Citrus Sinensis ID: 037264

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
GDFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVDRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC
ccEEEEEEEEcccccccEEEEcccccccccccccEEEEcccccccHHHHccccccEEEcccccccccEEEEEccccccccEEcccccccccccEEEEEEEEEEEccEEEcccccccEEcccccccEEEccccccEEccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEccccEEEEccccEEEEEccccEEEEEEEccccccEEEEHHHcEEcEEEEEccccEEEEEEccc
ccccEEEEEEcccccccEEEEEcccccccccccccEEEccccccccHHHcccccEEEEEcccccccccEEEEccccccccEEcccccccccccEEEEEEEEEEEccEEEcccHHHEEEccccccEEEEEcccEEEcccHHHHHHHHHHHHHHHcccccccccccccccEccccccccEccEEEEEEccccEEEcccccEEEEcccccEEEEEEEcccccEEEEEEEEcccEEEEEEccccEEEEccccc
GDFVTETVTlgsasvdniaigcghnneglfVGAAgllglgggslsfpsqinastfsyclvdrdsdststlefdsslppnavtapllrnheldtfYYLGLTGisvggdllpisetafkidesgnggiivdsGTAVTRLQTETYNALRDAFVRgtralsptdgvalfdtcydfssrssvevptvsfhfpegkvlplpaknylipvdsngtfcfafaptssslsIIGNVQQQGTRVSFNLrnsligftpnkc
GDFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVDRDSDSTStlefdsslppnavTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRgtralsptdgVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFnlrnsligftpnkc
GDFVTETVTLGSASVDNIAIGCGHNNEglfvgaagllglgggslsfPSQINASTFSYCLVDRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC
*****ETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVD******************AVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGF*****
GDFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVDRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRA*****GVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC
GDFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVDRD***********SLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC
*DFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVDRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GDFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLVDRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query249 2.2.26 [Sep-21-2011]
Q9LS40500 Protein ASPARTIC PROTEASE no no 1.0 0.498 0.626 2e-79
Q9LHE3470 Protein ASPARTIC PROTEASE no no 1.0 0.529 0.525 5e-58
Q766C2438 Aspartic proteinase nepen N/A no 0.991 0.563 0.396 1e-40
Q766C3437 Aspartic proteinase nepen N/A no 0.983 0.560 0.396 1e-40
Q6XBF8437 Aspartic proteinase CDR1 no no 0.967 0.551 0.368 4e-22
Q9LZL3453 Aspartic proteinase PCS1 no no 0.995 0.547 0.328 1e-18
Q3EBM5447 Probable aspartic proteas no no 0.971 0.541 0.309 5e-15
Q9LX20528 Aspartic proteinase-like no no 0.891 0.420 0.264 2e-10
Q9S9K4475 Aspartic proteinase-like no no 0.939 0.492 0.240 6e-10
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function desciption
 Score =  295 bits (755), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 158/252 (62%), Positives = 203/252 (80%), Gaps = 3/252 (1%)

Query: 1   GDFVTETVTLG-SASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCL 59
           G+  T+TVT G S  ++N+A+GCGH+NEGLF GAAGLLGLGGG LS  +Q+ A++FSYCL
Sbjct: 249 GELATDTVTFGNSGKINNVALGCGHDNEGLFTGAAGLLGLGGGVLSITNQMKATSFSYCL 308

Query: 60  VDRDSDSTSTLEFDS-SLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKI 118
           VDRDS  +S+L+F+S  L     TAPLLRN ++DTFYY+GL+G SVGG+ + + +  F +
Sbjct: 309 VDRDSGKSSSLDFNSVQLGGGDATAPLLRNKKIDTFYYVGLSGFSVGGEKVVLPDAIFDV 368

Query: 119 DESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSP-TDGVALFDTCYDFSSRSSV 177
           D SG+GG+I+D GTAVTRLQT+ YN+LRDAF++ T  L   +  ++LFDTCYDFSS S+V
Sbjct: 369 DASGSGGVILDCGTAVTRLQTQAYNSLRDAFLKLTVNLKKGSSSISLFDTCYDFSSLSTV 428

Query: 178 EVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNL 237
           +VPTV+FHF  GK L LPAKNYLIPVD +GTFCFAFAPTSSSLSIIGNVQQQGTR++++L
Sbjct: 429 KVPTVAFHFTGGKSLDLPAKNYLIPVDDSGTFCFAFAPTSSSLSIIGNVQQQGTRITYDL 488

