Citrus Sinensis ID: 037214

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
MNNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEEEINRRLETSSSSSSFNSISNRDEEDDPQGKIDPDMNFELKWMMLSSEDPEERTINFPDIRTLATDLDDPSDDNRAGATTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
cccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHccccccEEEccccccHHHHHHHHHHHHHHcccEEEcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHcccccccccHHHcccHHHHHHHHHHHHHHHHHHHEEEEHHHcccHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHccccccccccccccccccc
cccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccccEccccccccEEEEEcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEccccHHccccccccccccccccccccccccccccccccccHHHHHHHHccccccHcccccccccEEEEEccccccccccccccHHHHEEcccccccHEHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccEEEccccccccccHHHHHHHHHHHHHcccccccccccEEcc
mnnnnedipeplceqkpskffgiemhwmpaegyaeSNKESLRKIAMHQILQISksnnldamiPYAAMNIFDrfisrnevprmlggmrEDIVLAADACLTiswsvkstsfsydefleadnheykdtdARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIipigrgikrrtLNEIVIQtqgdisftrfLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEEEINRRletssssssfnsisnrdeeddpqgkidpdmnFELKWMmlssedpeertinfpdirtlatdlddpsddnragaTTFRELHIsstrclptviaapTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFccgqigatevteagetsypnfRELKRRQCktlkngqfipqishplfli
mnnnnedipeplceQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEadnheykdtdaRVVRKVQLVAMEqkidvgvdwrMRVATPISFVEFFVgiipigrgikrrtlNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNdqyyrekenmiRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEEEinrrletssssssfnsisnrdeeddpqgkiDPDMNFELKWMMLSSEDPEERTINFPDIRtlatdlddpsddnRAGATTFRelhisstrclptviAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEvteagetsypnFRELKRRQCKtlkngqfipqishplfli
MNNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVgiipigrgikrrTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEEEINRRLETssssssfnsisnRDEEDDPQGKIDPDMNFELKWMMLSSEDPEERTINFPDIRTLATDLDDPSDDNRAGATTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
*******************FFGIEMHWMPAEGYA******LRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLE**************************************************************************************TTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISH*****
***NNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKM*************************************************************************************************GATTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
*********EPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEEEIN************************QGKIDPDMNFELKWMMLSSEDPEERTINFPDIRTLATDLDDPSDDNRAGATTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
****NEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEE*****************************KIDPDMNFELKWMMLSSEDPEERTINFPDIRTLATDLDDPSDDNRAGATTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
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MNNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIMLERDLESADWKKLEEEINRRLETSSSSSSFNSISNRDEEDDPQGKIDPDMNFELKWMMLSSEDPEERTINFPDIRTLATDLDDPSDDNRAGATTFRELHISSTRCLPTVIAAPTLFTACRYLYNGLYERKKLILVARKYVENDDLEAYLQETYKFCCGQIGATEVTEAGETSYPNFRELKRRQCKTLKNGQFIPQISHPLFLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query455 2.2.26 [Sep-21-2011]
Q9ZR04302 Putative cyclin-D6-1 OS=A yes no 0.413 0.622 0.288 1e-13
P42751339 Cyclin-D1-1 OS=Arabidopsi no no 0.375 0.504 0.257 1e-08
Q0J233308 Cyclin-D2-1 OS=Oryza sati yes no 0.375 0.555 0.252 2e-08
Q8LHA8356 Cyclin-D2-2 OS=Oryza sati yes no 0.362 0.463 0.260 5e-07
Q10K98405 Putative cyclin-D2-3 OS=O no no 0.356 0.4 0.261 6e-07
Q8LGA1308 Cyclin-D4-1 OS=Arabidopsi no no 0.382 0.564 0.222 1e-06
Q4KYM5383 Cyclin-D4-2 OS=Oryza sati no no 0.325 0.386 0.240 3e-06
Q147G5436 Cyclin-A2-2 OS=Arabidopsi no no 0.336 0.350 0.264 1e-05
Q8H339354 Cyclin-D1-2 OS=Oryza sati no no 0.318 0.409 0.267 1e-05
P42753376 Cyclin-D3-1 OS=Arabidopsi no no 0.338 0.409 0.222 1e-05
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1 Back     alignment and function desciption
 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 30/218 (13%)

Query: 2   NNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESL-----RKIAMHQILQISKSN 56
           NN N+D      E  P   F +E   MP+  Y  S K S      R  A+  I Q S+  
Sbjct: 16  NNFNDDTDY---ETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKF 72

Query: 57  NLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLE 116
           + D  + Y A+N  DRF+S  ++P+    + + I L+   C+++S  ++    S  + L 
Sbjct: 73  D-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLS---CVSLSAKMRKPDMSVSD-LP 127

Query: 117 ADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGI--------IPI 168
            +   +   DA+++ +     ME  I   + WRMR  TP SF+ FF+ +        + +
Sbjct: 128 VEGEFF---DAQMIER-----MENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLL 179

Query: 169 GRGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTA 206
              +K +T +++    Q DISF  F P+VIA +A+  A
Sbjct: 180 KHSLKSQT-SDLTFSLQHDISFLEFKPSVIAGAALLFA 216

