~dpl~~W~  278 (279)
T cd05171         213 QGKILPVPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTLEVLRDNKDAILTILEVLLYDPLYSWT  278 (279)
T ss_pred             cCcCCCCCCcCChhhhHHHHHHhCCCCCcchHHHHHHHHHHHHHcChHHHHHHHHHHHhCcccccc
Confidence            997799999999999999999999999999999999999999999999999999999999999997

ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi

>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=4e-59  Score=529.91  Aligned_cols=226  Identities=26%  Similarity=0.426  Sum_probs=215.1

Q ss_pred             EEEEeceeEEe-cCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCccceecceeeE
Q 037207          232 IASFSEEVSIL-STKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTP  286 (1989)
Q Consensus       232 I~rF~p~V~VL-~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIP  286 (1989)
                      |++|.|+|+|+ .++++||||+|+|+                        |||++||++|.++++|++|+|.+++|.|||
T Consensus         1 i~rf~p~~~iv~~~~~~pkri~i~gsdG~~y~fLvk~~~~~d~R~d~Ri~Ql~~liN~~l~~~~et~~r~l~i~~y~viP   80 (253)
T cd05163           1 IERFLPTVEIVRGHGYCYRRLTIRGHDGSIYPFLVQYPAARQARREERVLQLFRTLNSVLSKNKETRRRNLQFTLPLVVP   80 (253)
T ss_pred             CcccCCeEEEEccCCCcCcEEEEECCCCCEEEEEEecCCchhHHHHHHHHHHHHHHHHHHhcCHHHHhCcccccceeEEE
Confidence            57999999987 68899999999998                        999999999999999999999999999999


Q ss_pred             ecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCCh
Q 037207          287 ISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPH  366 (1989)
Q Consensus       287 LSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~  366 (1989)
                      |++++|||||++++.||+++|+.                                                         
T Consensus        81 Ls~~~gLie~~~~~~tl~~i~~~---------------------------------------------------------  103 (253)
T cd05163          81 LSPQIRLVEDDPSYISLQEIYED---------------------------------------------------------  103 (253)
T ss_pred             cCCccceEEECCCCccHHHHHHH---------------------------------------------------------
Confidence            99999999999999999988742                                                         


Q ss_pred             HHHHHHHHHHHhc-cchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecc
Q 037207          367 DVKRKVLLDLMKE-VPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYN  445 (1989)
Q Consensus       367 evkreVF~eL~ke-tP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG  445 (1989)
                        |+++|.+++++ +|+++|++|+|..++++++||.+|++||+|+|+|||+|||||||||||+||||+..||+|+|||||
T Consensus       104 --~~~~~~~i~~~~~p~~~l~~~~~~~~~~~~~~~~~r~~ft~s~A~~s~~gYilglgdRh~~nili~~~tG~v~hiDf~  181 (253)
T cd05163         104 --KLEIYNEIQKDMVPDTILKNYILSTFPTYQDYWLFRKQFTYQLALLSFMTYILSINNRNPDKIFISRDTGNVYQSDLL  181 (253)
T ss_pred             --HHHHHHHHHHhcCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhEEEEcCCCcEEEEeee
Confidence              34567788887 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC-CcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          446 VCFDKGQR-LKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       446 ~cFekGkr-L~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      ++|++|+. +++||.|||||||||+++||++|+||.|+.+|+++++|||++++.|+++|++|+||||++|.+
T Consensus       182 ~~f~~~~~~~~~pE~VPFRLT~ni~~~~g~~g~eG~f~~~~~~~~~~Lr~~~~~l~~~L~~fi~Dpl~~W~~  253 (253)
T cd05163         182 PSINNNKPLFHNNEPVPFRLTPNIQHLIGPIGLEGILTSSMMAIARCLTEPEFDLENALQLFIRDELIAWHK  253 (253)
T ss_pred             eeecCCCcCCCCCCcCCcccCHHHHHHhCCcCcCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHcChhhhhcC
Confidence            99999965 489999999999999999999999999999999999999999999999999999999999973

TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat

>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=5.5e-56  Score=499.59  Aligned_cols=212  Identities=34%  Similarity=0.628  Sum_probs=202.4

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      |.+|.++|.|++||++||||+|+|+                      |||++||.+|.++++|++|++.+++|.|||+++
T Consensus         1 i~~~~~~v~v~~S~~~Pkri~~~~~dG~~~~fl~K~~dDlR~D~r~~Ql~~l~n~~l~~~~~~~~~~l~~~~y~vipls~   80 (235)
T cd05172           1 IVGFDERVLVLSSLRKPKRITIRGSDEKEYPFLVKGGEDLRQDQRIQQLFGVMNNILAQDTACRQRALQLRTYQVIPMTP   80 (235)
T ss_pred             CCCcCCceEEeccCCCCEEEEEECCCCCEEEEEEECCCcccHHHHHHHHHHHHHHHHHhChhhccCCceeecceEEEeCC
Confidence            6789999999999999999999997                      999999999999999999999999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+++.||++|+++                                                            
T Consensus        81 ~~GlIE~v~~~~sl~~i~~~------------------------------------------------------------  100 (235)
T cd05172          81 RFGLIEWLENTTPLKEILKN------------------------------------------------------------  100 (235)
T ss_pred             CCceEEEcCCchhHHHHHhh------------------------------------------------------------
Confidence            99999999999999988742                                                            


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                                   +.|++++|..++++++||.+|++|++|+|+||++|||||||||||+||||++.||+|+|||||++|+
T Consensus       101 -------------~~l~~~~~~~~~~~~~~~~~r~~F~~S~A~~S~~~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~  167 (235)
T cd05172         101 -------------DLLRRALVEMSASPEAFLSLRDHFAKSLAAMCVSHWILGIGDRHLSNFLVDLETGGLVGIDFGHAFG  167 (235)
T ss_pred             -------------HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHhheeeccCCCcccEEEECCCCcEEEEeeHhhhc
Confidence                         2356678888899999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC-CCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          450 KGQ-RLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       450 kGk-rL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      +++ .+++||+|||||||||+++||+.|++|.|+.+|+.++++||+|++.|+++|++|+|||+++|..
T Consensus       168 ~~~~~~~~pE~vPFRLT~~~~~~~g~~g~~G~f~~~~~~~~~~Lr~~~~~l~~~l~~f~~dpl~~w~~  235 (235)
T cd05172         168 TATQFLPIPELMPFRLTPQFVNLMEPMKADGLLRSCMVHTLRALRNERHLLLSTMDVFVKEPSLDWKN  235 (235)
T ss_pred             cCCccCCCCCCCCeeeCHHHHHHhCCCCCCChHHHHHHHHHHHHHcCHHHHHHHHHHHhhCchhhhcC
Confidence            996 5999999999999999999999999999999999999999999999999999999999999973

DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st

>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=4.5e-54  Score=484.64  Aligned_cols=215  Identities=43%  Similarity=0.772  Sum_probs=204.1

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      |.+|.+.|.|++|+++||+|+|+|+                      |||+++|.+|.++++|+++++.+++|.|||+++
T Consensus         1 i~~~~~~~~v~~s~~~P~~i~~~~~dG~~~~~l~K~~dDLRqD~ri~ql~~l~n~il~~~~~~~~~~l~~~~y~Vipl~~   80 (237)
T cd00892           1 ISGFEDEVEILNSLQKPKKITLIGSDGNSYPFLCKPKDDLRKDARLMEFNTLINRLLSKDPESRRRRLYIRTYAVIPLNE   80 (237)
T ss_pred             CccccCeEEEEeccCCceEEEEEcCCCCEEEEEEeCCCcccHHHHHHHHHHHHHHHHHhCchhccCceeeEeceEEEcCC
Confidence            6789999999999999999999997                      999999999999999999999999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+|++||++|+++++                                                          
T Consensus        81 ~~GlIE~v~~~~sl~~i~~~~~----------------------------------------------------------  102 (237)
T cd00892          81 ECGIIEWVPNTATLRSILLEIY----------------------------------------------------------  102 (237)
T ss_pred             CCceEEECCCCccHHHHHHHhC----------------------------------------------------------
Confidence            9999999999999999987542                                                          


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                                  +..|++|++..+++++.|+.+|++|+.|+|+||++|||||||||||+||||++.||+++|||||++|+
T Consensus       103 ------------~~~l~~~~~~~~~~~~~~~~~~~~F~~SlA~~s~~~YilgigDRh~~NIli~~~tG~~~HIDfg~~~~  170 (237)
T cd00892         103 ------------PPVFHEWFLENFPDPSAWLKARNAYTRSTAVMSMVGYILGLGDRHGENILFDSNTGDVVHVDFNCLFD  170 (237)
T ss_pred             ------------CHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccEEEEcCCCcEEEEehHhhhc
Confidence                        01345677778889999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          450 KGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       450 kGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      +|+.+++||+|||||||||+++||+.|++|.|+.+|+.++++||+|++.|+++|++|+||||++|.+
T Consensus       171 ~~~~~~~pe~vPFRLT~~~~~~lg~~g~~g~F~~~~~~~~~~Lr~~~~~l~~~l~~fi~dpl~~w~~  237 (237)
T cd00892         171 KGETLEVPERVPFRLTQNMVDAMGVLGVEGLFRKSCEVTLRLLRSNKETLMSVLETFIHDPLVEWSK  237 (237)
T ss_pred             ccccCCCCCCCCcccCHHHHHHhCCCCCCCchHHHHHHHHHHHHhCHHHHHHHHHHHhhccchhccC
Confidence            9988999999999999999999999999999999999999999999999999999999999999974

ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central

>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=7.4e-51  Score=454.70  Aligned_cols=200  Identities=47%  Similarity=0.836  Sum_probs=191.2

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      |.+|++.|.|++||++||||+|+|+                      |+|+++|.+|.++++|+++++.+++|.|+|+++
T Consensus         1 i~~~~~~v~v~~S~~~P~~i~~~~~dG~~~~fl~K~~dDlR~D~rv~ql~~~~n~il~~~~~~~~~~l~~~~y~vipls~   80 (222)
T cd05164           1 IASFDDAVRILGSKQKPKKITLTGSDGKKYLFLVKGGEDLRQDQRIMQLFQFCNTLLAKDAECRRRKLTIRTYAVIPLNS   80 (222)
T ss_pred             CccccCeeEEecccCCCEEEEEECCCCCEEEEEEeCCCcccHHHHHHHHHHHHHHHHHhCchhccCceEeecceEEEcCC
Confidence            6789999999999999999999997                      999999999999999999999999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+|+.||+++                                                               
T Consensus        81 ~~GliE~v~~~~sl~~~---------------------------------------------------------------   97 (222)
T cd05164          81 RSGLIEWVEGTTTLKPV---------------------------------------------------------------   97 (222)
T ss_pred             CCceEEEcCCcchHHHH---------------------------------------------------------------
Confidence            99999999999997633                                                               


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                                     |++++|..++++++||.+|++|+.|+|++|++|||||||||||+||||++.||+++|||||++|+
T Consensus        98 ---------------l~~~~~~~~~~~~~~~~~r~~F~~SlA~~s~~~YvlglgDRh~~NIli~~~tG~v~hIDf~~~~~  162 (222)
T cd05164          98 ---------------LKKWFWLQFPDPEQWFAARKNYTRSTAVMSIVGYILGLGDRHLDNILIDRETGEVVHIDFGCIFE  162 (222)
T ss_pred             ---------------HHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCceEEEECCCCcEEEEccHHhhc
Confidence                           34456777888999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhC
Q 037207          450 KGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWD  509 (1989)
Q Consensus       450 kGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrD  509 (1989)
                      +++.+++||.|||||||||+++||+.|++|.|+.+|+++++|||+|++.|+++|++|+||
T Consensus       163 ~~~~~~~~e~vPFRLT~~~~~~lg~~g~~G~f~~~~~~~~~~Lr~~~~~l~s~l~~fv~d  222 (222)
T cd05164         163 KGKTLPVPELVPFRLTRNIINGMGITGVEGLFRKICEQTLEVFRKHRDTLIAFLEVFVYD  222 (222)
T ss_pred             cCCCCCCCCCCCEEeCHHHHHHhCCCCcCChHHHHHHHHHHHHHhCHHHHHHHHHHHhcC
Confidence            998889999999999999999999999999999999999999999999999999999998

Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d

>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2.6e-46  Score=416.92  Aligned_cols=197  Identities=35%  Similarity=0.568  Sum_probs=185.4

Q ss_pred             EEEEeceeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecceeeEecC
Q 037207          232 IASFSEEVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISG  289 (1989)
Q Consensus       232 I~rF~p~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp  289 (1989)
                      +.+|.+.+.|++|+++||+|.|+|+                      |+++++|.+|.+++   ++++.+++|.|||+++
T Consensus         1 ~~~~~~~~~v~~s~~~P~~l~~~~~dg~~~~~l~K~~ddlR~D~~~~ql~~~~n~il~~~~---~~~l~~~~y~vipls~   77 (219)
T cd00142           1 IAIDVKICRIMPSKTRPKKLTLIGADGKEYRILFKNGDDLRQDERVLQFIRLMNKILKKEL---GLDLFLTTYSVIPLSP   77 (219)
T ss_pred             CCccCCceEEEcccCCCEEEEEEccCCCEEEEEEeCCCchhHHHHHHHHHHHHHHHHHhCC---CCCceEEeEEEEEecC
Confidence            3578899999999999999999997                      99999999999876   7899999999999999


Q ss_pred             CcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHH
Q 037207          290 RAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVK  369 (1989)
Q Consensus       290 ~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evk  369 (1989)
                      ++||||||+++.|++                                                                 
T Consensus        78 ~~GlIE~v~~~~sl~-----------------------------------------------------------------   92 (219)
T cd00142          78 RSGLIEVVPGSVTLE-----------------------------------------------------------------   92 (219)
T ss_pred             CceEEEEeCCCchhH-----------------------------------------------------------------
Confidence            999999999999875                                                                 


Q ss_pred             HHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccc
Q 037207          370 RKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFD  449 (1989)
Q Consensus       370 reVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFe  449 (1989)
                                   +.|++|+|..++++++||.+|++|+.|+|++|++|||||||||||+||||++.||+++|||||++|+
T Consensus        93 -------------~~l~~~~~~~~~~~~~~~~~~~~F~~SlA~~s~~~YilglgDRh~~NIli~~~~G~~~hIDfg~~~~  159 (219)
T cd00142          93 -------------DDLSKWLKRKSPDEDEWQEARENFISSLAGYSVAGYILGIGDRHPDNIMIDLDTGKLFHIDFGFIFG  159 (219)
T ss_pred             -------------HHHHHHHHHHCcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccEEEECCCCeEEEEeeHHhhC
Confidence                         1345567777888899999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhChhHHHHHHHHHhhC
Q 037207          450 KGQRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWD  509 (1989)
Q Consensus       450 kGkrL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRknkd~LlsLLEaFVrD  509 (1989)
                      +++.+..||+|||||||||+++||+.|++|.|+..|+.++++||+|++.|+++|++|++|
T Consensus       160 ~~~~~~~~e~vPFRLT~~~~~~~g~~~~~g~F~~~~~~~~~~lr~~~~~i~~ll~~~~~~  219 (219)
T cd00142         160 KRKKFLGRERVPFRLTPDLVNALGTGGVFGPFRSLCVKAMLILRRHAGLLLNLLSLMLRD  219 (219)
T ss_pred             cCcCCCCCCCCCEeccHHHHHHhCCcchhhhHHHHHHHHHHHHHhChHHHHHHHHHhccC
Confidence            998777799999999999999999999999999999999999999999999999999987

Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the

>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain

Probab=100.00  E-value=4.4e-45  Score=402.47  Aligned_cols=182  Identities=35%  Similarity=0.588  Sum_probs=170.0

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      |+|+++|.+|.++++++++++.+++|.|+|+++++||||||+|+.|+++|+.                            
T Consensus        18 ql~~~~n~il~~~~e~~~~~l~~~~y~vip~~~~~GlIE~v~~~~sl~~il~----------------------------   69 (202)
T smart00146       18 QLLRLMNKILQKDGETRRRDLHLRPYKVIPTGPKSGLIEVVPNSTTLHQILY----------------------------   69 (202)
T ss_pred             HHHHHHHHHHHhCcccccCceEeeeeEEEEcCCCcceEEEcCCchhHHHHHH----------------------------
Confidence            9999999999999999999999999999999999999999999999877633                            


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMV  416 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmV  416 (1989)
                                                                        +|+|..++++..||.+|++|++|+|+||++
T Consensus        70 --------------------------------------------------~~~~~~~~~~~~~~~~~~~F~~SlA~~s~~   99 (202)
T smart00146       70 --------------------------------------------------DWFKKKFPDPEDYFEARKNFTRSCAGYSVI   99 (202)
T ss_pred             --------------------------------------------------HHHHHHCcCHHHHHHHHHHHHHHHHHHHHH
Confidence                                                              334445566778999999999999999999


Q ss_pred             HhhcccCCCCCCceEEecCCCcEEEEecccccccCCCCcCC-CcCCccccHHHHHHhccCCccchHHHHHHHHHHHHhhC
Q 037207          417 GHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVP-EIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKN  495 (1989)
Q Consensus       417 GYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL~vP-E~VPFRLTrNIv~ALGptGVEG~FRssceatmr~LRkn  495 (1989)
                      |||||||||||+||||+ +||+|+|||||++|++++.+..| |.|||||||||+++||+.|++|.|+..|+.++++||++
T Consensus       100 ~YilglgDRh~~NIli~-~~G~v~hIDfg~~~~~~~~~~~~~e~vPFRLT~~~~~~lg~~~~~g~F~~~~~~~~~~Lr~~  178 (202)
T smart00146      100 TYILGLGDRHNDNIMLD-KTGHLFHIDFGFILGNGPKLFGFPERVPFRLTPEMVDVMGDSGYFGLFRSLCERALRALRKN  178 (202)
T ss_pred             HHHhcCCCCCCCcEEEe-CCCCEEEEechhhhCccccCCCCCCCCCeecCHHHHHHhCCCcccchHHHHHHHHHHHHHcC
Confidence            99999999999999999 89999999999999999765555 99999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhCCCcccccc
Q 037207          496 KDILLMLLEVFVWDPLIEWTRG  517 (1989)
Q Consensus       496 kd~LlsLLEaFVrDPLvdW~~~  517 (1989)
                      ++.|+++|++|++||+.+|+..
T Consensus       179 ~~~i~~~l~~~~~d~l~~~~~~  200 (202)
T smart00146      179 SNLIMSLLELMLYDGLPDWRSG  200 (202)
T ss_pred             HHHHHHHHHHHcCCCChhhcCC
Confidence            9999999999999999999864

Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.

>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=100.00  E-value=5.4e-44  Score=398.35  Aligned_cols=212  Identities=40%  Similarity=0.728  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      |+|+++|.+|.+++++++    +++|.|+|+++++||||||+++.||.+|++.++.+.+..               .  .
T Consensus        20 ql~~~~n~~l~~~~~~~~----~~~Y~vipls~~~Glie~v~~~~tl~~i~~~~~~~~~~~---------------~--~   78 (235)
T PF00454_consen   20 QLFRLMNRILKKEGETRE----IRTYRVIPLSPNCGLIEWVPNTITLQEIYKTYCVRIGHS---------------N--D   78 (235)
T ss_dssp             HHHHHHHHHHHHTT-------------EEEEETTEEEEE--TTEEEHHHHHHHSTTSSTTT---------------C--S
T ss_pred             HHHHHHHHHHhcCCCCce----EEEeEEEecCCCCceeEEeccccchhHhhcccccccccc---------------c--c
Confidence            999999999999987765    999999999999999999999999999999987643110               0  0


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMV  416 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmV  416 (1989)
                      .+...+                     |..     .+....+.+|++.++++|+..++++++||.+|++|++|+|.+|++
T Consensus        79 ~~~~~~---------------------~~~-----~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~r~~f~~sla~~si~  132 (235)
T PF00454_consen   79 NPSRKY---------------------KAK-----LFEKQSSKVPKDGLRQYFLKSFPSAEEWFEARKNFTRSLAAYSIL  132 (235)
T ss_dssp             C--------------------------------------------TTHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccc---------------------ccc-----cccccccccccchHHHHHHhcCCChhhhHhhhHhhHHHHHHHhhc
Confidence            000000                     000     033445668899999999999999999999999999999999999


Q ss_pred             HhhcccCCCCCCceEEecCCCcEEEEecccccccCCCCcCCCcCCccccHHHHHHh----ccCCccchHHHHHHHHHHHH
Q 037207          417 GHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAAL----GLTGIEGTFRANCEAVVSVL  492 (1989)
Q Consensus       417 GYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL~vPE~VPFRLTrNIv~AL----GptGVEG~FRssceatmr~L  492 (1989)
                      +||||+|||||+||||+..||+|+|||||+||+ ++.+++||.|||||||||+++|    |+.|++|.|+.+|+.++++|
T Consensus       133 ~yilg~gDRh~~Nili~~~~g~~~hIDfg~~f~-~~~~~~~e~vPFrLT~~~~~~~~~~l~~~~~~g~f~~~~~~~~~~l  211 (235)
T PF00454_consen  133 DYILGLGDRHPGNILIDKKTGELIHIDFGFIFG-GKHLPVPETVPFRLTRNMVNAMGGYLGPSGVEGLFRSSCEAILRAL  211 (235)
T ss_dssp             HHHHT-CS--TTTEEE-ETTSEEEE--HSSCTT-HHHGSSSS--SSTTHHHHHHHTTTSSSTSHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeecCCCchhheeccccceeeeEEeHHhhh-ccccCCCCCCCeEeCHHHHHHHhccCCCchhHhHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999 8788999999999999999999    99999999999999999999


Q ss_pred             hhChhHHHHHHHHHhhCCCccccc
Q 037207          493 RKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       493 Rknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      |+|++.|+++|++|++||+++|++
T Consensus       212 r~~~~~l~~ll~~~~~d~l~~w~~  235 (235)
T PF00454_consen  212 RRNKDLLLSLLELFLRDPLIDWRK  235 (235)
T ss_dssp             HHTHHHHHHHHHHTTTSCSTTSS-
T ss_pred             hcChHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999974

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....