Query: 238 RNSLIGFTPNKC 249
             ++IG + NKC
Sbjct: 489 SKNVIGLSGNKC 500
Aspartic protease involved in drought avoidance through abscisic acid signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
224111722 484 predicted protein [Populus trichocarpa] 1.0 0.514 0.807 1e-108
255576511 479 Aspartic proteinase nepenthesin-1 precur 1.0 0.519 0.799 1e-106
225423917 491 PREDICTED: aspartic proteinase nepenthes 1.0 0.507 0.788 1e-102
449434646 486 PREDICTED: protein ASPARTIC PROTEASE IN 1.0 0.512 0.787 1e-100
449530542 486 PREDICTED: LOW QUALITY PROTEIN: protein 1.0 0.512 0.787 1e-100
15222611 483 aspartyl protease-like protein [Arabidop 1.0 0.515 0.734 3e-98
297845610 486 aspartyl protease family protein [Arabid 1.0 0.512 0.730 7e-98
356498306 484 PREDICTED: aspartic proteinase nepenthes 1.0 0.514 0.746 1e-96
356502456 484 PREDICTED: aspartic proteinase nepenthes 1.0 0.514 0.742 3e-96
118484458 499 unknown [Populus trichocarpa] 1.0 0.498 0.681 2e-87
>gi|224111722|ref|XP_002315953.1| predicted protein [Populus trichocarpa] gi|222864993|gb|EEF02124.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/249 (80%), Positives = 231/249 (92%)

Query: 1   GDFVTETVTLGSASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINASTFSYCLV 60
           GDFVTET+TLGSA VDN+AIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINA++FSYCLV
Sbjct: 236 GDFVTETITLGSAPVDNVAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINATSFSYCLV 295

Query: 61  DRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 120
           DRDS+S STLEF+S+LPPNAV+APLLRNH LDTFYY+GLTG+SVGG+L+ I E+AF+IDE
Sbjct: 296 DRDSESASTLEFNSTLPPNAVSAPLLRNHHLDTFYYVGLTGLSVGGELVSIPESAFQIDE 355

Query: 121 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVP 180
           SGNGG+IVDSGTA+TRLQT+ YN+LRDAFV+ TR L  T+G+ALFDTCYD SS+ +VEVP
Sbjct: 356 SGNGGVIVDSGTAITRLQTDVYNSLRDAFVKRTRDLPSTNGIALFDTCYDLSSKGNVEVP 415

Query: 181 TVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNS 240
           TVSFHFP+GK LPLPAKNYL+P+DS GTFCFAFAPT+SSLSIIGNVQQQGTRV ++L N 
Sbjct: 416 TVSFHFPDGKELPLPAKNYLVPLDSEGTFCFAFAPTASSLSIIGNVQQQGTRVVYDLVNH 475

Query: 241 LIGFTPNKC 249
           L+GF PNKC
Sbjct: 476 LVGFVPNKC 484

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255576511|ref|XP_002529147.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223531426|gb|EEF33260.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225423917|ref|XP_002281973.1| PREDICTED: aspartic proteinase nepenthesin-2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449434646|ref|XP_004135107.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449530542|ref|XP_004172253.1| PREDICTED: LOW QUALITY PROTEIN: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15222611|ref|NP_173922.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|12321511|gb|AAG50814.1|AC079281_16 hypothetical protein [Arabidopsis thaliana] gi|20466516|gb|AAM20575.1| unknown protein [Arabidopsis thaliana] gi|23198172|gb|AAN15613.1| unknown protein [Arabidopsis thaliana] gi|110736960|dbj|BAF00436.1| hypothetical protein [Arabidopsis thaliana] gi|332192515|gb|AEE30636.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297845610|ref|XP_002890686.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297336528|gb|EFH66945.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356498306|ref|XP_003517994.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|356502456|ref|XP_003520035.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|118484458|gb|ABK94105.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 1.0 0.515 0.670 5.1e-90
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 1.0 0.498 0.563 2.8e-73
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.995 0.513 0.505 3.9e-60
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 1.0 0.529 0.466 4e-58
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.995 0.511 0.486 5.9e-57
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.979 0.529 0.339 2e-31
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.971 0.510 0.343 1.4e-28
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.975 0.523 0.320 7.9e-28
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.967 0.551 0.338 9.4e-27
TAIR|locus:2077700535 AT3G59080 "AT3G59080" [Arabido 0.987 0.459 0.306 2.1e-26
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
 Identities = 167/249 (67%), Positives = 205/249 (82%)