Arabidopsis thaliana (taxid: 3702)
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3 Back     alignment and function description
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2 Back     alignment and function description
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1 Back     alignment and function description
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1 Back     alignment and function description
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2 Back     alignment and function description
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2 Back     alignment and function description
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1 Back     alignment and function description
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2 Back     alignment and function description
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query455
357452443423 Cyclin-D1-1 [Medicago truncatula] gi|355 0.481 0.517 0.298 6e-21
224078830305 predicted protein [Populus trichocarpa] 0.406 0.606 0.315 1e-18
224114109309 predicted protein [Populus trichocarpa] 0.404 0.595 0.331 4e-18
225447693294 PREDICTED: putative cyclin-D6-1 [Vitis v 0.404 0.625 0.302 7e-18
296081259315 unnamed protein product [Vitis vinifera] 0.404 0.584 0.302 8e-18
297745660407 unnamed protein product [Vitis vinifera] 0.413 0.461 0.304 5e-17
359495729327 PREDICTED: putative cyclin-D6-1-like, pa 0.413 0.574 0.304 7e-17
224116258257 predicted protein [Populus trichocarpa] 0.364 0.645 0.333 8e-17
255567453305 cyclin d, putative [Ricinus communis] gi 0.404 0.603 0.296 2e-16
224146705324 predicted protein [Populus trichocarpa] 0.443 0.623 0.302 3e-16
>gi|357452443|ref|XP_003596498.1| Cyclin-D1-1 [Medicago truncatula] gi|355485546|gb|AES66749.1| Cyclin-D1-1 [Medicago truncatula] Back     alignment and taxonomy information
 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 126/238 (52%), Gaps = 19/238 (7%)

Query: 20  FFGIEMHWMPA-EGYAESNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNE 78
           +F +E  ++ A + +   +    R +A+  I ++S+S++ D+ IPY AMN FDRF+S+++
Sbjct: 22  YFNVESEFIAATDTFTTPHDILFRNLAVSIIAKLSRSDDPDSFIPYLAMNYFDRFLSQHK 81

Query: 79  VPRMLGGMR---EDIVLAADACLTISWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQL 135
           +       R   E + L A +CLTIS  +++ SFS D FLE   + Y+D + R+   + +
Sbjct: 82  LNLEDVEGRTETERVRLIAVSCLTISSKMRTNSFSVDRFLE---NLYRDMNVRITPPM-V 137

Query: 136 VAMEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLNEIVIQTQGDISFTRFLP 195
           + ME  I   + W MR  T   F+  +        G KRR++NEI++Q QG+ +F  ++P
Sbjct: 138 MRMELLILQELQWAMRSVTAFCFLNHYYPYFKKFCGFKRRSINEIIVQAQGEHTFAHYMP 197

Query: 196 TVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTCKMCIEKQIML 253
           + IA SA   A +  +  +Y    E++  ++            L+   K C++K + L
Sbjct: 198 SHIAISAFLAAAQTKYPSKYSEIAEDIKSKIG-----------LQGQVKECVKKMVDL 244

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224078830|ref|XP_002305644.1| predicted protein [Populus trichocarpa] gi|159025731|emb|CAN88866.1| D6-type cyclin [Populus trichocarpa] gi|222848608|gb|EEE86155.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224114109|ref|XP_002316670.1| predicted protein [Populus trichocarpa] gi|159025733|emb|CAN88867.1| D6-type cyclin [Populus trichocarpa] gi|222859735|gb|EEE97282.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447693|ref|XP_002276869.1| PREDICTED: putative cyclin-D6-1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296081259|emb|CBI18003.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745660|emb|CBI40871.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359495729|ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|224116258|ref|XP_002317253.1| predicted protein [Populus trichocarpa] gi|159025729|emb|CAN88865.1| D6-type cyclin [Populus trichocarpa] gi|222860318|gb|EEE97865.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255567453|ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223536067|gb|EEF37725.1| cyclin d, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224146705|ref|XP_002326106.1| predicted protein [Populus trichocarpa] gi|159025735|emb|CAN88868.1| D6-type cyclin [Populus trichocarpa] gi|222862981|gb|EEF00488.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query455
TAIR|locus:2125522302 CYCD6;1 "AT4G03270" [Arabidops 0.481 0.725 0.289 2.6e-11
TAIR|locus:2020663339 CYCD1;1 "CYCLIN D1;1" [Arabido 0.397 0.533 0.245 2.5e-07
TAIR|locus:2148052436 CYC3B "mitotic-like cyclin 3B 0.419 0.438 0.252 6.8e-05
TAIR|locus:2124331376 CYCD3;1 "CYCLIN D3;1" [Arabido 0.459 0.555 0.206 0.00019
TAIR|locus:2083128361 CYCD3;3 "AT3G50070" [Arabidops 0.408 0.515 0.215 0.00038
UNIPROTKB|P24385295 CCND1 "G1/S-specific cyclin-D1 0.461 0.711 0.246 0.00092
TAIR|locus:2125522 CYCD6;1 "AT4G03270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 72/249 (28%), Positives = 112/249 (44%)

Query:     2 NNNNEDIPEPLCEQKPSKFFGIEMHWMPAEGYAESNKESL-----RKIAMHQILQISKSN 56
             NN N+D      E  P   F +E   MP+  Y  S K S      R  A+  I Q S+  
Sbjct:    16 NNFNDDTDY---ETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKF 72

Query:    57 NLDAMIPYAAMNIFDRFISRNEVPRMLGGMREDIVLAADACLTISWSVKSTSFSYDEFLE 116
             + D  + Y A+N  DRF+S  ++P+    + + I L+   C+++S  ++    S  + L 
Sbjct:    73 D-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLS---CVSLSAKMRKPDMSVSD-LP 127

Query:   117 ADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVXXXXXXXXXXXXT 176
              +   +   DA+++ +     ME  I   + WRMR  TP SF+ FF+             
Sbjct:   128 VEGEFF---DAQMIER-----MENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLL 179

Query:   177 LNEIVIQT-------QGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKY 229
              + +  QT       Q DISF  F P+VIA +A+  A   L   Q+     N I + T Y
Sbjct:   180 KHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFS-NRINQCT-Y 237