>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=7.3e-43  Score=412.35  Aligned_cols=222  Identities=22%  Similarity=0.353  Sum_probs=193.7

Q ss_pred             CCCcEEEEEEec-eeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCcccee
Q 037207          226 LRGIVTIASFSE-EVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIR  280 (1989)
Q Consensus       226 ~~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~Ir  280 (1989)
                      ..+.++|.+|.+ .+.|++|+++|++|+|.|+                        |++++||.+|.++    ..+|.++
T Consensus        53 ~~p~~~i~~i~~~~~~v~~S~~~P~~l~f~~~d~~g~~~~~i~K~gDDLRqD~l~~Ql~~l~~~i~~~~----~ldl~l~  128 (352)
T cd00891          53 LDPRLEIKGLIIEKCKVMDSKKKPLWLVFKNADPSGEPIKVIFKVGDDLRQDMLTLQMIRLMDKIWKKE----GLDLRMT  128 (352)
T ss_pred             CCCceEEEEEeccceEEeccccCCcEEEEEecCCCCCEEEEEeccCCchhHHHHHHHHHHHHHHHHHHC----CCCeeeE
Confidence            345689999985 6999999999999999975                        9999999999876    3689999


Q ss_pred             cceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccccccc
Q 037207          281 YYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVIS  360 (1989)
Q Consensus       281 tYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~s  360 (1989)
                      +|.|+|+++++||||||+|+.|+++|.+++....               +          .|                  
T Consensus       129 ~Y~Vip~~~~~GlIE~V~ns~tl~~I~~~~~~~~---------------~----------~~------------------  165 (352)
T cd00891         129 PYGCIATGDGVGMIEVVPNSETIAKIQKKAGGVG---------------G----------AF------------------  165 (352)
T ss_pred             EEEEEEccCCceEEEEeCCCccHHHHHHhcCccc---------------c----------cc------------------
Confidence            9999999999999999999999999987542100               0          00                  


Q ss_pred             CCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEE
Q 037207          361 RRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV  440 (1989)
Q Consensus       361 R~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVV  440 (1989)
                                          ....|++|+....+++..|...|.+|++|+|+|||+||||||||||++||||| .+|+++
T Consensus       166 --------------------~~~~l~~~~~~~~~~~~~~~~a~~nF~~S~A~ysv~~YiLgigDRH~~NILi~-~~G~~~  224 (352)
T cd00891         166 --------------------KDNPLMNWLKKKNKGEEDYEKAVENFTYSCAGYCVATYVLGIGDRHNDNIMLT-KTGHLF  224 (352)
T ss_pred             --------------------ccchHHHHHHHhCCCHHHHHHHHHHHhhhHHHHHHHHHHccccccCCCceEEC-CCCCEE
Confidence                                00124556666667778899999999999999999999999999999999999 699999


Q ss_pred             EEecccccccCC-CCc-CCCcCCccccHHHHHHhccCCcc--chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcccc
Q 037207          441 HIDYNVCFDKGQ-RLK-VPEIVPFRLTQTIEAALGLTGIE--GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT  515 (1989)
Q Consensus       441 HIDFG~cFekGk-rL~-vPE~VPFRLTrNIv~ALGptGVE--G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~  515 (1989)
                      |||||++|+.++ .+. .||.||||||++|+++||+.|.+  |.|+..|+.++.+||+|.+.|++++++|+++++-+|.
T Consensus       225 HIDFG~ilg~~~~~~~~~~E~~PFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~LR~~~~~il~l~~lm~~~~lp~~~  303 (352)
T cd00891         225 HIDFGHFLGNFKKKFGIKRERAPFVLTPDMAYVMGGGDSEKFQRFEDLCCKAYNILRKHGNLFINLFSLMLSAGIPELQ  303 (352)
T ss_pred             EEehHHhhccCCccCCCCCCCCCeeecHHHHHHhCCCCCcccchHHHHHHHHHHHHhcCHHHHHHHHHhhccCCCCccC
Confidence            999999999763 333 69999999999999999999876  9999999999999999999999999999999998886

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c

>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=1e-42  Score=410.86  Aligned_cols=220  Identities=17%  Similarity=0.282  Sum_probs=190.6

Q ss_pred             CcEEEEEEe-ceeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCccceecc
Q 037207          228 GIVTIASFS-EEVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIRYY  282 (1989)
Q Consensus       228 ~~VrI~rF~-p~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~IrtY  282 (1989)
                      +.++|.++. +.+.|++|+++|++|+|.|+                        |++++||.+|+++    ..+|.+++|
T Consensus        55 p~~~~~~i~~~~~~v~~S~~~P~~l~f~~~d~~g~~~~~i~K~gDDLRQD~l~~Qli~lm~~i~~~~----~ldL~l~~Y  130 (353)
T cd05166          55 PALDVKGIDVRECSYFNSNALPLKISFVNADPMGENISVIFKAGDDLRQDMLVLQMINIMDKIWLQE----GLDLRMITF  130 (353)
T ss_pred             CceEEEeEEcCceEEeccccCceEEEEEecCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHHHHHhC----CCCceeEEE
Confidence            346788887 68999999999999999975                        9999999999876    468999999


Q ss_pred             eeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCC
Q 037207          283 SVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRR  362 (1989)
Q Consensus       283 sVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~  362 (1989)
                      .|+|+|+++||||||+|+.|+.+|.+++..              .  +          . +                   
T Consensus       131 ~vip~~~~~GlIE~V~ns~tl~~I~~~~g~--------------~--~----------~-~-------------------  164 (353)
T cd05166         131 RCLSTGYDRGMVELVPDAETLRKIQVEEGL--------------T--G----------S-F-------------------  164 (353)
T ss_pred             EEEEcCCCcceEEEeCCchhHHHHHHHhCc--------------c--c----------c-c-------------------
Confidence            999999999999999999999998754210              0  0          0 0                   


Q ss_pred             CCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEE
Q 037207          363 DWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHI  442 (1989)
Q Consensus       363 dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHI  442 (1989)
                                        ....+++|++...+++..|...|.+|++|+|+|||+||||||||||++||||+ .+|+++||
T Consensus       165 ------------------~~~~l~~~l~~~~~~~~~~~~a~~nF~~S~A~ysvv~YiLgigDRH~~NILl~-~~G~l~HI  225 (353)
T cd05166         165 ------------------KDRPIAKWLMKHNPSELEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLT-KSGHMFHI  225 (353)
T ss_pred             ------------------cchhHHHHHHHhCCChHHHHHHHHHHHhHHHHHHHHHHHhhccccCCCceEEC-CCCCEEEE
Confidence                              01135667777778888999999999999999999999999999999999999 79999999


Q ss_pred             ecccccccCCCC--cCCCcCCccccHHHHHHhccCC----ccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          443 DYNVCFDKGQRL--KVPEIVPFRLTQTIEAALGLTG----IEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       443 DFG~cFekGkrL--~vPE~VPFRLTrNIv~ALGptG----VEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      |||++|++++..  -.||+||||||++|+++||..|    ..|.|+..|+.++.+||+|.+.|++++++|+++++.+|..
T Consensus       226 DFG~~lg~~~~~~~~~~E~~PFrLT~emv~~~ggg~~~s~~~~~F~~~c~~~~~~lRk~~~~il~ll~~ml~s~lp~~~~  305 (353)
T cd05166         226 DFGKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFVDLCCRAYNIIRKHANLLLNLLRMMACSGLPELSK  305 (353)
T ss_pred             eeHHhcccccccccCCCCCCCccccHHHHHHhcCCCCCcchHhHHHHHHHHHHHHHHcChHHHHHHHHHHhcCCCcccCc
Confidence            999999987432  2489999999999999998653    3579999999999999999999999999999999999973

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any

>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=1e-41  Score=402.20  Aligned_cols=210  Identities=23%  Similarity=0.432  Sum_probs=181.9

Q ss_pred             CCCcEEEEEEec-eeEEecCCCCceEEEEEcH-------------------------HHHHHHHHHHhcCCccCCCccce
Q 037207          226 LRGIVTIASFSE-EVSILSTKTKPKKLVILGQ-------------------------MLLQAVNSFLRSSPATRSHSLGI  279 (1989)
Q Consensus       226 ~~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS-------------------------QLFrLINsLL~kdkETRRR~L~I  279 (1989)
                      .++.++|.++.+ .+.|++|+++|++|+|.|+                         |++++||.+|.++    .++|.+
T Consensus        57 ~dp~~~i~~i~~~~~~v~~S~~~P~~l~f~~~dg~~~~~~~~i~K~gDDLRqD~l~~Ql~~lm~~il~~~----~ldl~l  132 (350)
T cd00896          57 LDPSIEITGIIPEESSVFKSALMPLKLTFKTEKGNEEGEYPVIFKVGDDLRQDQLVIQIISLMDRLLKKE----NLDLKL  132 (350)
T ss_pred             CCCCeEEEEEecCceEEeccccCceEEEEEeCCCCCCceEEEEecCCcchhHhHHHHHHHHHHHHHHHhC----CCCcee
Confidence            345688888875 7999999999999999864                         9999999999986    378999


Q ss_pred             ecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccc
Q 037207          280 RYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVI  359 (1989)
Q Consensus       280 rtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~  359 (1989)
                      ++|.|||+++++||||||+ +.|+.+|.+++..   +.+                       |+                
T Consensus       133 ~~Y~Vip~~~~~GlIE~V~-s~tl~~i~~~~~~---l~~-----------------------~l----------------  169 (350)
T cd00896         133 TPYKVLATSPTDGLVEFIP-SVTLASILKKYGG---ILN-----------------------YL----------------  169 (350)
T ss_pred             EEEEEEEcCCCCcceEEEe-cccHHHHHHHHHH---HHH-----------------------HH----------------
Confidence            9999999999999999999 9999999887532   100                       00                


Q ss_pred             cCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChh----HHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecC
Q 037207          360 SRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFK----AFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFS  435 (1989)
Q Consensus       360 sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse----~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~  435 (1989)
                                                    +...++..    .|...+.+|++|+|+|||+||||||||||++||||+ .
T Consensus       170 ------------------------------~~~~~~~~~~~~~~~~a~~nF~~S~A~ysvv~YiLGigDRH~~NILi~-~  218 (350)
T cd00896         170 ------------------------------RKLNPDDGGPLGISPEVMDTFVKSCAGYCVITYILGVGDRHLDNLLLT-K  218 (350)
T ss_pred             ------------------------------HHHCCCccccccchHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEc-C
Confidence                                          00011111    134578999999999999999999999999999999 6


Q ss_pred             CCcEEEEecccccccCCCCcCCCcCCccccHHHHHHhccCCccc--hHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcc
Q 037207          436 SGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEG--TFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE  513 (1989)
Q Consensus       436 TGeVVHIDFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVEG--~FRssceatmr~LRknkd~LlsLLEaFVrDPLvd  513 (1989)
                      +|+++|||||++|++++   .|++||||||++|+++||+.|.+|  .|+..|+.++.+||+|.+.|++++++|+++|+-+
T Consensus       219 ~G~~~HIDFG~ilg~~p---~~~~~PFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~lR~~~~~il~l~~lm~~~~ip~  295 (350)
T cd00896         219 DGKLFHIDFGYILGRDP---KPFPPPMKLCKEMVEAMGGAQSEGYQEFKSYCCEAYNILRKSANLILNLFSLMVDANIPD  295 (350)
T ss_pred             CCCEEEEEhHHhhCCCC---CCCCCCeeccHHHHHHhCCCCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHHHcCCCCcc
Confidence            99999999999999875   378899999999999999999999  9999999999999999999999999999999988


Q ss_pred             ccc
Q 037207          514 WTR  516 (1989)
Q Consensus       514 W~~  516 (1989)
                      |..
T Consensus       296 ~~~  298 (350)
T cd00896         296 IAL  298 (350)
T ss_pred             ccc
Confidence            874

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin

>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2.4e-41  Score=399.54  Aligned_cols=222  Identities=21%  Similarity=0.377  Sum_probs=188.5

Q ss_pred             CCcEEEEEEec-eeEEecCCCCceEEEEEc--------H-------------------HHHHHHHHHHhcCCccCCCccc
Q 037207          227 RGIVTIASFSE-EVSILSTKTKPKKLVILG--------Q-------------------MLLQAVNSFLRSSPATRSHSLG  278 (1989)
Q Consensus       227 ~~~VrI~rF~p-~V~VL~SKqrPRRLtI~G--------S-------------------QLFrLINsLL~kdkETRRR~L~  278 (1989)
                      ++.++|.++.+ .+.|++|+++|++|+|.|        .                   |++++||.+|+++    ..+|+
T Consensus        59 ~P~~~v~~i~~~~~~v~~Sk~~P~~l~f~~~d~~~~~g~~~~~IfK~gDDLRQD~l~lQli~lm~~i~~~~----~ldL~  134 (366)
T cd05165          59 NPSLKLGELRIEKCKVMDSKKKPLWLVFENADPTALSNENVGIIFKNGDDLRQDMLTLQILRIMDSIWKEE----GLDLR  134 (366)
T ss_pred             CCceeEeeeecCceEEehhhcCCcEEEEEccCcccccCCceeEEEecCCcccHHHHHHHHHHHHHHHHHhC----CCCce
Confidence            45688999875 699999999999999985        2                   9999999999886    46899


Q ss_pred             eecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccccc
Q 037207          279 IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRV  358 (1989)
Q Consensus       279 IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v  358 (1989)
                      +++|.|+|+|+++||||||+|+.|+.+|.+.+...                  ..      .. |               
T Consensus       135 l~pY~vl~t~~~~GlIE~V~ns~tl~~I~~~~~~~------------------~~------~~-f---------------  174 (366)
T cd05165         135 MLPYGCLSTGDKIGLIEVVRDSTTIANIQQETGGN------------------AT------AA-F---------------  174 (366)
T ss_pred             eEEEEEEEecCCceEEEEeCCchhHHHHHHhcccc------------------cc------cc-c---------------
Confidence            99999999999999999999999999997643100                  00      00 0               


Q ss_pred             ccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCc
Q 037207          359 ISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGD  438 (1989)
Q Consensus       359 ~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGe  438 (1989)
                                            .+..+.+|+...+++.+.|...+.+|++|+|+||++||||||||||++||||+ .||+
T Consensus       175 ----------------------~~~~l~~wl~~~~~~~~~~~~a~~nF~~S~AgysvvtYiLGigDRH~~NILi~-~~G~  231 (366)
T cd05165         175 ----------------------KKEALLHWLKEKNPTEEKLDAAIEEFTLSCAGYCVATFVLGIGDRHNDNIMVK-ETGQ  231 (366)
T ss_pred             ----------------------CcHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcceEEc-CCCC
Confidence                                  01123444444445567788899999999999999999999999999999999 5999


Q ss_pred             EEEEecccccccCC-CCc-CCCcCCccccHHHHHHhccCCcc------chHHHHHHHHHHHHhhChhHHHHHHHHHhhCC
Q 037207          439 IVHIDYNVCFDKGQ-RLK-VPEIVPFRLTQTIEAALGLTGIE------GTFRANCEAVVSVLRKNKDILLMLLEVFVWDP  510 (1989)
Q Consensus       439 VVHIDFG~cFekGk-rL~-vPE~VPFRLTrNIv~ALGptGVE------G~FRssceatmr~LRknkd~LlsLLEaFVrDP  510 (1989)
                      +||||||++|+.++ .++ .||+||||||++|+++||+.|.+      |.|+..|+.++.+||+|.+.|++++++|+..+
T Consensus       232 l~HIDFG~ilg~~~~~~~i~~E~~PFkLT~emv~~mg~~~~~~~s~~f~~F~~~c~~a~~~LR~~~~~il~l~~lM~~s~  311 (366)
T cd05165         232 LFHIDFGHILGNYKSKFGINRERVPFVLTPDFVHVIGRGKKDNTSEHFQRFQDLCEKAYLALRRHGNLLIILFSMMLMSG  311 (366)
T ss_pred             EEEEehHHhhccCCccCCCCCCCCCeeecHHHHHHhcccCCcCCChhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHhcCC
Confidence            99999999998874 455 49999999999999999998876      99999999999999999999999999999888


Q ss_pred             Ccccc
Q 037207          511 LIEWT  515 (1989)
Q Consensus       511 LvdW~  515 (1989)
                      +-++.
T Consensus       312 ip~~~  316 (366)
T cd05165         312 LPELT  316 (366)
T ss_pred             CcccC
Confidence            87776

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates P

>KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.7e-41  Score=449.30  Aligned_cols=525  Identities=18%  Similarity=0.263  Sum_probs=388.3

Q ss_pred             CccccCCceeEeceeccccccc----------------cCChHHHHHHHHHHHhhchhHHHHHHHHHHHHhhhhhccH-H
Q 037207            1 MLAKLSPWCIVYPTLVDVNAYE----------------ERPSEELQHILGCLRELYPRLIQDVELMINELGNLTVLWE-E   63 (1989)
Q Consensus         1 ~IG~~~PQAVvYPL~V~~~s~~----------------~~~se~a~~Il~~Lr~~hP~LV~ev~l~v~ELiRIavLW~-E   63 (1989)
                      +||+.|||||+||+..++....                +.+...-.+|+..-+..|| +.+.....++++.   ..|+ +
T Consensus      2950 kia~~yPQal~f~lRta~~~~~i~qR~~~~~~~~~~~~~~p~~r~~~i~~~~r~~~p-~~~s~~~~ld~~~---~~w~~~ 3025 (3550)
T KOG0889|consen 2950 KIAKSYPQALYFPLRTAREDLVIEQRQQVEVMGDKSDTTDPMGRPSKISQKQRNLHP-ILSSLEKILDSVQ---LVWERL 3025 (3550)
T ss_pred             HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcHHHHHHHhhccCc-chhhHHhhhccch---hhHHHH
Confidence            4799999999999998764311                1122223467778888899 5666666666333   3366 5


Q ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHHHHHHHHhhc--------CCCCCCh
Q 037207           64 LWLSTL-QDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLAST--------SRKPETP  134 (1989)
Q Consensus        64 ~Wl~~L-~qL~~dv~rRl~~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~~Le~~~a~T--------s~~peTp  134 (1989)
                      .|+..+ .+++..+..++..+-++.....++..  .++.-+    .+.+.+-     .......+        ...++.+
T Consensus      3026 ~~l~~il~~~~~~la~~~~~~~~~i~~~~~~~~--~e~~~r----~v~al~~-----~~~~~~~~r~~ivt~~~~~~~~~ 3094 (3550)
T KOG0889|consen 3026 FDLEEILKTAYQLLAKTLETLFDKIQARFKSTP--EEHALR----LVNALLN-----IDGIQNGNRLGIVTKNTKSLSDT 3094 (3550)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcc--cHHHHH----HHHHHHH-----HhhhccccccccccccccCCcch
Confidence            565543 44556666666666665433222111  111111    1111111     01110010        1111111


Q ss_pred             hHH-----------HHHHHHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHhhhcc--CcccccccChhhhccC-
Q 037207          135 HEI-----------WFHEEFGEQLKSAILNFKTPPASAAALGDVWRPFDNIAASLASHQRK--SSVSLSEVAPQLSLLS-  200 (1989)
Q Consensus       135 hE~-----------~F~k~yg~~L~~Aie~lk~~~~~~~~L~e~W~~fk~I~k~L~~~~kk--ssL~LedISP~La~fs-  200 (1989)
                      .+.           .+.++|..+|..-.+.    .....+++.++++++.|.+.++.+..+  +.+.||+.||+|++|+ 
T Consensus      3095 ~~~l~~~~~~vl~~~~~~~~k~dFi~~~~~----~~~~~~l~~~i~klk~w~~~le~k~~~~pk~~~LE~~s~~L~~F~h 3170 (3550)
T KOG0889|consen 3095 EMNLNRFASNVLPDPVRKKFKEDFITNKDG----MKCICDLENYIDKLRKWRSRLESKVDRFPKKLNLEEKSRFLSNFSH 3170 (3550)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHHHHhcccC----CcccccHHHHHHHHHHHHHHHHHHHhcccccccHHhhchHHhcccc
Confidence            111           1334444444333222    122347888999999999999987643  6789999999999998 


Q ss_pred             -CCCCCCCCcccccccccCCCCccccCCCcEEEEEEeceeEEe-cCCCCceEEEEEcH----------------------
Q 037207          201 -SSDVPMPGFEKQVATSESDGGLTATLRGIVTIASFSEEVSIL-STKTKPKKLVILGQ----------------------  256 (1989)
Q Consensus       201 -~seIeVPGqY~~~~~s~~d~~~t~~~~~~VrI~rF~p~V~VL-~SKqrPRRLtI~GS----------------------  256 (1989)
                       ..+|||||||.-..         +.++++|+|.+|.|+|+++ ++.+..||++|+|+                      
T Consensus      3171 q~~evEiPGqyl~~k---------~~~~~~v~I~RF~P~veiv~~~~~~~rRl~iRG~dGk~~~~~~~~~~~~~sRreEr 3241 (3550)
T KOG0889|consen 3171 QFDEVEIPGQYLLDK---------SNNNYFVKIERFEPRVEIVRGHGMSYRRLYIRGSDGKIYPFAVQYPGLRNSRREER 3241 (3550)
T ss_pred             cCCcccCChHHhccc---------chhhhhhhHHHhccchhhhcccceeEEEEEEeccCCeecceeeecccCCCccHHHH
Confidence             48999999997632         3456899999999999999 56678999999997                      


Q ss_pred             --HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 037207          257 --MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPP  334 (1989)
Q Consensus       257 --QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~  334 (1989)
                        |+++++|..|.+++|++||++.+.++.+||++++++|+|.+|++.||++||+.+|++.++                 .
T Consensus      3242 vlQL~r~lN~~l~~~~Et~rR~l~~~~p~~ipvs~q~rl~ed~ps~~tl~~I~~~~c~~~~~-----------------~ 3304 (3550)
T KOG0889|consen 3242 VLQLFRMLNESLGKNKETRRRHLEFKLPIVIPVSSQMRLVEDKPSSITLQEIYEEYCARNNV-----------------S 3304 (3550)
T ss_pred             HHHHHHHHHHHhccChhhhhhhcCccCceeeeccCceEEecCCcchhhHHHHHHHHHHhcCC-----------------C
Confidence              999999999999999999999999999999999999999999999999999999998632                 2


Q ss_pred             CCCCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhc-cchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhH
Q 037207          335 VPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKE-VPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAM  413 (1989)
Q Consensus       335 vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ke-tP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVm  413 (1989)
                      .+.|...||+++.......      ......+..++.+|+++... +|..++++|+...++++.++|.+|++|+.++|++
T Consensus      3305 ~D~~i~~~~d~l~~~~~~~------~~~~~~~~lr~~i~e~i~~~~vp~sil~dy~~~tf~~~~d~w~frk~f~~qla~~ 3378 (3550)
T KOG0889|consen 3305 PDDPILLYFDRLAQAYSVL------IGLTAAHQLRGQIFEDIQKTMVPRSILKDYFYKTFTNYSDFWTFRKQFTDQLAVF 3378 (3550)
T ss_pred             cchhhHHHHHHHHHHHhhc------cCchHHHHHHHHHHHHHHHhhCcHHHHHHHHHHhcCChhhhhhhHhHHHHHHHHH
Confidence            2346667777754433211      12233567899999999887 8999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCceEEecCCCcEEEEecccccccC-CCCcCCCcCCccccHHHHHHhccCCccchHHHHHHHHHHHH
Q 037207          414 SMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG-QRLKVPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVL  492 (1989)
Q Consensus       414 SmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekG-krL~vPE~VPFRLTrNIv~ALGptGVEG~FRssceatmr~L  492 (1989)
                      +++.|++.+|.|.|+.+++.++||.|..-||-+..... ..+...|.|||||||||+.++|..|+||.+..++.++.+||
T Consensus      3379 ~~~~~~lni~~~~p~k~~~~~dsG~v~~~~~~~~~~~~~~~~~~~~~VpFRlTpni~~~i~~~~veg~l~~s~~a~ar~l 3458 (3550)
T KOG0889|consen 3379 SFMEYMLNINGRGPAKLTFAKDSGKVFNTDFLPSYISSKPIFHNNEPVPFRLTPNIQEFIGDFGVEGLLAGSMMAIARCL 3458 (3550)
T ss_pred             HHHHHHHhcCCCCccceeeeeccccccchhhccCcccCccccccCCcCCeeecCCchhhhcchhhhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999998554 67899999999999999999999999999999999999999