Query:     1 GDFVTETVTLGSASVDNIAIGCGHNNEXXXXXXXXXXXXXXXXXXXPSQINASTFSYCLV 60
             GDF TET+T+GS  V N+A+GCGH+NE                   PSQ+N ++FSYCLV
Sbjct:   235 GDFATETLTIGSTLVQNVAVGCGHSNEGLFVGAAGLLGLGGGLLALPSQLNTTSFSYCLV 294

Query:    61 DRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDE 120
             DRDSDS ST++F +SL P+AV APLLRNH+LDTFYYLGLTGISVGG+LL I +++F++DE
Sbjct:   295 DRDSDSASTVDFGTSLSPDAVVAPLLRNHQLDTFYYLGLTGISVGGELLQIPQSSFEMDE 354

Query:   121 SGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVP 180
             SG+GGII+DSGTAVTRLQTE YN+LRD+FV+GT  L    GVA+FDTCY+ S++++VEVP
Sbjct:   355 SGSGGIIIDSGTAVTRLQTEIYNSLRDSFVKGTLDLEKAAGVAMFDTCYNLSAKTTVEVP 414

Query:   181 TVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTSSSLSIIGNVQQQGTRVSFNLRNS 240
             TV+FHFP GK+L LPAKNY+IPVDS GTFC AFAPT+SSL+IIGNVQQQGTRV+F+L NS
Sbjct:   415 TVAFHFPGGKMLALPAKNYMIPVDSVGTFCLAFAPTASSLAIIGNVQQQGTRVTFDLANS 474

Query:   241 LIGFTPNKC 249
             LIGF+ NKC
Sbjct:   475 LIGFSSNKC 483
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077700 AT3G59080 "AT3G59080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-110
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-64
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-43
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 2e-24
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-23
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 2e-08
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 9e-07
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-06
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-05
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 5e-04
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
 Score =  317 bits (815), Expect = e-110
 Identities = 134/257 (52%), Positives = 155/257 (60%), Gaps = 13/257 (5%)

Query: 1   GDFVTETVTLG-SASVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQINAST---FS 56
           GD  T+T+TLG S  V   A GCGH+NEGLF GAAGLLGLG G LS PSQ  +S    FS
Sbjct: 48  GDLATDTLTLGSSDVVPGFAFGCGHDNEGLFGGAAGLLGLGRGKLSLPSQTASSYGGVFS 107

Query: 57  YCLVDRDSDSTSTLEF--DSSLPPNAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISET 114
           YCL DR S S+  L F   +S+P  A   P+L N  + TFYY+GLTGISVGG  LPI   
Sbjct: 108 YCLPDRSSSSSGYLSFGAAASVPAGASFTPMLSNPRVPTFYYVGLTGISVGGRRLPIPPA 167

Query: 115 AFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTRALSPTDGVALFDTCYDFSSR 174
           +F     G GG+I+DSGT +TRL    Y ALRDAF     A     G ++ DTCYD S  
Sbjct: 168 SF-----GAGGVIIDSGTVITRLPPSAYAALRDAFRAAMAAYPRAPGFSILDTCYDLSGF 222

Query: 175 SSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTS--SSLSIIGNVQQQGTR 232
            SV VPTVS HF  G  + L A   L PVD +   C AFA TS    LSIIGNVQQQ  R
Sbjct: 223 RSVSVPTVSLHFQGGADVELDASGVLYPVDDSSQVCLAFAGTSDDGGLSIIGNVQQQTFR 282

Query: 233 VSFNLRNSLIGFTPNKC 249
           V +++    IGF P  C
Sbjct: 283 VVYDVAGGRIGFAPGGC 299

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 299
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 249
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.97
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.43
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 97.84
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 96.67
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.27
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 96.03
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 95.48
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.5
PF1365090 Asp_protease_2: Aspartyl protease 91.4
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 89.35
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 87.07
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 86.38
cd0609489 RP_Saci_like RP_Saci_like, retropepsin family. Ret 86.16
COG3577215 Predicted aspartyl protease [General function pred 81.55
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
Probab=100.00  E-value=8.9e-50  Score=340.16  Aligned_cols=244  Identities=53%  Similarity=0.881  Sum_probs=203.8