Query:   230 VDEVDLEAC 238
             V++ +L  C
Sbjct:   238 VNKDELMEC 246
GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM;IEA
GO:0051726 "regulation of cell cycle" evidence=ISS
GO:0005515 "protein binding" evidence=IPI
GO:0000278 "mitotic cell cycle" evidence=RCA
GO:0010440 "stomatal lineage progression" evidence=RCA
GO:0042023 "DNA endoreduplication" evidence=RCA
GO:0045736 "negative regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=RCA
TAIR|locus:2020663 CYCD1;1 "CYCLIN D1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148052 CYC3B "mitotic-like cyclin 3B from Arabidopsis" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124331 CYCD3;1 "CYCLIN D3;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083128 CYCD3;3 "AT3G50070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P24385 CCND1 "G1/S-specific cyclin-D1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 455
KOG0656335 consensus G1/S-specific cyclin D [Cell cycle contr 100.0
KOG0653391 consensus Cyclin B and related kinase-activating p 100.0
KOG0655408 consensus G1/S-specific cyclin E [Cell cycle contr 100.0
COG5024440 Cyclin [Cell division and chromosome partitioning] 100.0
KOG0654359 consensus G2/Mitotic-specific cyclin A [Cell cycle 99.97
PF00134127 Cyclin_N: Cyclin, N-terminal domain; InterPro: IPR 99.87
TIGR00569305 ccl1 cyclin ccl1. University). 99.86
KOG0834323 consensus CDK9 kinase-activating protein cyclin T 99.8
KOG0835367 consensus Cyclin L [General function prediction on 99.78
KOG0794264 consensus CDK8 kinase-activating protein cyclin C 99.72
COG5333297 CCL1 Cdk activating kinase (CAK)/RNA polymerase II 99.62
PF02984118 Cyclin_C: Cyclin, C-terminal domain; InterPro: IPR 99.61
PRK00423310 tfb transcription initiation factor IIB; Reviewed 99.46
cd0004388 CYCLIN Cyclin box fold. Protein binding domain fun 99.32
smart0038583 CYCLIN domain present in cyclins, TFIIB and Retino 99.24
KOG2496325 consensus Cdk activating kinase (CAK)/RNA polymera 99.23
COG1405285 SUA7 Transcription initiation factor TFIIIB, Brf1 98.86
KOG1597308 consensus Transcription initiation factor TFIIB [T 98.58
smart0038583 CYCLIN domain present in cyclins, TFIIB and Retino 98.38
cd0004388 CYCLIN Cyclin box fold. Protein binding domain fun 98.33
PF08613149 Cyclin: Cyclin; InterPro: IPR013922 Cyclins are eu 97.8
KOG1598521 consensus Transcription initiation factor TFIIIB, 97.11
KOG4164497 consensus Cyclin ik3-1/CABLES [Cell cycle control, 97.05
PF0038271 TFIIB: Transcription factor TFIIB repeat; InterPro 95.8
PF0038271 TFIIB: Transcription factor TFIIB repeat; InterPro 95.7
PRK00423310 tfb transcription initiation factor IIB; Reviewed 91.85
KOG1674218 consensus Cyclin [General function prediction only 91.29
PF00134127 Cyclin_N: Cyclin, N-terminal domain; InterPro: IPR 83.9
>KOG0656 consensus G1/S-specific cyclin D [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-37  Score=313.82  Aligned_cols=217  Identities=22%  Similarity=0.350  Sum_probs=190.6

Q ss_pred             CCcchHHHHHHHHhhhhCCCCCccc----cccHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHhcCCccccccCCC
Q 037214           11 PLCEQKPSKFFGIEMHWMPAEGYAE----SNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGM   86 (455)
Q Consensus        11 ~~~~E~l~~Lle~E~~~~p~~~yl~----~it~~~R~~LVdWL~eV~~~f~L~~eTl~LAV~yLDRFLs~~~V~~~~~~k   86 (455)
                      .+.++++..|+++|.++.|..+|..    .+++.+|.++++||++|+.++++.++|++|||||||||++.+++++   ++
T Consensus        43 ~~~e~~i~~ll~kEe~~~p~~~~~~~~~~~~~~~~R~~A~~WIl~V~~~~~~~~~~~~LA~NYlDRFls~~~l~k---~k  119 (335)
T KOG0656|consen   43 LWDERVLANLLEKEEQHNPSLDYFLCVQKLILSSMRKQALDWILKVCEEYNFEPLVFLLAMNYLDRFLSSQKLPK---DK  119 (335)
T ss_pred             cccHHHHHHHHHHHHHhCCCCchhhhcccccccHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHhhcccccCC---Cc
Confidence            4778999999999999999988554    6899999999999999999999999999999999999999999999   78


Q ss_pred             ccchhhhHHHHHHHHhhhccCCCC-hhhhhhccCCceeecCCccccHHHHHHHHHHHHHhcCcccccCChHHHHHHHHHh
Q 037214           87 REDIVLAADACLTISWSVKSTSFS-YDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGI  165 (455)
Q Consensus        87 ~~~LQLvgvaCL~IASK~EE~~~P-l~dLqv~~s~~~~~td~~yt~~~eIl~ME~~IL~~L~w~L~~pTP~~FL~~fl~~  165 (455)
                      +|.+||+|+|||+||||+||+.+| +.|+|+.+.+|+|.       ++.|.+||..||.+|+|+++.+||++|+++|+..
T Consensus       120 ~W~lQLlAvaCLsLAsKmeE~~vPll~dl~v~~~~~~fe-------aktI~rmELLVLstL~Wrl~aVTP~sF~~~fl~k  192 (335)
T KOG0656|consen  120 PWMLQLLAVACLSLASKMEETDVPLLADLQVEYTDNVFE-------AKTIQRMELLVLSTLKWRLRAVTPFSFIDHFLSK  192 (335)
T ss_pred             hHHHHHHHHHHHHHHHhhcCcCCchhhhhhhcccccccc-------HHHHHHHHHHHHhhccccccCCCchHHHHHHHHH
Confidence            888999999999999999999988 58999887778888       8899999999999999999999999999999999


