Citrus Sinensis ID: 037388
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 70 | ||||||
| 359806606 | 257 | uncharacterized protein LOC100796049 [Gl | 0.528 | 0.143 | 0.648 | 4e-06 | |
| 363806806 | 259 | uncharacterized protein LOC100778341 [Gl | 0.571 | 0.154 | 0.634 | 8e-06 | |
| 18424995 | 258 | uncharacterized protein [Arabidopsis tha | 0.657 | 0.178 | 0.521 | 1e-05 | |
| 297797611 | 258 | hypothetical protein ARALYDRAFT_332797 [ | 0.657 | 0.178 | 0.521 | 1e-05 | |
| 21593192 | 258 | unknown [Arabidopsis thaliana] | 0.657 | 0.178 | 0.521 | 1e-05 | |
| 9758568 | 219 | unnamed protein product [Arabidopsis tha | 0.657 | 0.210 | 0.521 | 1e-05 | |
| 356552298 | 258 | PREDICTED: uncharacterized protein At3g4 | 0.571 | 0.155 | 0.609 | 3e-05 | |
| 147801370 | 256 | hypothetical protein VITISV_037838 [Viti | 0.528 | 0.144 | 0.594 | 3e-05 | |
| 346466083 | 298 | hypothetical protein [Amblyomma maculatu | 0.528 | 0.124 | 0.594 | 4e-05 | |
| 297819624 | 261 | hypothetical protein ARALYDRAFT_485334 [ | 0.528 | 0.141 | 0.594 | 7e-05 |
| >gi|359806606|ref|NP_001241016.1| uncharacterized protein LOC100796049 [Glycine max] gi|255634636|gb|ACU17680.1| unknown [Glycine max] | Back alignment and taxonomy information |
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Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 8 FEVSPDTYPVVSRFLNEEETKAWGLEPYDTEVAENLC 44
V PDT VVS+ L EEET AWG+EPYDTE A+N C
Sbjct: 91 LHVGPDTCYVVSKLLKEEETDAWGIEPYDTEDADNNC 127
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363806806|ref|NP_001242285.1| uncharacterized protein LOC100778341 [Glycine max] gi|255639151|gb|ACU19875.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|18424995|ref|NP_569020.1| uncharacterized protein [Arabidopsis thaliana] gi|110737950|dbj|BAF00912.1| hypothetical protein [Arabidopsis thaliana] gi|194579019|gb|ACF75543.1| At5g65810 [Arabidopsis thaliana] gi|332010727|gb|AED98110.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297797611|ref|XP_002866690.1| hypothetical protein ARALYDRAFT_332797 [Arabidopsis lyrata subsp. lyrata] gi|297312525|gb|EFH42949.1| hypothetical protein ARALYDRAFT_332797 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|21593192|gb|AAM65141.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|9758568|dbj|BAB09049.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356552298|ref|XP_003544505.1| PREDICTED: uncharacterized protein At3g49720-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|147801370|emb|CAN74732.1| hypothetical protein VITISV_037838 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|346466083|gb|AEO32886.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
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| >gi|297819624|ref|XP_002877695.1| hypothetical protein ARALYDRAFT_485334 [Arabidopsis lyrata subsp. lyrata] gi|297323533|gb|EFH53954.1| hypothetical protein ARALYDRAFT_485334 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 70 | ||||||
| TAIR|locus:2156208 | 258 | CGR3 "AT5G65810" [Arabidopsis | 0.628 | 0.170 | 0.545 | 1.1e-07 | |
| TAIR|locus:2097380 | 261 | AT3G49720 "AT3G49720" [Arabido | 0.5 | 0.134 | 0.628 | 1.2e-06 |
| TAIR|locus:2156208 CGR3 "AT5G65810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 10 VSPDTYPVVSRFLNEEETKAWGLEPYDTEVAENLCIKALYAWLI 53
V P+T VVS LNEEET+AWG+EPYD E A++ C L+ L+
Sbjct: 94 VGPETCSVVSSLLNEEETEAWGVEPYDVEDADSNCKSLLHKGLV 137
|
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| TAIR|locus:2097380 AT3G49720 "AT3G49720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
No confident hit detected by STRING
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 70 | |||
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 90.7 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 84.42 |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
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Probab=90.70 E-value=0.096 Score=38.13 Aligned_cols=56 Identities=9% Similarity=0.106 Sum_probs=43.7
Q ss_pred eeeeeeCCCchhHhHhhhcccccccccccccchhhHHHHHHHHHHHHH-HHHhHhhcCccee
Q 037388 5 CTKFEVSPDTYPVVSRFLNEEETKAWGLEPYDTEVAENLCIKALYAWL-ISNFLFHTGQHFF 65 (70)
Q Consensus 5 ~kvLHVGPdTC~VVSkLLkEeeTeAWGVEPYd~edad~~CksLvrkgl-vr~~~~h~g~~~~ 65 (70)
.+||.+|-+.-...+.|.++-..++.|||-. +.+-.+.++||+ |--.|.-.|+..|
T Consensus 15 srVLDLGCGdG~LL~~L~~~k~v~g~GvEid-----~~~v~~cv~rGv~Viq~Dld~gL~~f 71 (193)
T PF07021_consen 15 SRVLDLGCGDGELLAYLKDEKQVDGYGVEID-----PDNVAACVARGVSVIQGDLDEGLADF 71 (193)
T ss_pred CEEEecCCCchHHHHHHHHhcCCeEEEEecC-----HHHHHHHHHcCCCEEECCHHHhHhhC
Confidence 5899999999999999999999999999843 344667788887 5555655666544
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00