Q ss_pred             hhChhHHHHHHHHHhhCCCccccccCcCCccccCCccccchhhhhhhhhhhhhhhhhccchhhhHHHHHhhhhHHHHHHH
Q 037207          493 RKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPAVELALE  572 (1989)
Q Consensus       493 Rknkd~LlsLLEaFVrDPLvdW~~~~~~~~a~~~g~er~~me~~~slslf~sRv~ei~~~lq~~~d~l~~~l~~a~~aL~  572 (1989)
                      -++.+.+-..|..|+||+++.|...........                                ..+..++.+.+..++
T Consensus      3459 ~~p~~~l~~~l~~~~RDE~~~w~~~~~~~~~~~--------------------------------~~~~~~v~~~v~~i~ 3506 (3550)
T KOG0889|consen 3459 IEPDFELDPYLQLFFRDEIISWFKQQTKGVPAD--------------------------------PLLEEMVNSNVDLIM 3506 (3550)
T ss_pred             hCCccchhHHHHHHHHHHHHHHhhccccCCcCC--------------------------------hhhhhhHHHHHHHHh
Confidence            999999999999999999999997543322211                                011115566677777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHHhcchhhhhhh
Q 037207          573 RFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAEANCNAEKIRAS  622 (1989)
Q Consensus       573 ~~l~~L~~~e~~s~~~~~~~~~~~~~l~~E~~v~~Lv~eA~~~~enl~~~  622 (1989)
                      +++..+.....       ++-    ...+  ++-.+|+.|++ ++|+|+|
T Consensus      3507 rrv~~~~~~~~-------ge~----~~~~--t~~~lis~A~s-~~nLaqm 3542 (3550)
T KOG0889|consen 3507 RRVASLSSENS-------GEL----PDNQ--TVIDLISQATS-PDNLAQM 3542 (3550)
T ss_pred             hhhhhhccccc-------cCC----CCCc--cHHHHHHHhcC-hhhhhcC
Confidence            77766655432       110    0001  47899999999 8999987

>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2.2e-41  Score=391.24  Aligned_cols=185  Identities=26%  Similarity=0.353  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      |+|++||.+|+++    +++|.+++|.|+|+++++||||||+|+.|+++|.+++..+.                      
T Consensus        51 Ql~~~~~~i~~~~----~l~l~l~~Y~vip~~~~~GlIE~V~ns~tl~~i~k~~~~~~----------------------  104 (293)
T cd05168          51 QLIQQFDRIFKEE----GLPLWLRPYEILVTSSNSGLIETIPDTVSIDSLKKKLTSKF----------------------  104 (293)
T ss_pred             HHHHHHHHHHHHC----CCCceeeeEEEEEccCCceeEEEeCCchhHHHHHHHhccCC----------------------
Confidence            9999999999975    57899999999999999999999999999999987642100                      


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCC-hhHHHHHHHHHHHhhhhHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEG-FKAFSLKLKRYSESVAAMSM  415 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~s-se~w~~~RknFTrSLAVmSm  415 (1989)
                                                                    ..|.+|++..+++ ++.|...|++|++|+|+|||
T Consensus       105 ----------------------------------------------~~l~~~f~~~~~~~~~~~~~a~~nF~~S~A~ySv  138 (293)
T cd05168         105 ----------------------------------------------KSLLDFFKKTFGDPSERFREAQKNFIESLAGYSL  138 (293)
T ss_pred             ----------------------------------------------chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHH
Confidence                                                          0122223222322 46788999999999999999


Q ss_pred             HHhhcccCCCCCCceEEecCCCcEEEEecccccccCCCCcCCCcCCccccHHHHHHhccCCcc--chHHHHHHHHHHHHh
Q 037207          416 VGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIE--GTFRANCEAVVSVLR  493 (1989)
Q Consensus       416 VGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVE--G~FRssceatmr~LR  493 (1989)
                      +||||||||||++||||+. +|++||||||++|+.++....||.|||||||+|+++||+.+.+  |.|+..|+.++.+||
T Consensus       139 v~YvLGigDRH~~NILi~~-~G~liHIDFG~~fg~~~~~~~~E~vPFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~LR  217 (293)
T cd05168         139 ICYLLQIKDRHNGNILIDN-DGHIIHIDFGFMLSNSPGNVGFETAPFKLTQEYIEVMGGVNSDLFNYFKKLFLKGFMALR  217 (293)
T ss_pred             HHHHhhccccCCCceEEcC-CCCEEEEehHHhhcccccCCCCCCCCEEecHHHHHHhCCCCCchhHHHHHHHHHHHHHHH
Confidence            9999999999999999996 9999999999999999766788999999999999999998887  899999999999999


Q ss_pred             hChhHHHHHHHHHhhCCCccc
Q 037207          494 KNKDILLMLLEVFVWDPLIEW  514 (1989)
Q Consensus       494 knkd~LlsLLEaFVrDPLvdW  514 (1989)
                      +|++.|++++++|+++|-+..
T Consensus       218 ~~~~~il~ll~~m~~~~~lp~  238 (293)
T cd05168         218 KHVDRIILLVEIMQSDSKLPC  238 (293)
T ss_pred             hchHHHHHHHHHHccCCCCcc
Confidence            999999999999999974443

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII

>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=1.3e-40  Score=391.92  Aligned_cols=222  Identities=20%  Similarity=0.352  Sum_probs=193.0

Q ss_pred             CCCcEEEEEEec-eeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCcccee
Q 037207          226 LRGIVTIASFSE-EVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIR  280 (1989)
Q Consensus       226 ~~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~Ir  280 (1989)
                      .++.++|.+|.+ .+.|++|+++|++|+|.|+                        |++++||.+|.++    ..+|+++
T Consensus        54 l~P~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~d~~~~~~~~IfK~gDDLRQD~l~lQli~lmd~i~~~~----~ldl~l~  129 (354)
T cd05177          54 LNPALRVKGIDADACSYFTSNAAPLKISFINANPLAKNISIIFKTGDDLRQDMLVLQIVRVMDNIWLQE----GLDMQMI  129 (354)
T ss_pred             CCCCeEEEEEecCccEEehhhcCCCEEEEEecCCCCCeEEEEEeCCCcccHHHHHHHHHHHHHHHHHHc----CCCceEE
Confidence            346689999996 8999999999999999864                        9999999999986    4789999


Q ss_pred             cceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccccccc
Q 037207          281 YYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVIS  360 (1989)
Q Consensus       281 tYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~s  360 (1989)
                      +|.|+|+|+++||||||||+.|+.+|.+.+...                          ..+        +         
T Consensus       130 pY~vl~t~~~~GlIE~V~ns~tl~~I~~~~~~~--------------------------~~~--------~---------  166 (354)
T cd05177         130 IYRCLSTGKTQGLVQMVPDAVTLAKIHRESGLI--------------------------GPL--------K---------  166 (354)
T ss_pred             EEEEEecCCCceEEEEeCChHhHHHHHHhhCCC--------------------------ccc--------c---------
Confidence            999999999999999999999999998653100                          000        0         


Q ss_pred             CCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEE
Q 037207          361 RRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV  440 (1989)
Q Consensus       361 R~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVV  440 (1989)
                                           .+.+.+|++...++...|...+.+|++|+|+|||+||||||||||++||||+ .||+++
T Consensus       167 ---------------------~~~l~~~~~~~~~~~~~~~~a~~nF~~S~AgysvvtYiLGigDRHn~NILi~-~~G~~~  224 (354)
T cd05177         167 ---------------------ENTIEKWFHMHNKLKEDYDKAVRNFFHSCAGWCVVTFILGVCDRHNDNIMLT-HSGHMF  224 (354)
T ss_pred             ---------------------hhhHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCceeEc-CCCCEE
Confidence                                 1124556666667778899999999999999999999999999999999999 799999


Q ss_pred             EEecccccccCCCCc--CCCcCCccccHHHHHHhccCCccc----hHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccc
Q 037207          441 HIDYNVCFDKGQRLK--VPEIVPFRLTQTIEAALGLTGIEG----TFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEW  514 (1989)
Q Consensus       441 HIDFG~cFekGkrL~--vPE~VPFRLTrNIv~ALGptGVEG----~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW  514 (1989)
                      |||||++|+.++.+.  .||+||||||++|+.++|..|.++    .|+..|+.++.+||+|.+.|++++++|+++|+-+|
T Consensus       225 HIDFG~ilg~~~~~~~~~~E~~PF~LT~emv~~~~~GG~~s~~f~~F~~~c~~a~~~lR~~~~~il~l~~lm~~s~iP~~  304 (354)
T cd05177         225 HIDFGKFLGHAQTFGSIKRDRAPFIFTSEMEYFITEGGKKPQRFQRFVELCCRAYNIVRKHSQLLLNLLEMMLHAGLPEL  304 (354)
T ss_pred             EEehHHhcCCCccccCCCcCCCCeeccHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCccc
Confidence            999999999986433  489999999999999998877764    79999999999999999999999999999999999


Q ss_pred             cc
Q 037207          515 TR  516 (1989)
Q Consensus       515 ~~  516 (1989)
                      ..
T Consensus       305 ~~  306 (354)
T cd05177         305 KD  306 (354)
T ss_pred             Cc
Confidence            74

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n

>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2.7e-39  Score=381.78  Aligned_cols=222  Identities=23%  Similarity=0.351  Sum_probs=181.1

Q ss_pred             CCcEEEEEEec-eeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCccceec
Q 037207          227 RGIVTIASFSE-EVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIRY  281 (1989)
Q Consensus       227 ~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~Irt  281 (1989)
                      ++.++|.++.+ ++.|++|+++|++|+|.+.                        |++++||++|++.    +.+|++++
T Consensus        58 dP~~~v~~i~~~~~~v~~S~~~Pl~l~f~~~~~~g~~~~~IfK~gDDLRQD~l~lQli~lm~~i~k~~----~ldL~l~p  133 (362)
T cd05173          58 NPSIILSELNVEKCKYMDSKMKPLWIVYNNKLFGGDSLGIIFKNGDDLRQDMLTLQILRLMDTLWKEA----GLDLRIVP  133 (362)
T ss_pred             CCceEEEEEEcCceEEecccCCCeEEEEeecCCCCCEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHC----CCCeeeEE
Confidence            45689999985 5999999999999999642                        9999999999975    57899999


Q ss_pred             ceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccC
Q 037207          282 YSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISR  361 (1989)
Q Consensus       282 YsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR  361 (1989)
                      |.|+|+|+++||||||+|+.|+++|...+....                 ..              .             
T Consensus       134 Y~vi~t~~~~GlIE~V~ns~tl~~I~~~~~~~~-----------------~~--------------~-------------  169 (362)
T cd05173         134 YGCLATGDRSGLIEVVSSAETIADIQLNSSNVA-----------------AA--------------A-------------  169 (362)
T ss_pred             EEEEEccCCceEEEEeCCchhHHHHHHhccccc-----------------hh--------------c-------------
Confidence            999999999999999999999999875421000                 00              0             


Q ss_pred             CCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEE
Q 037207          362 RDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVH  441 (1989)
Q Consensus       362 ~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVH  441 (1989)
                                .|       ..+.|.+|+... .+.+.|...+.+|++|+|+||++||||||||||++||||+ .+|+++|
T Consensus       170 ----------~f-------~~~~l~~~l~~~-~~~~~~~~a~~nF~~S~AgYsvvtYILGIGDRHn~NILi~-~~G~l~H  230 (362)
T cd05173         170 ----------AF-------NKDALLNWLKEY-NSGDDLERAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVR-KNGQLFH  230 (362)
T ss_pred             ----------cc-------ChhHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEC-CCCCEEE
Confidence                      00       001233333221 1224455678999999999999999999999999999999 7999999


Q ss_pred             EecccccccC--CCCcCCCcCCccccHHHHHHhc--cCC---ccchHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccc
Q 037207          442 IDYNVCFDKG--QRLKVPEIVPFRLTQTIEAALG--LTG---IEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEW  514 (1989)
Q Consensus       442 IDFG~cFekG--krL~vPE~VPFRLTrNIv~ALG--ptG---VEG~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW  514 (1989)
                      ||||++|+..  +....||+||||||++|+++||  ..|   ..|.|+..|+.++.+||+|.+.|++++++|+..++-++
T Consensus       231 IDFG~ilg~~~~~~~~~~E~vPFkLT~emv~vm~~G~~g~s~~~~~F~~~c~~a~~~LRk~~~lil~l~~lM~~s~ip~~  310 (362)
T cd05173         231 IDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQYCEDAYLILRKNGNLFITLFALMLTAGLPEL  310 (362)
T ss_pred             EehHHhhccCCcccCCCCCCCCeeecHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCccc
Confidence            9999999874  3445699999999999999995  233   46899999999999999999999999999998888776


Q ss_pred             c
Q 037207          515 T  515 (1989)
Q Consensus       515 ~  515 (1989)
                      .
T Consensus       311 ~  311 (362)
T cd05173         311 T  311 (362)
T ss_pred             c
Confidence            5

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and de

>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=5.8e-39  Score=378.24  Aligned_cols=217  Identities=21%  Similarity=0.334  Sum_probs=173.8

Q ss_pred             cEEEEE-EeceeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCccceecce
Q 037207          229 IVTIAS-FSEEVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIRYYS  283 (1989)
Q Consensus       229 ~VrI~r-F~p~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~IrtYs  283 (1989)
                      .+++.+ +.+.++|++|+++|++|+|.|.                        |++++||.+|+++    ..+|++++|.
T Consensus        60 ~~~~~~~~~~~~~v~~Sk~~Pl~l~f~~~~~~g~~~~~IfK~gDDLRQD~l~~Qli~lmd~i~k~~----~ldL~l~pY~  135 (361)
T cd05174          60 SIILCEVCVDQCTFMDSKMKPLWIMYKNEEAGGGSVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQE----GLDLRMTPYG  135 (361)
T ss_pred             ceEEEEEEcCcEEEEeccCCceEEEEeecCCCCCEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHC----CCCeeeEEEE
Confidence            355555 4589999999999999999863                        9999999999875    4799999999


Q ss_pred             eeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCC
Q 037207          284 VTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRD  363 (1989)
Q Consensus       284 VIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~d  363 (1989)
                      |+|+|+++||||||+|+.|+++|.+.+....                 ..       ..|+                   
T Consensus       136 vi~tg~~~GlIE~V~ns~Tl~~I~~~~~~~~-----------------~~-------~~f~-------------------  172 (361)
T cd05174         136 CLSTGDKTGLIEVVKNSDTIANIQLNKSNMA-----------------AT-------AAFN-------------------  172 (361)
T ss_pred             EEEecCCceEEEEeCCchhHHHHHHhhcccc-----------------hh-------cccc-------------------
Confidence            9999999999999999999999976431100                 00       0000                   


Q ss_pred             CChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHH-HHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEE
Q 037207          364 WPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFS-LKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHI  442 (1989)
Q Consensus       364 wp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~-~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHI  442 (1989)
                                        .+.+.+|+..  .++++|| ..+.+|++|+|+||++||||||||||++||||+ .+|+++||
T Consensus       173 ------------------~~~l~~~l~~--~~~~~~~~~A~~nF~~S~AgysVvtYiLGIGDRHn~NILi~-~~G~l~HI  231 (361)
T cd05174         173 ------------------KDALLNWLKS--KNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHI  231 (361)
T ss_pred             ------------------chHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHHHhcccCcCccceeEc-CCCCEEEE
Confidence                              0113333332  2333344 568999999999999999999999999999998 69999999


Q ss_pred             ecccccccC--CCCcCCCcCCccccHHHHHHhccCCcc-----chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcc
Q 037207          443 DYNVCFDKG--QRLKVPEIVPFRLTQTIEAALGLTGIE-----GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE  513 (1989)
Q Consensus       443 DFG~cFekG--krL~vPE~VPFRLTrNIv~ALGptGVE-----G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvd  513 (1989)
                      |||++|+..  +....||+||||||++|+++||..|..     |.|+..|+.++.+||+|.+.|++++++|+...+-+
T Consensus       232 DFG~ilg~~~~~~~~~~E~vPFkLT~e~v~vmg~G~~~~s~~f~~F~~~c~~a~~~LRk~~~~il~l~~lM~~sgip~  309 (361)
T cd05174         232 DFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCEQAYKILRRHGTLFLHLFALMKAAGLPE  309 (361)
T ss_pred             ehHHhhcCCcccCCCCCCCCCeeccHHHHHHHccCCCCCCchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCc
Confidence            999999875  334579999999999999999754322     59999999999999999999999999998544433

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and

>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=4e-39  Score=380.05  Aligned_cols=217  Identities=22%  Similarity=0.369  Sum_probs=185.2

Q ss_pred             CCcEEEEEEe-ceeEEecCCCCceEEEEEcH---------------------------HHHHHHHHHHhcCCccCCCccc
Q 037207          227 RGIVTIASFS-EEVSILSTKTKPKKLVILGQ---------------------------MLLQAVNSFLRSSPATRSHSLG  278 (1989)
Q Consensus       227 ~~~VrI~rF~-p~V~VL~SKqrPRRLtI~GS---------------------------QLFrLINsLL~kdkETRRR~L~  278 (1989)
                      ++.+++.++. +.+.|++|+++|++|+|.+.                           |++++||.+|.++    .++|+
T Consensus        60 ~P~~~~~~i~~~~~~v~~S~~~Pl~l~f~~~d~~~~~~~~~~~IfK~GDDLRQD~l~lQli~lmd~i~~~~----~ldL~  135 (365)
T cd00894          60 DPGLRAGALVIEKCKVMASKKKPLWLEFKCADPTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETE----SLDLC  135 (365)
T ss_pred             CCceEEEEEEcCceEEEcccCCceEEEEECCCCCccCCCceeEEEeCCCcccHHHHHHHHHHHHHHHHHHc----CCCeE
Confidence            4568888885 68999999999999999852                           9999999999875    57999


Q ss_pred             eecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccccc
Q 037207          279 IRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRV  358 (1989)
Q Consensus       279 IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v  358 (1989)
                      +++|.|+|+++++||||||+|+.|+++|.+.....                   .      ..                 
T Consensus       136 l~pY~vi~tg~~~GlIE~V~ns~tl~~I~~~~~~~-------------------~------~~-----------------  173 (365)
T cd00894         136 LLPYGCISTGDKIGMIEIVKDATTIAKIQQSTVGN-------------------T------GA-----------------  173 (365)
T ss_pred             EEEEEEEEecCCceEEEEcCCchhHHHHHHhcccc-------------------c------cc-----------------
Confidence            99999999999999999999999999987532000                   0      00                 


Q ss_pred             ccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCc
Q 037207          359 ISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGD  438 (1989)
Q Consensus       359 ~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGe  438 (1989)
                                           .....|++|+....++.+.|...+.+|++|+|+||++||||||||||++||||+ .+|+
T Consensus       174 ---------------------~k~~~l~~~l~~~~~~~~~~~~a~~nFi~S~AgYsV~tYiLGIgDRHndNImi~-~~G~  231 (365)
T cd00894         174 ---------------------FKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGN  231 (365)
T ss_pred             ---------------------ccchhHHHHHHHhCCCHHHHHHHHHHHHHHhHHHHHHHHhccccCccccceeEc-CCCC
Confidence                                 001235566666677788899999999999999999999999999999999999 7999


Q ss_pred             EEEEecccccccCCC-Cc-CCCcCCccccHHHHHHhccCCcc-----chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCC
Q 037207          439 IVHIDYNVCFDKGQR-LK-VPEIVPFRLTQTIEAALGLTGIE-----GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPL  511 (1989)
Q Consensus       439 VVHIDFG~cFekGkr-L~-vPE~VPFRLTrNIv~ALGptGVE-----G~FRssceatmr~LRknkd~LlsLLEaFVrDPL  511 (1989)
                      +||||||++|+.++. +. .||+||||||++|+++||+.|.+     +.|+..|+.++.+||+|.+.|++++++++.--+
T Consensus       232 lfHIDFG~ilg~~~~~~gi~~E~~PFkLT~e~v~vmg~~gg~~s~~f~~F~~~c~~a~~~LRk~~~lil~L~~lM~~sgi  311 (365)
T cd00894         232 LFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMMLMTGM  311 (365)
T ss_pred             EEEEeeHHhhCCCCccCCCCCCCCCeeecHHHHHHhCccCCcCChhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCC
Confidence            999999999998853 33 49999999999999999988766     479999999999999999999999999985433

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and

>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=4.5e-39  Score=371.49  Aligned_cols=185  Identities=26%  Similarity=0.393  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      |+|++||.+|+..    +++|.+++|.|||+|+++||||||+|+.|+++|.+++..                        
T Consensus        51 Ql~~l~~~i~~~~----~l~l~l~~Y~vi~~s~~~GlIE~V~ns~tl~~i~~~~~~------------------------  102 (289)
T cd00893          51 QIITELQKIFELM----FLDLWLNPYLVLPVSKTGGIIEFIPNSISIHEIKKQQIN------------------------  102 (289)
T ss_pred             HHHHHHHHHHHHc----CCCceeEEEEEEECCCCceeEEEeCCchhHHHHHHhccc------------------------
Confidence            9999999999875    579999999999999999999999999999999764300                        


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMV  416 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmV  416 (1989)
                       +   +++                           .|.+   .          + ..++++.|...|.+|++|+|+|||+
T Consensus       103 -~---l~~---------------------------~~~~---~----------~-~~~~~~~~~~a~~nF~~SlA~ySvv  137 (289)
T cd00893         103 -S---LYD---------------------------YFLE---L----------Y-GSYTTEAFLQARYNFIESMAGYSLL  137 (289)
T ss_pred             -c---HHH---------------------------HHHH---H----------c-CCCCcHHHHHHHHHHHHHHHHHHHH
Confidence             0   010                           0110   0          0 1245678999999999999999999


Q ss_pred             HhhcccCCCCCCceEEecCCCcEEEEecccccccCCCC-cCCCcCCccccHHHHHHhccCCcc--chHHHHHHHHHHHHh
Q 037207          417 GHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRL-KVPEIVPFRLTQTIEAALGLTGIE--GTFRANCEAVVSVLR  493 (1989)
Q Consensus       417 GYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL-~vPE~VPFRLTrNIv~ALGptGVE--G~FRssceatmr~LR  493 (1989)
                      ||||||||||++|||||. +|+++|||||++|+.++.. ..||.|||||||+|+++||+.|.+  |.|+..|+.++.+||
T Consensus       138 ~YiLgigDRH~~NILid~-~G~liHIDFG~ilg~~p~~~~~~E~~PFrLT~emv~~mGg~~s~~f~~F~~~c~~~~~~lR  216 (289)
T cd00893         138 CYLLQIKDRHNGNILLDS-DGHIIHIDFGFILDSSPGNNLGFEPAAFKFTKEMVDFMGGKKSDDFKKFRYLCLRGFIAVR  216 (289)
T ss_pred             HHHhhccccCCCceEECC-CCCEEEEehHHhhCcCCcCCCCCCCCCeeecHHHHHHhCCCCChhHHHHHHHHHHHHHHHh
Confidence            999999999999999995 9999999999999998533 557999999999999999998887  799999999999999


Q ss_pred             hChhHHHHHHHHHhhCCCcccc
Q 037207          494 KNKDILLMLLEVFVWDPLIEWT  515 (1989)
Q Consensus       494 knkd~LlsLLEaFVrDPLvdW~  515 (1989)
                      +|++.|++++++|+++|+-+|.
T Consensus       217 ~~~~~il~ll~~m~~~~lp~~~  238 (289)
T cd00893         217 KHMDLVISLVYLLIFSGLPCFR  238 (289)
T ss_pred             hCHHHHHHHHHHHccCCCcccC
Confidence            9999999999999999999986

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.