Q ss_pred             cCCC----HHHHHHHHHHHHHHHhccccccCcChHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHcCCCCHHHHHHHHH
Q 037214          166 IPIG----RGIKRRTLNEIVIQTQGDISFTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLE  240 (455)
Q Consensus       166 ~~~~----~~l~~~al~~LlelsL~d~~fl~y~PS~IAAAAI~lA~~~l~~~~~~~w~~~Ll~~~s~yv~~~~L~~C~~  240 (455)
                      ++..    ..+..++ ..++..+..|..|+.|+||+||+|++.++...+....+......+ . ...+++++.+..|+.
T Consensus       193 i~~~~~~~~~~~~~~-s~~ll~~~~d~~Fl~y~pSviAaa~~~~v~~~~~~l~~~~~~~~~-~-~~~~l~~e~~~~~~~  268 (335)
T KOG0656|consen  193 ISQKDHNKHLFLKHA-SLFLLSVITDIKFLEYPPSVIAAAAILSVSASVDGLDFREYENNL-L-SLLSLSKEKVNRCYD  268 (335)
T ss_pred             cCcccchHHHHHHHH-HHHHHHHhhhhhhhcCChHHHHHHHHHHHHHhhcchhhhhhhHHH-H-HHHHhhHHhhhcchh
Confidence            9883    4556777 788888999999999999999999998888877765543322333 2 334468888888887

>KOG0653 consensus Cyclin B and related kinase-activating proteins [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0655 consensus G1/S-specific cyclin E [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG5024 Cyclin [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG0654 consensus G2/Mitotic-specific cyclin A [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF00134 Cyclin_N: Cyclin, N-terminal domain; InterPro: IPR006671 Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs) Back     alignment and domain information
>TIGR00569 ccl1 cyclin ccl1 Back     alignment and domain information
>KOG0834 consensus CDK9 kinase-activating protein cyclin T [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0835 consensus Cyclin L [General function prediction only] Back     alignment and domain information
>KOG0794 consensus CDK8 kinase-activating protein cyclin C [Transcription] Back     alignment and domain information
>COG5333 CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] Back     alignment and domain information
>PF02984 Cyclin_C: Cyclin, C-terminal domain; InterPro: IPR004367 Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs) Back     alignment and domain information
>PRK00423 tfb transcription initiation factor IIB; Reviewed Back     alignment and domain information
>cd00043 CYCLIN Cyclin box fold Back     alignment and domain information
>smart00385 CYCLIN domain present in cyclins, TFIIB and Retinoblastoma Back     alignment and domain information
>KOG2496 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] Back     alignment and domain information
>COG1405 SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription] Back     alignment and domain information
>KOG1597 consensus Transcription initiation factor TFIIB [Transcription] Back     alignment and domain information
>smart00385 CYCLIN domain present in cyclins, TFIIB and Retinoblastoma Back     alignment and domain information
>cd00043 CYCLIN Cyclin box fold Back     alignment and domain information
>PF08613 Cyclin: Cyclin; InterPro: IPR013922 Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs) Back     alignment and domain information
>KOG1598 consensus Transcription initiation factor TFIIIB, Brf1 subunit [Transcription] Back     alignment and domain information
>KOG4164 consensus Cyclin ik3-1/CABLES [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF00382 TFIIB: Transcription factor TFIIB repeat; InterPro: IPR013150 Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs) Back     alignment and domain information
>PF00382 TFIIB: Transcription factor TFIIB repeat; InterPro: IPR013150 Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs) Back     alignment and domain information
>PRK00423 tfb transcription initiation factor IIB; Reviewed Back     alignment and domain information
>KOG1674 consensus Cyclin [General function prediction only] Back     alignment and domain information
>PF00134 Cyclin_N: Cyclin, N-terminal domain; InterPro: IPR006671 Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
3g33_B306 CCND3 protein; Ser/Thr protein kinase, cell cycle, 4e-13
1f5q_B252 Gamma herpesvirus cyclin; herpesviral cyclin, cycl 7e-13
2w96_A271 G1/S-specific cyclin-D1; serine/threonine-protein 1e-11
1g3n_C257 V-cyclin; cyclin-dependent kinase, INK4 inhibitor, 9e-11
2b9r_A269 Human cyclin B1; cell cycle; 2.90A {Homo sapiens} 8e-09
2f2c_A254 Cyclin homolog, V-cyclin; small molecule inhibitor 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
2cch_B260 Cyclin A2, cyclin-A; complex(transferase/cell divi 5e-07
1w98_B283 Cyclin E, G1/S-specific cyclin E1; cell cycle, tra 4e-06
2ivx_A257 Cyclin-T2; transcription regulation, cell division 2e-05
1zp2_A235 RNA polymerase II holoenzyme cyclin-like subunit; 7e-05
2i53_A258 Cyclin K; cell cycle, transcription, cyclin BOX, C 2e-04
1jkw_A323 Cyclin H; cell cycle, cell division, nuclear prote 6e-04
>3g33_B CCND3 protein; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 306 Back     alignment and structure
 Score = 68.7 bits (168), Expect = 4e-13
 Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 32/239 (13%)

Query: 24  EMHWMPAEGYAESN----KESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEV 79
           E  ++P   Y +      K  +RK+  + +L++ +    +  +   AMN  DR++S    
Sbjct: 49  EERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPT 108

Query: 80  PRMLGGMREDIVLAADACLTISWSVKSTSFSYDEF--LEADNHEYKDTDARVVRKVQLVA 137
            +        + L    C+ ++   K       E   L  +      TD   V   QL  
Sbjct: 109 RK------AQLQLLGAVCMLLAS--K-----LRETTPLTIEKLCI-YTD-HAVSPRQLRD 153