Q ss_pred             CceEEEEEEeCCc-cccceEEeeeecCCCCcCCcceeeecCCCCCccccccc---CCeeeEeeeCCCCCCcceeeeCCCC
Q 037264            1 GDFVTETVTLGSA-SVDNIAIGCGHNNEGLFVGAAGLLGLGGGSLSFPSQIN---ASTFSYCLVDRDSDSTSTLEFDSSL   76 (249)
Q Consensus         1 G~~~~D~v~ig~~-~~~~~~Fg~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~---~~~Fs~~l~~~~~~~~G~l~~Gg~d   76 (249)
                      |.+++|+|+|++. +++++.|||++.+++.+...+||||||++.+|++.|+.   +++||+||.+......|+|+||++|
T Consensus        48 G~~~~D~v~ig~~~~~~~~~Fg~~~~~~~~~~~~~GilGLg~~~~s~~~ql~~~~~~~FS~~L~~~~~~~~G~l~fGg~d  127 (299)
T cd05472          48 GDLATDTLTLGSSDVVPGFAFGCGHDNEGLFGGAAGLLGLGRGKLSLPSQTASSYGGVFSYCLPDRSSSSSGYLSFGAAA  127 (299)
T ss_pred             EEEEEEEEEeCCCCccCCEEEECCccCCCccCCCCEEEECCCCcchHHHHhhHhhcCceEEEccCCCCCCCceEEeCCcc
Confidence            6899999999998 89999999999988877678999999999999999876   6899999987432458999999999


Q ss_pred             CC--CCeeeccccCCCCCcceEeeeceEEECCeeeccCccceeeccCCCCceEEcccCceeeeCHHHHHHHHHHHHHhhc
Q 037264           77 PP--NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRGTR  154 (249)
Q Consensus        77 ~~--~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~  154 (249)
                      +.  ++.|+|++.++....+|.|++++|+|+++.+..++..     .....+|||||||+++||+++|++|.+++.+...
T Consensus       128 ~~~g~l~~~pv~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~-----~~~~~~ivDSGTt~~~lp~~~~~~l~~~l~~~~~  202 (299)
T cd05472         128 SVPAGASFTPMLSNPRVPTFYYVGLTGISVGGRRLPIPPAS-----FGAGGVIIDSGTVITRLPPSAYAALRDAFRAAMA  202 (299)
T ss_pred             ccCCCceECCCccCCCCCCeEEEeeEEEEECCEECCCCccc-----cCCCCeEEeCCCcceecCHHHHHHHHHHHHHHhc
Confidence            84  9999999987544578999999999999988654321     1245789999999999999999999999987654


Q ss_pred             cCCCCCcccccccccccccCCcccCCeEEEEeCCCcEEEeCCCceEEEecCCCcEEEEEEcCC--CCceeeehhhccccE
Q 037264          155 ALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFAFAPTS--SSLSIIGNVQQQGTR  232 (249)
Q Consensus       155 ~~~~~~~~~~~~~C~~~~~~~~~~~p~i~~~f~~g~~~~i~~~~y~~~~~~~~~~C~~~~~~~--~~~~ilG~~fl~~~y  232 (249)
                      ..++......++.|+..++.....+|+|+|+|.++++++|+|++|+++....+..|+++...+  .+.||||+.|||++|
T Consensus       203 ~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~~g~~~~l~~~~y~~~~~~~~~~C~~~~~~~~~~~~~ilG~~fl~~~~  282 (299)
T cd05472         203 AYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGADVELDASGVLYPVDDSSQVCLAFAGTSDDGGLSIIGNVQQQTFR  282 (299)
T ss_pred             cCCCCCCCCCCCccCcCCCCcCCccCCEEEEECCCCEEEeCcccEEEEecCCCCEEEEEeCCCCCCCCEEEchHHccceE
Confidence            333323333454698765555568999999996589999999999995444568899877653  467999999999999


Q ss_pred             EEEeCCCCEEEEeeCCC
Q 037264          233 VSFNLRNSLIGFTPNKC  249 (249)
Q Consensus       233 ~vfD~~~~riGfa~~~C  249 (249)
                      +|||++++|||||+++|
T Consensus       283 vvfD~~~~~igfa~~~C  299 (299)
T cd05472         283 VVYDVAGGRIGFAPGGC  299 (299)
T ss_pred             EEEECCCCEEeEecCCC
Confidence            99999999999999999