>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=1.3e-37  Score=365.67  Aligned_cols=218  Identities=18%  Similarity=0.295  Sum_probs=178.8

Q ss_pred             cEEEEEEe-ceeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCccceecce
Q 037207          229 IVTIASFS-EEVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIRYYS  283 (1989)
Q Consensus       229 ~VrI~rF~-p~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~IrtYs  283 (1989)
                      .+.+.++. ..+.|++|+++|++|+|.++                        |++++||.+|.+.    ..+|++++|.
T Consensus        56 ~~~~~~~~~~~c~v~~S~~~Pl~l~f~~~d~~g~~~~~ifK~gDDLRQD~l~lQli~lmd~i~~~~----~ldL~l~pY~  131 (353)
T cd05176          56 SLVAKELNIKVCSFFSSNAVPLKIALVNADPLGEEINVMFKVGEDLRQDMLALQMIKIMDKIWLQE----GLDLRMVIFK  131 (353)
T ss_pred             ceeEccEehheeEEecccCCceEEEEEccCCCCCEEEEEEeCCCCccHHHHHHHHHHHHHHHHHHC----CCCeEEEEEE
Confidence            35566654 46899999999999999864                        9999999999875    4689999999


Q ss_pred             eeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCC
Q 037207          284 VTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRD  363 (1989)
Q Consensus       284 VIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~d  363 (1989)
                      |+|+|+++||||||||+.|+.+|.+.+..               . +          . +.                   
T Consensus       132 vl~tg~~~GlIE~V~ns~tl~~I~~~~~~---------------~-~----------~-~~-------------------  165 (353)
T cd05176         132 CLSTGKDRGMVELVPASETLRKIQVEYGV---------------T-G----------S-FK-------------------  165 (353)
T ss_pred             EEEcCCCceEEEEeCCcHhHHHHHHHhCc---------------C-C----------c-cc-------------------
Confidence            99999999999999999999998754310               0 0          0 00                   


Q ss_pred             CChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEe
Q 037207          364 WPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHID  443 (1989)
Q Consensus       364 wp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHID  443 (1989)
                                        ...+.+|+....++.+.|...|.+|++|+|+||++||||||||||++||||+ .+|+++|||
T Consensus       166 ------------------~~~l~~~l~~~~~~~~~~~~a~~nFi~S~AgYsv~tYiLGIgDRHn~NILi~-~~Ghl~HID  226 (353)
T cd05176         166 ------------------DKPLAEWLRKYNPAEEEYEKASENFIYSCAGCCVATYVLGICDRHNDNIMLR-STGHMFHID  226 (353)
T ss_pred             ------------------cchHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhhhccccCcCCcceEEc-CCCCEEEEe
Confidence                              0013334444455667888999999999999999999999999999999998 899999999


Q ss_pred             cccccccCCCC--cCCCcCCccccHHHHHHhccCCcc----chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcccc
Q 037207          444 YNVCFDKGQRL--KVPEIVPFRLTQTIEAALGLTGIE----GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT  515 (1989)
Q Consensus       444 FG~cFekGkrL--~vPE~VPFRLTrNIv~ALGptGVE----G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~  515 (1989)
                      ||++|+.++..  ..||++|||||++|+.+||..+..    ..|+..|+.++.+||+|.+.|++++++++.-.+-+..
T Consensus       227 FG~ilg~~~~~g~~~~e~~PFkLT~emv~~mgG~~~~s~~f~~F~~lc~~af~~LRk~~~~il~L~~lM~~s~iP~~~  304 (353)
T cd05176         227 FGKFLGHAQMFGSFKRDRAPFVLTSDMAYVINGGEKPTIRFQLFVDLCCQAYNLIRKHSNLFLNLLSLMTQSGLPELT  304 (353)
T ss_pred             eHHhcCCCccccCCCCCCCCeeecHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCcccC
Confidence            99999987532  348999999999999999843321    3699999999999999999999999999866665543

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n

>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=1.2e-36  Score=354.13  Aligned_cols=215  Identities=21%  Similarity=0.261  Sum_probs=175.4

Q ss_pred             CCcEEEEEEe-ceeEEecCC-CCceEEEEEc--------------------------H---------HHHHHHHHHHhcC
Q 037207          227 RGIVTIASFS-EEVSILSTK-TKPKKLVILG--------------------------Q---------MLLQAVNSFLRSS  269 (1989)
Q Consensus       227 ~~~VrI~rF~-p~V~VL~SK-qrPRRLtI~G--------------------------S---------QLFrLINsLL~kd  269 (1989)
                      ++.+.|.++. .+..|++|+ .+|.+++|..                          .         |++++||.+|++.
T Consensus         5 ~P~~~v~~i~~~~~~~~~S~ak~P~~l~F~~~~~~~~~~~~~~~~~~~~~~~IfK~gDDLRQD~l~~Qli~lm~~i~~~~   84 (311)
T cd05167           5 NPDYVIVGIDYKSGTPLQSHAKAPILVTFKVKDRGGDELEEVDDGKVSWQACIFKVGDDCRQDMLALQLISLFKNIFQSA   84 (311)
T ss_pred             CCceEEEEEEccccEEeccCCCCceEEEEEecCCCccccccccccccceEEEEEeCCCCccHHHHHHHHHHHHHHHHHHC
Confidence            3557788876 577899997 4699998862                          1         9999999999875


Q ss_pred             CccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHH
Q 037207          270 PATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPA  349 (1989)
Q Consensus       270 kETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~a  349 (1989)
                          +++|.+++|.|+|+++++||||||+|+.|+.+|.+.+.                            ..        
T Consensus        85 ----~ldl~l~~Y~vi~t~~~~GlIE~V~ns~s~~~i~~~~~----------------------------~~--------  124 (311)
T cd05167          85 ----GLDLYLFPYRVVATGPGCGVIEVVPNSKSRDQIGRTTD----------------------------NG--------  124 (311)
T ss_pred             ----CCCeEeEEEeEEecCCCceEEEEeCCcHHHHHHHhhcc----------------------------cH--------
Confidence                57899999999999999999999999999988753210                            00        


Q ss_pred             HHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCc
Q 037207          350 LKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDN  429 (1989)
Q Consensus       350 Lke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsN  429 (1989)
                                         ..+.|.+..              ..+++..|...|.+|++|+|+|||+||||||||||++|
T Consensus       125 -------------------l~~~f~~~~--------------~~~~~~~~~~a~~nF~~S~Agysv~tYiLgigDRHn~N  171 (311)
T cd05167         125 -------------------LYEYFTSKY--------------GDESSLAFQKARENFIRSMAAYSLISYLLQIKDRHNGN  171 (311)
T ss_pred             -------------------HHHHHHHHc--------------CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCccc
Confidence                               001111100              12345678899999999999999999999999999999


Q ss_pred             eEEecCCCcEEEEecccccccCCC-CcCCCcCCccccHHHHHHhccCCccc---hHHHHHHHHHHHHhhChhHHHHHHHH
Q 037207          430 ILLDFSSGDIVHIDYNVCFDKGQR-LKVPEIVPFRLTQTIEAALGLTGIEG---TFRANCEAVVSVLRKNKDILLMLLEV  505 (1989)
Q Consensus       430 ILIDr~TGeVVHIDFG~cFekGkr-L~vPE~VPFRLTrNIv~ALGptGVEG---~FRssceatmr~LRknkd~LlsLLEa  505 (1989)
                      ||||. +|+++|||||++|+.++. ...+|+||||||++|+++||+.+..|   .|+..|+.++.+||+|.+.|++++++
T Consensus       172 ILid~-~G~l~HIDFG~il~~~p~~~~~~E~~PFkLT~emv~~mGg~~~s~~f~~F~~~~~~~~~~lR~~~~~il~l~~l  250 (311)
T cd05167         172 IMIDD-DGHIIHIDFGFIFEISPGGNLKFESAPFKLTKEMVQIMGGSMEATPFKWFVELCVRAFLAVRPYMDEIVSLVEL  250 (311)
T ss_pred             eEEcC-CCCEEEEeeHHhhccCCCCCCCcCCCCEeecHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            99995 999999999999998742 23479999999999999999988665   77788999999999999999999999


Q ss_pred             HhhCCCcccc
Q 037207          506 FVWDPLIEWT  515 (1989)
Q Consensus       506 FVrDPLvdW~  515 (1989)
                      |+...+-++.
T Consensus       251 m~~s~lp~~~  260 (311)
T cd05167         251 MLDSGLPCFR  260 (311)
T ss_pred             HHcCCchhhh
Confidence            9976665554

PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole

>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2.5e-35  Score=347.13  Aligned_cols=217  Identities=21%  Similarity=0.346  Sum_probs=175.6

Q ss_pred             CCcEEEEEEec-eeEEecCCCCceEEEEEcH----------------------------HHHHHHHHHHhcCCccCCCcc
Q 037207          227 RGIVTIASFSE-EVSILSTKTKPKKLVILGQ----------------------------MLLQAVNSFLRSSPATRSHSL  277 (1989)
Q Consensus       227 ~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS----------------------------QLFrLINsLL~kdkETRRR~L  277 (1989)
                      ++.++|.++.+ .+.|++|+.+|.+|+|.+.                            |++++||.+|++.    ..+|
T Consensus        58 ~P~~~~~~i~~e~c~v~~S~~~Pl~l~f~~~d~~~~~~~~~~~~IfK~GDDLRQD~l~lQli~lmd~i~~~~----~ldL  133 (366)
T cd05175          58 NPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQ----GLDL  133 (366)
T ss_pred             CCceEEEEEEeccceeechhcCCeEEEEEcCCcccccccCCcceEEeCCCCccHHHHHHHHHHHHHHHHHHC----CCCe
Confidence            35688899875 8899999999999999842                            9999999999885    4789


Q ss_pred             ceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccc
Q 037207          278 GIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRR  357 (1989)
Q Consensus       278 ~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~  357 (1989)
                      ++++|.|+|+++++||||||+|+.|+.+|.+.+.    +           +.. .         -|+             
T Consensus       134 ~l~pY~vl~tg~~~GlIE~V~ns~tl~~I~~~~~----~-----------~~~-~---------~~~-------------  175 (366)
T cd05175         134 RMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGG----L-----------KGA-L---------QFN-------------  175 (366)
T ss_pred             EEEEEEEEEecCCceEEEEcCCchhHHHHHhccc----c-----------ccc-c---------ccC-------------
Confidence            9999999999999999999999999999864310    0           000 0         000             


Q ss_pred             cccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCC
Q 037207          358 VISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSG  437 (1989)
Q Consensus       358 v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TG  437 (1989)
                                              ...+.+|+.... ..+.|...|.+|++|+|+||++||||||||||++||||+ .+|
T Consensus       176 ------------------------~~~l~~~l~~~~-~~~~~~~a~~nF~~S~AgYsV~tYiLGIgDRHndNImi~-~~G  229 (366)
T cd05175         176 ------------------------SHTLHQWLKDKN-KGEMYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDG  229 (366)
T ss_pred             ------------------------chhHHHHHhhcC-CcHHHHHHHHHHHHHHHHHHHHHHHhcccccCccceeEc-CCC
Confidence                                    001222322222 234577789999999999999999999999999999999 699


Q ss_pred             cEEEEecccccccCC-CC-cCCCcCCccccHHHHHHhccCC-----cc--chHHHHHHHHHHHHhhChhHHHHHHHHHhh
Q 037207          438 DIVHIDYNVCFDKGQ-RL-KVPEIVPFRLTQTIEAALGLTG-----IE--GTFRANCEAVVSVLRKNKDILLMLLEVFVW  508 (1989)
Q Consensus       438 eVVHIDFG~cFekGk-rL-~vPE~VPFRLTrNIv~ALGptG-----VE--G~FRssceatmr~LRknkd~LlsLLEaFVr  508 (1989)
                      +++|||||++|+.++ .+ ..||+||||||++|+..||..+     .+  +.|+..|..++.+||+|.+.|++++++++.
T Consensus       230 ~l~HIDFG~iLg~~p~~~~~~~E~~PFkLT~emv~v~~gg~~~~~~s~~f~~F~~lc~~ay~~lRk~~~~ii~L~~lM~~  309 (366)
T cd05175         230 QLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLG  309 (366)
T ss_pred             CEEEEehHHhhcCCCccCCCCCCCCCeEecHHHHHHhccCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999874 33 4699999999999999997543     23  589999999999999999999999999974


Q ss_pred             CCC
Q 037207          509 DPL  511 (1989)
Q Consensus       509 DPL  511 (1989)
                      --+
T Consensus       310 sgi  312 (366)
T cd05175         310 SGM  312 (366)
T ss_pred             CCC
Confidence            333

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and

>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases

Probab=100.00  E-value=2e-34  Score=339.01  Aligned_cols=215  Identities=17%  Similarity=0.284  Sum_probs=179.1

Q ss_pred             CCCcEEEEEEe-ceeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCcccee
Q 037207          226 LRGIVTIASFS-EEVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIR  280 (1989)
Q Consensus       226 ~~~~VrI~rF~-p~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~Ir  280 (1989)
                      .++.++|.++. +.+.|++|+.+|.+|+|.+.                        |++++||.+|++.    ..+|+++
T Consensus        54 ldP~~~v~~i~~~~~~v~~S~~~Pl~l~f~~~d~~~~~~~~IfK~GDDLRQD~l~lQli~lmd~i~~~~----~ldl~l~  129 (354)
T cd00895          54 LSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRVIFKCGDDLRQDMLTLQMIRIMNKIWVQE----GLDMRMV  129 (354)
T ss_pred             CCCCeEEEEEEcCceEEecccCCCeEEEEEecCCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHHHc----CCCceEE
Confidence            34568888987 58899999999999999864                        9999999999986    4789999


Q ss_pred             cceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccccccc
Q 037207          281 YYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVIS  360 (1989)
Q Consensus       281 tYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~s  360 (1989)
                      +|.|+|+|+++|+||||||+.|+.+|.+.+..               . +          . +       +         
T Consensus       130 pY~vl~tg~~~G~IE~V~ns~tl~~I~~~~g~---------------~-g----------~-~-------~---------  166 (354)
T cd00895         130 IFRCFSTGRGRGMVEMIPNAETLRKIQVEHGV---------------T-G----------S-F-------K---------  166 (354)
T ss_pred             EEEEEecCCCceEEEEeCChhhHHHHHHHhCc---------------C-c----------c-c-------c---------
Confidence            99999999999999999999999999764210               0 0          0 0       0         


Q ss_pred             CCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEE
Q 037207          361 RRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV  440 (1989)
Q Consensus       361 R~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVV  440 (1989)
                                           ...|.+|+....++...|...+.||++|+|+||+++|||||||||++||||+ .+|+++
T Consensus       167 ---------------------~~~l~~~l~~~~~~~~~~~~a~~nFi~S~AgYsV~tYiLgIgDRHndNImi~-~~Ghlf  224 (354)
T cd00895         167 ---------------------DRPLADWLQKHNPTEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLK-TTGHMF  224 (354)
T ss_pred             ---------------------cchHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHccccccCCCceeEc-CCCCEE
Confidence                                 0013333433445566788899999999999999999999999999999999 899999


Q ss_pred             EEecccccccCCCC--cCCCcCCccccHHHHHHhccCCcc----chHHHHHHHHHHHHhhChhHHHHHHHHHhhC
Q 037207          441 HIDYNVCFDKGQRL--KVPEIVPFRLTQTIEAALGLTGIE----GTFRANCEAVVSVLRKNKDILLMLLEVFVWD  509 (1989)
Q Consensus       441 HIDFG~cFekGkrL--~vPE~VPFRLTrNIv~ALGptGVE----G~FRssceatmr~LRknkd~LlsLLEaFVrD  509 (1989)
                      |||||++|+..+..  ..+|++||+||++|+.+||..|.+    ..|+..|..++.+||+|.+.|++++++++.-
T Consensus       225 HIDFG~iLg~~~~~g~~~re~~PF~Lt~emv~vm~gg~~~S~~f~~F~~lc~~ay~~lRk~~~~il~L~~lM~~s  299 (354)
T cd00895         225 HIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSC  299 (354)
T ss_pred             EEeeHHhcCCCcccCCCCcCCCCccccHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence            99999999976422  357999999999999999854443    2799999999999999999999999999953

PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not

>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=274.06  Aligned_cols=212  Identities=23%  Similarity=0.377  Sum_probs=166.9

Q ss_pred             eceeEEecCCCCceEEEEEcH-------------------------HHHHHHHHHHhcCCccCCCccceecceeeEecCC
Q 037207          236 SEEVSILSTKTKPKKLVILGQ-------------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGR  290 (1989)
Q Consensus       236 ~p~V~VL~SKqrPRRLtI~GS-------------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~  290 (1989)
                      ..++.||.||.||..+.+-.-                         |++++|..||+..    ..+|++.+|.++|++..
T Consensus       781 iekckvM~SkkrPLwl~~~Np~~~s~~~v~iIFKNGDDLRQDMLtLQmLriMd~iWk~~----glDlrm~PYgcls~Gd~  856 (1076)
T KOG0904|consen  781 IEKCKVMDSKKRPLWLVFENPDAGSNLSVGIIFKNGDDLRQDMLTLQMLRIMDNIWKTE----GLDLRMLPYGCLSTGDR  856 (1076)
T ss_pred             hhhhhhhhccCCceEEEecCCCcccCCceeEEEcCCchHHHHHHHHHHHHHHHHHHHhc----CCCeeccccccccccce
Confidence            367889999999999988421                         9999999999876    47899999999999999


Q ss_pred             cceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHHH
Q 037207          291 AGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKR  370 (1989)
Q Consensus       291 sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkr  370 (1989)
                      +||||-|+++.|+.+|-..-              ++.. +..+                                     
T Consensus       857 iGlIEVV~~s~TIa~IQ~~~--------------g~~~-at~a-------------------------------------  884 (1076)
T KOG0904|consen  857 IGLIEVVRNSETIANIQLNT--------------GNMA-ATAA-------------------------------------  884 (1076)
T ss_pred             eeeEEEecCchhhhhhhhcc--------------ccce-eecc-------------------------------------
Confidence            99999999999998774210              0000 0000                                     


Q ss_pred             HHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEeccccccc
Q 037207          371 KVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDK  450 (1989)
Q Consensus       371 eVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFek  450 (1989)
                               +.++.|.+|+--+.+.-..+-.....||.|||.+|+++|||||||||.|||||. .||++||||||+++|.
T Consensus       885 ---------fn~~~L~~WLKekNp~e~kld~AIe~Ft~SCAGYcVATyVLGIgDRHsDNIMvk-e~GqlFHIDFGHiLGh  954 (1076)
T KOG0904|consen  885 ---------FNKDALLNWLKEKNPGEDKLDAAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVK-ETGQLFHIDFGHILGH  954 (1076)
T ss_pred             ---------CCHHHHHHHHhhcCchHHHHHHHHHHHHHhhccceeeeeeecccccccCceEEe-ccCcEEEEEhhhhhcc
Confidence                     011122333222222222244567899999999999999999999999999998 8999999999999998


Q ss_pred             CC-CC-cCCCcCCccccHHHHHHhccCCcc------chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcc
Q 037207          451 GQ-RL-KVPEIVPFRLTQTIEAALGLTGIE------GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE  513 (1989)
Q Consensus       451 Gk-rL-~vPE~VPFRLTrNIv~ALGptGVE------G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvd  513 (1989)
                      ++ .+ -..|+|||-||+.++..|+-.+.+      +.|+..|+.++-+||+|.+.+++++..++---|-+
T Consensus       955 ~KsKlGi~RERvPFvLT~dFl~VI~~G~~~~~~~eF~kFq~~C~~AYl~lr~H~nLfi~LFsmMl~~glPE 1025 (1076)
T KOG0904|consen  955 FKSKLGINRERVPFVLTYDFLHVIQKGKTKNSEKEFQKFQELCEKAYLALRRHGNLFISLFSMMLGTGLPE 1025 (1076)
T ss_pred             chhhcCcccccCceEeecceeeeecccCCCCchhHHHHHHHHHHHHHHHHHHccccHHHHHHHHHhcCCCc
Confidence            84 34 447999999999999999986653      58999999999999999999999999999654433

>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=6.7e-23  Score=247.19  Aligned_cols=212  Identities=21%  Similarity=0.421  Sum_probs=170.1

Q ss_pred             CCCcEEEEEEe-ceeEEecCCCCceEEEEEcH-----------------------HHHHHHHHHHhcCCccCCCccceec
Q 037207          226 LRGIVTIASFS-EEVSILSTKTKPKKLVILGQ-----------------------MLLQAVNSFLRSSPATRSHSLGIRY  281 (1989)
Q Consensus       226 ~~~~VrI~rF~-p~V~VL~SKqrPRRLtI~GS-----------------------QLFrLINsLL~kdkETRRR~L~Irt  281 (1989)
                      -.+.|+|.++. ++.++++|...|-+|+|+..                       |+.++||.+|++.    .-+|.+++
T Consensus       551 ldp~v~i~~Iip~t~~~FkSsl~Pl~l~fkt~~g~g~y~vIFK~GDDLrQDqlV~Qii~lMd~LLkke----nlDLkLtp  626 (843)
T KOG0906|consen  551 LDPDVLIKGIIPDTASLFKSSLMPLKLTFKTDDGGGKYPVIFKKGDDLRQDQLVLQIIRLMDRLLKKE----NLDLKLTP  626 (843)
T ss_pred             CCCCceEeeecCchhhhhhhccCceeEEEEecCCCCceeEEEecCcchhHHHHHHHHHHHHHHHhccc----ccccccee
Confidence            44668999987 57899999999999999843                       9999999999986    46899999


Q ss_pred             ceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccC
Q 037207          282 YSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISR  361 (1989)
Q Consensus       282 YsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR  361 (1989)
                      |.|+|+|+.-|+||+||+ .||..|...|....   .                       |..+..|            .
T Consensus       627 YkVLatg~~eG~vefI~s-~~la~Ils~~~~I~---~-----------------------ylke~~p------------~  667 (843)
T KOG0906|consen  627 YKVLATGPKEGFVEFIPS-KPLARILSEYHSIL---M-----------------------YLKEDRP------------D  667 (843)
T ss_pred             eEEeccCCCcccEEeecC-CcHHHHHHHHHHHH---H-----------------------HHHhhCC------------C
Confidence            999999999999999975 68888887764311   1                       1110000            0


Q ss_pred             CCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEE
Q 037207          362 RDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVH  441 (1989)
Q Consensus       362 ~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVH  441 (1989)
                      ...|..                             .. ...+++|.+|||.+|+++||||+|||||+|+|+. .+|++||
T Consensus       668 e~ap~g-----------------------------i~-~~v~dnfVkScaGYsVitYILGvGDRhldNLllT-~dGk~FH  716 (843)
T KOG0906|consen  668 ENAPFG-----------------------------IS-PEVMDNFVKSCAGYSVITYILGVGDRHLDNLLLT-KDGKLFH  716 (843)
T ss_pred             cCCCCC-----------------------------CC-hhHHHHHHHhhccceeeeeeecccCCCcCceEEc-cCCcEEE
Confidence            000000                             00 1356899999999999999999999999999999 8999999


Q ss_pred             EecccccccCCCCcCCCcCCccccHHHHHHhccCCcc--chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccc
Q 037207          442 IDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIE--GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEW  514 (1989)
Q Consensus       442 IDFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVE--G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW  514 (1989)
                      ||||++|+..+   .|-+-|..|++.|+.+||.....  -.|++-|..++..||++...|++++++++-.-+-|-
T Consensus       717 iDFgyIlGRDP---KP~pp~MkL~kemve~mgg~es~~Yq~F~s~c~~Af~~LRRssnlIlnLf~LM~~~~IPDi  788 (843)
T KOG0906|consen  717 IDFGYILGRDP---KPFPPPMKLAKEMVEGMGGAESKQYQEFRSYCYEAFLILRRSSNLILNLFSLMADANIPDI  788 (843)
T ss_pred             EeeeeeccCCC---CCCCCccccCHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCCce
Confidence            99999998764   36668999999999999965442  489999999999999999999999999996666443

>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1e-22  Score=255.01  Aligned_cols=208  Identities=19%  Similarity=0.310  Sum_probs=174.7

Q ss_pred             ceeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCccceecceeeEecCCcc
Q 037207          237 EEVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAG  292 (1989)
Q Consensus       237 p~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sG  292 (1989)
                      ..+.+++|...|.||+|+|.                        |++++||.||.+.    +.+|++.+|+++|.|-+.|
T Consensus      1059 ~~CSyFnSNA~PLKitFvnadp~geni~iIfK~gDDLRQDml~lQmI~iMdkIWl~e----gLDlrMViFrc~stG~~rg 1134 (1639)
T KOG0905|consen 1059 RECSYFNSNALPLKITFVNADPLGENISIIFKCGDDLRQDMLVLQMIRIMDKIWLQE----GLDLRMVIFRCLSTGYDRG 1134 (1639)
T ss_pred             cccccccCCCcceEEEEecCCCccccceeeeecCchHHHHHHHHHHHHHHHHHHHhc----CCceeEEEEEeeccccccc
Confidence            35678899999999999993                        9999999999986    5789999999999999999


Q ss_pred             eeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCCCChHHHHHH
Q 037207          293 LIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKV  372 (1989)
Q Consensus       293 LIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreV  372 (1989)
                      |||-||++.||..|-.++-    +           .+                   .+                      
T Consensus      1135 MvElVp~a~TLrKIQve~G----l-----------tG-------------------sf---------------------- 1158 (1639)
T KOG0905|consen 1135 MVELVPNAETLRKIQVEEG----L-----------TG-------------------SF---------------------- 1158 (1639)
T ss_pred             ceeecccHHHHHHHHHHhc----c-----------cc-------------------cc----------------------
Confidence            9999999999988765431    0           00                   00                      


Q ss_pred             HHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEEecccccccCC
Q 037207          373 LLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQ  452 (1989)
Q Consensus       373 F~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGk  452 (1989)
                              .+..|++|+...-++..+|-....||++|||.+|+++|||||+|||.||||+. +||++||||||-.++.++
T Consensus      1159 --------kD~pla~WL~KhNp~e~eYekA~eNFiySCAG~cVaTYVLGIcDRHNDNIMl~-~sGHmFHIDFGKFLGhaQ 1229 (1639)
T KOG0905|consen 1159 --------KDRPLAKWLMKHNPSEFEYEKAVENFIYSCAGWCVATYVLGICDRHNDNIMLT-KSGHMFHIDFGKFLGHAQ 1229 (1639)
T ss_pred             --------ccchHHHHHHhcCCCHHHHHHHHHHHHHhcccceeeeEeeecccccCCceEEe-ccCcEEEEehhhhcchHH
Confidence                    01125666666667777888888999999999999999999999999999998 999999999999988764


Q ss_pred             CC--cCCCcCCccccHHHHHHhccCCcc----chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcc
Q 037207          453 RL--KVPEIVPFRLTQTIEAALGLTGIE----GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE  513 (1989)
Q Consensus       453 rL--~vPE~VPFRLTrNIv~ALGptGVE----G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvd  513 (1989)
                      .+  -...++||-+|-.|..++...+-.    -.|...|+.++..+|+|.+.|+++|..|+.--+-.
T Consensus      1230 Mfg~fKRDRaPFVfTSdMayvINgG~kpt~~fq~FVDlCCrAyNiiRK~t~lllnlL~lM~~agiPe 1296 (1639)
T KOG0905|consen 1230 MFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFVDLCCRAYNIIRKNTNLLLNLLRLMACAGIPE 1296 (1639)
T ss_pred             HhcccccccCCeEEeccchhhhcCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCC
Confidence            32  224799999999999999876654    48999999999999999999999999999765533

>KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.84  E-value=1.8e-20  Score=230.30  Aligned_cols=181  Identities=25%  Similarity=0.383  Sum_probs=154.7

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      ||+..|-.+|...+    -.+++++|.|+-+|.++||||-|+|+.++|+|-+.+-+-.   .                  
T Consensus       606 Qli~~f~~IW~Eeg----vplWlRpykIlvtss~sGLIEtI~da~SIHsIKk~l~~~~---~------------------  660 (847)
T KOG0903|consen  606 QLISAFKDIWQEEG----VPLWLRPYKILVTSSDSGLIETIVDAMSIHSIKKRLPNLA---S------------------  660 (847)
T ss_pred             HHHHHHHHHHHHcC----CcceeeeEEEEEEecCccceeeccchhhHHHHHHhcchhh---h------------------
Confidence            99999999998864    5799999999999999999999999999999987641100   0                  


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMV  416 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmV  416 (1989)
                        .+.|                                          +..   ...++.+.|....+||..|+|.||+|
T Consensus       661 --l~~F------------------------------------------~~~---~g~~NS~~yk~AQrNFvqSlagYSLv  693 (847)
T KOG0903|consen  661 --LRHF------------------------------------------FAA---FGKPNSEKYKSAQRNFVQSLAGYSLV  693 (847)
T ss_pred             --HHHH------------------------------------------HHH---hCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence              0000                                          000   12356677888889999999999999


Q ss_pred             HhhcccCCCCCCceEEecCCCcEEEEecccccccCCCCcCCCcCCccccHHHHHHhccCCccc----hHHHHHHHHHHHH
Q 037207          417 GHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEG----TFRANCEAVVSVL  492 (1989)
Q Consensus       417 GYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVEG----~FRssceatmr~L  492 (1989)
                      +|+|.+.|||..||||| .-|+|+||||||.+...+..--.|.-||.||..+++.||  |++|    -|+..|.+.+.++
T Consensus       694 cYlLQvKDRHNGNILiD-~EGHIIHIDFGFmLsnsPgnvgFEsAPFKLT~EylEvmg--G~~~d~FdyfK~L~l~gf~a~  770 (847)
T KOG0903|consen  694 CYLLQVKDRHNGNILID-EEGHIIHIDFGFMLSNSPGNVGFESAPFKLTTEYLEVMG--GLDSDMFDYFKSLMLQGFMAL  770 (847)
T ss_pred             HHhhhcccccCCceEec-CCCCEEEEeeeeEecCCCCCcccccCchhhHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999 899999999999999887766679999999999999999  8887    7899999999999


Q ss_pred             hhChhHHHHHHHHHhhCCCc
Q 037207          493 RKNKDILLMLLEVFVWDPLI  512 (1989)
Q Consensus       493 Rknkd~LlsLLEaFVrDPLv  512 (1989)
                      |+|.+.|+.+.|+|-.+--.
T Consensus       771 RKhadrIv~lvEiMq~~S~~  790 (847)
T KOG0903|consen  771 RKHADRIVLLVEIMQDGSGM  790 (847)
T ss_pred             HHHHHHHHHHHHHhhccCCC
Confidence            99999999999999764433

>KOG0902 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms]

Probab=99.81  E-value=7.5e-19  Score=224.57  Aligned_cols=182  Identities=23%  Similarity=0.354  Sum_probs=148.5

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      |++.++-.++..-    ..++.+-+|+|+|.+|.||+||.|||+.+=.++-+.                + .+       
T Consensus      1564 Qiislf~~if~~~----gLd~~lfPYrV~aT~pGcGVIEviPn~~SRdqlGr~----------------t-~~------- 1615 (1803)
T KOG0902|consen 1564 QIISLFKNIFQLV----GLDLYLFPYRVVATAPGCGVIEVIPNSKSRDQLGRE----------------T-DN------- 1615 (1803)
T ss_pred             HHHHHHHHHHHHc----CCceEEeeeeeeccCCCCceEEeCCCCccHHHhccc----------------c-cc-------
Confidence            9999999999875    478899999999999999999999999883222110                0 00       


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMV  416 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmV  416 (1989)
                          -.|+                           .|..   +           ....+++.|-+.|.||.+|+|.+|++
T Consensus      1616 ----glye---------------------------yF~~---~-----------~G~~~s~~fq~Ar~NF~~S~A~Ysv~ 1650 (1803)
T KOG0902|consen 1616 ----GLYE---------------------------YFTR---K-----------YGDESSEAFQTARYNFVRSMAGYSVL 1650 (1803)
T ss_pred             ----cHHH---------------------------HHHH---h-----------cCccchHHHHHHHHHHHHHHHHHHHH
Confidence                0111                           1110   0           12356778889999999999999999


Q ss_pred             HhhcccCCCCCCceEEecCCCcEEEEecccccccCC--CCcCCCcCCccccHHHHHHhccCCccc----hHHHHHHHHHH
Q 037207          417 GHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQ--RLKVPEIVPFRLTQTIEAALGLTGIEG----TFRANCEAVVS  490 (1989)
Q Consensus       417 GYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGk--rL~vPE~VPFRLTrNIv~ALGptGVEG----~FRssceatmr  490 (1989)
                      +|.|.+.|||..||||| +-|+++|||||++||..+  .+.+ |. ||.||..|+..||+. .++    .|...|+..+-
T Consensus      1651 s~lLq~KDRHNGNim~D-d~G~~iHIDFGf~~e~sPGgnl~f-E~-~fKLt~Em~~~mgG~-~~~~~f~~f~elcVk~yL 1726 (1803)
T KOG0902|consen 1651 SYLLQIKDRHNGNIMID-DQGHIIHIDFGFMFESSPGGNLGF-EP-PFKLTKEMVMLMGGK-MEAKPFKWFQELCVKGYL 1726 (1803)
T ss_pred             HHHcccccccCCceeEc-cCCCEEEEeeeeEEecCCCCccCc-CC-CccchHHHHHHhCCC-CCCCcHHHHHHHHHHHHH
Confidence            99999999999999999 899999999999999863  3443 77 999999999999932 223    78999999999


Q ss_pred             HHhhChhHHHHHHHHHhhCCCcccc
Q 037207          491 VLRKNKDILLMLLEVFVWDPLIEWT  515 (1989)
Q Consensus       491 ~LRknkd~LlsLLEaFVrDPLvdW~  515 (1989)
                      +.|.+.+.|+...+.|+---|-+++
T Consensus      1727 A~R~~~~~iv~~V~~mldsgLPCfr 1751 (1803)
T KOG0902|consen 1727 AARPYMDAIVSLVQSMLDSGLPCFR 1751 (1803)
T ss_pred             hhchhHHHHHHHHHHHHhcCCCccC
Confidence            9999999999999999998888884

>PTZ00303 phosphatidylinositol kinase; Provisional

Probab=99.69  E-value=8.5e-17  Score=195.77  Aligned_cols=131  Identities=21%  Similarity=0.324  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHhcCCccCCCccceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 037207          257 MLLQAVNSFLRSSPATRSHSLGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVP  336 (1989)
Q Consensus       257 QLFrLINsLL~kdkETRRR~L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vp  336 (1989)
                      |++++|+.||+++.    .+|.+++|+|+|++++.||||.|++. +|.+|....     +                    
T Consensus      1069 QmIrLMDrLLKkEn----LDLKLTPYRVLATG~dsGLIEfVps~-tLAsI~~~~-----I-------------------- 1118 (1374)
T PTZ00303       1069 ISSRLLQMLLSSEI----GNAEMLDYSVLPLSCDSGLIEKAEGR-ELSNLDNMD-----I-------------------- 1118 (1374)
T ss_pred             HHHHHHHHHHHhcC----CCccccceEEEeccCCcccEEEecch-HHHHhhhhH-----H--------------------
Confidence            99999999999874    68999999999999999999999875 455442110     0                    


Q ss_pred             CCchhhhhhhhHHHHhhcccccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHH
Q 037207          337 RPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMV  416 (1989)
Q Consensus       337 rP~dlfy~kl~~aLke~gi~~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmV  416 (1989)
                                .                                       +|+..  .++    ....||++|+|.||++
T Consensus      1119 ----------l---------------------------------------~YLr~--~~t----~~~~NFi~S~AGYsVi 1143 (1374)
T PTZ00303       1119 ----------A---------------------------------------SYVLY--RGT----RSCINFLASAKLFLLL 1143 (1374)
T ss_pred             ----------H---------------------------------------HHHHh--cCc----HHHHHHHHHHHHHHHH
Confidence                      0                                       00000  011    1146999999999999


Q ss_pred             HhhcccCCCCCCceEEecCCCcEEEEecccccccCCCCcCCCcCCccccHHHHHHhc
Q 037207          417 GHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALG  473 (1989)
Q Consensus       417 GYILGLGDRHPsNILIDr~TGeVVHIDFG~cFekGkrL~vPE~VPFRLTrNIv~ALG  473 (1989)
                      +|||||||||++||||+ .+|++||||||++|+....-..+-+-|.|+-..|..+++
T Consensus      1144 TYILgIgDRHngNILId-~dGhLfHIDFGFILg~rtfkeKl~~s~vR~D~~l~eav~ 1199 (1374)
T PTZ00303       1144 NYIFSIGDRHKGNVLIG-TNGALLHIDFRFIFSEKTFVEKLARSTVRIDDAFLAAVE 1199 (1374)
T ss_pred             HHHhccCcccCCceeEc-CCCCEEEEecceeecCchhhhccCCCceehhHHHHHHHH
Confidence            99999999999999999 899999999999998754333455678898888887776

>PF08771 Rapamycin_bind: Rapamycin binding domain; InterPro: IPR009076 Rapamycin and FK506 are potent immunosuppressive agents that bind to the FK506-binding protein (FKBP12), inhibiting its peptidyl-prolyl isomerase activity

Probab=99.44  E-value=1.7e-13  Score=138.02  Aligned_cols=97  Identities=30%  Similarity=0.540  Sum_probs=79.2

Q ss_pred             HHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHHHHHHHHhhcCCCCC
Q 037207           53 ELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPE  132 (1989)
Q Consensus        53 ELiRIavLW~E~Wl~~L~qL~~dv~rRl~~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~~Le~~~a~Ts~~pe  132 (1989)
                      ||+|||+||+|+|+++|+               +|+|.+      +.++   +.+++..+|.|++..|+       ++|+
T Consensus         1 ELiRvAilW~E~W~~~Le---------------~As~~y------~~~~---n~~~m~~~L~pLh~~l~-------k~Pe   49 (100)
T PF08771_consen    1 ELIRVAILWHELWYEALE---------------EASRLY------FGEN---NVEKMFKILEPLHEMLE-------KGPE   49 (100)
T ss_dssp             --SSSSSSHHHHHHHHHH---------------HHHHHH------HTTT----HHHHHHHHHHHHHHHH-------HS-S
T ss_pred             ChHHHHhhHHHHHHHHHH---------------HHHHHH------Hhhc---CHHHHHHHHHHHHHHHc-------CCCC
Confidence            899999999999999995               577876      3444   46788889999998886       4899


Q ss_pred             ChhHHHHHHHHHHHHHHHHHhhcCCc--cccchHHHHHHHHHHHHHHHHh
Q 037207          133 TPHEIWFHEEFGEQLKSAILNFKTPP--ASAAALGDVWRPFDNIAASLAS  180 (1989)
Q Consensus       133 TphE~~F~k~yg~~L~~Aie~lk~~~--~~~~~L~e~W~~fk~I~k~L~~  180 (1989)
                      |+.|.+|++.||..|.+|.+.++++.  +...+++++|+.|+.+++++..
T Consensus        50 T~~E~~F~~~fg~~L~~A~~~~~~y~~t~~~~~l~~aW~~y~~v~~~i~~   99 (100)
T PF08771_consen   50 TLREVSFAQAFGRDLQEAREWLKRYERTGDETDLNQAWDIYYQVYRRIKK   99 (100)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhhCCHhhHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999988643  3467999999999999999864

The rapamycin-FKBP12 complex can then bind to and inhibit the FKBP12-rapamycin-associated protein (FRAP) in humans and RAFT1 in rats, causing cell-cycle arrest []. The FK506-FKBP12 complex cannot bind FRAP, but can bind to and inhibit calcineurin. Rapamycin is able to bind to two proteins, FKBP12 and FRAP, by simultaneously occupying two hydrophobic binding pockets, thereby linking these two proteins together to form a dimer []. The structure of the FKBP12-rapamycin-binding domain of FRAP consists of a core bundle of four helices arranged up-and-down in a left-handed twist. FRAP has been shown to interact in vitro with CLIP-170, a protein involved in microtubule organisation and function []. FRAP is thought to act as a kinase to phosphorylate CLIP-170, thereby regulating its binding to microtubules. FRAP is also thought to cooperate with p85/p110 phosphatidylinositol 3-kinase (PI3K) to induce the activation of the serine/threonine kinase p70 S6 kinase (p70S6K), which in turn phosphorylates the 40S ribosomal protein S6, thereby altering the translation of ribosomal proteins and translation elongation factors [].; GO: 0016772 transferase activity, transferring phosphorus-containing groups; PDB: 2NPU_A 2RSE_B 4FAP_B 1AUE_A 2GAQ_A 1FAP_B 2FAP_B 3FAP_B 1NSG_B.

>PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases

Probab=99.34  E-value=2.9e-13  Score=111.24  Aligned_cols=33  Identities=48%  Similarity=0.957  Sum_probs=27.8

Q ss_pred             cccCHHHHHHHHHHHHcCchhhHhhccccccCC
Q 037207         1957 RNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989 (1989)
Q Consensus      1957 ~~LsV~~QVd~LI~qATs~~NLcqmY~GW~pf~ 1989 (1989)
                      ++|+|++||+.||++|||++|||+||+||+|||
T Consensus         1 e~lsv~~qV~~LI~~At~~~nLa~my~GW~pw~   33 (33)
T PF02260_consen    1 EPLSVEQQVDELISEATDPENLARMYIGWMPWW   33 (33)
T ss_dssp             --S-STHHHHHHHHHHHHHHHHHHHCTSS-TT-
T ss_pred             CCCCHHHHHHHHHHHHcCHHHHHHHhcchhccC
Confidence            368999999999999999999999999999998

Members of the family of PIK-related kinases may act as intracellular sensors that govern radial and horizontal pathways [].; GO: 0005515 protein binding; PDB: 2KIT_A 1W1N_A 2KIO_A.

>KOG0891 consensus DNA-dependent protein kinase [Replication, recombination and repair]

Probab=98.89  E-value=8.5e-10  Score=153.16  Aligned_cols=62  Identities=47%  Similarity=0.772  Sum_probs=60.3

Q ss_pred             cccccchHhHHHHHHHHhcccccccCCCCcccCHHHHHHHHHHHHcCchhhHhhccccccCC
Q 037207         1928 RVARGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989 (1989)
Q Consensus      1928 ~~~e~~N~~A~~vl~RV~~KL~G~df~~~~~LsV~~QVd~LI~qATs~~NLcqmY~GW~pf~ 1989 (1989)
                      ..++.+|.++..|++|+.+||+|+||.+..+++|..||+.||+|||+++||||+|+||||||
T Consensus      2280 ~~~e~~n~~~~~vl~~~~~kltg~~~~~~~~l~v~~qv~~l~~qats~e~lc~~yigwcpfw 2341 (2341)
T KOG0891|consen 2280 VKPEALNARAIQVLKRISDKLTGRDFVHEEPLDVPEQVEKLIQQATSPENLCQCYIGWCPFW 2341 (2341)
T ss_pred             ccccccChhhHHHHHhcccccceeeccCcccCcHHHHHHHHHHhhcChHhhhcccccCCCCC
Confidence            56789999999999999999999999999999999999999999999999999999999999

>KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]

Probab=98.69  E-value=9.2e-09  Score=140.15  Aligned_cols=52  Identities=37%  Similarity=0.634  Sum_probs=50.3

Q ss_pred             HHHHHHHhcccccccCCCCcccCHHHHHHHHHHHHcCchhhHhhccccccCC
Q 037207         1938 ISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989 (1989)
Q Consensus      1938 ~~vl~RV~~KL~G~df~~~~~LsV~~QVd~LI~qATs~~NLcqmY~GW~pf~ 1989 (1989)
                      +.++.||++||.|....++.||||+|||+.||++|||.+|||+||+||.|||
T Consensus      2331 ~~~i~~i~~rlqG~~~~~glPLSveGq~~~LI~eATseenL~~MYIGW~p~l 2382 (2382)
T KOG0890|consen 2331 RLVIGRIRGRLQGAMKVDGLPLSVEGQASSLIEEATSEENLSEMYIGWMPFL 2382 (2382)
T ss_pred             HHHHhHHHHHHhccCcCCCCccchhhHHHHHHHHhcCHHHHHHHHhhhhccC
Confidence            8999999999999877789999999999999999999999999999999998

>KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning]

Probab=98.28  E-value=4.1e-07  Score=125.42  Aligned_cols=54  Identities=37%  Similarity=0.627  Sum_probs=50.5

Q ss_pred             hHhHHHHHHHHhcccccccCCCCcccCHHHHHHHHHHHHcCchhhHhhccccccCC
Q 037207         1934 NAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989 (1989)
Q Consensus      1934 N~~A~~vl~RV~~KL~G~df~~~~~LsV~~QVd~LI~qATs~~NLcqmY~GW~pf~ 1989 (1989)
                      +..|.+++-|+.+||.|..  .|..+||++||+.||+|||||.|||.||+||.||.
T Consensus      2753 d~~a~r~l~r~q~kl~g~e--~g~~~sVe~qv~~LIqqA~dpsnLs~~fpGW~a~~ 2806 (2806)
T KOG0892|consen 2753 DRNAVRALMRAQRKLDGVE--QGTMLSVEAQVQELIQQATDPSNLSLMFPGWSAFQ 2806 (2806)
T ss_pred             chHHHHHHHHHHHHhhhhh--ccccccHHHHHHHHHHHhcCchhhhhhcCCCcCcC
Confidence            5889999999999999977  56788999999999999999999999999999994

>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]

Probab=98.01  E-value=3.1e-06  Score=120.57  Aligned_cols=59  Identities=34%  Similarity=0.528  Sum_probs=56.9

Q ss_pred             ccchHhHHHHHHHHhcccccccCCCCcccCHHHHHHHHHHHHcCchhhHhhccccccCC
Q 037207         1931 RGKNAYAISVLRRVEMKLDGRDIVENRNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989 (1989)
Q Consensus      1931 e~~N~~A~~vl~RV~~KL~G~df~~~~~LsV~~QVd~LI~qATs~~NLcqmY~GW~pf~ 1989 (1989)
                      +..|..+..+++|+..||+|.|......+.|++||+.||.+|||+.|||+||+||||||
T Consensus      2047 ~~~~~~~~~v~~rf~~kl~~~~~~~~~~l~I~~sv~~li~~a~d~~~L~~~yi~w~~f~ 2105 (2105)
T COG5032        2047 EIQNNEIVNVLERFRLKLSEKDAEKFVDLLINKSVESLITQATDPFQLATMYIGWMPFW 2105 (2105)
T ss_pred             chHHHHHHHHHHHHHHHhhhhhhhhhcCCcHHHHHHHHHHHHcCHHHHHhhccccccCC
Confidence            57799999999999999999999888999999999999999999999999999999999

>PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases

Probab=88.01  E-value=0.28  Score=41.46  Aligned_cols=24  Identities=17%  Similarity=0.314  Sum_probs=21.8

Q ss_pred             hhhhhhHHHHHHHHhcchhhhhhhH
Q 037207          599 VLHETSTKSMVAEANCNAEKIRASF  623 (1989)
Q Consensus       599 l~~E~~v~~Lv~eA~~~~enl~~~~  623 (1989)
                      ++.|.+|..|+++|++ ++|||+||
T Consensus         3 lsv~~qV~~LI~~At~-~~nLa~my   26 (33)
T PF02260_consen    3 LSVEQQVDELISEATD-PENLARMY   26 (33)
T ss_dssp             S-STHHHHHHHHHHHH-HHHHHHHC
T ss_pred             CCHHHHHHHHHHHHcC-HHHHHHHh
Confidence            5788999999999999 99999998

Members of the family of PIK-related kinases may act as intracellular sensors that govern radial and horizontal pathways [].; GO: 0005515 protein binding; PDB: 2KIT_A 1W1N_A 2KIO_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1989
2y3a_A	1092	Crystal Structure Of P110beta In Complex With Icsh2		6e-07
2x6f_A	696	The Crystal Structure Of The Drosophila Class Iii P		2e-05
4anv_A	980	Complexes Of Pi3kgamma With Isoform Selective Inhib		2e-05
3l54_A	966	Structure Of Pi3k Gamma With Inhibitor Length = 966		2e-05
4dk5_A	959	Crystal Structure Of Human Pi3k-Gamma In Complex Wi		2e-05
3ene_A	959	Complex Of Pi3k Gamma With An Inhibitor Length = 95		2e-05
1e8x_A	961	Structural Insights Into Phoshoinositide 3-Kinase E		2e-05
1e7u_A	961	Structure Determinants Of Phosphoinositide 3-Kinase		2e-05
1e8y_A	966	Structure Determinants Of Phosphoinositide 3-Kinase		2e-05
3dbs_A	960	Structure Of Pi3k Gamma In Complex With Gdc0941 Len		2e-05
3cst_A	966	Crystal Structure Of Pi3k P110gamma Catalytical Dom		2e-05
3qaq_A	960	Crystal Structure Of Pi3k-Gamma In Complex With Tri		2e-05
3apc_A	966	Crystal Structure Of Human Pi3k-Gamma In Complex Wi		2e-05
1he8_A	965	Ras G12v-Pi 3-Kinase Gamma Complex Length = 965		2e-05
4anu_A	980	Complexes Of Pi3kgamma With Isoform Selective Inhib		2e-05
3nzs_A	954	Structure-Based Optimization Of Pyrazolo -Pyrimidin		2e-05
4ajw_A	934	Discovery And Optimization Of New Benzimidazole- An		3e-05
4anx_A	980	Complexes Of Pi3kgamma With Isoform Selective Inhib		4e-05
2wxf_A	940	The Crystal Structure Of The Murine Class Ia Pi 3-K		4e-05
3ls8_A	614	Crystal Structure Of Human Pik3c3 In Complex With 3		7e-05
3ihy_A	600	Human Pik3c3 Crystal Structure Length = 600		7e-05

>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of P85beta And The Drug Gdc-0941 Length = 1092

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 403  LKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKG------QRLKV 456
            ++ ++ S A   +  ++LG+GDRH DNI++   +G + HID+             +R +V
Sbjct: 920  IEEFTLSCAGYCVASYVLGIGDRHSDNIMVK-KTGQLFHIDFGHILGNFKSKFGIKRERV 978
Query: 457  PEIVPFRLTQTI-EAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWT 515
            P I+ +     I +   G T   G FR  CE    +LR++ ++ + L  + +   L E T
Sbjct: 979  PFILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALMLTAGLPELT 1038
Query: 516  RGD----FHDDAAIGGEERKGME 534
                     D  A+G  E + ++
Sbjct: 1039 SVKDIQYLKDSLALGKSEEEALK 1061

>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase Vps34 In Complex With 3-Methyladenine Length = 696

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 406 YSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLT 465
           Y +S A   ++ ++LG+GDRHLDN+LL  ++G + HID+      G+  K          
Sbjct: 534 YIKSCAGYCVITYLLGVGDRHLDNLLLT-TNGKLFHIDFGYIL--GRDPKPMPPPMKLSK 590
Query: 466 QTIEAALGLTG-IEGTFRANCEAVVSVLRKNKDILLMLLEVFV 507
           + +EA  G++      FR  C      LR++ +++L L  + V
Sbjct: 591 EMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMV 633

>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 783 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 841
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFVWDPL 511
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +   +
Sbjct: 842 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMMLMTGM 901
Query: 512 IEWT 515
            E T
Sbjct: 902 PELT 905

>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor Length = 966

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDVCVKAYLALRHHTNLLIILFSMML 893

>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A Pyridyl- Triazine Inhibitor Length = 959

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 778 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 836
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 837 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892

>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor Length = 959

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 778 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 836
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 837 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892

>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase Enzymatic Mechanism And Signalling Length = 961

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 780 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIS-ETGNLFHIDFGHILGNYKSFLGIN 838
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 839 KERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMML 894

>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin And Staurosporine Length = 966

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893

>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941 Length = 960

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893

>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In Complex With Organoruthenium Inhibitor E5e2 Length = 966

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893

>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With Triazine-Benzimidazole 1 Length = 960

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 779 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 837
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 838 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 893

>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With Ch5132799 Length = 966

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 785 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 843
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 844 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 899

>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex Length = 965

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 778 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 836
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 837 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 892

>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors. Length = 980

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 783 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 841
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 842 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897

>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And -Pyridine Inhibitors Of Pi3-Kinase Length = 954

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 775 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHILGNYKSFLGIN 833
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 834 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 889

>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors For The Treatment Of Phosphatase And Tensin Homologue (Pten)-Deficient Cancers Length = 934

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 397 KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQ---- 452
           +A    ++ ++ S A   +  ++LG+GDRH DNI++   SG + HID+       +    
Sbjct: 756 EALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKTKFG 814
Query: 453 --RLKVPEIVPFRLTQTIEAALGLTGIEGT---FRANCEAVVSVLRKNKDILLMLL 503
             R +VP I+ +     I+   G T        FR  CE   ++LR++  + L L 
Sbjct: 815 INRERVPFILTYDFVHVIQQ--GKTNNSEKFERFRGYCERAYTILRRHGLLFLHLF 868

>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 399 FSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDY-NVCFDKGQRLKV- 456
           F   ++R+  S A   +   +LG+GDRH DNI++   +G++ HID+ ++  +    L + 
Sbjct: 783 FQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMIT-ETGNLFHIDFGHINGNYKSFLGIN 841
Query: 457 PEIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
            E VPF LT      +G +G + +     F+  C      LR + ++L++L  + +
Sbjct: 842 KERVPFVLTPDFLFVMGTSGKKTSPHFQKFQDICVKAYLALRHHTNLLIILFSMML 897

>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase P110delta In Complex With Pik-39. Length = 940

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 397 KAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQ---- 452
           +A    ++ ++ S A   +  ++LG+GDRH DNI++   SG + HID+       +    
Sbjct: 762 EALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKTKFG 820
Query: 453 --RLKVPEIVPFRLTQTIEAALGLTGIEGT---FRANCEAVVSVLRKNKDILLMLL 503
             R +VP I+ +     I+   G T        FR  CE   ++LR++  + L L 
Sbjct: 821 INRERVPFILTYDFVHVIQQ--GKTNNSEKFERFRGYCERAYTILRRHGLLFLHLF 874

>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4- Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol Length = 614

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 406 YSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLT 465
           Y +S A   ++ +ILG+GDRHLDN+LL   +G + HID+     +  +   P +   +  
Sbjct: 460 YVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFGYILGRDPKPLPPPMKLNK-- 516
Query: 466 QTIEAALGLTGIEG----TFRANCEAVVSVLRKNKDILLMLLEVFV 507
              E   G+ G +      FR  C      LR+  +++L L  + V
Sbjct: 517 ---EMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMV 559

>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure Length = 600

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 406 YSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLT 465
           Y +S A   ++ +ILG+GDRHLDN+LL   +G + HID+     +  +   P +   +  
Sbjct: 446 YVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFGYILGRDPKPLPPPMKLNK-- 502
Query: 466 QTIEAALGLTGIEG----TFRANCEAVVSVLRKNKDILLMLLEVFV 507
              E   G+ G +      FR  C      LR+  +++L L  + V
Sbjct: 503 ---EMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMV 545

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1989
1e7u_A	961	Phosphatidylinositol 3-kinase catalytic subunit; p	2e-16
3ls8_A	614	Phosphatidylinositol 3-kinase catalytic subunit ty	2e-15
2x6h_A	696	GH13170P, VPS34, phosphotidylinositol 3 kinase 59F	3e-15
3hhm_A	1091	Phosphatidylinositol-4,5-bisphosphate 3-kinase cat	2e-13
2wxf_A	940	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	3e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
2y3a_A	1092	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	2e-12
1w1n_A	33	Phosphatidylinositol 3-kinase TOR1; target of rapa	5e-12
2npu_A	126	FKBP12-rapamycin complex-associated protein; four-	7e-08

>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A Length = 614

 Score = 81.0 bits (199), Expect = 2e-15
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 6/112 (5%)

Query: 398 AFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVP 457
             +  +  Y +S A   ++ +ILG+GDRHLDN+LL   +G + HID+     +      P
Sbjct: 452 ISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFGYILGRD---PKP 507

Query: 458 EIVPFRLTQTIEAALGLTGIEG--TFRANCEAVVSVLRKNKDILLMLLEVFV 507
              P +L + +   +G T  E    FR  C      LR+  +++L L  + V
Sbjct: 508 LPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMV 559

>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* Length = 696

 Score = 80.7 bits (198), Expect = 3e-15
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 368 VKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLK--LKRYSESVAAMSMVGHILGLGDR 425
           V    + +++                +          +  Y +S A   ++ ++LG+GDR
Sbjct: 494 VDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDR 553

Query: 426 HLDNILLDFSSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEG--TFRA 483
           HLDN+LL  ++G + HID+     +  +   P   P +L++ +  A+G    E    FR 
Sbjct: 554 HLDNLLLT-TNGKLFHIDFGYILGRDPK---PMPPPMKLSKEMVEAMGGISSEHHHEFRK 609

Query: 484 NCEAVVSVLRKNKDILLMLLEVFV 507
            C      LR++ +++L L  + V
Sbjct: 610 QCYTAYLHLRRHANVMLNLFSLMV 633

>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A Length = 1091

 Score = 74.9 bits (183), Expect = 2e-13
 Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 11/176 (6%)

Query: 341  MFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFS 400
            M     +      G+  V+        ++ K  L    +     LHQ +       + + 
Sbjct: 856  MLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKD-KNKGEIYD 914

Query: 401  LKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCF--DKGQRLKVPE 458
              +  ++ S A   +   ILG+GDRH  NI++    G + HID+       K +     E
Sbjct: 915  AAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DDGQLFHIDFGHFLDHKKKKFGYKRE 973

Query: 459  IVPFRLTQTIEAALGLTGIEGT-------FRANCEAVVSVLRKNKDILLMLLEVFV 507
             VPF LTQ     +     E T       F+  C      +R++ ++ + L  + +
Sbjct: 974  RVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMML 1029

>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Length = 940

 Score = 74.5 bits (182), Expect = 3e-13
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 8/118 (6%)

Query: 394 EGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQR 453
              +A    ++ ++ S A   +  ++LG+GDRH DNI++   SG + HID+       + 
Sbjct: 759 NPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQLFHIDFGHFLGNFKT 817

Query: 454 LKVP--EIVPFRLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLE 504
                 E VPF LT      +       +     FR  CE   ++LR++  + L L  
Sbjct: 818 KFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFA 875

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.8 bits (175), Expect = 2e-12
 Identities = 87/576 (15%), Positives = 171/576 (29%), Gaps = 186/576 (32%)

Query: 874  GKQDENKEKLLSVLNVAVTHLYDEVKCR-VLD----IFSDSAGGIK-----GNNRMQLD- 922
            G+     + +LSV   A    +D   C+ V D    I S     I       +       
Sbjct: 12   GEHQYQYKDILSVFEDAFVDNFD---CKDVQDMPKSILSKEE--IDHIIMSKDAVSGTLR 66

Query: 923  -FGTLFCEFDEQVEKCILVAGFVNELWQSIGRDMYDNDADIECPNYHFERNWASIFKTSL 981
             F TL  + +E V+K      FV E+ +                NY F    + I     
Sbjct: 67   LFWTLLSKQEEMVQK------FVEEVLR---------------INYKFL--MSPI----- 98

Query: 982  LACKTLVGQMTEVVLPDVMRSTISFNSEVMDAFGLVSQIRGSIDTTLEQLVEVELERASL 1041
                      TE   P     T  +  +    +   +Q+    + +  Q    +L R +L
Sbjct: 99   ---------KTEQRQPS--MMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPYL-KL-RQAL 144

Query: 1042 VELEQSYFVKV-GL--ITEQQLALE---EAAVKGR--DHLSW-------EEAEELASQEE 1086
            +EL  +  V + G+    +  +AL+      V+ +    + W            L   ++
Sbjct: 145  LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204

Query: 1087 ACKAELNELHQTWNQRDMRSSSLMKQEADIRNA---LVSSERHFQSVISAEEFREPHIL- 1142
                   ++   W  R   SS++  +   I+     L+ S+ +   ++     +      
Sbjct: 205  LL----YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 1143 ------------RSKALLAILV-----KPFMELESV----DKTLASFCESVGSIPYGTPK 1181
                        R K +   L         ++  S+    D+  +   + +   P   P+
Sbjct: 261  AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 1182 LADLINS------GRSISE--CIWNFGSLSNGHSFFIWKMGIIDSFLDSCVHDVAASVDQ 1233
                 N         SI +    W+            WK                     
Sbjct: 321  EVLTTNPRRLSIIAESIRDGLATWDN-----------WK--------------------- 348

Query: 1234 NLGFDQLFNVVKKKLEVQ-LQEHVGLYLKERVAPIILAFLDKEIEHLKKLTESTKELTAD 1292
            ++  D+L  +++  L V    E+  ++ +       L+           +      L   
Sbjct: 349  HVNCDKLTTIIESSLNVLEPAEYRKMFDR-------LSVFPPSA----HIPTILLSLIWF 397

Query: 1293 DAKKDTGAVRRVQLMLAEYCNAHETARAARSAASLMKRQVNEFREALH----KTSLEIVQ 1348
            D  K       V +++ +               SL+++Q  E   ++     +  +++  
Sbjct: 398  DVIKSD-----VMVVVNKLHKY-----------SLVEKQPKESTISIPSIYLELKVKLEN 441

Query: 1349 MEWMHDATLTPSYNSRITFQKYFSSDD------DIY 1378
               +H + +   YN      K F SDD      D Y
Sbjct: 442  EYALHRSIVD-HYN----IPKTFDSDDLIPPYLDQY 472

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 69.1 bits (168), Expect = 1e-11
 Identities = 104/695 (14%), Positives = 199/695 (28%), Gaps = 232/695 (33%)

Query: 131 PETPHEIWFHEEFGEQLKSA-----------ILNFKTPPASAAALGDVWRP-FDNIAASL 178
            + P  I   EE    + S             L  K        + +V R  +  + + +
Sbjct: 39  QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98

Query: 179 ASHQRKSSVSLSEVAPQLSLLSSSDVPMPGFEK-QVATSESDGGLTATLRGIVTIASFSE 237
            + QR+ S+       Q   L + +     F K  V+  +    L   L           
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQV---FAKYNVSRLQPYLKLRQALL---------- 145

Query: 238 EVSILSTKTKPKKLVILGQML------LQAVNSFLRSSPATRSHSLGIRYYSVTPISGRA 291
                  + +P K V++  +L      +        S          I  +         
Sbjct: 146 -------ELRPAKNVLIDGVLGSGKTWV--ALDVCLSYKVQCKMDFKI--F--------- 185

Query: 292 GLIQWVD--NVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPA 349
               W++  N  S  +V +  Q    L Q        +  S    +           I +
Sbjct: 186 ----WLNLKNCNSPETVLEMLQKL--LYQIDPNWTSRSDHSSNIKLR----------IHS 229

Query: 350 LKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLK----- 404
           ++ + +RR++  + + +      LL L       + + + W       AF+L  K     
Sbjct: 230 IQAE-LRRLLKSKPYEN-----CLLVL-----LNVQNAKAW------NAFNLSCKILLTT 272

Query: 405 RYSESVAA---------MSMVGHILGLGDRHLDNIL---LDFSSGD-------------- 438
           R+   V           +S+  H + L    + ++L   LD    D              
Sbjct: 273 RFK-QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331

Query: 439 ---------IVHIDY--NVCFDKGQRLKVPEIVPFRLTQTIEAAL-GLTGIEGTFRANCE 486
                    +   D   +V  DK             LT  IE++L  L   E  +R   +
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDK-------------LTTIIESSLNVLEPAE--YRKMFD 376

Query: 487 AVVSVLRKNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASRV 546
            + SV   +  I  +LL +        W      D   +       +      SL   + 
Sbjct: 377 RL-SVFPPSAHIPTILLSLI-------WFDVIKSDVMVV-------VNKLHKYSLVEKQP 421

Query: 547 QEIRVPLQEHHDLLLATLPAVE--LALERFADVLSQYELASAL-------------FYRA 591
           +E  + +     + L     +E   AL R   ++  Y +                 FY  
Sbjct: 422 KESTISI---PSIYLELKVKLENEYALHR--SIVDHYNIPKTFDSDDLIPPYLDQYFY-- 474

Query: 592 DQERSNLVLHETSTKSMVAEANCNAEKIRASFE---VQAREFAQAKAVVTEKAQEATTWM 648
               S++  H       +     + E++   F    +  R F + K      A  A+   
Sbjct: 475 ----SHIGHH-------LKNIE-HPERM-TLFRMVFLDFR-FLEQKIRHDSTAWNAS--- 517

Query: 649 EQHGRILDAL------RGNLIPEINSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQ 702
              G IL+ L      +  +        +L  ++  F               +P+  +  
Sbjct: 518 ---GSILNTLQQLKFYKPYICDNDPKYERLVNAILDF---------------LPKIEENL 559

Query: 703 CHDIDKDVSQLIAELDHGLSSVFIALQAYSLALQR 737
                 D+ ++    +       I  +A+   +QR
Sbjct: 560 ICSKYTDLLRIALMAEDE----AIFEEAHK-QVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 68.7 bits (167), Expect = 2e-11
 Identities = 88/694 (12%), Positives = 187/694 (26%), Gaps = 179/694 (25%)

Query: 1091 ELNELHQTWNQRDMRSSSL--MKQEADIRNALVSSERHFQSVISAEEF----REPH-ILR 1143
            E  E    +  +D+ S          D ++     +   +S++S EE          +  
Sbjct: 10   ETGEHQYQY--KDILSVFEDAFVDNFDCKDV----QDMPKSILSKEEIDHIIMSKDAVSG 63

Query: 1144 SKALLAILVKPFMELESVDKTLASFCESVGSIPYGTPKLADLINSGRSISECIWNFGSLS 1203
            +  L   L      L   ++ +  F E V  I Y    L   I +     E        S
Sbjct: 64   TLRLFWTL------LSKQEEMVQKFVEEVLRINYKF--LMSPIKT-----EQR----QPS 106

Query: 1204 NGHSFFIWKMGIIDSFLDSCVHDVAASVDQNLGFDQLFNVVKKKLEVQLQEHVGLYL--- 1260
                 +I          D   +D       N+   Q +  +++ L  +L+    + +   
Sbjct: 107  MMTRMYI-------EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL-ELRPAKNVLIDGV 158

Query: 1261 ----KERVAPIILAFLDKEIEHLKK-----LTESTKELTADDAKKDTGAVRRVQLMLAEY 1311
                K  VA  +   L  +++         L            +     + ++       
Sbjct: 159  LGSGKTWVA--LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 1312 CNAHETARAARSAASLMKRQVNEFREALHKTSLEI---VQMEWMHDA------TLTPSYN 1362
             +     +      S+        +   ++  L +   VQ     +A       L  +  
Sbjct: 217  SDHSSNIK--LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF 274

Query: 1363 SRITFQ------KYFSSDDDIYPIILNLSRPKLLETLQSSVTKIARSVESL--QACERSS 1414
             ++T         + S D         L+  ++   L           + L  +    + 
Sbjct: 275  KQVTDFLSAATTTHISLDHHSMT----LTPDEVKS-LLLKYLDC--RPQDLPREVLTTNP 327

Query: 1415 LTAEGQLERAMGWACGGPNSSAAGNSSTKTSGIPPEFHDHLMRRRQLLWEAREKASKIVN 1474
                                          S I     D L           +K + I+ 
Sbjct: 328  RR---------------------------LSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

Query: 1475 ICMSVLDFEASRD-----GVFRTPGEVY-PARVGVDARSWQQVYLNAVTKLEVAYHSFTC 1528
              ++VL+    R       VF  P   + P    + +  W  V  + V  +    H ++ 
Sbjct: 361  SSLNVLEPAEYRKMFDRLSVF--PPSAHIPT--ILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 1529 AEQEWKLAQSSMEAASNGLYSATNELCIASLKAKSAS-GDLQSTVLTMRDCAYEASAALT 1587
             E++ K +  S+      +Y          LK K  +   L  +++      Y       
Sbjct: 417  VEKQPKESTISI----PSIYL--------ELKVKLENEYALHRSIVD----HYNIPKTFD 460

Query: 1588 AFGRVSRV-----------H--TALTSESGSMLEEVLAITEDL--------HDVHSLGKE 1626
            +   +              H       E  ++   V     D         HD  +    
Sbjct: 461  SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL---DFRFLEQKIRHDSTAWNAS 517

Query: 1627 AAAINHSLMEDLSKANAVLLPLDSVLSKDVAAMSDAITSERETKMEVSPIHGQAIYQSYC 1686
             + +N   ++ L      +   D    + V A+           ++  P   + +  S  
Sbjct: 518  GSILN--TLQQLKFYKPYICDNDPKYERLVNAI-----------LDFLPKIEENLICSKY 564

Query: 1687 LRVRDACQLLKPLLPSLMSSVKGLYSMLTR-LAR 1719
                D  ++      +LM+  + ++    + + R
Sbjct: 565  T---DLLRI------ALMAEDEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.8 bits (162), Expect = 7e-11
 Identities = 93/676 (13%), Positives = 186/676 (27%), Gaps = 206/676 (30%)

Query: 226 LRGIVTIASFSEEVS-ILSTKTKPKKLVILGQMLL----QAVNSFLRSSPATRSHSLGIR 280
            + I++     EE+  I+ +K      + L   LL    + V  F+          L I 
Sbjct: 42  PKSILS----KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV-------LRIN 90

Query: 281 Y-YSVTPISGRAGLIQWVDNVIS-IYSVFKSWQHRAQLAQFSAIGAGNAKSSVPP-PVPR 337
           Y + ++PI       +      S +  ++   + R            N         V R
Sbjct: 91  YKFLMSPI-------KTEQRQPSMMTRMYIEQRDRLY----------NDNQVFAKYNVSR 133

Query: 338 PSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFK 397
                Y K+  AL E  +R        P    + VL+D +    +  +      A +   
Sbjct: 134 LQP--YLKLRQALLE--LR--------PA---KNVLIDGVLGSGKTWV------ALDVCL 172

Query: 398 AFSLKLKRYSESVAAMSMVGHI--LGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLK 455
           ++ ++ K          M   I  L L + +    +L+     +  ID N       R  
Sbjct: 173 SYKVQCK----------MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT----SRSD 218

Query: 456 VPEIVPFRLTQTIEAALGLTGIEGTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEW- 514
               +  R+         L       +          +  ++ LL+LL V   +    W 
Sbjct: 219 HSSNIKLRIHSIQAELRRL------LK---------SKPYENCLLVLLNV--QNAKA-WN 260

Query: 515 -----------TRGDFHDDAAIGG--------EERKGMELAVSLSLFAS----RVQEIRV 551
                      TR     D                  +      SL       R Q++  
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 552 PLQEHHDLLLATLPAVELALERFADVLSQYELASALFYRADQERSNLVLHETSTKSMVAE 611
            +   +   L+ +     ++         ++         D+      L      S+   
Sbjct: 321 EVLTTNPRRLSIIAE---SIRDGLATWDNWK-----HVNCDK------LTTIIESSL--- 363

Query: 612 ANCNAEKIRASFEVQAREFA--QAKAVVTEKAQEATTWMEQHGRILDALRGNLIPE---- 665
                 + R  F+      +     A +                +L  +  ++I      
Sbjct: 364 NVLEPAEYRKMFD----RLSVFPPSAHIPTI-------------LLSLIWFDVIKSDVMV 406

Query: 666 -INSCIKLSGSMDAFSLTSAVLVAGVPFSIVPEPTQVQCHDIDKDVSQLIAELD--HGLS 722
            +N   K S            LV   P     + + +    I  ++   +      H   
Sbjct: 407 VVNKLHKYS------------LVEKQP-----KESTISIPSIYLELKVKLENEYALHR-- 447

Query: 723 SVFIALQAYSLALQRILPLNYLTTTAVHG-WAQVL--QLSANAPSVDILSLARR------ 773
                +  Y++   +    + L    +   +   +   L  N    + ++L R       
Sbjct: 448 ---SIVDHYNI--PKTFDSDDLIPPYLDQYFYSHIGHHLK-NIEHPERMTLFRMVFLDFR 501

Query: 774 --QATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEIEKVEKECAELVNSI-----GSET 826
             +     +R      ++     + L  +++ Y   I   + +   LVN+I       E 
Sbjct: 502 FLEQK---IRHDSTAWNASGSILNTL-QQLKFYKPYICDNDPKYERLVNAILDFLPKIEE 557

Query: 827 ---ESKAKDRFLLAFM 839
               SK  D   +A M
Sbjct: 558 NLICSKYTDLLRIALM 573

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.7 bits (141), Expect = 2e-08
 Identities = 100/660 (15%), Positives = 197/660 (29%), Gaps = 179/660 (27%)

Query: 494  KNKDILLMLLEVFVWDPLIEWTRGDFHDDAAIGGEERKGMELAVSLSLFASR-VQEIRVP 552
            + KDIL +  + FV +        D  D   +    +         S+ +   +  I   
Sbjct: 17   QYKDILSVFEDAFVDNF-------DCKD---VQDMPK---------SILSKEEIDHI--- 54

Query: 553  LQEHHD-----LLLATLPAV-ELALERF-ADVLSQ-YE-LASALFYRADQERSNLVLHET 603
            +           L  TL +  E  +++F  +VL   Y+ L S +     Q      ++  
Sbjct: 55   IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114

Query: 604  STKSMVAEANCNAEKIRASFEVQAREFAQAKAVVTEKAQEATTWMEQHGRILDALRGNLI 663
                +      N  ++ A + V  R                    + + ++  AL   L 
Sbjct: 115  QRDRL-----YNDNQVFAKYNVS-RL-------------------QPYLKLRQALL-ELR 148

Query: 664  PEINSCIKLSGSMDAF---SLTSAVL-----VAGVPFSI-------------VPEPTQVQ 702
            P  N  + + G +       +   V         + F I             V E  Q  
Sbjct: 149  PAKN--VLIDG-VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205

Query: 703  CHDIDKDVSQL----------IAELDHGLSSVFIALQAYSLALQRILPL----NYLTTTA 748
             + ID + +            I  +   L    +  + Y   L   L L    N     A
Sbjct: 206  LYQIDPNWTSRSDHSSNIKLRIHSIQAELRR-LLKSKPYENCL---LVLLNVQNAKAWNA 261

Query: 749  VHGWAQVLQLSANAPSVDILSLARRQATELIVRIHGDNHDSIKQNHDDLRLKVEKYGVEI 808
             +   ++L  +      D LS A      L         D +K     L LK        
Sbjct: 262  FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK----SLLLKY--LDCRP 315

Query: 809  EKVEKE---CAELVNSIGSETESKAKDRFLLAFMKYMKSAGLVRKEDV-SSSYQSGQLKN 864
            + + +E         SI +E+       +        K     +   +  SS     L+ 
Sbjct: 316  QDLPREVLTTNPRRLSIIAESIRDGLATW-----DNWKHVNCDKLTTIIESSLN--VLEP 368

Query: 865  DGRKD-----AGLRGKQDEN-KEKLLSVLNVAVTHLYDEVKCRVLDIFSDSAGGIKGNNR 918
               +      +        +    LLS++   V     +V   V++     +   K    
Sbjct: 369  AEYRKMFDRLSVFP--PSAHIPTILLSLIWFDVI--KSDVM-VVVNKLHKYSLVEKQPKE 423

Query: 919  MQLDFGTLFCEFDEQVEKCILVAGFVNELWQSI-----GRDMYDNDADIECPN------- 966
              +   +++ E   ++E           L +SI         +D+D D+  P        
Sbjct: 424  STISIPSIYLELKVKLEN-------EYALHRSIVDHYNIPKTFDSD-DLIPPYLDQYFYS 475

Query: 967  ---YHF------ERNWASIFKTSLLACKTLVGQMTEVVLPDVMRSTISFN--SEVMDAFG 1015
               +H       ER   ++F+   L  + L  +        +   + ++N    +++   
Sbjct: 476  HIGHHLKNIEHPER--MTLFRMVFLDFRFLEQK--------IRHDSTAWNASGSILNTLQ 525

Query: 1016 LVSQIRGSI---DTTLEQLVEVELER------ASLVELEQSYFVKVGLITEQQLALEEAA 1066
             +   +  I   D   E+LV   +         +L+  + +  +++ L+ E +   EEA 
Sbjct: 526  QLKFYKPYICDNDPKYERLVN-AILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584

>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 1092

 Score = 71.5 bits (174), Expect = 2e-12
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 8/170 (4%)

Query: 345  KIIPALKEKGIRRVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLK 404
              +      G+  V+S  +   D++             +                   ++
Sbjct: 862  GCLATGDRSGLIEVVSTSETIADIQLNSSNVAATAAFNKDALLNWLKEYNSGDDLDRAIE 921

Query: 405  RYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHIDYNVCFDKGQRLKVP--EIVPF 462
             ++ S A   +  ++LG+GDRH DNI++   +G + HID+       +       E VPF
Sbjct: 922  EFTLSCAGYCVASYVLGIGDRHSDNIMVK-KTGQLFHIDFGHILGNFKSKFGIKRERVPF 980

Query: 463  RLTQTIEAALGLTGIEGT-----FRANCEAVVSVLRKNKDILLMLLEVFV 507
             LT      +       T     FR  CE    +LR++ ++ + L  + +
Sbjct: 981  ILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALML 1030

>1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A Length = 33

 Score = 61.1 bits (149), Expect = 5e-12
 Identities = 16/30 (53%), Positives = 22/30 (73%)

Query: 1959 LSIAEQVDHLLKQATSVDNLCNMYEGWTPW 1988
            L + EQVD L++QATS++ LC  Y GW P+
Sbjct: 3    LDVPEQVDKLIQQATSIERLCQHYIGWCPF 32

>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens} Length = 126

 Score = 51.8 bits (124), Expect = 7e-08
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 31/111 (27%)

Query: 40  YPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQS 99
            P           EL  + +LW E+W   L               EEA+R+         
Sbjct: 14  IPTTENLYFQGAMELIRVPILWHEMWHEGL---------------EEASRL-------YF 51

Query: 100 EKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHEIWFHEEFGEQLKSA 150
            ++ +           +   LE   A   R P+T  E  F++ +G  L  A
Sbjct: 52  GERNVKG---------MFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEA 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	1989
2x6h_A	696	GH13170P, VPS34, phosphotidylinositol 3 kinase 59F	100.0
1e7u_A	961	Phosphatidylinositol 3-kinase catalytic subunit; p	100.0
2wxf_A	940	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	100.0
2y3a_A	1092	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	100.0
3ls8_A	614	Phosphatidylinositol 3-kinase catalytic subunit ty	100.0
3hhm_A	1091	Phosphatidylinositol-4,5-bisphosphate 3-kinase cat	100.0
1w1n_A	33	Phosphatidylinositol 3-kinase TOR1; target of rapa	99.51
2npu_A	126	FKBP12-rapamycin complex-associated protein; four-	99.48
3fap_B	94	FRAP, FKBP12-rapamycin associated protein; complex	99.32
1w1n_A	33	Phosphatidylinositol 3-kinase TOR1; target of rapa	89.63

>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*

Probab=100.00  E-value=3.3e-44  Score=450.06  Aligned_cols=208  Identities=24%  Similarity=0.411  Sum_probs=181.4

Q ss_pred             CcEEEEEEec-eeEEecCCCCceEEEEEcH-----------------------HHHHHHHHHHhcCCccCCCccceecce
Q 037207          228 GIVTIASFSE-EVSILSTKTKPKKLVILGQ-----------------------MLLQAVNSFLRSSPATRSHSLGIRYYS  283 (1989)
Q Consensus       228 ~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS-----------------------QLFrLINsLL~kdkETRRR~L~IrtYs  283 (1989)
                      +.++|.+|.+ .+.|++|+++||||+|+|+                       |||++||.+|.++    +++|.+++|.
T Consensus       405 p~v~I~~~~~~~~~V~~S~~~P~~l~~~gsD~G~~y~~i~K~gDDLRQD~rv~Ql~~lmn~il~~~----~~~L~i~~Y~  480 (696)
T 2x6h_A          405 PEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRE----NLDLKLTPYK  480 (696)
T ss_dssp             TTSEEEEECGGGCEECSSSSCCEEEEEEETTTTCEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHT----TCCCCCCCCC
T ss_pred             CCeEEEEEecCeEEEcccccCCeEEEEEecCCCCceeEEEecCcccchhHHHHHHHHHHHHHHHhC----CCCcEEeccE
Confidence            3489999996 6999999999999999986                       9999999999987    4799999999


Q ss_pred             eeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCCC
Q 037207          284 VTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRD  363 (1989)
Q Consensus       284 VIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~d  363 (1989)
                      |||+++++||||||++ .||++|++.|..                          ...|                     
T Consensus       481 Vipls~~~GLIE~V~s-~tl~~i~~~~~~--------------------------l~~~---------------------  512 (696)
T 2x6h_A          481 VLATSSKHGFLQYVDS-CTVAEVLAREGN--------------------------IHNF---------------------  512 (696)
T ss_dssp             EEESSTTCEEEECCCC-EEHHHHHHHSSS--------------------------HHHH---------------------
T ss_pred             EEeccCCCCeeeeCCC-ccHHHHHHhcCh--------------------------HHHH---------------------
Confidence            9999999999999975 799999975410                          0001                     


Q ss_pred             CChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHH----HHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcE
Q 037207          364 WPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAF----SLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDI  439 (1989)
Q Consensus       364 wp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w----~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeV  439 (1989)
                                               |....+++..|    ..+|++|++|+|+|||+|||||||||||+||||| .||+|
T Consensus       513 -------------------------f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGlGDRH~~NILid-~tG~v  566 (696)
T 2x6h_A          513 -------------------------FRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLLLT-TNGKL  566 (696)
T ss_dssp             -------------------------HHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEEC-TTSCE
T ss_pred             -------------------------HHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccCCCCCCcceEEe-CCCCE
Confidence                                     11111122222    2578999999999999999999999999999999 69999


Q ss_pred             EEEecccccccCCCCcCCCcCCccccHHHHHHhccCCccc--hHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          440 VHIDYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEG--TFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       440 VHIDFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVEG--~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      ||||||+||+.+   +.||+|||||||||+++||+.|++|  .|+.+|+.++++||+|++.|+++|++|++||+.+|..
T Consensus       567 ~HIDFG~~f~~~---p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~~~~~~LR~~~~~il~ll~lml~~~lp~~~~  642 (696)
T 2x6h_A          567 FHIDFGYILGRD---PKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMVDATVPDIAL  642 (696)
T ss_dssp             EECCCCSCTTCC---SSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTCCCTTTTS
T ss_pred             EEEeehhhhccC---CCCcCCCeecCHHHHHHhCCCCcccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHcCCCCcccc
Confidence            999999999887   4699999999999999999999998  5999999999999999999999999999999999974

>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*

Probab=100.00  E-value=1.8e-43  Score=455.68  Aligned_cols=224  Identities=22%  Similarity=0.353  Sum_probs=185.1

Q ss_pred             CCCcEEEEEEe-ceeEEecCCCCceEEEEEcH-------------------------HHHHHHHHHHhcCCccCCCccce
Q 037207          226 LRGIVTIASFS-EEVSILSTKTKPKKLVILGQ-------------------------MLLQAVNSFLRSSPATRSHSLGI  279 (1989)
Q Consensus       226 ~~~~VrI~rF~-p~V~VL~SKqrPRRLtI~GS-------------------------QLFrLINsLL~kdkETRRR~L~I  279 (1989)
                      .++.++|.+|. +.+.|++|+++||||+|+|+                         |||++||.+|.++    +++|.+
T Consensus       631 ~~P~~~I~~~~~~~~~V~~S~~~P~~l~~~gsD~~~G~~~~~i~K~gDDLRqD~rv~Ql~~lmn~il~~~----~~~L~i  706 (940)
T 2wxf_A          631 LDPSTLLEEVCVEQCTFMDSKMKPLWIMYSSEEAGSAGNVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQE----GLDLRM  706 (940)
T ss_dssp             TEEEEEECEECGGGCEECSSTTCCEEEEEECTTTGGGGCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHT----TCCCCC
T ss_pred             CCCceeEEEeccCceEEcccccCCeEEEEEecCcCCCcceeEEEecCcccchhHHHHHHHHHHHHHHHhC----CCCeEE
Confidence            34679999999 58999999999999999963                         9999999999987    579999


Q ss_pred             ecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccc
Q 037207          280 RYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVI  359 (1989)
Q Consensus       280 rtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~  359 (1989)
                      ++|.|||+++++||||||+|+.||++|++...              +..   ..                    +     
T Consensus       707 ~~Y~Vipls~~~GlIE~V~ns~tl~~I~~~~~--------------~~~---~~--------------------~-----  744 (940)
T 2wxf_A          707 TPYGCLPTGDRTGLIEVVLHSDTIANIQLNKS--------------NMA---AT--------------------A-----  744 (940)
T ss_dssp             CCCCEEEEETTEEEEECCSSEEEHHHHHTCCS--------------SST---TC--------------------C-----
T ss_pred             EeeeEEEecCCCCeEeECCCCccHHHHHHhhc--------------cch---hh--------------------h-----
Confidence            99999999999999999999999999975310              000   00                    0     


Q ss_pred             cCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcE
Q 037207          360 SRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDI  439 (1989)
Q Consensus       360 sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeV  439 (1989)
                                         ..+++.|++|+...++ .+.|+.+|++|++|+|+|||+|||||||||||+||||| .||+|
T Consensus       745 -------------------~f~~~~l~~~~~~~~~-~~~~~~a~~~F~~S~A~~Svv~YILGlgDRH~~NILid-~tG~v  803 (940)
T 2wxf_A          745 -------------------AFNKDALLNWLKSKNP-GEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIR-ESGQL  803 (940)
T ss_dssp             -------------------SSGGGHHHHHHHHHSC-TTHHHHHHHHHHHHHHHHHHHHHHHTCCCCCGGGEEEE-TTSCE
T ss_pred             -------------------ccCchhHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccEEEe-cCCCE
Confidence                               0112234555554553 35666788899999999999999999999999999999 59999


Q ss_pred             EEEecccccccC-CCCcC-CCcCCccccHHHHHHhccC--Ccc---chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCc
Q 037207          440 VHIDYNVCFDKG-QRLKV-PEIVPFRLTQTIEAALGLT--GIE---GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLI  512 (1989)
Q Consensus       440 VHIDFG~cFekG-krL~v-PE~VPFRLTrNIv~ALGpt--GVE---G~FRssceatmr~LRknkd~LlsLLEaFVrDPLv  512 (1989)
                      +|||||+||+.+ +.+.+ ||+|||||||||+++||+.  |.+   |.|+.+|+.++++||+|++.|+++|++|++|||.
T Consensus       804 ~HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~~g~Fr~~c~~~~~~LR~~~~~ll~ll~lml~~~lp  883 (940)
T 2wxf_A          804 FHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAAGLP  883 (940)
T ss_dssp             EECCCCCCTTCC---------CCCCCCCHHHHHHHTTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHGGGCCT
T ss_pred             EEEeehhhhcccccccCCCCCCCCccCCHHHHHHHcCCCCCCCcchhhHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCc
Confidence            999999999986 45665 9999999999999999874  444   8999999999999999999999999999999999


Q ss_pred             cccc
Q 037207          513 EWTR  516 (1989)
Q Consensus       513 dW~~  516 (1989)
                      +|..
T Consensus       884 ~~~~  887 (940)
T 2wxf_A          884 ELSC  887 (940)
T ss_dssp             TSCS
T ss_pred             ccCc
Confidence            9974

>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=100.00  E-value=2.2e-43  Score=458.40  Aligned_cols=224  Identities=22%  Similarity=0.364  Sum_probs=190.1

Q ss_pred             CCCcEEEEEEec-eeEEecCCCCceEEEEEcH------------------------HHHHHHHHHHhcCCccCCCcccee
Q 037207          226 LRGIVTIASFSE-EVSILSTKTKPKKLVILGQ------------------------MLLQAVNSFLRSSPATRSHSLGIR  280 (1989)
Q Consensus       226 ~~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS------------------------QLFrLINsLL~kdkETRRR~L~Ir  280 (1989)
                      .++.++|.+|.+ .+.|++|+++||||+|+|+                        |||++||.+|.++    +++|.++
T Consensus       784 ~~P~v~I~~~~~~~~~V~~S~~~P~rL~~~gsD~~G~~y~~L~K~gDDLRQD~rv~Ql~~lmn~ll~~~----~~~L~i~  859 (1092)
T 2y3a_A          784 LNPCVILSELYVEKCKYMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEA----GLDLRML  859 (1092)
T ss_dssp             SCSSBCCCCCCGGGCEECSSTTCCEEEEEECTTTSSSEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH----SCCCCCC
T ss_pred             CCCceEEEEEecCceEEeccccCceEEEEEecCCCCceeeEEEecCcccchhHHHHHHHHHHHHHHHhC----CCCeEEe
Confidence            457799999995 8999999999999999985                        9999999999986    5799999


Q ss_pred             cceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccccccc
Q 037207          281 YYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVIS  360 (1989)
Q Consensus       281 tYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~s  360 (1989)
                      +|.|||+++++||||||+|+.||++|++....              ..   .                    .+      
T Consensus       860 ~Y~Vipls~~~GLIE~V~ns~TL~~I~~~~~~--------------~~---~--------------------~~------  896 (1092)
T 2y3a_A          860 PYGCLATGDRSGLIEVVSTSETIADIQLNSSN--------------VA---A--------------------TA------  896 (1092)
T ss_dssp             CCCEECCSSSCCEEECCTTCCBHHHHHSSSCT--------------TT---T--------------------TS------
T ss_pred             cceEEEecCCCCeEeeCCCCccHHHHHHhhcc--------------ch---h--------------------hh------
Confidence            99999999999999999999999998753100              00   0                    00      


Q ss_pred             CCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEE
Q 037207          361 RRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIV  440 (1989)
Q Consensus       361 R~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVV  440 (1989)
                        .                .+++.|++|+...+ +.+.|+.+|++|++|+|+|||+|||||||||||+||||| .||+||
T Consensus       897 --~----------------f~~~~L~~~~~~~~-~~~~~~~ar~nF~~SlA~ySvv~YILGlGDRH~~NILid-~tG~v~  956 (1092)
T 2y3a_A          897 --A----------------FNKDALLNWLKEYN-SGDDLDRAIEEFTLSCAGYCVASYVLGIGDRHSDNIMVK-KTGQLF  956 (1092)
T ss_dssp             --C----------------SSTTHHHHHHHHHC-CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCTTTEEEC-TTSCEE
T ss_pred             --c----------------cCchHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEe-cCCCEE
Confidence              0                01123445554444 335677888999999999999999999999999999999 599999


Q ss_pred             EEecccccccC-CCCcC-CCcCCccccHHHHHHhccC--Ccc---chHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCcc
Q 037207          441 HIDYNVCFDKG-QRLKV-PEIVPFRLTQTIEAALGLT--GIE---GTFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIE  513 (1989)
Q Consensus       441 HIDFG~cFekG-krL~v-PE~VPFRLTrNIv~ALGpt--GVE---G~FRssceatmr~LRknkd~LlsLLEaFVrDPLvd  513 (1989)
                      |||||+||+.+ +.+.+ ||+|||||||||+++||++  |.+   |.|+.+|+.++++||+|++.|+++|++|++|||.+
T Consensus       957 HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~fg~Fr~~c~~a~~~LR~~~~~Il~ll~lml~~~Lp~ 1036 (1092)
T 2y3a_A          957 HIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALMLTAGLPE 1036 (1092)
T ss_dssp             ECCCSCCSSCCCCGGGCCCCCCCCCCCHHHHHHHHTTCSSCSSSTTHHHHHHHHHHHHHHHTHHHHHHHHHHTSTTCCSS
T ss_pred             EEeehhhhhcCCccCCCCCCCCCccCCHHHHHHHccCCCCCCcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCCcc
Confidence            99999999986 45555 9999999999999999864  454   99999999999999999999999999999999999


Q ss_pred             ccc
Q 037207          514 WTR  516 (1989)
Q Consensus       514 W~~  516 (1989)
                      |..
T Consensus      1037 ~~~ 1039 (1092)
T 2y3a_A         1037 LTS 1039 (1092)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            974

>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A

Probab=100.00  E-value=8.5e-43  Score=431.72  Aligned_cols=214  Identities=23%  Similarity=0.420  Sum_probs=181.1

Q ss_pred             CCCcEEEEEEec-eeEEecCCCCceEEEEEcH----------------------HHHHHHHHHHhcCCccCCCccceecc
Q 037207          226 LRGIVTIASFSE-EVSILSTKTKPKKLVILGQ----------------------MLLQAVNSFLRSSPATRSHSLGIRYY  282 (1989)
Q Consensus       226 ~~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS----------------------QLFrLINsLL~kdkETRRR~L~IrtY  282 (1989)
                      .++.|+|.+|.| .+.|++|+++||||+|+|+                      |||++||.+|.++    +++|.+++|
T Consensus       330 l~P~v~I~~i~p~~~~V~~Sk~~P~~l~~~gsDG~~y~~i~K~gDDLRQD~~~~Ql~~l~n~il~~~----~ldL~i~~Y  405 (614)
T 3ls8_A          330 LEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKE----NLDLKLTPY  405 (614)
T ss_dssp             TEEEEEEEEECGGGCEECSSTTCCEEEEEEETTSCEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHT----TCCCCCCCC
T ss_pred             CCCceEEEEEecCeeEEeecccCeEEEEEEccCCCEEEEEEecCCcchHHHHHHHHHHHHHHHHHhc----CCCceeecc
Confidence            346799999997 7999999999999999997                      9999999999986    478999999


Q ss_pred             eeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhcccccccCC
Q 037207          283 SVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIRRVISRR  362 (1989)
Q Consensus       283 sVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~~v~sR~  362 (1989)
                      .|||+|+++||||||++ +|+.++++...                          ....|+.+                 
T Consensus       406 ~Vipls~~~GlIE~V~~-~tl~~il~~~~--------------------------~l~~~f~~-----------------  441 (614)
T 3ls8_A          406 KVLATSTKHGFMQFIQS-VPVAEVLDTEG--------------------------SIQNFFRK-----------------  441 (614)
T ss_dssp             CEEESSSSEEEEECCCC-EEHHHHHHHTS--------------------------SHHHHHHH-----------------
T ss_pred             EEEEecCCCceEEEeCC-ccHHHHHHccC--------------------------hHHHHHHH-----------------
Confidence            99999999999999997 58888875310                          00001110                 


Q ss_pred             CCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCCCcEEEE
Q 037207          363 DWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSSGDIVHI  442 (1989)
Q Consensus       363 dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~TGeVVHI  442 (1989)
                                      ..|...         ..+..++..|++|++|+|+|||+|||||||||||+||||| .||+||||
T Consensus       442 ----------------~~~~~~---------~~~~~~~~a~~nF~~S~A~ySvv~YILGigDRH~~NILld-~tG~v~HI  495 (614)
T 3ls8_A          442 ----------------YAPSEN---------GPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHI  495 (614)
T ss_dssp             ----------------HSBCTT---------SGGGBCHHHHHHHHHHHHHHHHHHHHHTCCCCCTTSEEEC-TTSCEEEC
T ss_pred             ----------------hCCCcc---------ccccccHHHHHHHHHHHHHHhHhheeeeccCCCCcceeEc-CCCCEeee
Confidence                            011100         0001124578999999999999999999999999999999 79999999


Q ss_pred             ecccccccCCCCcCCCcCCccccHHHHHHhccCCccc--hHHHHHHHHHHHHhhChhHHHHHHHHHhhCCCccccc
Q 037207          443 DYNVCFDKGQRLKVPEIVPFRLTQTIEAALGLTGIEG--TFRANCEAVVSVLRKNKDILLMLLEVFVWDPLIEWTR  516 (1989)
Q Consensus       443 DFG~cFekGkrL~vPE~VPFRLTrNIv~ALGptGVEG--~FRssceatmr~LRknkd~LlsLLEaFVrDPLvdW~~  516 (1989)
                      |||+||+.+   +.||+|||||||||+++||+.|+||  .|+.+|+.++.+||+|.+.|++++++|+.+++-+|..
T Consensus       496 DFG~~f~~~---p~pe~vPFRLT~~mv~~mG~~~~e~f~~Fr~~c~~~~~~LR~~~~~il~l~~lM~~s~lp~~~~  568 (614)
T 3ls8_A          496 DFGYILGRD---PKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIAL  568 (614)
T ss_dssp             CCSSCTTCC---SSSSCCSSCCCHHHHHHTTCTTSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTTTSCCHHHHT
T ss_pred             ehHHhhccC---CCCCCCCeecCHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhcCCCCcccc
Confidence            999999876   5799999999999999999999997  9999999999999999999999999999999988864

>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A

Probab=100.00  E-value=6.8e-41  Score=432.69  Aligned_cols=223  Identities=22%  Similarity=0.338  Sum_probs=182.5

Q ss_pred             CCCcEEEEEEec-eeEEecCCCCceEEEEEcH----------------------------HHHHHHHHHHhcCCccCCCc
Q 037207          226 LRGIVTIASFSE-EVSILSTKTKPKKLVILGQ----------------------------MLLQAVNSFLRSSPATRSHS  276 (1989)
Q Consensus       226 ~~~~VrI~rF~p-~V~VL~SKqrPRRLtI~GS----------------------------QLFrLINsLL~kdkETRRR~  276 (1989)
                      .++.++|.+|.+ .+.|++|+++|+||+|+|+                            |||++||.+|.++    +++
T Consensus       778 l~P~~~I~~i~~~~~~V~~S~~~P~~L~f~g~D~~G~~y~~~~~~i~K~gDDLRQD~~v~Qli~lmn~il~~~----~~d  853 (1091)
T 3hhm_A          778 LNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQ----GLD  853 (1091)
T ss_dssp             TEEEEEECSBCGGGCEECCSSSCCEEEEECCCSTTSTTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHTT----TCC
T ss_pred             CCcceEEEEEeeceEEEeecccCcEEEEEecCCCCCccccccceEEEEcCcchhHHHHHHHHHHHHHHHHHhC----CCC
Confidence            446799999995 7999999999999999863                            9999999999987    489


Q ss_pred             cceecceeeEecCCcceeeecCCcccHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCchhhhhhhhHHHHhhccc
Q 037207          277 LGIRYYSVTPISGRAGLIQWVDNVISIYSVFKSWQHRAQLAQFSAIGAGNAKSSVPPPVPRPSDMFYGKIIPALKEKGIR  356 (1989)
Q Consensus       277 L~IrtYsVIPLSp~sGLIEWVpntvTL~eIyk~~~~R~~i~q~~~~~~~n~k~~~~~~vprP~dlfy~kl~~aLke~gi~  356 (1989)
                      |.+++|.|||+|+++||||||+|++||++|++.+.    +           . .  .      .. |             
T Consensus       854 L~l~~Y~Vip~s~~~GlIE~V~ns~Tl~~I~~~~~----~-----------~-~--~------~~-f-------------  895 (1091)
T 3hhm_A          854 LRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGG----L-----------K-G--A------LQ-F-------------  895 (1091)
T ss_dssp             CCCCCCCEEEEETTEEEEECCSSEEEHHHHHHSCT----T-----------T-C--T------TC-C-------------
T ss_pred             ceEeeeeEEEccCCCcceeecCCchhHHHHHHhhC----c-----------c-c--c------cc-c-------------
Confidence            99999999999999999999999999999987531    0           0 0  0      00 0             


Q ss_pred             ccccCCCCChHHHHHHHHHHHhccchhhHHHHHHhhcCChhHHHHHHHHHHHhhhhHHHHHhhcccCCCCCCceEEecCC
Q 037207          357 RVISRRDWPHDVKRKVLLDLMKEVPRQLLHQEIWCASEGFKAFSLKLKRYSESVAAMSMVGHILGLGDRHLDNILLDFSS  436 (1989)
Q Consensus       357 ~v~sR~dwp~evkreVF~eL~ketP~dlL~r~Lw~~S~sse~w~~~RknFTrSLAVmSmVGYILGLGDRHPsNILIDr~T  436 (1989)
                                              .+..|.+||...+ +...|...|++|++|+|+|||+|||||||||||+||||| .|
T Consensus       896 ------------------------~~~~L~~~f~~~~-~~~~~~~ar~nF~~S~A~ysvv~YiLgigDRH~~NILid-~t  949 (1091)
T 3hhm_A          896 ------------------------NSHTLHQWLKDKN-KGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVK-DD  949 (1091)
T ss_dssp             ------------------------CTTHHHHHHHTTS-CTTSHHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEEE-TT
T ss_pred             ------------------------CchHHHHHHHhcC-ChHHHHHHHHHHHHHhhhhhheEEEEeecCCCCcceEEe-CC
Confidence                                    0112444554444 455677789999999999999999999999999999999 59


Q ss_pred             CcEEEEecccccccCC-CC-cCCCcCCccccHHHHHHhccCC--cc-----chHHHHHHHHHHHHhhChhHHHHHHHHHh
Q 037207          437 GDIVHIDYNVCFDKGQ-RL-KVPEIVPFRLTQTIEAALGLTG--IE-----GTFRANCEAVVSVLRKNKDILLMLLEVFV  507 (1989)
Q Consensus       437 GeVVHIDFG~cFekGk-rL-~vPE~VPFRLTrNIv~ALGptG--VE-----G~FRssceatmr~LRknkd~LlsLLEaFV  507 (1989)
                      |+|||||||+||+.++ .+ ..||.|||||||||+++||+.|  ++     |.|+.+|+.++++||+|++.|++++++|+
T Consensus       950 G~v~HIDFG~~f~~~~~~~~~~~E~vPFrLT~~mv~vmg~G~~~~e~s~~fg~Fr~~c~~a~~~LR~~~~~il~LlelM~ 1029 (1091)
T 3hhm_A          950 GQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMML 1029 (1091)
T ss_dssp             SCEEECCCCCCSCC------------CCCCCHHHHHHSSCSSSCCSSSHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHGG
T ss_pred             CCEEEEeehhhhccCCccCCCCcCCCCceeHHHHHHHHhcCCCCcccchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence            9999999999999873 33 4599999999999999997644  44     99999999999999999999999999999


Q ss_pred             hCCCccccc
Q 037207          508 WDPLIEWTR  516 (1989)
Q Consensus       508 rDPLvdW~~  516 (1989)
                      ++||.+|..
T Consensus      1030 ~s~lp~~~~ 1038 (1091)
T 3hhm_A         1030 GSGMPELQS 1038 (1091)
T ss_dssp             GSCCTTCSS
T ss_pred             cCCCCccCc
Confidence            999999974

>1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A

Probab=99.51  E-value=2.4e-15  Score=122.13  Aligned_cols=33  Identities=48%  Similarity=0.989  Sum_probs=31.7

Q ss_pred             cccCHHHHHHHHHHHHcCchhhHhhccccccCC
Q 037207         1957 RNLSIAEQVDHLLKQATSVDNLCNMYEGWTPWI 1989 (1989)
Q Consensus      1957 ~~LsV~~QVd~LI~qATs~~NLcqmY~GW~pf~ 1989 (1989)
                      ++|||++||++||+||||++|||+||+||||||
T Consensus         1 ~~lsv~~QV~~LI~~At~~~NL~~my~GW~p~w   33 (33)
T 1w1n_A            1 NELDVPEQVDKLIQQATSIERLCQHYIGWCPFW   33 (33)
T ss_dssp             CCSCSTHHHHHHHHHHHHHHHHHTTSCSCCTTC
T ss_pred             CCCCHHHHHHHHHHHhcCHHHHHHHhhhcccCC
Confidence            368999999999999999999999999999999

>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}

Probab=99.48  E-value=2.6e-14  Score=147.15  Aligned_cols=108  Identities=23%  Similarity=0.406  Sum_probs=84.7

Q ss_pred             hchhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHH
Q 037207           39 LYPRLIQDVELMINELGNLTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVV  118 (1989)
Q Consensus        39 ~hP~LV~ev~l~v~ELiRIavLW~E~Wl~~L~qL~~dv~rRl~~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~  118 (1989)
                      .+|.||.+..   .||+||||||+|+|+++|+               ||+|++      +.++   |.+++..+|.|++.
T Consensus        16 ~~~~~v~~~~---~ELIRvAIlW~E~W~e~Le---------------eASrly------f~~~---n~~~m~~~L~pLh~   68 (126)
T 2npu_A           16 TTENLYFQGA---MELIRVPILWHEMWHEGLE---------------EASRLY------FGER---NVKGMFEVLEPLHA   68 (126)
T ss_dssp             -------------CCCCCCSSSHHHHHHHHHH---------------HHHHHH------HHTT---CHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHH---HHHHHHHHhHHHHHHHHHH---------------HHHHHH------hccc---CHHHHHHHHHHHHH
Confidence            3588888887   5999999999999999995               688887      4454   47888899999998


Q ss_pred             HHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHhhcCCc--cccchHHHHHHHHHHHHHHHHh
Q 037207          119 ALERRLASTSRKPETPHEIWFHEEFGEQLKSAILNFKTPP--ASAAALGDVWRPFDNIAASLAS  180 (1989)
Q Consensus       119 ~Le~~~a~Ts~~peTphE~~F~k~yg~~L~~Aie~lk~~~--~~~~~L~e~W~~fk~I~k~L~~  180 (1989)
                      .|+       ++|+|+.|.+|.+.||..|.+|.+.++++.  +...+++++|+.|+.+++++..
T Consensus        69 ~l~-------~~PeT~~E~sF~~~fG~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~~Vf~rI~k  125 (126)
T 2npu_A           69 MME-------RGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRISK  125 (126)
T ss_dssp             HHH-------HSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHc-------cCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhc
Confidence            887       489999999999999999999999988753  3456899999999999999863

>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*

Probab=99.32  E-value=2.7e-12  Score=126.61  Aligned_cols=91  Identities=24%  Similarity=0.493  Sum_probs=78.6

Q ss_pred             hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHHHHHHHHhhcCCCCCChhH
Q 037207           57 LTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHE  136 (1989)
Q Consensus        57 IavLW~E~Wl~~L~qL~~dv~rRl~~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~~Le~~~a~Ts~~peTphE  136 (1989)
                      |||||+|+|+++|+               ||+|.+      +.++   |.+++..++.|++..|+       ++|+|+.|
T Consensus         1 vAiLW~E~W~e~Le---------------eAsr~~------f~~~---n~~~m~~~L~pLh~~l~-------~~peT~~E   49 (94)
T 3fap_B            1 VAILWHEMWHEGLE---------------EASRLY------FGER---NVKGMFEVLEPLHAMME-------RGPQTLKE   49 (94)
T ss_dssp             CCCCHHHHHHHHHH---------------HHHHHH------HTTC---CHHHHHHHHHHHHHHHH-------HCCCSHHH
T ss_pred             CcccHHHHHHHHHH---------------HHHHHH------hccC---CHHHHHHHHHHHHHHHc-------CCCCCHHH
Confidence            68999999999995               578887      4555   47889999999999887       48999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCc--cccchHHHHHHHHHHHHHHH
Q 037207          137 IWFHEEFGEQLKSAILNFKTPP--ASAAALGDVWRPFDNIAASL  178 (1989)
Q Consensus       137 ~~F~k~yg~~L~~Aie~lk~~~--~~~~~L~e~W~~fk~I~k~L  178 (1989)
                      .+|++.||+.|.+|.+.++++.  +...+++++|+.|..+++++
T Consensus        50 ~sF~~~fG~~L~~A~~~~~~y~~t~~~~~l~qAWdiY~~V~~ri   93 (94)
T 3fap_B           50 TSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRI   93 (94)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHHHHHhcc
Confidence            9999999999999999888743  34579999999999999876

>1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A

Probab=89.63  E-value=0.11  Score=42.78  Aligned_cols=24  Identities=8%  Similarity=0.241  Sum_probs=22.4

Q ss_pred             hhhhhhHHHHHHHHhcchhhhhhhH
Q 037207          599 VLHETSTKSMVAEANCNAEKIRASF  623 (1989)
Q Consensus       599 l~~E~~v~~Lv~eA~~~~enl~~~~  623 (1989)
                      ++.|.+|..|+++|++ ++|||.||
T Consensus         3 lsv~~QV~~LI~~At~-~~NL~~my   26 (33)
T 1w1n_A            3 LDVPEQVDKLIQQATS-IERLCQHY   26 (33)
T ss_dssp             SCSTHHHHHHHHHHHH-HHHHHTTS
T ss_pred             CCHHHHHHHHHHHhcC-HHHHHHHh
Confidence            5788999999999999 89999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1989
d1e7ua4	369	d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (P	5e-31
d1e7ua4	369	d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (P	0.001
d3fapb_	94	a.24.7.1 (B:) FKBP12-rapamycin-binding domain of F	5e-04

>d3fapb_ a.24.7.1 (B:) FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
family: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
domain: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 31/92 (33%)

Query: 59  VLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVV 118
           +LW E+W   L               EEA+R+          ++ +       M      
Sbjct: 3   ILWHEMWHEGL---------------EEASRL-------YFGERNVKG-----MFE---- 31

Query: 119 ALERRLASTSRKPETPHEIWFHEEFGEQLKSA 150
            LE   A   R P+T  E  F++ +G  L  A
Sbjct: 32  VLEPLHAMMERGPQTLKETSFNQAYGRDLMEA 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1989
d1e7ua4	369	Phoshoinositide 3-kinase (PI3K), catalytic domain	100.0
d3fapb_	94	FKBP12-rapamycin-binding domain of FKBP-rapamycin-	99.34

>d3fapb_ a.24.7.1 (B:) FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
family: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
domain: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=7.6e-13  Score=128.17  Aligned_cols=91  Identities=24%  Similarity=0.493  Sum_probs=79.1

Q ss_pred             hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHhhhhHHHHHHhhHHHHHHHHHHHhhcCCCCCChhH
Q 037207           57 LTVLWEELWLSTLQDLHADVMRRINVLKEEAARIAENATLSQSEKKKINAAKYSAMMAPIVVALERRLASTSRKPETPHE  136 (1989)
Q Consensus        57 IavLW~E~Wl~~L~qL~~dv~rRl~~L~eEaaRl~~n~~Ls~~eK~~i~~~k~~aim~Piv~~Le~~~a~Ts~~peTphE  136 (1989)
                      |||||+|+|+++|+               ||+|.+      +.++   |.+++..++.|++..|+       ++|+|+.|
T Consensus         1 VAiLW~E~W~e~Le---------------eAsr~y------~~~~---n~~~m~~~L~pLhe~L~-------k~PeT~~E   49 (94)
T d3fapb_           1 VAILWHEMWHEGLE---------------EASRLY------FGER---NVKGMFEVLEPLHAMME-------RGPQTLKE   49 (94)
T ss_dssp             CCCCHHHHHHHHHH---------------HHHHHH------HTTC---CHHHHHHHHHHHHHHHH-------HCCCSHHH
T ss_pred             CcccHHHHHHHHHH---------------HHHHHH------cccC---CHHHHHHHHHHHHHHHc-------cCCCCHHH
Confidence            68999999999994               588886      4455   47889999999999987       48999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCc--cccchHHHHHHHHHHHHHHH
Q 037207          137 IWFHEEFGEQLKSAILNFKTPP--ASAAALGDVWRPFDNIAASL  178 (1989)
Q Consensus       137 ~~F~k~yg~~L~~Aie~lk~~~--~~~~~L~e~W~~fk~I~k~L  178 (1989)
                      .+|++.||.+|.+|.+.++++.  +...+++++|+.|+.++++|
T Consensus        50 ~sF~q~fG~~L~eA~~~~~~y~~t~~~~~L~qAWdiY~~Vf~ri   93 (94)
T d3fapb_          50 TSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRI   93 (94)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHhhc
Confidence            9999999999999999988754  44579999999999999986