Query: 138 MEQKIDVGVDWRMRVATPISFVEFFVGIIPIGRGIKRRTLN------EIVIQTQGDISFT 191
            E  +   + W +       F+ F +  + + R  +            +      D +F 
Sbjct: 154 WEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCAT---DYTFA 210

Query: 192 RFLPTVIAASAVFTACRVLFNDQYYREKEN-MIRRVTKYVDEVDLEACLEDTCKMCIEK 249
            + P++IA  ++  A + L       ++   ++  +T   +   L AC E       E 
Sbjct: 211 MYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGT-EVDCLRACQEQIEAALRES 268
>1f5q_B Gamma herpesvirus cyclin; herpesviral cyclin, cyclin dependent kinase. protein/protein complex, transferase; 2.50A {Murid herpesvirus 4} SCOP: a.74.1.1 a.74.1.1 Length = 252 Back     alignment and structure
>2w96_A G1/S-specific cyclin-D1; serine/threonine-protein kinase, chromosomal rearrangement, ATP-binding, transferase, polymorphism, cell division; 2.30A {Homo sapiens} PDB: 2w99_A 2w9f_A 2w9z_A Length = 271 Back     alignment and structure
>1g3n_C V-cyclin; cyclin-dependent kinase, INK4 inhibitor, viral cyclin, cell cycle, signaling protein; 2.90A {Human herpesvirus 8} SCOP: a.74.1.1 a.74.1.1 Length = 257 Back     alignment and structure
>2b9r_A Human cyclin B1; cell cycle; 2.90A {Homo sapiens} PDB: 2jgz_B* Length = 269 Back     alignment and structure
>2f2c_A Cyclin homolog, V-cyclin; small molecule inhibitor bound between N-terminal and C-TERM domain of kinase, cell cycle-transferase complex; HET: AP9; 2.80A {Herpesvirus saimiri} SCOP: a.74.1.1 a.74.1.1 PDB: 1jow_A* 2euf_A* 1xo2_A* 1bu2_A Length = 254 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2cch_B Cyclin A2, cyclin-A; complex(transferase/cell division), ATP-binding, CDK2, cell cycle, cyclin, mitosis, nuclear protein; HET: TPO ATP; 1.7A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 1fvv_B* 1jsu_B* 1okv_B 1okw_B* 1ol1_B* 1ol2_B* 1urc_B 1fin_B* 2c5p_B* 2c5o_B* 2i40_B* 2wev_B* 2wfy_B 2whb_B* 3eid_B* 3ej1_B* 3eoc_B* 2wha_B* 2x1n_B* 1vyw_B* ... Length = 260 Back     alignment and structure
>1w98_B Cyclin E, G1/S-specific cyclin E1; cell cycle, transferase; HET: TPO; 2.15A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 Length = 283 Back     alignment and structure
>2ivx_A Cyclin-T2; transcription regulation, cell division, phosphorylation, NU protein, cell cycle, transcription; 1.8A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_A 3mi9_B* 3mia_B* 3tnh_B* 3tni_B* 3blh_B* 3blq_B* 3blr_B* 3lq5_B* 3my1_B* 3tn8_B* Length = 257 Back     alignment and structure
>1zp2_A RNA polymerase II holoenzyme cyclin-like subunit; cyclin repeat domains, transcription-cell cycle complex; 3.00A {Schizosaccharomyces pombe} Length = 235 Back     alignment and structure
>2i53_A Cyclin K; cell cycle, transcription, cyclin BOX, CDK9, positive transcription elongation factor, P-TEFB; 1.50A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 Length = 258 Back     alignment and structure
>1jkw_A Cyclin H; cell cycle, cell division, nuclear protein; 2.60A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 1kxu_A Length = 323 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query455
2cch_B260 Cyclin A2, cyclin-A; complex(transferase/cell divi 100.0
2b9r_A269 Human cyclin B1; cell cycle; 2.90A {Homo sapiens} 100.0
2f2c_A254 Cyclin homolog, V-cyclin; small molecule inhibitor 100.0
1g3n_C257 V-cyclin; cyclin-dependent kinase, INK4 inhibitor, 100.0
3g33_B306 CCND3 protein; Ser/Thr protein kinase, cell cycle, 100.0
1f5q_B252 Gamma herpesvirus cyclin; herpesviral cyclin, cycl 100.0
2w96_A271 G1/S-specific cyclin-D1; serine/threonine-protein 100.0
1w98_B283 Cyclin E, G1/S-specific cyclin E1; cell cycle, tra 100.0
2i53_A258 Cyclin K; cell cycle, transcription, cyclin BOX, C 100.0
2ivx_A257 Cyclin-T2; transcription regulation, cell division 100.0
3rgf_B285 Cyclin-C; protein kinase complex, transferase,tran 99.98
2pk2_A358 Cyclin-T1, protein TAT; TAR, twinning, transcripti 99.97
1zp2_A235 RNA polymerase II holoenzyme cyclin-like subunit; 99.97
1jkw_A323 Cyclin H; cell cycle, cell division, nuclear prote 99.96
1c9b_A207 General transcription factor IIB; protein-DNA comp 99.91
1ais_B200 TFB TFIIB, protein (transcription initiation facto 99.84
3k7a_M345 Transcription initiation factor IIB; RNA polymeras 99.61
4bbr_M345 Transcription initiation factor IIB; RNA polymeras 99.21
2pmi_B293 PHO85 cyclin PHO80, aminoglycoside anti; cyclin-de 97.62
1ais_B200 TFB TFIIB, protein (transcription initiation facto 95.28
1c9b_A207 General transcription factor IIB; protein-DNA comp 94.53
4bbr_M345 Transcription initiation factor IIB; RNA polymeras 90.1
1zp2_A235 RNA polymerase II holoenzyme cyclin-like subunit; 87.91
3k7a_M345 Transcription initiation factor IIB; RNA polymeras 83.44
>2cch_B Cyclin A2, cyclin-A; complex(transferase/cell division), ATP-binding, CDK2, cell cycle, cyclin, mitosis, nuclear protein; HET: TPO ATP; 1.7A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 1fvv_B* 1jsu_B* 1okv_B 1okw_B* 1ol1_B* 1ol2_B* 1urc_B 1fin_B* 2c5p_B* 2c5o_B* 2i40_B* 2wev_B* 2wfy_B 2whb_B* 3eid_B* 3ej1_B* 3eoc_B* 2wha_B* 2x1n_B* 1vyw_B* ... Back     alignment and structure
Probab=100.00  E-value=5.2e-44  Score=349.28  Aligned_cols=247  Identities=19%  Similarity=0.238  Sum_probs=217.9

Q ss_pred             CCCcchHHHHHHHHhhhhCCCCCccc---cccHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHhcCCccccccCCC
Q 037214           10 EPLCEQKPSKFFGIEMHWMPAEGYAE---SNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGM   86 (455)
Q Consensus        10 ~~~~~E~l~~Lle~E~~~~p~~~yl~---~it~~~R~~LVdWL~eV~~~f~L~~eTl~LAV~yLDRFLs~~~V~~~~~~k   86 (455)
                      .+|.+|++.+|++.|.++.|.++|+.   ++++.||.++||||++|+..|+++++|+++||+|+|||++..++++     
T Consensus         4 ~eY~~di~~~l~~~E~~~~p~~~y~~~q~~i~~~~R~~lvdwl~~v~~~~~l~~~tl~lAv~~lDRfls~~~v~~-----   78 (260)
T 2cch_B            4 PDYHEDIHTYLREMEVKCKPKVGYMKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLR-----   78 (260)
T ss_dssp             CTTHHHHHHHHHHHHHHTCCCTTGGGGCSSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCCH-----
T ss_pred             HhHHHHHHHHHHHHHhhcCCCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccCCCCH-----
Confidence            47899999999999999999999998   8999999999999999999999999999999999999999999999     


Q ss_pred             ccchhhhHHHHHHHHhhhccCCCC-hhhhhhccCCceeecCCccccHHHHHHHHHHHHHhcCcccccCChHHHHHHHHHh
Q 037214           87 REDIVLAADACLTISWSVKSTSFS-YDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMRVATPISFVEFFVGI  165 (455)
Q Consensus        87 ~~~LQLvgvaCL~IASK~EE~~~P-l~dLqv~~s~~~~~td~~yt~~~eIl~ME~~IL~~L~w~L~~pTP~~FL~~fl~~  165 (455)
                       .++|++|+||||||||+||..+| +.|+       ++.+|+.|+ .++|.+||+.||++|+|+++.|||++|+.+|+..
T Consensus        79 -~~lqlv~~acl~iA~K~ee~~~~~~~d~-------~~i~~~~~~-~~~i~~mE~~iL~~L~~~l~~~tp~~fl~~~~~~  149 (260)
T 2cch_B           79 -GKLQLVGTAAMLLASKFEEIYPPEVAEF-------VYITDDTYT-KKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLH  149 (260)
T ss_dssp             -HHHHHHHHHHHHHHHHHHCSSCCCHHHH-------HHHTTSSSC-HHHHHHHHHHHHHHTTTCCCCCCHHHHHHHHHTT
T ss_pred             -HHHhHHHHHHHHHHHHhcccCCCCHHHH-------HHHHcCCcC-HHHHHHHHHHHHHHcCCccCCCCHHHHHHHHHHH
Confidence             89999999999999999999776 7886       344667777 4599999999999999999999999999999999


Q ss_pred             cCCCH-HHHHHHHHHHHHHHhcccc-ccCcChHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHcCCCCHHHHHHHHHHHH
Q 037214          166 IPIGR-GIKRRTLNEIVIQTQGDIS-FTRFLPTVIAASAVFTACRVLFNDQYYREKENMIRRVTKYVDEVDLEACLEDTC  243 (455)
Q Consensus       166 ~~~~~-~l~~~al~~LlelsL~d~~-fl~y~PS~IAAAAI~lA~~~l~~~~~~~w~~~Ll~~~s~yv~~~~L~~C~~~L~  243 (455)
                      ++.+. .+...+ +++++.++.++. +++|+||.||||||++|+..++...   |...+ .+++|+ ++++|.+|++.|.
T Consensus       150 l~~~~~~~~~~a-~~l~e~sl~~~~~~~~~~Ps~iAaAai~lA~~~~~~~~---w~~~l-~~~~g~-~~~~i~~~~~~l~  223 (260)
T 2cch_B          150 QQPANCKVESLA-MFLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQS---WPESL-IRKTGY-TLESLKPCLMDLH  223 (260)
T ss_dssp             CSSCCHHHHHHH-HHHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHSCC---SCHHH-HHHHCC-CHHHHHHHHHHHH
T ss_pred             cCCChHHHHHHH-HHHHHHHHHhHHHHhCCCHHHHHHHHHHHHHHHhCCCc---chHHH-HHHhCc-CHHHHHHHHHHHH
Confidence            98654 788888 999999999999 9999999999999999999998643   55666 778897 9999999999999


Q ss_pred             HHHHhhchhhhhhhchhHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 037214          244 KMCIEKQIMLERDLESADWKKLEEEINRRLETSSSSSSFNSISNRDEED  292 (455)
Q Consensus       244 ~l~~~~~~~~er~~~~~~~~kl~~~i~~r~~~~~sss~f~~is~~~e~~  292 (455)
                      +++......+                .+.+..|+++++|..+|..+.++
T Consensus       224 ~~~~~~~~~~----------------~~~i~~Ky~~~~~~~vs~~~~~~  256 (260)
T 2cch_B          224 QTYLKAPQHA----------------QQSIREKYKNSKYHGVSLLNPPE  256 (260)
T ss_dssp             HHHHHGGGSS----------------CCHHHHHHTSGGGTTGGGSCCCS
T ss_pred             HHHHhcCCcc----------------hHHHHHHHCcccccceeCCCCcc
Confidence            9886543221                12234578899999999977554
>2b9r_A Human cyclin B1; cell cycle; 2.90A {Homo sapiens} PDB: 2jgz_B* Back     alignment and structure
>2f2c_A Cyclin homolog, V-cyclin; small molecule inhibitor bound between N-terminal and C-TERM domain of kinase, cell cycle-transferase complex; HET: AP9; 2.80A {Herpesvirus saimiri} SCOP: a.74.1.1 a.74.1.1 PDB: 1jow_A* 2euf_A* 1xo2_A* 1bu2_A Back     alignment and structure
>1g3n_C V-cyclin; cyclin-dependent kinase, INK4 inhibitor, viral cyclin, cell cycle, signaling protein; 2.90A {Human herpesvirus 8} SCOP: a.74.1.1 a.74.1.1 Back     alignment and structure
>3g33_B CCND3 protein; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Back     alignment and structure
>1f5q_B Gamma herpesvirus cyclin; herpesviral cyclin, cyclin dependent kinase. protein/protein complex, transferase; 2.50A {Murid herpesvirus 4} SCOP: a.74.1.1 a.74.1.1 Back     alignment and structure
>2w96_A G1/S-specific cyclin-D1; serine/threonine-protein kinase, chromosomal rearrangement, ATP-binding, transferase, polymorphism, cell division; 2.30A {Homo sapiens} PDB: 2w99_A 2w9f_A 2w9z_A Back     alignment and structure
>1w98_B Cyclin E, G1/S-specific cyclin E1; cell cycle, transferase; HET: TPO; 2.15A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 Back     alignment and structure
>2i53_A Cyclin K; cell cycle, transcription, cyclin BOX, CDK9, positive transcription elongation factor, P-TEFB; 1.50A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 Back     alignment and structure
>2ivx_A Cyclin-T2; transcription regulation, cell division, phosphorylation, NU protein, cell cycle, transcription; 1.8A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_A 3mi9_B* 3mia_B* 3tnh_B* 3tni_B* 3blh_B* 3blq_B* 3blr_B* 3lq5_B* 3my1_B* 3tn8_B* Back     alignment and structure
>3rgf_B Cyclin-C; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Back     alignment and structure
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C Back     alignment and structure
>1zp2_A RNA polymerase II holoenzyme cyclin-like subunit; cyclin repeat domains, transcription-cell cycle complex; 3.00A {Schizosaccharomyces pombe} Back     alignment and structure
>1jkw_A Cyclin H; cell cycle, cell division, nuclear protein; 2.60A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 1kxu_A Back     alignment and structure
>1c9b_A General transcription factor IIB; protein-DNA complex, cyclin-like fold, helix-turn-helix, transcription/DNA complex; 2.65A {Homo sapiens} SCOP: a.74.1.2 a.74.1.2 PDB: 1tfb_A 2phg_A 1vol_A* Back     alignment and structure
>1ais_B TFB TFIIB, protein (transcription initiation factor IIB); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: a.74.1.2 a.74.1.2 PDB: 1d3u_B* Back     alignment and structure
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae} Back     alignment and structure
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M Back     alignment and structure
>2pmi_B PHO85 cyclin PHO80, aminoglycoside anti; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_B* Back     alignment and structure
>1ais_B TFB TFIIB, protein (transcription initiation factor IIB); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: a.74.1.2 a.74.1.2 PDB: 1d3u_B* Back     alignment and structure
>1c9b_A General transcription factor IIB; protein-DNA complex, cyclin-like fold, helix-turn-helix, transcription/DNA complex; 2.65A {Homo sapiens} SCOP: a.74.1.2 a.74.1.2 PDB: 1tfb_A 2phg_A 1vol_A* Back     alignment and structure
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M Back     alignment and structure
>1zp2_A RNA polymerase II holoenzyme cyclin-like subunit; cyclin repeat domains, transcription-cell cycle complex; 3.00A {Schizosaccharomyces pombe} Back     alignment and structure
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 455
d2cchb1128 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [T 6e-07
d1g3nc1132 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma 3e-05
d1f5qb1141 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesviru 5e-05
d2ivxa1143 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) 1e-04
d1jkwa1151 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo s 3e-04
d1bu2a1127 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saim 4e-04
d2i53a1144 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) 5e-04
d1w98b2140 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human 7e-04
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId: 9913]} Length = 128 Back     information, alignment and structure

class: All alpha proteins
fold: Cyclin-like
superfamily: Cyclin-like
family: Cyclin
domain: Cyclin A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.1 bits (109), Expect = 6e-07
 Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 18/132 (13%)

Query: 24  EMHWMPAEGYAESNKE---SLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVP 80
           E+   P  GY +   +   S+R I +  ++++ +   L     + A+N  DRF+S   V 
Sbjct: 10  EVKCKPKVGYMKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSV- 68

Query: 81  RMLGGMREDIVLAADACLTI-SWSVKSTSFSYDEFLEADNHEYKDTDARVVRKVQLVAME 139
                +R  + L   A + + S   +       EF+   +  Y         K Q++ ME
Sbjct: 69  -----LRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYT--------KKQVLRME 115

Query: 140 QKIDVGVDWRMR 151
             +   + + + 
Sbjct: 116 HLVLKVLTFDLA 127
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]} Length = 132 Back     information, alignment and structure
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]} Length = 141 Back     information, alignment and structure
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} Length = 143 Back     information, alignment and structure
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]} Length = 151 Back     information, alignment and structure
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]} Length = 127 Back     information, alignment and structure
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]} Length = 144 Back     information, alignment and structure
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]} Length = 140 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query455
d1g3nc1132 Viral cyclin {Kaposi's sarcoma-associated herpesvi 99.96
d2cchb1128 Cyclin A {Cow (Bos taurus) [TaxId: 9913]} 99.95
d1w98b2140 G1/S-specific cyclin-E1 {Human (Homo sapiens) [Tax 99.95
d1bu2a1127 Viral cyclin {Herpesvirus saimiri [TaxId: 10381]} 99.94
d1f5qb1141 Viral cyclin {Murine herpesvirus 68 [TaxId: 33708] 99.92
d2i53a1144 Cyclin K {Human (Homo sapiens) [TaxId: 9606]} 99.77
d1jkwa1151 Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606 99.74
d2ivxa1143 Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} 99.71
d2cchb2124 Cyclin A {Cow (Bos taurus) [TaxId: 9913]} 99.64
d2ivxa2113 Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} 98.44
d2i53a2110 Cyclin K {Human (Homo sapiens) [TaxId: 9606]} 98.23
d1aisb295 Transcription factor IIB (TFIIB), core domain {Arc 97.89
d1w98b1130 G1/S-specific cyclin-E1 {Human (Homo sapiens) [Tax 97.84
d1vola2109 Transcription factor IIB (TFIIB), core domain {Hum 97.75
d1vola195 Transcription factor IIB (TFIIB), core domain {Hum 97.41
d1jkwa2126 Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606 97.38
d1aisb198 Transcription factor IIB (TFIIB), core domain {Arc 97.12
d1aisb198 Transcription factor IIB (TFIIB), core domain {Arc 96.99
d1vola195 Transcription factor IIB (TFIIB), core domain {Hum 96.75
d1aisb295 Transcription factor IIB (TFIIB), core domain {Arc 96.52
d1vola2109 Transcription factor IIB (TFIIB), core domain {Hum 95.03
d2ivxa2113 Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} 91.65
d2i53a1144 Cyclin K {Human (Homo sapiens) [TaxId: 9606]} 84.41
d2ivxa1143 Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} 83.11
d2i53a2110 Cyclin K {Human (Homo sapiens) [TaxId: 9606]} 82.74
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]} Back     information, alignment and structure
class: All alpha proteins
fold: Cyclin-like
superfamily: Cyclin-like
family: Cyclin
domain: Viral cyclin
species: Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]

Probab=99.96  E-value=2.4e-29  Score=221.05  Aligned_cols=125  Identities=17%  Similarity=0.297  Sum_probs=114.4

Q ss_pred             cchHHHHHHHHhhhhCCCCCccc----cccHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHhcCCccccccCCCcc
Q 037214           13 CEQKPSKFFGIEMHWMPAEGYAE----SNKESLRKIAMHQILQISKSNNLDAMIPYAAMNIFDRFISRNEVPRMLGGMRE   88 (455)
Q Consensus        13 ~~E~l~~Lle~E~~~~p~~~yl~----~it~~~R~~LVdWL~eV~~~f~L~~eTl~LAV~yLDRFLs~~~V~~~~~~k~~   88 (455)
                      +++++++|++.|.+++|+++|+.    ++++.+|.++||||.+|+..++++++|+|+||+|||||+++..+++      .
T Consensus         3 ~~~i~~~l~~~E~~~~p~~~y~~~~q~~it~~~R~~lidWl~~v~~~~~l~~et~~lAv~llDrfls~~~v~~------~   76 (132)
T d1g3nc1           3 EDRIFYNILEIEPRFLTSDSVFGTFQQSLTSHMRKLLGTWMFSVCQEYNLEPNVVALALNLLDRLLLIKQVSK------E   76 (132)
T ss_dssp             HHHHHHHHHHHGGGGCCCGGGHHHHTSSCCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTTTCCCCH------H
T ss_pred             hHHHHHHHHHHHHHHCCChHHHHhcCccCCHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCcccCcH------H
Confidence            46799999999999999999986    7999999999999999999999999999999999999999999999      9


Q ss_pred             chhhhHHHHHHHHhhhccCCCC-hhhhhhccCCceeecCCccccHHHHHHHHHHHHHhcCcccc
Q 037214           89 DIVLAADACLTISWSVKSTSFS-YDEFLEADNHEYKDTDARVVRKVQLVAMEQKIDVGVDWRMR  151 (455)
Q Consensus        89 ~LQLvgvaCL~IASK~EE~~~P-l~dLqv~~s~~~~~td~~yt~~~eIl~ME~~IL~~L~w~L~  151 (455)
                      ++|++|+||||||||+||..+| +.++       +..+++.|+ .++|.+||..||++|+|++.
T Consensus        77 ~lqLia~tcl~iAsK~ee~~~~~~~~l-------~~~~~~~~t-~~ei~~mE~~IL~~L~w~l~  132 (132)
T d1g3nc1          77 HFQKTGSACLLVASKLRSLTPISTSSL-------CYAAADSFS-RQELIDQEKELLEKLAWRTE  132 (132)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCCCHHHH-------HHHTTTCSC-HHHHHHHHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCHHHH-------HHHHcCCCC-HHHHHHHHHHHHHHcCCcCC
Confidence            9999999999999999999876 6775       444666777 45999999999999999973
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]} Back     information, alignment and structure
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]} Back     information, alignment and structure
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cchb2 a.74.1.1 (B:309-432) Cyclin A {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1w98b1 a.74.1.1 (B:228-357) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jkwa2 a.74.1.1 (A:162-287) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure