Citrus Sinensis ID: 037309

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
Protein Sequence
YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEEDGGHPVAFPNSSTVVGESSELPMMQKLNSNVPAQSLNLLHRSQAMHAISSQMSTYNNGQNGFQMPAAMLHSHEVQATSSQMPMYYNGQNFLLLNGGHEDTLWQQNNSHHHVDSKTNNQPEGIDMINN
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHcccccccccEEEEEccccccccccHHHcccccccEEEEcccccccccccccccccccccccccccccccEEccccEEEEEEEccccccccccccccccEEEccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHccccccEEEEEcccccccccccccccHcccccEEEcccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccc
Coil and Loop (DISEMBL)
YRFVPTCKELVTYYLRNkilerplppskireaniykhsptelsekydkegsgvmyfftprdrkypegerpkrsvdgngfwkasgkaeevENFDILIAKKRSLVYYqgsykkpkktDWLMQEFFmtgsssssarkgrphnmklddWVLCKVYknkkrdkeedgghpvafpnsstvvgesselpmmqklnsnvpaqslNLLHRSQAMHAISSQmstynngqngfqmPAAMLHShevqatssqmpmyyngqnflllngghedtlwqqnnshhhvdsktnnqpegidminn
Flexible Loop (DISEMBL)
YRFVPTCKELVTYylrnkilerplppskireaniykhsptelsekydkegsgVMYFftprdrkypegerpkrsvdgngfwkasgkaeevenFDILIAKKRSLVYYQGSykkpkktdWLMQEFFMTgsssssarkgrphnmklddwVLCKVYKNKkrdkeedgghpvafpnssTVVGESSELPMMQKLNSNVPAQSLNLLHRSQAMHAISSQMSTYNNGQNGFQMPAAMLHSHEVQATSSQMPMYYNGQNFLLLNGGHEDTLWQQNNSHHhvdsktnnqpegidmiNN
Low Complexity Region (SEG)
YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEEDGGHPVAFPNSSTVVGESSELPMMQKLNSNVPAQSLNLLHRSQAMHAISSQMSTYNNGQNGFQMPAAMLHSHEVQATSSQMPMYYNGQNFLLLNGGHEDTLWQQNNSHHHVDSKTNNQPEGIDMINN
Disordered region (IsUnstruct)
**FVPTCKELVTYYLRNKILER******************************VMYFFT*******************GFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFM*****************LDDWVLCKVYK******************************************************************************************MYYNGQNFLLLNGGHEDTLW*************************
Disordered Region (DISOPRED)
YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTG****************DDWVLCKVYK***************************************************************************************************************************************
Disordered Region (DISEMBL)
YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKY*********VDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMT***********PHNMKLDDWVLCKVYKNK********GHPVAFPNSSTVVGESSELPMMQKLNSNVPAQSLNLLHRSQAMHAISSQMSTYNNGQNGFQMPAAMLHSHEVQATSSQMPMYYNGQNFLLLNGGHEDTLWQQN*********TNNQPEGIDMINN
Disordered Region (DISPRO)
YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSS*********NMKLDDWVLCKVYKNKK************************************************************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEEDGGHPVAFPNSSTVVGESSELPMMQKLNSNVPAQSLNLLHRSQAMHAISSQMSTYNNGQNGFQMPAAMLHSHEVQATSSQMPMYYNGQNFLLLNGGHEDTLWQQNNSHHHVDSKTNNQPEGIDMINN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	287	2.2.26 [Sep-21-2011]
O49255	268	NAC transcription factor	yes	no	0.536	0.574	0.424	2e-30
D2SMN4	406	NAC transcription factor	N/A	no	0.557	0.394	0.384	2e-29
A0SPJ9	402	NAC transcription factor	N/A	no	0.554	0.395	0.401	3e-29
A0SPJ6	396	NAC transcription factor	N/A	no	0.550	0.398	0.404	9e-29
A0SPJ8	406	NAC transcription factor	N/A	no	0.557	0.394	0.378	2e-28
A0SPJ4	405	NAC transcription factor	N/A	no	0.554	0.392	0.382	4e-28
A2YMR0	425	NAC transcription factor	N/A	no	0.536	0.362	0.398	6e-28
Q8H4S4	425	NAC transcription factor	no	no	0.536	0.362	0.393	7e-28
Q52QH4	318	NAC domain-containing pro	no	no	0.540	0.487	0.425	8e-28
Q8GY42	323	NAC transcription factor	no	no	0.522	0.464	0.427	1e-27

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 101/158 (63%), Gaps = 4/158 (2%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+ YYLRN+ + +P P S I E +IYK  P +L EK +  G    YFF+PR
Sbjct: 13  FRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEF-GENEWYFFSPR 71

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           +RKYP G RP R+   +G+WKA+G  + + +    +  K++LV+Y+G   K  KTDW+M 
Sbjct: 72  ERKYPNGVRPNRAA-VSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMH 130

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDK 158
           E+ +  S  +S +  R  +M+LD+WVLC++YK +   K
Sbjct: 131 EYRLHDSRKASTK--RNGSMRLDEWVLCRIYKKRGASK 166

May function in the transition between active cell division and cell expansion.
Arabidopsis thaliana (taxid: 3702)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 101/177 (57%), Gaps = 17/177 (9%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K  + PLP + I E ++YK  P EL EK    G    YFF+PR
Sbjct: 39  FRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKA-TFGEHEWYFFSPR 97

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAK-----KRSLVYYQGSYKKPKKT 115
           DRKYP G RP R+   +G+WKA+G  + +        +     K++LV+Y+G   +  KT
Sbjct: 98  DRKYPNGARPNRAAT-SGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGLKT 156

Query: 116 DWLMQEFFMTGSSSSSARKGR----------PHNMKLDDWVLCKVYKNKKRDKEEDG 162
           +W+M E+ +TG+S+ S    R          P +++LDDWVLC++YK   +     G
Sbjct: 157 NWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAVG 213

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 13/172 (7%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K  + PLP + I E ++YK  P EL EK    G    YFF+PR
Sbjct: 32  FRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKA-TFGEQEWYFFSPR 90

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDI---LIAKKRSLVYYQGSYKKPKKTDW 117
           DRKYP G RP R+   +G+WKA+G  + +         +  K +LV+Y+G   K  KT+W
Sbjct: 91  DRKYPNGARPNRAAT-SGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPKGLKTNW 149

Query: 118 LMQEFFMTGSSSSSARK--------GRPHNMKLDDWVLCKVYKNKKRDKEED 161
           +M E+ +T +SSS+A           R  +++LDDWVLC++YK   +    D
Sbjct: 150 IMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKKINKAAAAD 201

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  127 bits (319), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 15/173 (8%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K  + PLP + I E ++YK  P EL EK    G    YFF+PR
Sbjct: 32  FRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKA-TFGEQEWYFFSPR 90

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDI---LIAKKRSLVYYQGSYKKPKKTDW 117
           DRKYP G RP R+   +G+WKA+G  + +         +  K++LV+Y+G   K  KT+W
Sbjct: 91  DRKYPNGARPNRAAT-SGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKGLKTNW 149

Query: 118 LMQEFFMTGSSSSSARKGRP---------HNMKLDDWVLCKVYKNKKRDKEED 161
           +M E+ +T  +SSSA   RP          +++LDDWVLC++YK   +    D
Sbjct: 150 IMHEYRLT-DASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKINKAAAGD 201

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  126 bits (317), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 17/177 (9%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K  + PLP + I E ++YK  P EL EK    G    YFF+PR
Sbjct: 39  FRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKA-TFGEHEWYFFSPR 97

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAK-----KRSLVYYQGSYKKPKKT 115
           DRKY  G RP R+   +G+WKA+G  + +        +     K++LV+Y+G   +  KT
Sbjct: 98  DRKYANGARPNRAAT-SGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGLKT 156

Query: 116 DWLMQEFFMTGSSSSSARKGR----------PHNMKLDDWVLCKVYKNKKRDKEEDG 162
           +W+M E+ +TG+S+ S    R          P +++LDDWVLC++YK   +     G
Sbjct: 157 NWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAVG 213

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 102/178 (57%), Gaps = 19/178 (10%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K  + PLP + I E ++YK  P EL EK    G    YFF+PR
Sbjct: 38  FRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKA-TIGEQEWYFFSPR 96

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEV----ENFDIL---IAKKRSLVYYQGSYKKPK 113
           DRKYP G RP R+   +G+WKA+G  + +        ++   +  K++LV+Y+G   K  
Sbjct: 97  DRKYPNGARPNRAAT-SGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGKPPKGL 155

Query: 114 KTDWLMQEFFMTGSSSSSARKGRP----------HNMKLDDWVLCKVYKNKKRDKEED 161
           KT+W+M E+ +T +S S+    RP           +++LDDWVLC++YK   +    D
Sbjct: 156 KTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCRIYKKINKAAAGD 213

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  124 bits (312), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 19/173 (10%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K    PLP + I E ++YK  P EL EK +  G    YFF+PR
Sbjct: 33  FRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANF-GEQEWYFFSPR 91

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDIL---IAKKRSLVYYQGSYKKPKKTDW 117
           DRKYP G RP R+   +G+WKA+G  + +         +  K++LV+Y+G   K  KT+W
Sbjct: 92  DRKYPNGARPNRAAT-SGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKTNW 150

Query: 118 LMQEFFMTGSSSSSA-----RKGRPH---------NMKLDDWVLCKVYKNKKR 156
           +M E+ +T +SSS+A     R+  P          +++LDDWVLC++YK   +
Sbjct: 151 IMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNK 203

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  124 bits (311), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 19/173 (10%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K    PLP + I E ++YK  P +L EK +  G    YFF+PR
Sbjct: 33  FRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANF-GEQEWYFFSPR 91

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDIL---IAKKRSLVYYQGSYKKPKKTDW 117
           DRKYP G RP R+   +G+WKA+G  + + +       +  K++LV+Y+G   K  KT+W
Sbjct: 92  DRKYPNGARPNRAAT-SGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKTNW 150

Query: 118 LMQEFFMTGSSSSSA-----RKGRPH---------NMKLDDWVLCKVYKNKKR 156
           +M E+ +T +SSS+A     R+  P          +++LDDWVLC++YK   +
Sbjct: 151 IMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNK 203

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  124 bits (311), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 99/162 (61%), Gaps = 7/162 (4%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL  K+  +PLP   I E ++YK  P +L EK    G    YFFTPR
Sbjct: 25  FRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKA-LFGRKEWYFFTPR 83

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEV--ENFDILIAKKRSLVYYQGSYKKPKKTDWL 118
           DRKYP G RP R+  G G+WKA+G  + V  +     +  K++LV+Y G   +  KTDW+
Sbjct: 84  DRKYPNGSRPNRAA-GRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWI 142

Query: 119 MQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEE 160
           M E+ +  + +  A  G+  + KLD+WVLC++Y NKK + E+
Sbjct: 143 MHEYRL--ADADRAPGGKKGSQKLDEWVLCRLY-NKKNNWEK 181

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 97/159 (61%), Gaps = 9/159 (5%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +ELV +YL+ K    PLP S I E ++YK  P EL  K    G    YFF+PR
Sbjct: 20  FRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKA-SFGEHEWYFFSPR 78

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDI-LIAKKRSLVYYQGSYKKPKKTDWLM 119
           DRKYP G RP R+   +G+WKA+G  + +   +   +  K++LV+Y G   K  KTDW+M
Sbjct: 79  DRKYPNGVRPNRAAT-SGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDWIM 137

Query: 120 QEFFMTGSSSSSARK------GRPHNMKLDDWVLCKVYK 152
            E+ +T  + S+A K       R ++++LDDWVLC++YK
Sbjct: 138 HEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK 176

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
225435399	406	PREDICTED: uncharacterized protein LOC10	0.536	0.379	0.455	1e-34
118490007	282	NAC domain protein NAC2 [Solanum tuberos	0.850	0.865	0.361	2e-32
297746301	364	unnamed protein product [Vitis vinifera]	0.536	0.423	0.429	3e-32
147789356	330	hypothetical protein VITISV_034302 [Viti	0.536	0.466	0.423	1e-31
255544902	522	conserved hypothetical protein [Ricinus	0.540	0.296	0.427	2e-31
117586720	339	NAC domain protein [Cymbidium hybrid cul	0.581	0.492	0.411	2e-31
351728011	279	NAC domain protein [Glycine max] gi|1879	0.853	0.878	0.350	6e-31
224106187	386	NAC domain protein, IPR003441 [Populus t	0.519	0.386	0.421	3e-30
224143770	432	NAC domain protein, IPR003441 [Populus t	0.515	0.342	0.423	4e-30
449434768	290	PREDICTED: NAC transcription factor 29-l	0.536	0.531	0.430	6e-30

>gi|225435399|ref|XP_002282639.1| PREDICTED: uncharacterized protein LOC100250078 [Vitis vinifera]

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 105/156 (67%), Gaps = 2/156 (1%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           YRF PT  E + YYLR K+  +PLPP+KI E N+Y + P EL+ +Y+  G+   ++FTPR
Sbjct: 43  YRFNPTDAETIVYYLRKKVDHQPLPPNKIIEVNLYAYDPEELAARYEPCGNDEWFYFTPR 102

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G+RP RS+  NG WKA+G  +E++  D  +  ++SLV+Y+G  +   KT+W+M 
Sbjct: 103 DRKYPNGQRPNRSIT-NGHWKATGADKEIKFEDCKVGYRKSLVFYRGGPRDGVKTNWMMH 161

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKR 156
           EF +       +R G  ++M+LDD VLCK+YK ++R
Sbjct: 162 EFRVAEPPKPPSRSGV-NDMRLDDCVLCKIYKKEER 196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118490007|gb|ABK96797.1| NAC domain protein NAC2 [Solanum tuberosum]

 Score =  145 bits (366), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 152/274 (55%), Gaps = 30/274 (10%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+ YYLR +   RP P S I E +IYK  P EL EK +  G    YFFTPR
Sbjct: 13  FRFHPTDEELIMYYLRYQATSRPCPVSIIPEIDIYKFDPWELPEKAEF-GENEWYFFTPR 71

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R+   +G+WKA+G  + + + +  +  K++LV+Y+G   K  KTDW+M 
Sbjct: 72  DRKYPNGVRPNRAA-VSGYWKATGTDKAIYSANKYVGIKKALVFYKGKPPKGVKTDWIMH 130

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNK---------KRDKEEDGGHPVAFPNS 171
           E+ ++ S S +  K +  +M+LDDWVLC++YK K         K + EE     V+  N+
Sbjct: 131 EYRLSDSKSQTYSK-QSGSMRLDDWVLCRIYKKKNLGKTIEMMKVEVEELEAQNVSINNA 189

Query: 172 STVVG--ESSELPMMQKLN--------SNVP-AQSLNLLHRSQAMHAISSQMSTYNNGQN 220
             VVG  ++ +LP +  L+         ++P   S NLL+  Q     S  M+  +N  N
Sbjct: 190 IEVVGGPQTMKLPRICSLSHLLELDYYGSIPQLLSDNLLYDDQ-----SYTMNNMSNTSN 244

Query: 221 GFQMPAAMLHSHEVQATSSQMPMYYNGQNFLLLN 254
             Q+ +   +++ +  TS+   +++N Q  L +N
Sbjct: 245 VDQVSSQQQNTNNI--TSNNCNIFFNYQQPLFVN 276

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746301|emb|CBI16357.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/156 (42%), Positives = 104/156 (66%), Gaps = 2/156 (1%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           YRF PT  E++ +YLR KI  + LPP+KI E N+Y + P EL+ +Y+  G+   ++FTPR
Sbjct: 42  YRFNPTDAEIIVFYLRKKIDHQSLPPNKIIEVNLYGYDPDELAARYEPSGNDEWFYFTPR 101

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           +RKY  G+RP RS+ G G+WKA+G  +E++  D  +  +++LV+Y+GS +   KT+W+M 
Sbjct: 102 ERKYRNGQRPNRSI-GEGYWKATGADKEIKFEDRTVGYRKALVFYRGSAQNGVKTNWIMH 160

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKR 156
           EF +        R G  ++M+LDD VLC+VY+  +R
Sbjct: 161 EFTVAKPPGPPRRSGV-NDMRLDDCVLCRVYRTDER 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789356|emb|CAN73322.1| hypothetical protein VITISV_034302 [Vitis vinifera]

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 104/156 (66%), Gaps = 2/156 (1%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           YRF PT  E++ +YLR KI  + LPP+KI E N+Y + P EL+ +Y+  G+   ++FTPR
Sbjct: 41  YRFYPTDAEIIVFYLRKKIDHQSLPPNKIIEVNLYAYDPDELAARYEPSGNDEWFYFTPR 100

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           +RKY  G+RP RS+ G G+WKA+G  +E++  D  +  +++LV+Y+GS +   KT+W+M 
Sbjct: 101 ERKYRNGQRPNRSI-GEGYWKATGAEKEIKFEDRTVGYRKALVFYRGSPQNGVKTNWIMH 159

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKR 156
           EF +   +    R G  ++M+LDD VLC+V +  +R
Sbjct: 160 EFTVAKPTGPPRRSGA-NDMRLDDCVLCRVCRTDER 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544902|ref|XP_002513512.1| conserved hypothetical protein [Ricinus communis] gi|223547420|gb|EEF48915.1| conserved hypothetical protein [Ricinus communis]

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 101/159 (63%), Gaps = 4/159 (2%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           YRF P+ +EL+ +YLR K+ ++ LPP+KI   ++Y  +P  L+EKY   G    YFFTPR
Sbjct: 111 YRFCPSDEELIIHYLRRKVHDQILPPNKIISLDLYNFNPEFLAEKYANYGENEWYFFTPR 170

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
            +KY  G RP+RS DG G+WKA+G  +E++  DI++  +++LV+Y G      KT+W+M 
Sbjct: 171 AKKYKNGNRPRRSADG-GYWKATGADKEIKCRDIVVGFRKALVFYTGKPPSGVKTNWIMH 229

Query: 121 EFFMTGSSSSSARK---GRPHNMKLDDWVLCKVYKNKKR 156
           E+ +        RK   G   NM LDDWVLC++YK  ++
Sbjct: 230 EYRVDKPPPLRKRKRDDGTDDNMTLDDWVLCRIYKKSEK 268

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117586720|dbj|BAF36563.1| NAC domain protein [Cymbidium hybrid cultivar]

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 13/180 (7%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+ +YLRN+    P P S I E +IYK  P +L EK    G    YFFTPR
Sbjct: 12  FRFHPTDEELILHYLRNRAASSPCPASIIAEVDIYKFDPWDLPEKA-AFGDREWYFFTPR 70

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R+  G+G+WKA+G  + + +    I  K++LV+Y+G   K  KT+W+M 
Sbjct: 71  DRKYPNGNRPNRAA-GSGYWKATGTDKPISSGSENIGVKKALVFYKGRPPKGLKTNWIMH 129

Query: 121 EFFMTGSSSSSARKG---RPHNMKLDDWVLCKVYKNK--------KRDKEEDGGHPVAFP 169
           EF +  ++ S++ K    R H+M+LDDWVLC++Y+           +++E+  G    FP
Sbjct: 130 EFRLADANKSNSYKPIRLRDHSMRLDDWVLCRIYRKSNHLSPTEMDQEQEDPCGEETCFP 189

Source: Cymbidium hybrid cultivar

Species: Cymbidium hybrid cultivar

Genus: Cymbidium

Family: Orchidaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351728011|ref|NP_001238204.1| NAC domain protein [Glycine max] gi|187940301|gb|ACD39381.1| NAC domain protein [Glycine max]

 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 140/268 (52%), Gaps = 23/268 (8%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+ YYL N+   RP P S I E +IYK  P EL EK D  G    YFF+PR
Sbjct: 13  FRFHPTDEELIVYYLCNQATSRPCPASIIPEVDIYKFDPWELPEKTD-FGEKEWYFFSPR 71

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           +RKYP G RP R+   +G+WKA+G  + + +    +  K++LV+Y+G   K  KTDW+M 
Sbjct: 72  ERKYPNGVRPNRAT-VSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPPKGLKTDWIMH 130

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDK--EEDGGHPVAFPNSSTVVGES 178
           E+ + GS   + R+    +M+LDDWVLC++YK K   K  E    +P+A  N  T     
Sbjct: 131 EYRLIGSRRQANRQV--GSMRLDDWVLCRIYKKKNIGKSMEAKEEYPIALIN-LTPANND 187

Query: 179 SELPMMQKLNSNVPAQSLNLLHRSQAMHAISS---------QMSTYNNGQNGFQMP---- 225
           SE  M++   ++     L + +     H +S          Q++T N G + F  P    
Sbjct: 188 SEQEMVKFPRTSSLTHLLEMDYLGPISHILSDATYNSTFDFQINTANGGIDPFVKPQPVE 247

Query: 226 ---AAMLHSHEVQATSSQMPMYYNGQNF 250
              AA    ++V+  S+  P  +  Q +
Sbjct: 248 IPYAADSGKYQVKQNSTINPTIFVNQVY 275

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106187|ref|XP_002314077.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850485|gb|EEE88032.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 101/152 (66%), Gaps = 3/152 (1%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           YRF P   ELV +YL+NK+   PLP ++I + ++Y+H+P EL+E++   G    YFFTPR
Sbjct: 87  YRFCPHNHELVLHYLKNKVSGLPLPRNRIADVSLYQHNPEELAEQFKHYGEREWYFFTPR 146

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           D+KY  G RP R+  G G+WKA+G  +++ +   ++  ++SLVYY G   K  KT+W+M 
Sbjct: 147 DKKYRNGTRPNRAA-GGGYWKATGADKKIVHDKAIVGYRKSLVYYNGKAPKGDKTNWMMH 205

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYK 152
           EF M   +++   +   ++M+LD+WVLC++YK
Sbjct: 206 EFRM--EAAAPPIRNNINDMRLDEWVLCRIYK 235

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143770|ref|XP_002325069.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222866503|gb|EEF03634.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 3/151 (1%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           YRF P  +EL++ YL  KI  RPLP + I E  +YK++P  L+E Y+  G    YF TPR
Sbjct: 43  YRFKPKDQELISCYLLCKIRNRPLPRNGIHEVTLYKYNPETLAENYEPYGEKEWYFLTPR 102

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G+RP R+  G+G+WKA+G   +V + + +I  K++LV+Y+G      KT+W+M 
Sbjct: 103 DRKYPNGDRPNRAA-GDGYWKATGADTDVISANQVIGSKKTLVFYRGKAPGGGKTNWIMH 161

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVY 151
           E+    S  +  R      M+LD+WVLC+++
Sbjct: 162 EYRARNSDGAPKRTN--DGMRLDEWVLCRIH 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434768|ref|XP_004135168.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus] gi|449530426|ref|XP_004172196.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus]

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 4/158 (2%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+ +YLRN+   +P P S I E +IYK  P +L EK D  G    YFF+PR
Sbjct: 13  FRFHPTDEELIMFYLRNQATSKPCPVSIIPEVDIYKFDPWDLPEKAD-SGENEWYFFSPR 71

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R+   +G+WKA+G  + + +    +  K++LV+Y+G   K  KTDW+M 
Sbjct: 72  DRKYPNGVRPNRAA-VSGYWKATGTDKAIYSASKYVGVKKALVFYKGKPPKGVKTDWIMH 130

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDK 158
           E+ +  S+  S ++    +M+LDDWVLC++YK +  +K
Sbjct: 131 EYRLIESNKQSMKQS--GSMRLDDWVLCRIYKKRHSNK 166

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.679	0.727	0.375	4.7e-32
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.564	0.445	0.393	7.7e-31
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.463	0.370	0.409	4.7e-29
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.543	0.482	0.412	1.5e-28
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.609	0.618	0.395	5e-28
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.554	0.550	0.412	1.7e-27
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.557	0.632	0.391	3.5e-27
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.540	0.496	0.412	7.3e-27
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.522	0.468	0.405	5.2e-26
TAIR|locus:2019833	371	SMB "SOMBRERO" [Arabidopsis th	0.533	0.412	0.350	6.4e-26

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 78/208 (37%), Positives = 122/208 (58%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +EL+ YYLRN+ + +P P S I E +IYK  P +L EK +  G    YFF+PR
Sbjct:    13 FRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEF-GENEWYFFSPR 71

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
             +RKYP G RP R+   +G+WKA+G  + + +    +  K++LV+Y+G   K  KTDW+M 
Sbjct:    72 ERKYPNGVRPNRAAV-SGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMH 130

Query:   121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDK---EEDGGHPVAFPNSST--VV 175
             E+ +  S  +S +  R  +M+LD+WVLC++YK +   K   E++G          T  VV
Sbjct:   131 EYRLHDSRKASTK--RNGSMRLDEWVLCRIYKKRGASKLLNEQEGFMDEVLMEDETKVVV 188

Query:   176 GES---SELPMMQKLNSNVPAQSLNLLH 200
              E+   +E  +M   +  +P ++ +L H
Sbjct:   189 NEAERRTEEEIMMMTSMKLP-RTCSLAH 215

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
 Identities = 68/173 (39%), Positives = 100/173 (57%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV +YL+ K    PLP + I E ++YK  P EL  K    G    YFF+PR
Sbjct:    21 FRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASF-GEQEWYFFSPR 79

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFD--ILIAKKRSLVYYQGSYKKPKKTDWL 118
             DRKYP G RP R+   +G+WKA+G  + V   D    +  K++LV+Y G   K  K+DW+
Sbjct:    80 DRKYPNGARPNRAAT-SGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWI 138

Query:   119 MQEFFMTGSSSSSARKG-----RPHNMKLDDWVLCKVYK--NKKRDKEEDGGH 164
             M E+ +  +  ++   G     + ++++LDDWVLC++YK  N  R  + D  H
Sbjct:   139 MHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDNDKDH 191

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 59/144 (40%), Positives = 85/144 (59%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +EL+ +YLR K+   P+P S I + +IYK  P +L  K    G    YFF+PR
Sbjct:    14 FRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPF-GEKEWYFFSPR 72

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEV-----ENFDILIAKKRSLVYYQGSYKKPKKT 115
             DRKYP G RP R+   +G+WKA+G  + +     E F   I  K++LV+Y+G   K  KT
Sbjct:    73 DRKYPNGARPNRAA-ASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPPKGVKT 131

Query:   116 DWLMQEFFMTGSSS----SSARKG 135
             +W+M E+ +  S S    +S+R G
Sbjct:   132 NWIMHEYRLADSLSPKRINSSRSG 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 68/165 (41%), Positives = 98/165 (59%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV +YL+ K    PLP S I E ++YK  P EL  K    G    YFF+PR
Sbjct:    20 FRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASF-GEHEWYFFSPR 78

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDI-LIAKKRSLVYYQGSYKKPKKTDWLM 119
             DRKYP G RP R+   +G+WKA+G  + +   +   +  K++LV+Y G   K  KTDW+M
Sbjct:    79 DRKYPNGVRPNRAAT-SGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDWIM 137

Query:   120 QEFFMTGSSSSSARKG------RPHNMKLDDWVLCKVYKNKKRDK 158
              E+ +T  + S+A K       R ++++LDDWVLC++YK     +
Sbjct:   138 HEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQR 182

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 72/182 (39%), Positives = 101/182 (55%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV +YL  K     +    I E ++YK +P EL E     G    YFF+PR
Sbjct:    11 FRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEM-SLYGEKEWYFFSPR 69

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
             DRKYP G RP R+  G G+WKA+G  + +     L  KK +LV+Y G   K  KT+W+M 
Sbjct:    70 DRKYPNGSRPNRAA-GTGYWKATGADKPIGKPKTLGIKK-ALVFYAGKAPKGIKTNWIMH 127

Query:   121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEEDGGHPVAFPNSSTVVGESSE 180
             E+ +  +   SA   + +N++LDDWVLC++Y NKK   E+    P      +T + E S 
Sbjct:   128 EYRLA-NVDRSASVNKKNNLRLDDWVLCRIY-NKKGTMEKY--FPADEKPRTTTMAEQSS 183

Query:   181 LP 182
              P
Sbjct:   184 SP 185

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 68/165 (41%), Positives = 98/165 (59%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV +YL  K   + +    I E ++YK+ P EL       G    YFF+PR
Sbjct:    11 FRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPG-LALYGEKEWYFFSPR 69

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
             DRKYP G RP RS  G+G+WKA+G A++       +  K++LV+Y G   K +KT+W+M 
Sbjct:    70 DRKYPNGSRPNRSA-GSGYWKATG-ADKPIGLPKPVGIKKALVFYAGKAPKGEKTNWIMH 127

Query:   121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEEDGGHP 165
             E+ +      S RK + ++++LDDWVLC++Y NKK   E  G  P
Sbjct:   128 EYRLA-DVDRSVRK-KKNSLRLDDWVLCRIY-NKKGATERRGPPP 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 67/171 (39%), Positives = 100/171 (58%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV  YL  K   +P+P   I E ++Y++ P +L +     G    YFF+PR
Sbjct:    14 FRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMA-LYGEKEWYFFSPR 72

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
             DRKYP G RP R+  G G+WKA+G A++       +  K++LV+Y G     +KT+W+M 
Sbjct:    73 DRKYPNGSRPNRAA-GTGYWKATG-ADKPIGRPKPVGIKKALVFYSGKPPNGEKTNWIMH 130

Query:   121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNK----KRDKE-EDGGHPV 166
             E+ +     S  +K   ++++LDDWVLC++Y  K    KR  + EDG  PV
Sbjct:   131 EYRLADVDRSVRKK---NSLRLDDWVLCRIYNKKGVIEKRRSDIEDGLKPV 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 66/160 (41%), Positives = 94/160 (58%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV +YL  +    P+    I E ++YK +P EL E     G    YFF+ R
Sbjct:    54 FRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMA-LYGEKEWYFFSHR 112

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
             DRKYP G RP R+  G G+WKA+G  + +     L  KK +LV+Y G   K  KT+W+M 
Sbjct:   113 DRKYPNGSRPNRAA-GTGYWKATGADKPIGKPKTLGIKK-ALVFYAGKAPKGIKTNWIMH 170

Query:   121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEE 160
             E+ +  +   SA   + +N++LDDWVLC++Y NKK   E+
Sbjct:   171 EYRLA-NVDRSASTNKKNNLRLDDWVLCRIY-NKKGTMEK 208

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 64/158 (40%), Positives = 93/158 (58%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
             +RF PT +ELV +YL+ K    PLP + I + ++YK  P EL  K    G    YFF+PR
Sbjct:    21 FRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASF-GEQEWYFFSPR 79

Query:    61 DRKYPEGERPKRSVDGNGFWKASGKAEEVENF----DILIAKKRSLVYYQGSYKKPKKTD 116
             DRKYP G RP R+   +G+WKA+G  + V +        +  K++LV+Y G   K  K+D
Sbjct:    80 DRKYPNGARPNRAAT-SGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSD 138

Query:   117 WLMQEFFMTGSSSSSARK-GRPHN-MKLDDWVLCKVYK 152
             W+M E+ +T +  +     G   N ++LDDWVLC++YK
Sbjct:   139 WIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2019833 SMB "SOMBRERO" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
 Identities = 61/174 (35%), Positives = 97/174 (55%)

Query:     1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVM---YFF 57
             +RF PT +EL+ YYL+ K+   P+    IRE ++ K  P EL EK  + GSG     YFF
Sbjct:    21 FRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKC-RIGSGPQNEWYFF 79

Query:    58 TPRDRKYPEGERPKRSVDGNGFWKASGKAEEVE-NFDILIAKKRSLVYYQGSYKKPKKTD 116
             + +D+KYP G R  R+    GFWKA+G+ + +  N    I  +++LV+Y G     +KT+
Sbjct:    80 SHKDKKYPTGTRTNRATAA-GFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHGQKTE 138

Query:   117 WLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKK------RDKEEDGGH 164
             W+M E+ +  S +          ++ D WV+C+V+K K       +++E+D  H
Sbjct:   139 WIMHEYRLDDSENE---------IQEDGWVVCRVFKKKNHFRGFHQEQEQDHHH 183

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010455 "positive regulation of cell fate commitment" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0003002 "regionalization" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032772001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (373 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	287
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	6e-42

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  140 bits (355), Expect = 6e-42
 Identities = 57/124 (45%), Positives = 81/124 (65%), Gaps = 3/124 (2%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLP-PSKIREANIYKHSPTELSEKYDKEGSGVMYFFTP 59
           +RF PT +ELV YYL+ K+L +PLP    I E +IYK  P +L +   K G    YFF+P
Sbjct: 5   FRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWYFFSP 64

Query: 60  RDRKYPEGERPKRSVDGNGFWKASGKAEEVENFD-ILIAKKRSLVYYQGSYKKPKKTDWL 118
           RDRKYP G R  R+  G+G+WKA+GK + V +    ++  K++LV+Y+G   K +KTDW+
Sbjct: 65  RDRKYPNGSRTNRAT-GSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKTDWV 123

Query: 119 MQEF 122
           M E+
Sbjct: 124 MHEY 127

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	287
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.2e-41  Score=282.44  Aligned_cols=123  Identities=44%  Similarity=0.874  Sum_probs=95.8

Q ss_pred             CcccCChHHHHHHHHHHhHhCCCCCC-CceeeccCCCCCCcccccccccCCCceEEEEeecCCCCCCCCCCccccCCCCe
Q 037309            1 YRFVPTCKELVTYYLRNKILERPLPP-SKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGF   79 (287)
Q Consensus         1 FRF~PTDEELV~~YL~~Ki~g~pl~~-~~I~evDVY~~ePwdLp~~~~~~ge~ewYFFs~r~~k~~~G~R~nRaVt~~G~   79 (287)
                      |||+|||||||.+||++|+.|.+++. .+|+++|||++|||+|+... ..++++||||+++++++++|.|++|+ +++|+
T Consensus         5 ~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~-~~~~~~~yFF~~~~~~~~~~~r~~R~-~~~G~   82 (129)
T PF02365_consen    5 FRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKF-KGGDEEWYFFSPRKKKYPNGGRPNRV-TGGGY   82 (129)
T ss_dssp             EEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHS-SS-SSEEEEEEE----------S-EE-ETTEE
T ss_pred             eEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhc-cCCCceEEEEEecccccCCccccccc-ccceE
Confidence            79999999999999999999999886 89999999999999999544 45678999999999999999999998 99999


Q ss_pred             EEecccCeeEee-CCeEEEEEEEEEEeeCcCCCCCCcCeEEEEEeeC
Q 037309           80 WKASGKAEEVEN-FDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMT  125 (287)
Q Consensus        80 WK~tG~~k~I~~-~g~~VG~KKtLvFy~gr~p~g~kT~WvMhEYrL~  125 (287)
                      ||++|++++|.. +|++||+||+|+||.++.+++.+|+|+||||+|.
T Consensus        83 Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   83 WKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             EeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999995 9999999999999999889999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	287
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-26
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-23
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		6e-23

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT  ELV +YL  K   + LP   I E ++YK  P +L E+    G+   YFFTPR
Sbjct: 19  FRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPER-ALFGAREWYFFTPR 77
Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R+  GNG+WKA+G  + V      +  K++LV+Y G   +  KTDW+M 
Sbjct: 78  DRKYPNGSRPNRAA-GNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMH 136
Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEE 160
           E+ +  +  ++A   +  +++LDDWVLC++Y NKK + E+
Sbjct: 137 EYRLADAGRAAAGAKK-GSLRLDDWVLCRLY-NKKNEWEK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+  YL  K          I E ++YK  P  L  K    G    YFF+PR
Sbjct: 21  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNK-ALFGEKEWYFFSPR 79
Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R V G+G+WKA+G  + +      +  K++LV+Y G   K  KT+W+M 
Sbjct: 80  DRKYPNGSRPNR-VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMH 138
Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNK 154
           E+ +      S R G   + KLDDWVLC++YK +
Sbjct: 139 EYRLI---EPSRRNG---STKLDDWVLCRIYKKQ 166

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+  YL  K          I E ++YK  P  L  K    G    YFF+PR
Sbjct: 24  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNK-ALFGEKEWYFFSPR 82
Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R V G+G+WKA+G  + +      +  K++LV+Y G   K  KT+W+M 
Sbjct: 83  DRKYPNGSRPNR-VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMH 141
Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNK 154
           E+ +      S R G   + KLDDWVLC++YK +
Sbjct: 142 EYRLI---EPSRRNG---STKLDDWVLCRIYKKQ 169
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	287
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	8e-53
1ut7_A	171	No apical meristem protein; transcription regulati	2e-51

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  169 bits (430), Expect = 8e-53
 Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 5/160 (3%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT  ELV +YL  K   + LP   I E ++YK  P +L E+    G+   YFFTPR
Sbjct: 19  FRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERA-LFGAREWYFFTPR 77

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R+  GNG+WKA+G  + V      +  K++LV+Y G   +  KTDW+M 
Sbjct: 78  DRKYPNGSRPNRAA-GNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMH 136

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKEE 160
           E+ +  +  ++A   +  +++LDDWVLC++Y   K+++ E
Sbjct: 137 EYRLADAGRAAAGA-KKGSLRLDDWVLCRLY--NKKNEWE 173

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  165 bits (420), Expect = 2e-51
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 8/159 (5%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+  YL  K          I E ++YK  P  L  K    G    YFF+PR
Sbjct: 21  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA-LFGEKEWYFFSPR 79

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R V G+G+WKA+G  + +      +  K++LV+Y G   K  KT+W+M 
Sbjct: 80  DRKYPNGSRPNR-VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMH 138

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKRDKE 159
           E+ +   S  +       + KLDDWVLC++YK +   ++
Sbjct: 139 EYRLIEPSRRN------GSTKLDDWVLCRIYKKQSSAQK 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	287
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=9.8e-56  Score=385.65  Aligned_cols=152  Identities=42%  Similarity=0.809  Sum_probs=130.5

Q ss_pred             CcccCChHHHHHHHHHHhHhCCCCCCCceeeccCCCCCCcccccccccCCCceEEEEeecCCCCCCCCCCccccCCCCeE
Q 037309            1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFW   80 (287)
Q Consensus         1 FRF~PTDEELV~~YL~~Ki~g~pl~~~~I~evDVY~~ePwdLp~~~~~~ge~ewYFFs~r~~k~~~G~R~nRaVt~~G~W   80 (287)
                      |||+|||||||.+||++|+.|.+++.++|.++|||++|||+||+.+ ..++++|||||++++||++|.|++|+ |++|||
T Consensus        19 fRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~-~~g~~ewYFFs~r~~ky~~g~R~nR~-t~~G~W   96 (174)
T 3ulx_A           19 FRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERA-LFGAREWYFFTPRDRKYPNGSRPNRA-AGNGYW   96 (174)
T ss_dssp             CCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGC-SSCSSEEEEEEECCC-----CCSCEE-ETTEEE
T ss_pred             ceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhh-ccCCceEEEEeccccccCCCCCceee-cCCceE
Confidence            8999999999999999999999999999999999999999999998 67889999999999999999999999 999999


Q ss_pred             EecccCeeEeeCCeEEEEEEEEEEeeCcCCCCCCcCeEEEEEeeCCCCCccccCCCCCCCCCCCEEEEEEEEeCC
Q 037309           81 KASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKK  155 (287)
Q Consensus        81 K~tG~~k~I~~~g~~VG~KKtLvFy~gr~p~g~kT~WvMhEYrL~~~~~~~~~~~~~~~~~~~e~VLCRIy~K~~  155 (287)
                      |+||++++|..+|.+||+||+|+||.|++|++.||+|+||||+|........... ...+..++|||||||+|++
T Consensus        97 katG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~-~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A           97 KATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAK-KGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             EECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC------------CCSSEEEEEEEESCC
T ss_pred             ccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccc-cCCCCCCCEEEEEEEEcCC
Confidence            9999999999879999999999999999999999999999999998754321000 0123578999999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3.2e-55  Score=381.54  Aligned_cols=148  Identities=40%  Similarity=0.754  Sum_probs=127.0

Q ss_pred             CcccCChHHHHHHHHHHhHhCCCCCCCceeeccCCCCCCcccccccccCCCceEEEEeecCCCCCCCCCCccccCCCCeE
Q 037309            1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFW   80 (287)
Q Consensus         1 FRF~PTDEELV~~YL~~Ki~g~pl~~~~I~evDVY~~ePwdLp~~~~~~ge~ewYFFs~r~~k~~~G~R~nRaVt~~G~W   80 (287)
                      |||+|||||||.+||++|+.|.+++.++|+++|||++|||+||+.+ ..++++|||||++++||++|.|++|+ |++|||
T Consensus        21 fRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~-~~g~~ewyFFs~r~~k~~~g~R~~R~-t~~G~W   98 (171)
T 1ut7_A           21 FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA-LFGEKEWYFFSPRDRKYPNGSRPNRV-AGSGYW   98 (171)
T ss_dssp             EEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHS-SSCSSEEEEEEECCC-------CCEE-ETTEEE
T ss_pred             ceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchh-hcCCccEEEEeccccccCCCCccccc-CCCCEE
Confidence            8999999999999999999999999999999999999999999998 78899999999999999999999999 999999


Q ss_pred             EecccCeeEeeCCeEEEEEEEEEEeeCcCCCCCCcCeEEEEEeeCCCCCccccCCCCCCCCCCCEEEEEEEEeCCC
Q 037309           81 KASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNKKR  156 (287)
Q Consensus        81 K~tG~~k~I~~~g~~VG~KKtLvFy~gr~p~g~kT~WvMhEYrL~~~~~~~~~~~~~~~~~~~e~VLCRIy~K~~~  156 (287)
                      |+||++++|+.++.+||+||+|+||.|++|++.||+|+||||+|.......      .....++|||||||+|+..
T Consensus        99 k~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~------~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           99 KATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN------GSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------------CCEEEEEEEECC--
T ss_pred             eccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcccc------CcccCCCEEEEEEEEcCCC
Confidence            999999999988899999999999999999999999999999999875321      1235789999999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	287
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	5e-43

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  142 bits (360), Expect = 5e-43
 Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 8/154 (5%)

Query: 1   YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPR 60
           +RF PT +EL+  YL  K          I E ++YK  P  L       G    YFF+PR
Sbjct: 21  FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPN-KALFGEKEWYFFSPR 79

Query: 61  DRKYPEGERPKRSVDGNGFWKASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQ 120
           DRKYP G RP R   G+G+WKA+G  + +      +  K++LV+Y G   K  KT+W+M 
Sbjct: 80  DRKYPNGSRPNRVA-GSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMH 138

Query: 121 EFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNK 154
           E+ +   S       R  + KLDDWVLC++YK +
Sbjct: 139 EYRLIEPSR------RNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	287
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-51  Score=352.26  Aligned_cols=146  Identities=40%  Similarity=0.769  Sum_probs=125.5

Q ss_pred             CcccCChHHHHHHHHHHhHhCCCCCCCceeeccCCCCCCcccccccccCCCceEEEEeecCCCCCCCCCCccccCCCCeE
Q 037309            1 YRFVPTCKELVTYYLRNKILERPLPPSKIREANIYKHSPTELSEKYDKEGSGVMYFFTPRDRKYPEGERPKRSVDGNGFW   80 (287)
Q Consensus         1 FRF~PTDEELV~~YL~~Ki~g~pl~~~~I~evDVY~~ePwdLp~~~~~~ge~ewYFFs~r~~k~~~G~R~nRaVt~~G~W   80 (287)
                      |||+|||||||.+||++|+.|.+++.++|+++|||++|||+||+.. ..++++||||+++.+++++|.|.+|+ |++|+|
T Consensus        21 ~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~-~~~~~~wyFft~~~~k~~~g~r~~R~-~g~G~W   98 (166)
T d1ut7a_          21 FRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKA-LFGEKEWYFFSPRDRKYPNGSRPNRV-AGSGYW   98 (166)
T ss_dssp             EEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHS-SSCSSEEEEEEECCC-------CCEE-ETTEEE
T ss_pred             cccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchh-ccCcceEEEEeeeccccCCCCccccc-cCCCEe
Confidence            8999999999999999999999999999999999999999999987 67888999999999999999999999 999999


Q ss_pred             EecccCeeEeeCCeEEEEEEEEEEeeCcCCCCCCcCeEEEEEeeCCCCCccccCCCCCCCCCCCEEEEEEEEeC
Q 037309           81 KASGKAEEVENFDILIAKKRSLVYYQGSYKKPKKTDWLMQEFFMTGSSSSSARKGRPHNMKLDDWVLCKVYKNK  154 (287)
Q Consensus        81 K~tG~~k~I~~~g~~VG~KKtLvFy~gr~p~g~kT~WvMhEYrL~~~~~~~~~~~~~~~~~~~e~VLCRIy~K~  154 (287)
                      |++|+++.|..+|.+||+||+|+||+++++++.+|+|+||||+|.+......      ....++|||||||+|+
T Consensus        99 k~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~------~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          99 KATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNG------STKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------------CCEEEEEEEECC
T ss_pred             cccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccC------ccccCCEEEEEEEecC
Confidence            9999999999999999999999999999999999999999999988764321      2256799999999984