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This fami
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd06094 RP_Saci_like RP_Saci_like, retropepsin family Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
3vla_A413 Crystal Structure Of Edgp Length = 413 1e-07
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 1e-07
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 8e-06
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 3e-05
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 2e-04
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 95  YYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVR--G 152
           Y++G+  I +   ++ ++ +   I  +G GG  + +    T L+T  Y A+ +AF++   
Sbjct: 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA 296
Query: 153 TRALSPTDGVALFDTCYD----FSSRSSVEVPTVSFHFP-EGKVLPLPAKNYLIPVDSNG 207
            R ++    VA F  C+      S+R    VP++      E  V  +   N ++ ++ N 
Sbjct: 297 ARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDN- 355
Query: 208 TFCFAFAPTSSSLS---IIGNVQQQGTRVSFNLRNSLIGFT 245
             C       S+L    +IG  Q +   V F+L  S +GF+
Sbjct: 356 VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFS 396
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 3e-58
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 1e-52
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-48
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-12
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 3e-12
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 4e-12
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 6e-11
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-10
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 8e-10
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 2e-09
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 5e-09
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 5e-09
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 7e-09
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 2e-08
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-08
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 6e-08
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 4e-07
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-07
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 5e-07
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-06
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-06
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 2e-06
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-06
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-06
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 3e-06
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 5e-06
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 6e-06
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 7e-06
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 1e-05
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 7e-05
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  189 bits (480), Expect = 3e-58
 Identities = 47/280 (16%), Positives = 99/280 (35%), Gaps = 32/280 (11%)

Query: 1   GDFVTETVTLGS-----------ASVDNIAIGCGHN---NEGLFVGAAGLLGLGGGSLSF 46
           G+   + + + +            +V      C  +    +GL     G+ GLG   +S 
Sbjct: 109 GELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISL 168

Query: 47  PSQINAS-----TFSYCLVDRDSDSTSTLEFDSSLPPNAVTAPLLRNHELDT-------- 93
           P+Q+ +       F+ CL    +   + +  D+           + +    T        
Sbjct: 169 PNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQG 228

Query: 94  FYYLGLTGISVGG-DLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAFVRG 152
            Y + +  I +    + P+++ +  I  S +GG ++ + T    LQ   Y A    F + 
Sbjct: 229 EYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQ 288

Query: 153 TRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCFA 212
               +    VA F  C++ +  ++     +    P G V  +  ++ ++     G  C  
Sbjct: 289 LPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLG 347

Query: 213 FAPTSS---SLSIIGNVQQQGTRVSFNLRNSLIGFTPNKC 249
                    +   +G  Q +   V F+L  S +GF+ +  
Sbjct: 348 VMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.93
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.8
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 96.14
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 95.81
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=5.4e-49  Score=347.33  Aligned_cols=245  Identities=22%  Similarity=0.477  Sum_probs=204.1

Q ss_pred             CceEEEEEEeC---------CccccceEEeeeecC--CCCcCCcceeeecCCCCCccccccc-----CCeeeEeeeCCCC
Q 037264            1 GDFVTETVTLG---------SASVDNIAIGCGHNN--EGLFVGAAGLLGLGGGSLSFPSQIN-----ASTFSYCLVDRDS   64 (249)
Q Consensus         1 G~~~~D~v~ig---------~~~~~~~~Fg~~~~~--~~~~~~~~GIlGLg~~~~s~~~ql~-----~~~Fs~~l~~~~~   64 (249)
                      |.|++|+|+|+         +++++++.|||++.+  .+.+..++||||||++++|+++||.     +++||+||.+. .
T Consensus       108 G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~-~  186 (413)
T 3vla_A          108 GEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS-T  186 (413)
T ss_dssp             EEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC-S
T ss_pred             eEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC-C
Confidence            68999999997         257889999999986  4556678999999999999999987     49999999874 2


Q ss_pred             CCcceeeeCCCCC--------C-C-CeeeccccCCCC----------CcceEeeeceEEECCeeeccCccceeeccCCCC
Q 037264           65 DSTSTLEFDSSLP--------P-N-AVTAPLLRNHEL----------DTFYYLGLTGISVGGDLLPISETAFKIDESGNG  124 (249)
Q Consensus        65 ~~~G~l~~Gg~d~--------~-~-~~~~p~~~~~~~----------~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~  124 (249)
                      ..+|+|+||++|.        . + +.|+|++.++..          ..+|.|.|++|+||++.+.+++..++.++++.+
T Consensus       187 ~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~  266 (413)
T 3vla_A          187 SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLG  266 (413)
T ss_dssp             SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCB
T ss_pred             CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCC
Confidence            4589999999985        1 5 999999987532          269999999999999999888877777666678


Q ss_pred             ceEEcccCceeeeCHHHHHHHHHHHHHhhc--cCCCCCcccccccccccccCC----cccCCeEEEEeCC-CcEEEeCCC
Q 037264          125 GIIVDSGTAVTRLQTETYNALRDAFVRGTR--ALSPTDGVALFDTCYDFSSRS----SVEVPTVSFHFPE-GKVLPLPAK  197 (249)
Q Consensus       125 ~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~C~~~~~~~----~~~~p~i~~~f~~-g~~~~i~~~  197 (249)
                      ++||||||++++||+++|++|.++|.++..  ++++..+...+..|+..+...    +..+|+|+|+|.+ ++.|+|+++
T Consensus       267 ~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~  346 (413)
T 3vla_A          267 GTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGS  346 (413)
T ss_dssp             CEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHH
T ss_pred             CEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCcc
Confidence            899999999999999999999999988764  343333334467999875332    2479999999954 389999999


Q ss_pred             ceEEEecCCCcEEEEEEcCC---CCceeeehhhccccEEEEeCCCCEEEEeeC
Q 037264          198 NYLIPVDSNGTFCFAFAPTS---SSLSIIGNVQQQGTRVSFNLRNSLIGFTPN  247 (249)
Q Consensus       198 ~y~~~~~~~~~~C~~~~~~~---~~~~ilG~~fl~~~y~vfD~~~~riGfa~~  247 (249)
                      +|+++.. ++.+|+++...+   .+.||||+.|||++|+|||++|+|||||++
T Consensus       347 ~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~  398 (413)
T 3vla_A          347 NSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGT  398 (413)
T ss_dssp             HHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             ceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence            9999876 567899977653   268999999999999999999999999985
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 249
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-28
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-23
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-19
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 3e-19
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 4e-18
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 4e-18
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 7e-18
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 1e-17
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 4e-17
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 9e-17
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 1e-16
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-16
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 2e-15
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 3e-15
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 6e-15
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-14
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 5e-14
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 6e-14
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-12
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 3e-12
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 4e-12
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 3e-10
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  109 bits (272), Expect = 1e-28
 Identities = 54/282 (19%), Positives = 91/282 (32%), Gaps = 43/282 (15%)

Query: 1   GDFVTETVTLGSAS--------VDNIAIGCGHNNE--GLFVGAAGLLGLGGGSLSFPSQI 50
           G          +             +   C  +     L  G+ G+ GL    L+ P+Q+
Sbjct: 95  GSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQV 154

Query: 51  NAST---FSYCLVDRDSDSTSTLEFDSSLPPNAVTAPL----LRNHELDTFYYLGLTGIS 103
            ++      + L          +     +P    T  +    L        +Y+    I 
Sbjct: 155 ASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIV 214

Query: 104 VGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTETYNALRDAF--------VRGTRA 155
           VG   +P+ E A        GG+++ +      L+ + Y  L DAF          G   
Sbjct: 215 VGDTRVPVPEGAL-----ATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPV 269

Query: 156 LSPTDGVALFDTCYDFS----SRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCF 211
               + VA F  CYD      +     VP V      G    +  KN ++ V   GT C 
Sbjct: 270 ARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK-QGTACV 328

Query: 212 AFAPT--------SSSLSIIGNVQQQGTRVSFNLRNSLIGFT 245
           AF            +   I+G  Q +   + F++    +GF+
Sbjct: 329 AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} Length = 330 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.98
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.97
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.97
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=1.7e-39  Score=276.45  Aligned_cols=219  Identities=19%  Similarity=0.298  Sum_probs=177.7

Q ss_pred             CceEEEEEEeCCccccceEEeeeecCCCCc--CCcceeeecCCCCCcccc-------c------ccCCeeeEeeeCCCCC
Q 037264            1 GDFVTETVTLGSASVDNIAIGCGHNNEGLF--VGAAGLLGLGGGSLSFPS-------Q------INASTFSYCLVDRDSD   65 (249)
Q Consensus         1 G~~~~D~v~ig~~~~~~~~Fg~~~~~~~~~--~~~~GIlGLg~~~~s~~~-------q------l~~~~Fs~~l~~~~~~   65 (249)
                      |.+++|++++++.+++++.|+++.......  ...+||+|||+..++...       +      +.+++||+||.+....
T Consensus        85 G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GilGlg~~~~~~~~~~~~~~~~l~~~g~i~~~~fs~~l~~~~~~  164 (325)
T d2apra_          85 GILAKDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNG  164 (325)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGT
T ss_pred             EEEEeeeEEeeeeeccCcceeeeeeecccccccccCcccccccccccccccCCcchhHHHhhccccceeEEEEeccCCCC
Confidence            678999999999999999999999875432  247899999987554322       2      2278999999876545


Q ss_pred             CcceeeeCCCCCC----CCeeeccccCCCCCcceEeeeceEEECCeeeccCccceeeccCCCCceEEcccCceeeeCHHH
Q 037264           66 STSTLEFDSSLPP----NAVTAPLLRNHELDTFYYLGLTGISVGGDLLPISETAFKIDESGNGGIIVDSGTAVTRLQTET  141 (249)
Q Consensus        66 ~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~  141 (249)
                      ..|.|+||++|+.    +++|+|+....   .+|.|.++++.+++..+...           ..++|||||++++||+++
T Consensus       165 ~~g~l~~Gg~d~~~~~~~~~~~~~~~~~---~~~~v~l~~i~i~~~~~~~~-----------~~~iiDSGt~~~~lp~~~  230 (325)
T d2apra_         165 GGGEYIFGGYDSTKFKGSLTTVPIDNSR---GWWGITVDRATVGTSTVASS-----------FDGILDTGTTLLILPNNI  230 (325)
T ss_dssp             CCEEEEETCCCGGGBCSCCEEEECBCTT---SSCEEEECEEEETTEEEECC-----------EEEEECTTCSSEEEEHHH
T ss_pred             CCeEEEecCCCchhhccceeeEeecCCC---ceEEEEEeeEEECCEeecce-----------eeeeccCCCccccCCHHH
Confidence            5799999999997    89999997653   68999999999999887432           246999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCcccccccccccccCCcccCCeEEEEeCCCcEEEeCCCceEEEecCCCcEEE-EEEcCCCCc
Q 037264          142 YNALRDAFVRGTRALSPTDGVALFDTCYDFSSRSSVEVPTVSFHFPEGKVLPLPAKNYLIPVDSNGTFCF-AFAPTSSSL  220 (249)
Q Consensus       142 ~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~p~i~~~f~~g~~~~i~~~~y~~~~~~~~~~C~-~~~~~~~~~  220 (249)
                      +++|.+.+.+...    ..+.+.+ +|+.      ..+|+|+|+| +|.+++|+|++|+++.. ++ .|+ +|...+.+.
T Consensus       231 ~~~l~~~~~~~~~----~~~~~~~-~C~~------~~~p~i~f~f-~g~~~~i~~~~y~~~~~-~~-~C~~~i~~~~~~~  296 (325)
T d2apra_         231 AASVARAYGASDN----GDGTYTI-SCDT------SAFKPLVFSI-NGASFQVSPDSLVFEEF-QG-QCIAGFGYGNWGF  296 (325)
T ss_dssp             HHHHHHHHTCEEC----SSSCEEE-CSCG------GGCCCEEEEE-TTEEEEECGGGGEEEEE-TT-EEEESEEEESSSS
T ss_pred             HHHHHHHhCCccc----CCCceee-cccC------CCCCcEEEEE-CCEEEEEChHHeEEecC-CC-EEEEEEccCCCCC
Confidence            9999999854321    1223333 6754      4579999999 89999999999999876 34 565 487776778


Q ss_pred             eeeehhhccccEEEEeCCCCEEEEeeC
Q 037264          221 SIIGNVQQQGTRVSFNLRNSLIGFTPN  247 (249)
Q Consensus       221 ~ilG~~fl~~~y~vfD~~~~riGfa~~  247 (249)
                      +|||++|||++|+|||+|++||||||+
T Consensus       297 ~iLG~~flr~~y~vfD~~~~~IGfAp~  323 (325)
T d2apra_         297 AIIGDTFLKNNYVVFNQGVPEVQIAPV  323 (325)
T ss_dssp             EEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             EEECHHHhCcEEEEEECCCCEEeEEEc
Confidence            999999999999999999999999986
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure