Citrus Sinensis ID: 037410

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYSGIPI
Secondary Structure (PSIPRED)
cHHHHHHccHHHHcccccccHHHHHHHHHccHHHHHHHHHHcHHHcccccccccccccHHHHHHcccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHccccccccccccccccHHHHHHHccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccEEEEEEEEcccccc
Coil and Loop (DISEMBL)
MEEILELCPslllnvnakgdtplrvaakfghsDIVSVLVQTAKiaqhgdgepesgigadRQMIRMANNEKNTALHEAVCHGNVHVVKILTkqgpdnpysannygktplymaAKGRYSEMVIELLETahqcpmkapteRQLCMLQQCTFILLSLTRYSGIPI
Flexible Loop (DISEMBL)
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKiaqhgdgepesgigADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLsltrysgipi
Low Complexity Region (SEG)
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYSGIPI
Disordered region (IsUnstruct)
***ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIA**************************TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYS****
Disordered Region (DISOPRED)
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYSGI**
Disordered Region (DISEMBL)
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYSGIPI
Disordered Region (DISPRO)
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQ*******SGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYSGIPI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYSGIPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
Q9TXQ1	2276	Poly(ADP-ribose) polymera	yes	no	0.652	0.046	0.376	2e-07
Q92625	1134	Ankyrin repeat and SAM do	yes	no	0.689	0.097	0.330	1e-06
Q9HFE7	146	Ankyrin repeat-containing	yes	no	0.658	0.726	0.274	6e-06
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	no	0.552	0.045	0.342	2e-05
Q6AWW5	524	Ankyrin repeat-containing	no	no	0.708	0.217	0.283	2e-05
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	no	0.552	0.047	0.342	2e-05
Q5ZIJ9	954	E3 ubiquitin-protein liga	no	no	0.751	0.126	0.316	2e-05
Q6GQX6	883	Ankyrin repeat and SAM do	no	no	0.757	0.138	0.292	2e-05
Q69ZU8	712	Ankyrin repeat domain-con	no	no	0.664	0.150	0.316	2e-05
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	no	0.559	0.020	0.360	3e-05

>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 20  DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC 79
           +TPL VAA+ G +   + L++     + GD + ES I ADR +I       N+ALH AV 
Sbjct: 413 ETPLHVAARAGRAVNCTFLMKEMLDLEKGD-DGESTIRADRSIINARTRSGNSALHLAVL 471

Query: 80  HGNVHVVKILTKQGP---DNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             N+ VV  L  +     DNP S      TPL MA    Y EM  +L+E
Sbjct: 472 RNNLDVVDALLAEPTIVVDNPTSTGQNRLTPLMMACGKGYLEMAKKLVE 520

Poly[ADP-ribose] polymerases modify various nuclear proteins by poly(ADP-ribosyl)ation, a post-translational modification synthesized after DNA damage that appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks and programmed cell death.
Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 3EC: 0

>sp|Q92625|ANS1A_HUMAN Ankyrin repeat and SAM domain-containing protein 1A OS=Homo sapiens GN=ANKS1A PE=1 SV=4

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 22/133 (16%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEP-----ESGIGADRQMIRM---- 65
           V++ G TPL  AA  GH D+V VL++   +    D +       +    D Q++R+    
Sbjct: 76  VDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVRLLIHQ 135

Query: 66  ---------ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA-KGR 115
                     NN+  TALH A  +G+  VVK+L ++  D P   NN  +TPL +AA  GR
Sbjct: 136 GPSHTRVNEQNNDNETALHCAAQYGHTEVVKVLLEELTD-PTMRNNKFETPLDLAALYGR 194

Query: 116 YSEMVIELLETAH 128
               V+++L  AH
Sbjct: 195 LE--VVKMLLNAH 205

Regulator of different signaling pathways. Regulates EPHA8 receptor tyrosine kinase signaling to control cell migration and neurite retraction.

Homo sapiens (taxid: 9606)

>sp|Q9HFE7|YNW5_SCHPO Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP16F5.05c PE=4 SV=1

 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 18/124 (14%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           ++EI+E CP  L   +  G++ L +A+  GH  +V  ++                   ++
Sbjct: 18  LDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPYL----------------NK 61

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
           ++I   N   NTA+H A  +G+  + K+L + G D P+  N Y K+P+Y  A  R  + V
Sbjct: 62  EVINAQNESGNTAMHWAALNGHAEICKLLLEAGGD-PHIKNIYEKSPIY-EADIRNQQKV 119

Query: 121 IELL 124
           ++L 
Sbjct: 120 MDLF 123

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 19/108 (17%)

Query: 18  KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA 77
           KG TPL VAAK+G  ++ S+L+Q +      D   +SG+               T LH A
Sbjct: 547 KGFTPLHVAAKYGKLEVASLLLQKSASP---DAAGKSGL---------------TPLHVA 588

Query: 78  VCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             + N  V  +L  QG  +P++A   G TPL++AAK    ++   LLE
Sbjct: 589 AHYDNQKVALLLLDQGA-SPHAAAKNGYTPLHIAAKKNQMDIATSLLE 635

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 20/134 (14%)

Query: 11  LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG--------------- 55
           LL   N  G+T L VAA++G++D+V +L++ +     G  + ++G               
Sbjct: 48  LLAEQNQSGETALYVAAEYGYTDMVKILMKHSDSVLAGT-KAKNGFDAFHIAAKNGNLQV 106

Query: 56  ----IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
               I A+ ++    ++ K TALH A   G+  +V  L  +G D    A + GKT L+ A
Sbjct: 107 LDVLIEANPELSFTFDSSKTTALHTAASQGHGEIVCFLLDKGVDLAAIARSNGKTALHSA 166

Query: 112 AKGRYSEMVIELLE 125
           A+  ++ +V +L+E
Sbjct: 167 ARNGHTVIVKKLIE 180

Arabidopsis thaliana (taxid: 3702)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 19/108 (17%)

Query: 18  KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA 77
           KG TPL VAAK+G   +  +L++        D  P +           A     T LH A
Sbjct: 535 KGFTPLHVAAKYGKVRVAELLLER-------DAHPNA-----------AGKNGLTPLHVA 576

Query: 78  VCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           V H N+ +VK+L  +G  +P+S    G TPL++AAK    E+   LL+
Sbjct: 577 VHHNNLDIVKLLLPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 623

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|Q5ZIJ9|MIB2_CHICK E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus GN=MIB2 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 18/139 (12%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPES------ 54
           + E+L+  P  + N N +G T L++A+  GH D+V +L+Q        D E ++      
Sbjct: 448 VRELLQKYPDKVDNKN-QGRTALQIASYQGHLDVVKILLQAHATVNLRDEEGDTALHYAA 506

Query: 55  -GIGADRQMIRMA--------NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGK 105
            G  AD   + MA        NN K TAL+ AV  G   VV+ L +   D     +++G 
Sbjct: 507 FGNQADVARVLMAKGAGADLLNNAKCTALYVAVSQGFTEVVQALCELNCDVNL-PDSHGD 565

Query: 106 TPLYMAAKGRYSEMVIELL 124
           TPL+ A    Y +++IE+L
Sbjct: 566 TPLHYAITADY-KVIIEIL 583

E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors.

Gallus gallus (taxid: 9031)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q6GQX6|ANKS6_MOUSE Ankyrin repeat and SAM domain-containing protein 6 OS=Mus musculus GN=Anks6 PE=2 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 18/140 (12%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHG--DGEPESGIGADRQMIRMANN 68
           +VNA+   G + L VA++ GH  +V +L++   I  H    GE  +  G+  +++ +   
Sbjct: 127 DVNAQNRLGASVLTVASRGGHLGVVKLLLEAGAIVDHHTPSGESPATGGSGDELLGI--- 183

Query: 69  EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAH 128
              TAL  AV HG+  VV++L + G D  ++A   G +PL +AA       ++  L  A 
Sbjct: 184 ---TALMAAVQHGHEAVVRLLMEWGADPNHTARTVGWSPLMLAA-------LLGKLNVAQ 233

Query: 129 QCPMKAPTERQLCMLQQCTF 148
           Q   K      L +L++  F
Sbjct: 234 QLVEKGANPDHLSVLEKTAF 253

Required for renal function.

Mus musculus (taxid: 10090)

>sp|Q69ZU8|ANKR6_MOUSE Ankyrin repeat domain-containing protein 6 OS=Mus musculus GN=Ankrd6 PE=1 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 32/139 (23%)

Query: 12  LLNVNAK------GDTPLRVAAKFGHSDIVSVLVQTA---KIAQHGD----------GEP 52
           L+N  AK      G TPL +AA  GH  +V +L++      +   GD          G  
Sbjct: 29  LINKGAKVAVTKHGRTPLHLAANKGHLSVVQILLKAGCDLDVQDDGDQTALHRATVVGNT 88

Query: 53  E-------SGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGK 105
           E        G   DRQ     + + NTALHEA  HG     K+L K G  N  + N  G 
Sbjct: 89  EILTALIREGCALDRQ-----DKDGNTALHEAAWHGFSQSAKLLVKAGA-NVLARNKAGN 142

Query: 106 TPLYMAAKGRYSEMVIELL 124
           T L++A +  +S+    LL
Sbjct: 143 TALHLACQNSHSQSTRILL 161

Recruits CKI-epsilon to the beta-catenin degradation complex that consists of AXN1 or AXN2 and GSK3-beta and allows efficient phosphorylation of beta-catenin, thereby inhibiting beta-catenin/Tcf signals.

Mus musculus (taxid: 10090)

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 21/111 (18%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           N  G   L +A+K GH ++VS L+Q            E+ + A       A  + NTALH
Sbjct: 71  NQNGLNALHLASKEGHVEVVSELLQR-----------EANVDA-------ATKKGNTALH 112

Query: 76  EAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            A   G   VVK+L   G + N  S N +  TPLYMAA+  + E+V  LL+
Sbjct: 113 IASLAGQAEVVKVLVTNGANVNAQSQNGF--TPLYMAAQENHLEVVKFLLD 161

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
224127089	217	predicted protein [Populus trichocarpa]	0.720	0.534	0.508	5e-25
224127093	281	predicted protein [Populus trichocarpa]	0.739	0.423	0.475	5e-25
224127104	405	predicted protein [Populus trichocarpa]	0.658	0.261	0.522	2e-24
224127098	399	predicted protein [Populus trichocarpa]	0.658	0.265	0.522	2e-24
224127081	227	predicted protein [Populus trichocarpa]	0.658	0.466	0.522	2e-24
255551947	582	ankyrin repeat-containing protein, putat	0.819	0.226	0.459	9e-24
224157601	254	predicted protein [Populus trichocarpa]	0.664	0.421	0.490	5e-23
255585399	575	ankyrin repeat-containing protein, putat	0.757	0.212	0.448	1e-22
224127079	394	predicted protein [Populus trichocarpa]	0.677	0.276	0.482	2e-22
224127096	219	predicted protein [Populus trichocarpa]	0.677	0.497	0.508	2e-22

>gi|224127089|ref|XP_002329390.1| predicted protein [Populus trichocarpa] gi|222870440|gb|EEF07571.1| predicted protein [Populus trichocarpa]

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 6/122 (4%)

Query: 4   ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           ILE+CP LLL  N KG+ PL +AA++GHS++V VL+  AK       +PESG+   ++M+
Sbjct: 60  ILEMCPPLLLQANEKGEIPLHLAARYGHSNVVKVLIDCAKALP---TDPESGLTKAQKML 116

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK---GRYSEMV 120
           RMAN E++TALHEA  +   H+V+ILTK+ P+  YSAN +G+TPLY+AA    GR  E V
Sbjct: 117 RMANEEQDTALHEAARNRRSHLVEILTKEDPEFSYSANVHGETPLYIAAASSWGREREKV 176

Query: 121 IE 122
           I+
Sbjct: 177 ID 178

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127093|ref|XP_002329392.1| predicted protein [Populus trichocarpa] gi|222870442|gb|EEF07573.1| predicted protein [Populus trichocarpa]

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 90/124 (72%), Gaps = 5/124 (4%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           +++ILE+CP LLL  N KG+ PL +AA++GHS++V VL++ A+       +PESG+   +
Sbjct: 57  VDKILEMCPPLLLQANKKGEIPLHLAARYGHSNVVGVLIERAEALP---TDPESGVSEAK 113

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK--GRYSE 118
           +M+RM N+E++TALHEA  +   HVV+ILT++ P+  YSAN +G+TPLY+AA   G+  E
Sbjct: 114 KMLRMTNDEQDTALHEAARNMRSHVVEILTEEDPEFSYSANVHGETPLYIAASSWGQEQE 173

Query: 119 MVIE 122
            VI+
Sbjct: 174 KVID 177

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127104|ref|XP_002329397.1| predicted protein [Populus trichocarpa] gi|222870447|gb|EEF07578.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%), Gaps = 3/109 (2%)

Query: 4   ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           ILE+CP LL   N KG+ PL +AA +GHS++V VL+  AK       + ESG+   ++M+
Sbjct: 68  ILEMCPPLLFQANKKGEIPLHLAAAYGHSNVVKVLIDRAKALP---TDSESGVTEAKKML 124

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           RM N E++TALHEA  H   HVV+ILTK+ P+ PYSAN +G+TPLY+AA
Sbjct: 125 RMTNEEQDTALHEAARHRRSHVVEILTKEDPEFPYSANVHGETPLYIAA 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127098|ref|XP_002329394.1| predicted protein [Populus trichocarpa] gi|222870444|gb|EEF07575.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%), Gaps = 3/109 (2%)

Query: 4   ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           ILE+CP LL   N KG+ PL +AA +GHS++V VL+  AK       + ESG+   ++M+
Sbjct: 62  ILEMCPPLLFQANKKGEIPLHLAAAYGHSNVVKVLIDRAKALP---TDSESGVTEAKKML 118

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           RM N E++TALHEA  H   HVV+ILTK+ P+ PYSAN +G+TPLY+AA
Sbjct: 119 RMTNEEQDTALHEAARHRRSHVVEILTKEDPEFPYSANVHGETPLYIAA 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127081|ref|XP_002329387.1| predicted protein [Populus trichocarpa] gi|222870437|gb|EEF07568.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%), Gaps = 3/109 (2%)

Query: 4   ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           ILE+CP LL   N KG+ PL +AA +GHS++V VL+  AK       + ESG+   ++M+
Sbjct: 68  ILEMCPPLLFQANKKGEIPLHLAAAYGHSNVVKVLIDRAKALP---TDSESGVTEAKKML 124

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           RM N E++TALHEA  H   HVV+ILTK+ P+ PYSAN +G+TPLY+AA
Sbjct: 125 RMTNEEQDTALHEAARHRRSHVVEILTKEDPEFPYSANVHGETPLYIAA 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551947|ref|XP_002517018.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223543653|gb|EEF45181.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 3/135 (2%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           ++E L+LCPSLL   N+ GD PL +AA++GH DIV +L++ AK AQ+ D   E+G GA +
Sbjct: 101 VKEALQLCPSLLWKNNSNGDAPLHIAARYGHIDIVKLLLEQAK-AQNED--LETGRGAMK 157

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
           QM +M N +K+ ALHEA  + ++ VV++LT+  P   Y AN+Y +TPLY+AA   Y  +V
Sbjct: 158 QMWQMQNEKKDMALHEAARNNHLSVVRLLTRLDPHFLYPANDYEETPLYLAAARGYLYVV 217

Query: 121 IELLETAHQCPMKAP 135
           IE+L T        P
Sbjct: 218 IEILNTCKSVAYGGP 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224157601|ref|XP_002337868.1| predicted protein [Populus trichocarpa] gi|222869936|gb|EEF07067.1| predicted protein [Populus trichocarpa]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 78/110 (70%), Gaps = 3/110 (2%)

Query: 3   EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQM 62
           +ILE CP LL   N KG+TPL +AA++GH+++V +L++ A+       +PES +   + M
Sbjct: 67  KILERCPPLLFQANKKGETPLHLAARYGHANVVKLLIERAEALP---SDPESRVTKAKMM 123

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           +RM N E++TALHEA  +   HVV+ILTK+ P+ PYSAN  G+TPLY+AA
Sbjct: 124 LRMTNGERDTALHEAARNNQSHVVEILTKEDPEFPYSANVDGETPLYIAA 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585399|ref|XP_002533395.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223526769|gb|EEF28995.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 89/125 (71%), Gaps = 3/125 (2%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           ++E L++CP +LL +NA GDT L +AA++GH DIV +L++  + AQH D   ES   A R
Sbjct: 77  VKEALDMCPQILLQINADGDTLLHIAARYGHLDIVKLLIEHTR-AQHQD--LESAGEAVR 133

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
           QM+RM N  K TALHEA  + +  +V++L +Q PD  +S+N++G+TPLY+A++  + E+V
Sbjct: 134 QMLRMTNKSKETALHEAARNDHPDLVELLIEQDPDFVHSSNDFGETPLYLASERGHLEVV 193

Query: 121 IELLE 125
           + +L+
Sbjct: 194 VIMLK 198

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127079|ref|XP_002329386.1| predicted protein [Populus trichocarpa] gi|224127100|ref|XP_002329395.1| predicted protein [Populus trichocarpa] gi|222870436|gb|EEF07567.1| predicted protein [Populus trichocarpa] gi|222870445|gb|EEF07576.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 77/112 (68%), Gaps = 3/112 (2%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           +++ LE CP LL   N +G+TPL +AA+ GHS++V VL+  AK       +PESG+   +
Sbjct: 53  VDKFLERCPPLLFQANKRGETPLHLAARNGHSNVVKVLIDRAKALP---ADPESGVTKAK 109

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
            M+RM N E++TALHEA  +   HVV+ILTK+ P+  Y AN +G+TPLY+AA
Sbjct: 110 MMLRMTNEEQDTALHEAARNRRSHVVEILTKEDPEFSYPANVHGETPLYIAA 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127096|ref|XP_002329393.1| predicted protein [Populus trichocarpa] gi|222870443|gb|EEF07574.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 82/112 (73%), Gaps = 3/112 (2%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           +++ILE+CP LLL  N KG+ PL +AA++GHS++V VL+  A+ A+  D  PESG+   +
Sbjct: 57  VDKILEMCPPLLLQANKKGEIPLHLAARYGHSNVVRVLIDRAR-ARPTD--PESGVTEAK 113

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           +M+RM N E++TALHEA  +   HVV+ILTK+ P   YSAN + +TPLY+AA
Sbjct: 114 KMLRMTNVEQDTALHEAARNRRGHVVEILTKEDPYFSYSANVHEETPLYIAA 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
TAIR|locus:2020833	616	AT1G03670 "AT1G03670" [Arabido	0.720	0.188	0.330	4e-09
TAIR|locus:2138391	572	AT4G05040 "AT4G05040" [Arabido	0.751	0.211	0.330	5.9e-09
TAIR|locus:2170081	535	AT5G50140 "AT5G50140" [Arabido	0.776	0.233	0.279	1.1e-08
TAIR|locus:2129690	670	ACD6 "AT4G14400" [Arabidopsis	0.763	0.183	0.304	3.3e-08
WB|WBGene00004053	2276	pme-5 [Caenorhabditis elegans	0.763	0.054	0.351	4.1e-08
TAIR|locus:2128771	641	AT4G03450 "AT4G03450" [Arabido	0.664	0.166	0.330	8.2e-08
TAIR|locus:2031948	627	AT1G05640 "AT1G05640" [Arabido	0.416	0.106	0.343	9.3e-08
POMBASE|SPBP16F5.05c	146	SPBP16F5.05c "ribosome biogene	0.652	0.719	0.292	1.8e-07
UNIPROTKB|E1C898	1155	ANKS1A "Uncharacterized protei	0.819	0.114	0.340	3.6e-07
TAIR|locus:2129685	694	AT4G14390 "AT4G14390" [Arabido	0.670	0.155	0.315	8.4e-07

TAIR|locus:2020833 AT1G03670 "AT1G03670" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 42/127 (33%), Positives = 64/127 (50%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             +E I+   P+LL NVN  G+T L VAA+ G  +IV +LV+    +   D           
Sbjct:    88 VEFIISTFPNLLQNVNLMGETTLHVAARAGSLNIVEILVRFITESSSYDA---------- 137

Query:    61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
               I   +   +TALH A+   +V V   L     D  +  NN   +PLYMA +  Y E+V
Sbjct:   138 -FIAAKSKNGDTALHAALKGKHVEVAFCLVSVKHDVSFDKNNDEASPLYMAVEAGYHELV 196

Query:   121 IELLETA 127
             +++LE++
Sbjct:   197 LKMLESS 203

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2138391 AT4G05040 "AT4G05040" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 43/130 (33%), Positives = 64/130 (49%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             ++ I+  CP L+L +N K   PL VAA  GHS IV  LV  A +    D   E     DR
Sbjct:   131 VKNIISECPCLVLELNFKDQLPLHVAAHAGHSAIVEALV--ASVTFFSDRLAEE----DR 184

Query:    61 QMIR---MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYS 117
             + +    + +   NTALH A+    + +   L  +  +  +  NN G + LYMA +    
Sbjct:   185 ERLNPYVLRDKYGNTALHLAIEGRYMEMAASLVNENQNASFLENNEGISSLYMAVEAGDV 244

Query:   118 EMVIELLETA 127
              +V E+L+TA
Sbjct:   245 TLVKEILKTA 254

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2170081 AT5G50140 "AT5G50140" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 36/129 (27%), Positives = 72/129 (55%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             +++I+E+ PSL+ + N K DTPL +AA+ GH+ I+ +++++   A+  +   E+ +  D 
Sbjct:    43 VKKIVEIHPSLVSSTNTKSDTPLHLAARLGHTSILLLMLEST--AESIESLEET-VPNDL 99

Query:    61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN-NYGKTPLYMAAKGRYSEM 119
             ++  M N +  T LH AV +G+V  +     + P +  S      +T  ++AA+ +  E 
Sbjct:   100 KLAEMVNKDGFTPLHCAVMNGSVETLTAFINKAPLSFDSVTLQTSETVFHLAARHKKMEA 159

Query:   120 VIELLETAH 128
              I + + A+
Sbjct:   160 FIFMAKNAN 168

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2129690 ACD6 "AT4G14400" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             ++EI+  CP LL   N+   TPL VA   GH+ +V  LV +   A       ES  G + 
Sbjct:   117 VKEIIFECPCLLFEQNSSRQTPLHVATHGGHTKVVEALVASVTSALASLSTEESE-GLNP 175

Query:    61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA--AKGRYSE 118
              +++  + + NTAL+ A+    + +   L     D P+  NN G + LY A  A  ++ +
Sbjct:   176 HVLK--DEDGNTALYYAIEGRYLEMATCLVNADKDAPFLGNNKGISSLYEAVDAGNKFED 233

Query:   119 MVIELLET 126
             +V  +L+T
Sbjct:   234 LVKAILKT 241

GO:0008219 "cell death" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0016020 "membrane" evidence=ISS;IDA

GO:0009615 "response to virus" evidence=IEP

WB|WBGene00004053 pme-5 [Caenorhabditis elegans (taxid:6239)]

 Score = 142 (55.0 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 45/128 (35%), Positives = 65/128 (50%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             ME +L+   S+ + +  + +TPL VAA+ G +   + L++     + GD + ES I ADR
Sbjct:   395 MEFLLKNGGSVTM-LTKQTETPLHVAARAGRAVNCTFLMKEMLDLEKGD-DGESTIRADR 452

Query:    61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP---DNPYSANNYGKTPLYMAAKGRYS 117
              +I       N+ALH AV   N+ VV  L  +     DNP S      TPL MA    Y 
Sbjct:   453 SIINARTRSGNSALHLAVLRNNLDVVDALLAEPTIVVDNPTSTGQNRLTPLMMACGKGYL 512

Query:   118 EMVIELLE 125
             EM  +L+E
Sbjct:   513 EMAKKLVE 520

GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA

GO:0006471 "protein ADP-ribosylation" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006974 "response to DNA damage stimulus" evidence=IEP

GO:0043069 "negative regulation of programmed cell death" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IEP

TAIR|locus:2128771 AT4G03450 "AT4G03450" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 37/112 (33%), Positives = 56/112 (50%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             ++ I+  CP LLL  N+K   PL  AA  G   +V   V  A++ +  DG  E     +R
Sbjct:    87 VKRIVSECPCLLLETNSKDQIPLHAAAAAGRLAVVEAFV--ARVNEISDGLSEEE--RER 142

Query:    61 -QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
               +  M + + NTALH A+  G++     L K      + ANN+G +PL+ A
Sbjct:   143 VNLYAMKDIDGNTALHLALKGGHLKTAACLVKANHLASFLANNHGVSPLFTA 194

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2031948 AT1G05640 "AT1G05640" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query:    59 DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
             D  + ++A N   TALH A   G+  VVK L        +  +  G+T L+MA KG+   
Sbjct:   245 DSHLAKIAKNNGKTALHSAARMGHREVVKSLIGNDASIGFRTDKKGQTALHMAVKGQNEG 304

Query:   119 MVIELLE 125
             +V+EL++
Sbjct:   305 IVLELVK 311

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

POMBASE|SPBP16F5.05c SPBP16F5.05c "ribosome biogenesis protein Nop8 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 36/123 (29%), Positives = 62/123 (50%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             ++EI+E CP  L   +  G++ L +A+  GH  +V       KI  +           ++
Sbjct:    18 LDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQ------KIIPY----------LNK 61

Query:    61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
             ++I   N   NTA+H A  +G+  + K+L + G D P+  N Y K+P+Y  A  R  + V
Sbjct:    62 EVINAQNESGNTAMHWAALNGHAEICKLLLEAGGD-PHIKNIYEKSPIY-EADIRNQQKV 119

Query:   121 IEL 123
             ++L
Sbjct:   120 MDL 122

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0030688 "preribosome, small subunit precursor" evidence=ISS

GO:0042254 "ribosome biogenesis" evidence=ISS

UNIPROTKB|E1C898 ANKS1A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 130 (50.8 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 49/144 (34%), Positives = 72/144 (50%)

Query:     3 EILELCPSLLLNV-NAKGDTPLRVAAKFGHSDIVSVLVQTA----KIAQHGDGEPES--G 55
             E+L L    L NV + KG  PL +AA  G +DIV +L+       K+ +    E +    
Sbjct:   104 EVL-LRNDALTNVADCKGCYPLHLAAWKGDADIVKLLIHQGPSHTKVNEQNALEIKELKK 162

Query:    56 IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK-G 114
              G     I   NN+  TALH A  +G+  VVK+L ++  D P   NN  +TPL +AA  G
Sbjct:   163 YGPFDPYINAKNNDNETALHCAAQYGHTEVVKVLLEELTD-PTMRNNKFETPLDLAALYG 221

Query:   115 RYSEMVIELLETAHQCPMKAPTER 138
             R    V+++L  AH   +   T++
Sbjct:   222 RLE--VVKMLLNAHPNLLSCNTKK 243

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006929 "substrate-dependent cell migration" evidence=IEA

GO:0016322 "neuron remodeling" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0046875 "ephrin receptor binding" evidence=IEA

GO:0048013 "ephrin receptor signaling pathway" evidence=IEA

TAIR|locus:2129685 AT4G14390 "AT4G14390" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 8.4e-07, P = 8.4e-07
 Identities = 35/111 (31%), Positives = 54/111 (48%)

Query:     1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
             ++EI+  CP LLL  N+ G TPL VAA  GH+ IV   V     +       ES    + 
Sbjct:   148 VKEIVCECPRLLLEQNSSGQTPLHVAAHSGHTTIVEAFVALVTFSSARLCNEESE-RMNP 206

Query:    61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
              +++  + + NTAL+ A+      +   L     D P+  N YG + L++A
Sbjct:   207 YVLK--DKDGNTALYYAIEGRYFEMAVCLVNANQDAPFLGNKYGVSSLFVA 255

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01200022	hypothetical protein (281 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pg.C_LG_I003169	hypothetical protein (278 aa)			•						0.449
	eugene3.00051263	annotation not avaliable (398 aa)			•						0.409
	gw1.57.246.1	hypothetical protein (392 aa)			•						0.406

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	161
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-07
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-05
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	3e-04
smart00248	30	smart00248, ANK, ankyrin repeats	7e-04

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 73.6 bits (181), Expect = 1e-17
 Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 22/127 (17%)

Query: 1   MEEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIG 57
             E+++L      +VNAK   G TPL +AAK GH +IV +L++                G
Sbjct: 19  HLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEK---------------G 63

Query: 58  ADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYS 117
           AD   +   + + NT LH A  +GN+ VVK+L K G  +  + +  G+TPL++AAK  + 
Sbjct: 64  AD---VNARDKDGNTPLHLAARNGNLDVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGHL 119

Query: 118 EMVIELL 124
           E+V  LL
Sbjct: 120 EVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 73.6 bits (181), Expect = 1e-17
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 19/111 (17%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
            +  G TPL +AA  GH ++V +L++                GAD   +   +N+  T L
Sbjct: 3   RDEDGRTPLHLAASNGHLEVVKLLLE---------------NGAD---VNAKDNDGRTPL 44

Query: 75  HEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           H A  +G++ +VK+L ++G D   + +  G TPL++AA+    ++V  LL+
Sbjct: 45  HLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLK 94

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 59.6 bits (145), Expect = 1e-12
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 21/103 (20%)

Query: 23  LRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN 82
           L +AAK G+ ++V +L++                GAD     +   + +TALH A  +GN
Sbjct: 1   LHLAAKNGNLELVKLLLE---------------KGAD-----VNLGDTDTALHLAARNGN 40

Query: 83  VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           + +VK+L + G D   + +  G T L++AA+    E+V  LLE
Sbjct: 41  LEIVKLLLEHGAD-VNAKDKDGNTALHLAARNGNLEIVKLLLE 82

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 53.0 bits (128), Expect = 4e-10
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 18/76 (23%)

Query: 20 DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC 79
          DT L +AA+ G+ +IV +L++                GAD   +   + + NTALH A  
Sbjct: 29 DTALHLAARNGNLEIVKLLLE---------------HGAD---VNAKDKDGNTALHLAAR 70

Query: 80 HGNVHVVKILTKQGPD 95
          +GN+ +VK+L + G D
Sbjct: 71 NGNLEIVKLLLEHGAD 86

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 47.1 bits (111), Expect = 6e-07
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 14/127 (11%)

Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           ++I++L  +   +VNAK   GDTPL +AA  G+    ++ V    +    D +       
Sbjct: 86  DKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV-----N 140

Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
           + +         NT LH A  +G+  +V++L + G  +P S N+YG T L  AAK    E
Sbjct: 141 NLRDEDG-----NTPLHWAALNGDADIVELLLEAGA-DPNSRNSYGVTALDPAAKNGRIE 194

Query: 119 MVIELLE 125
           +V  LL+
Sbjct: 195 LVKLLLD 201

Length = 235

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            TALH+A   G + +VK L ++G D     +  G T L++AA+    E++  LL
Sbjct: 2   RTALHKAAISGRLELVKYLLEKGVD-INRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +    T LH AV + N   VK L   G  NP   N YG TPL++A      E+   LL 
Sbjct: 189 DVYGFTPLHYAVYNNNPEFVKYLLDLGA-NPNLVNKYGDTPLHIAILNNNKEIFKLLLN 246

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.4 bits (90), Expect = 8e-05
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 18/71 (25%)

Query: 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
          G T L  AA  G  ++V  L++                G D   I   + + NTALH A 
Sbjct: 1  GRTALHKAAISGRLELVKYLLEK---------------GVD---INRTDEDGNTALHIAA 42

Query: 79 CHGNVHVVKIL 89
           +GN+ V+K+L
Sbjct: 43 ENGNLEVLKLL 53

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 89  LTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           L + GP +  + +  G TPL++AAK    E+V  LL+
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLK 37

Length = 56

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 71 NTALHEAVCHGNVHVVKILTKQGPD 95
          NT LH A  +G++ VVK+L + G D
Sbjct: 3  NTPLHLAARNGHLEVVKLLLEAGAD 27

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 34.9 bits (81), Expect = 7e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 69 EKNTALHEAVCHGNVHVVKILTKQGPD 95
          +  T LH A  +GN+ VVK+L  +G D
Sbjct: 1  DGRTPLHLAAENGNLEVVKLLLDKGAD 27

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.97
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.97
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.94
PHA02791	284	ankyrin-like protein; Provisional	99.93
PHA02791	284	ankyrin-like protein; Provisional	99.93
PHA02874	434	ankyrin repeat protein; Provisional	99.92
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.92
PHA02859	209	ankyrin repeat protein; Provisional	99.92
PHA02875	413	ankyrin repeat protein; Provisional	99.92
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.92
PHA02878	477	ankyrin repeat protein; Provisional	99.92
PHA02741	169	hypothetical protein; Provisional	99.92
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.92
PHA02874	434	ankyrin repeat protein; Provisional	99.91
PHA02875	413	ankyrin repeat protein; Provisional	99.91
PHA02946	446	ankyin-like protein; Provisional	99.91
PHA02859	209	ankyrin repeat protein; Provisional	99.91
PHA03100	480	ankyrin repeat protein; Provisional	99.9
PHA02743	166	Viral ankyrin protein; Provisional	99.9
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.9
PHA02878	477	ankyrin repeat protein; Provisional	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.9
PHA03095	471	ankyrin-like protein; Provisional	99.9
PHA02798	489	ankyrin-like protein; Provisional	99.9
PHA02743	166	Viral ankyrin protein; Provisional	99.89
PHA02736	154	Viral ankyrin protein; Provisional	99.89
PHA03095	471	ankyrin-like protein; Provisional	99.89
PHA02946	446	ankyin-like protein; Provisional	99.89
PHA02876	682	ankyrin repeat protein; Provisional	99.89
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.89
PHA02876	682	ankyrin repeat protein; Provisional	99.89
PHA03100	480	ankyrin repeat protein; Provisional	99.88
PHA02989	494	ankyrin repeat protein; Provisional	99.88
KOG0510	929	consensus Ankyrin repeat protein [General function	99.88
PHA02884	300	ankyrin repeat protein; Provisional	99.88
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.88
KOG0508	615	consensus Ankyrin repeat protein [General function	99.88
PHA02795	437	ankyrin-like protein; Provisional	99.88
KOG0510	929	consensus Ankyrin repeat protein [General function	99.88
KOG0508	615	consensus Ankyrin repeat protein [General function	99.88
PHA02798	489	ankyrin-like protein; Provisional	99.87
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.87
PHA02730	672	ankyrin-like protein; Provisional	99.86
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.85
PHA02917	661	ankyrin-like protein; Provisional	99.85
KOG0514	452	consensus Ankyrin repeat protein [General function	99.85
PHA02917	661	ankyrin-like protein; Provisional	99.84
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.84
PHA02884	300	ankyrin repeat protein; Provisional	99.84
PHA02741	169	hypothetical protein; Provisional	99.83
PHA02736	154	Viral ankyrin protein; Provisional	99.83
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.83
PHA02989	494	ankyrin repeat protein; Provisional	99.83
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.83
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.82
PHA02795	437	ankyrin-like protein; Provisional	99.81
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.81
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.81
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.79
PHA02792	631	ankyrin-like protein; Provisional	99.78
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.78
PHA02730	672	ankyrin-like protein; Provisional	99.77
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.76
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.74
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.73
PHA02792	631	ankyrin-like protein; Provisional	99.71
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.7
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.69
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.69
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.66
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.66
KOG0514	452	consensus Ankyrin repeat protein [General function	99.64
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.64
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.64
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.63
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.62
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.62
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.61
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.59
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.58
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.58
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.57
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.54
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.47
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.46
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.42
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.34
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.33
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	99.19
PF13606	30	Ank_3: Ankyrin repeat	99.17
KOG0783	1267	consensus Uncharacterized conserved protein, conta	99.15
PF13606	30	Ank_3: Ankyrin repeat	99.14
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	99.13
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	99.13
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	99.11
KOG0783	1267	consensus Uncharacterized conserved protein, conta	99.04
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	99.02
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.98
KOG0522	560	consensus Ankyrin repeat protein [General function	98.91
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.84
KOG0511	516	consensus Ankyrin repeat protein [General function	98.83
KOG0522	560	consensus Ankyrin repeat protein [General function	98.69
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.66
KOG2384	223	consensus Major histocompatibility complex protein	98.63
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.62
KOG0511	516	consensus Ankyrin repeat protein [General function	98.58
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.55
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.5
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.49
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.42
KOG2384	223	consensus Major histocompatibility complex protein	98.37
KOG0520	975	consensus Uncharacterized conserved protein, conta	98.3
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.96
KOG2505	591	consensus Ankyrin repeat protein [General function	97.82
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.7
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.68
KOG2505	591	consensus Ankyrin repeat protein [General function	97.6
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.45
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	95.96
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	94.36
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	93.88
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	93.51

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=8.7e-32  Score=167.98  Aligned_cols=144  Identities=22%  Similarity=0.250  Sum_probs=111.2

Q ss_pred             ChhHHHhCCccccccCC-CCCcHHHHHHHhCCHHHHHHHH-HhhHhhhcCCCCCCCccchh----------------hhh
Q 037410            1 MEEILELCPSLLLNVNA-KGDTPLRVAAKFGHSDIVSVLV-QTAKIAQHGDGEPESGIGAD----------------RQM   62 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~-~g~t~lh~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~~~~----------------~~~   62 (161)
                      ++++++..+..++.++. +|+|||||||+.|+.+++++|+ +.+..++..|..+..+++..                ...
T Consensus        19 veel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad   98 (226)
T KOG4412|consen   19 VEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD   98 (226)
T ss_pred             HHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC
Confidence            35677777766666665 8889999999999989888888 44556666666666665431                233


Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM  142 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  142 (161)
                      ++..+..|.|+||+|+..|..|++.+|++.|+. ++.+|..|.||||-|+.-|..+++++|+..|+.+|..|..|+||||
T Consensus        99 vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~-i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~  177 (226)
T KOG4412|consen   99 VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL-IRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLH  177 (226)
T ss_pred             cceecCCCcceehhhhcCChhhHHHHHHhcCCC-CcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHH
Confidence            455677788888888888888888888888877 7888888888888888888888888888888888888888888888


Q ss_pred             HHH
Q 037410          143 LQQ  145 (161)
Q Consensus       143 ~~~  145 (161)
                      .+.
T Consensus       178 ~al  180 (226)
T KOG4412|consen  178 HAL  180 (226)
T ss_pred             HHH
Confidence            863

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=1.7e-30  Score=162.27  Aligned_cols=149  Identities=21%  Similarity=0.304  Sum_probs=125.8

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccch---------------hhhhhhhhc
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGA---------------DRQMIRMAN   67 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~   67 (161)
                      |++..+..++.+|..||||||.||..|+.++|+.|+.+ |++++..+.-+.++++-               ....++.+|
T Consensus        57 Llsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD  136 (226)
T KOG4412|consen   57 LLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKD  136 (226)
T ss_pred             HHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccc
Confidence            44455667777788899999999999999999999988 88888877777766642               134567899


Q ss_pred             CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410           68 NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus        68 ~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      ..|.||||-|+.-|..+++++|+..|+. .+.+|..|+||||.|..-++.+...+|+++|++.+..|++| ||+-. .+.
T Consensus       137 ~~~qtplHRAAavGklkvie~Li~~~a~-~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~-a~~  213 (226)
T KOG4412|consen  137 KQGQTPLHRAAAVGKLKVIEYLISQGAP-LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRI-ACN  213 (226)
T ss_pred             cccCchhHHHHhccchhhHHHHHhcCCC-CCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHH-HHH
Confidence            9999999999999999999999999987 89999999999999988999999999999999999999988 99764 455


Q ss_pred             HHHHHHHh
Q 037410          148 FILLSLTR  155 (161)
Q Consensus       148 ~~~~~l~~  155 (161)
                      .+...+++
T Consensus       214 ~l~~alk~  221 (226)
T KOG4412|consen  214 ELLEALKE  221 (226)
T ss_pred             HHHHHHHH
Confidence            55555555

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.94  E-value=1.1e-26  Score=168.42  Aligned_cols=138  Identities=24%  Similarity=0.274  Sum_probs=123.8

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHh
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVC   79 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~   79 (161)
                      ++++++..+..++.+|.+|.|+||+||.+++.+++++|+++|+++|.                  .. .-+.||||||++
T Consensus        60 v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~------------------~gG~l~stPLHWAar  121 (600)
T KOG0509|consen   60 VKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNA------------------IGGVLGSTPLHWAAR  121 (600)
T ss_pred             HHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccc------------------cCCCCCCCcchHHHH
Confidence            46777777899999999999999999999999999999999999776                  34 567899999999


Q ss_pred             cCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHH---HHHHHhh
Q 037410           80 HGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFI---LLSLTRY  156 (161)
Q Consensus        80 ~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~---~~~l~~~  156 (161)
                      .|+..++.+|++.|++ ++.+|..|.+|+|+|++.++.-.+-+|+.+|++++.+|.+|+|||++|.+...   ...|+++
T Consensus       122 ~G~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f  200 (600)
T KOG0509|consen  122 NGHISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKF  200 (600)
T ss_pred             cCcHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHh
Confidence            9999999999999999 89999999999999999999999999999999999999999999999776554   3455554


Q ss_pred             h
Q 037410          157 S  157 (161)
Q Consensus       157 ~  157 (161)
                      .
T Consensus       201 ~  201 (600)
T KOG0509|consen  201 G  201 (600)
T ss_pred             c
Confidence            4

>PHA02791 ankyrin-like protein; Provisional

Probab=99.93  E-value=4.1e-25  Score=152.37  Aligned_cols=138  Identities=15%  Similarity=0.078  Sum_probs=87.6

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCC-Cccchh---------hhhhh----hhc-C
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPE-SGIGAD---------RQMIR----MAN-N   68 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~~~~---------~~~~~----~~~-~   68 (161)
                      +|...++.++.+|..|+||||+|+..|+.+++++|++.|++++..+..+. .++...         ..++.    ..+ .
T Consensus        79 lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~  158 (284)
T PHA02791         79 ILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLA  158 (284)
T ss_pred             HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccc
Confidence            34455677777788888888888888888888888888877665544432 222211         11111    112 2


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcH-HHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTP-LYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~-l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      .|.||||+|+..|+.+++++|++.|++ ++.++..|.|| ||+|+..|+.+++++|+++|++++.+|.. .+++..
T Consensus       159 ~g~TpLh~Aa~~g~~eiv~lLL~~gAd-~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~-~~~l~~  232 (284)
T PHA02791        159 ILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLE-NVLLDD  232 (284)
T ss_pred             cCccHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCccc-CccCCC
Confidence            356777777777777777777777766 56666666655 77777777777777777777777777663 355543

>PHA02791 ankyrin-like protein; Provisional

Probab=99.93  E-value=2e-24  Score=148.95  Aligned_cols=148  Identities=18%  Similarity=0.153  Sum_probs=86.3

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch---------------hhhhhhhh
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA---------------DRQMIRMA   66 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~   66 (161)
                      .++|...++  +.+|.+|+||||+|+..|+.+++++|++.|+.++..+.  .++++.               ....++.+
T Consensus        15 ~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d~--~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~   90 (284)
T PHA02791         15 KSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLEN--EFPLHQAATLEDTKIVKILLFSGMDDSQF   90 (284)
T ss_pred             HHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCCC--CCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Confidence            345555544  46889999999999999999999999999987654321  222211               11223344


Q ss_pred             cCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCC-CcHHHHHHhCCChHHHHHHHhcCCCCCCCC-CcccchHHHH
Q 037410           67 NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYG-KTPLYMAAKGRYSEMVIELLETAHQCPMKA-PTERQLCMLQ  144 (161)
Q Consensus        67 ~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~-~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~~  144 (161)
                      +..|.||||+|+..|+.+++++|++.|++ ++.++..| .||||+|+..|+.+++++|++++.+.  .+ ..|+||||+|
T Consensus        91 d~~G~TpLh~Aa~~g~~eivk~Ll~~gad-in~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~A  167 (284)
T PHA02791         91 DDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHIT  167 (284)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHH
Confidence            55566666666666666666666666655 44445444 35666666666666666666554322  12 1355666653


Q ss_pred             ---HhHHHHHHHHhh
Q 037410          145 ---QCTFILLSLTRY  156 (161)
Q Consensus       145 ---~~~~~~~~l~~~  156 (161)
                         +...+.+.|..+
T Consensus       168 a~~g~~eiv~lLL~~  182 (284)
T PHA02791        168 IKNGHVDMMILLLDY  182 (284)
T ss_pred             HHcCCHHHHHHHHHC
Confidence               333444444443

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.92  E-value=1.6e-24  Score=158.57  Aligned_cols=154  Identities=19%  Similarity=0.205  Sum_probs=122.2

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------------
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------------   59 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------------   59 (161)
                      |+.+++..+..++..+.+|.||||.|+..|+.+++++|++.|++++..+..+..++...                     
T Consensus        17 v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~   96 (434)
T PHA02874         17 IEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSI   96 (434)
T ss_pred             HHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence            35667777777888888899999999999999999999998888777665554443211                     


Q ss_pred             -----------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHH
Q 037410           60 -----------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE  122 (161)
Q Consensus        60 -----------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~  122 (161)
                                       +..++..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++
T Consensus        97 ~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~  175 (434)
T PHA02874         97 LPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKL  175 (434)
T ss_pred             chhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHH
Confidence                             012344567889999999999999999999999988 78888999999999999999999999


Q ss_pred             HHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410          123 LLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR  155 (161)
Q Consensus       123 Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~  155 (161)
                      |+++|++++..+..|+||+|+|..   ..+.+.|.+
T Consensus       176 Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~  211 (434)
T PHA02874        176 LLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLID  211 (434)
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999999998643   334444443

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.92  E-value=6.7e-25  Score=136.49  Aligned_cols=134  Identities=27%  Similarity=0.225  Sum_probs=118.9

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH   80 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~   80 (161)
                      |++||+..+..+|.+|.+|+||||-|+..|+.++++.|+..|++++.                  +...|+||||.||.-
T Consensus        79 V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a------------------~T~~GWTPLhSAckW  140 (228)
T KOG0512|consen   79 VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA------------------KTNEGWTPLHSACKW  140 (228)
T ss_pred             HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc------------------ccccCccchhhhhcc
Confidence            57899999999999999999999999999999999999999999776                  788999999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCCh-HHHHHHHh-cCCCCCCCCCcccchHHHHHhHHHHHHH
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYS-EMVIELLE-TAHQCPMKAPTERQLCMLQQCTFILLSL  153 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~-~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~~~~~~~~l  153 (161)
                      .+.+|+.+|++.|++ ++.......||||+|+...+. ..+++|+. .+++...++..+.||+.+|....+..-|
T Consensus       141 nN~~va~~LLqhgaD-VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~l  214 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGAD-VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYL  214 (228)
T ss_pred             cchhHHHHHHhccCc-ccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHH
Confidence            999999999999999 888888999999999886654 45565554 5789999999999999998877655443

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.92  E-value=3.1e-24  Score=142.80  Aligned_cols=137  Identities=13%  Similarity=0.126  Sum_probs=105.6

Q ss_pred             ccccCCCCCcHHHHHHHhC--CHHHHHHHHHhhHhhhcCCC-CCCCccch------------------hhhhhhhhcCCC
Q 037410           12 LLNVNAKGDTPLRVAAKFG--HSDIVSVLVQTAKIAQHGDG-EPESGIGA------------------DRQMIRMANNEK   70 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~g--~~~~v~~Ll~~~~~~~~~~~-~~~~~~~~------------------~~~~~~~~~~~g   70 (161)
                      ++..|..|.||||+|+..+  +.+++++|++.|++++..+. .+.++++.                  .+..++.++..|
T Consensus        44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G  123 (209)
T PHA02859         44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDG  123 (209)
T ss_pred             hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCC
Confidence            5677888999999998754  78999999999998887653 34444331                  122345677888


Q ss_pred             ccHHHHHHh--cCcHHHHHHHHHcCCCCccccCCCCCcHHHH-HHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410           71 NTALHEAVC--HGNVHVVKILTKQGPDNPYSANNYGKTPLYM-AAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus        71 ~t~l~~a~~--~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~-A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      .||||+|+.  .++.+++++|++.|++ ++.+|..|.||||. |+..++.+++++|+++|++++.+|..|+||++++...
T Consensus       124 ~TpLh~a~~~~~~~~~iv~~Li~~gad-in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        124 KNLLHMYMCNFNVRINVIKLLIDSGVS-FLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             CCHHHHHHHhccCCHHHHHHHHHcCCC-cccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence            888888765  3578888888888887 77888888889885 5567788888888888888888888889998887665


Q ss_pred             HH
Q 037410          148 FI  149 (161)
Q Consensus       148 ~~  149 (161)
                      .+
T Consensus       203 ~~  204 (209)
T PHA02859        203 NL  204 (209)
T ss_pred             hh
Confidence            54

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.92  E-value=3e-24  Score=156.32  Aligned_cols=150  Identities=17%  Similarity=0.121  Sum_probs=122.2

Q ss_pred             HhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------hhh-------hhhhcCC
Q 037410            6 ELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------RQM-------IRMANNE   69 (161)
Q Consensus         6 ~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~-------~~~~~~~   69 (161)
                      ...+++++..+..|.||||+|+..|+.+++++|+++|+.++..+..+..+++..         ..+       .+..+..
T Consensus        22 l~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~  101 (413)
T PHA02875         22 LDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKD  101 (413)
T ss_pred             HHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCC
Confidence            345788888999999999999999999999999999998776655554444321         111       1233567


Q ss_pred             CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---h
Q 037410           70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---C  146 (161)
Q Consensus        70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~  146 (161)
                      |.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|.   .
T Consensus       102 g~tpL~~A~~~~~~~iv~~Ll~~gad-~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~  180 (413)
T PHA02875        102 GMTPLHLATILKKLDIMKLLIARGAD-PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGD  180 (413)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence            89999999999999999999999998 7888999999999999999999999999999999999999999999974   3


Q ss_pred             HHHHHHHHhh
Q 037410          147 TFILLSLTRY  156 (161)
Q Consensus       147 ~~~~~~l~~~  156 (161)
                      ..+.+.|.+.
T Consensus       181 ~eiv~~Ll~~  190 (413)
T PHA02875        181 IAICKMLLDS  190 (413)
T ss_pred             HHHHHHHHhC
Confidence            4455555443

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.92  E-value=7e-25  Score=141.26  Aligned_cols=121  Identities=23%  Similarity=0.230  Sum_probs=113.5

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      +......+|..|++|+|||.||+.+|+.++|++|++.|+++..                  ..++..++|..|+.+|+++
T Consensus       146 ~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~------------------lgk~resALsLAt~ggytd  207 (296)
T KOG0502|consen  146 DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA------------------LGKYRESALSLATRGGYTD  207 (296)
T ss_pred             HHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh------------------hhhhhhhhHhHHhcCChHH
Confidence            3445678999999999999999999999999999999999654                  6788899999999999999


Q ss_pred             HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      ++++|+.++.+ ++..|.+|.|||-+|++.+|.+|++.|++.|++++..+..|++++.++
T Consensus       208 iV~lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlA  266 (296)
T KOG0502|consen  208 IVELLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLA  266 (296)
T ss_pred             HHHHHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHH
Confidence            99999999998 899999999999999999999999999999999999999999999884

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.92  E-value=3.2e-24  Score=158.65  Aligned_cols=141  Identities=16%  Similarity=0.101  Sum_probs=106.4

Q ss_pred             hHHHhCCccccccCCC-CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhh
Q 037410            3 EILELCPSLLLNVNAK-GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMA   66 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~-g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~   66 (161)
                      ++|...+++++.+|.. |+||||+|+..|+.+++++|++.|++++..+..+.++++..               +..++.+
T Consensus       151 ~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~  230 (477)
T PHA02878        151 KLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR  230 (477)
T ss_pred             HHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCC
Confidence            3455678889999998 99999999999999999999999999887666666655432               2334556


Q ss_pred             cCCCccHHHHHHhc-CcHHHHHHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           67 NNEKNTALHEAVCH-GNVHVVKILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        67 ~~~g~t~l~~a~~~-~~~~~~~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      +..|.||||+|+.. ++.+++++|++.|++ ++.++. .|.||||+|  .++.+++++|+++|++++..|..|+||+++|
T Consensus       231 d~~g~TpLh~A~~~~~~~~iv~~Ll~~gad-vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A  307 (477)
T PHA02878        231 DKCGNTPLHISVGYCKDYDILKLLLEHGVD-VNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSA  307 (477)
T ss_pred             CCCCCCHHHHHHHhcCCHHHHHHHHHcCCC-CCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence            77777888877754 577788888877777 555554 677888887  3556777888888888888888888888776


Q ss_pred             Hh
Q 037410          145 QC  146 (161)
Q Consensus       145 ~~  146 (161)
                      ..
T Consensus       308 ~~  309 (477)
T PHA02878        308 VK  309 (477)
T ss_pred             HH
Confidence            43

>PHA02741 hypothetical protein; Provisional

Probab=99.92  E-value=7.2e-24  Score=136.83  Aligned_cols=133  Identities=16%  Similarity=0.183  Sum_probs=107.8

Q ss_pred             cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc----HHHH
Q 037410           11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN----VHVV   86 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~----~~~~   86 (161)
                      .++.+|..|.||||+|++.|+.+++++|+......            .....++.+|..|.||||+|+..|+    .+++
T Consensus        13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~------------~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii   80 (169)
T PHA02741         13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGD------------CHAAALNATDDAGQMCIHIAAEKHEAQLAAEII   80 (169)
T ss_pred             HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccc------------hhhhhhhccCCCCCcHHHHHHHcCChHHHHHHH
Confidence            46678899999999999999999999986532000            0011144578899999999999998    5889


Q ss_pred             HHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410           87 KILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQQC---TFILLSLTRY  156 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~  156 (161)
                      ++|+..|++ ++.++. .|.||||+|+..++.+++++|+. .|++++.+|..|+||++++..   ..+...|.++
T Consensus        81 ~~Ll~~gad-in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~  154 (169)
T PHA02741         81 DHLIELGAD-INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREI  154 (169)
T ss_pred             HHHHHcCCC-CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence            999999998 788775 89999999999999999999997 599999999999999999643   3444445444

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.92  E-value=1.1e-24  Score=158.11  Aligned_cols=144  Identities=25%  Similarity=0.217  Sum_probs=110.1

Q ss_pred             hHHHhCCccccccC-CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhh
Q 037410            3 EILELCPSLLLNVN-AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMA   66 (161)
Q Consensus         3 ~ll~~~~~~~~~~~-~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~   66 (161)
                      +.|...++++|... .-+.|||||||++|+..+|++|+++|++++..|..+...++..               ....+.+
T Consensus        95 r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~  174 (600)
T KOG0509|consen   95 RYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLR  174 (600)
T ss_pred             HHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCc
Confidence            45667789999998 5699999999999999999999999999998777776665432               2445667


Q ss_pred             cCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           67 NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        67 ~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      |..|.||||+|+..|....++.|+..++. +..+| ..|.||||+|+..|+.+++.++++.|++.+..|.+|.||++++.
T Consensus       175 D~~grTpLmwAaykg~~~~v~~LL~f~a~-~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~  253 (600)
T KOG0509|consen  175 DNNGRTPLMWAAYKGFALFVRRLLKFGAS-LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQ  253 (600)
T ss_pred             CCCCCCHHHHHHHhcccHHHHHHHHhccc-ccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHH
Confidence            77777777777777776667777777776 44444 67777777777777777777666666777777777777777765


Q ss_pred             hH
Q 037410          146 CT  147 (161)
Q Consensus       146 ~~  147 (161)
                      ..
T Consensus       254 ~~  255 (600)
T KOG0509|consen  254 ER  255 (600)
T ss_pred             Hh
Confidence            44

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.91  E-value=8.3e-24  Score=154.85  Aligned_cols=119  Identities=18%  Similarity=0.147  Sum_probs=81.7

Q ss_pred             HhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHH
Q 037410            6 ELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHV   85 (161)
Q Consensus         6 ~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~   85 (161)
                      ...+.+++.+|..|.||||+|+..|+.+++++|++.|++++.                  ++..|.||||+|+..++.++
T Consensus       111 l~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~------------------~d~~g~tpLh~A~~~~~~~i  172 (434)
T PHA02874        111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNI------------------EDDNGCYPIHIAIKHNFFDI  172 (434)
T ss_pred             HHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCC------------------cCCCCCCHHHHHHHCCcHHH
Confidence            345677888999999999999999999999999999988766                  45555666666666666666


Q ss_pred             HHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           86 VKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        86 ~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      +++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|+||+|+
T Consensus       173 v~~Ll~~g~~-~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~  229 (434)
T PHA02874        173 IKLLLEKGAY-ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHN  229 (434)
T ss_pred             HHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHH
Confidence            6666666555 44555556666666666666666666666655555555555555544

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.91  E-value=1.4e-23  Score=152.80  Aligned_cols=110  Identities=21%  Similarity=0.237  Sum_probs=84.0

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +..|+||||+|+..|+.+++++|++.|++                  .+.++..|.||||+|+..|+.+++++|++.|++
T Consensus        99 ~~~g~tpL~~A~~~~~~~iv~~Ll~~gad------------------~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~  160 (413)
T PHA02875         99 YKDGMTPLHLATILKKLDIMKLLIARGAD------------------PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKAC  160 (413)
T ss_pred             cCCCCCHHHHHHHhCCHHHHHHHHhCCCC------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence            33444444444444444444444444444                  344677899999999999999999999999987


Q ss_pred             CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCccc-chHHHH
Q 037410           96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER-QLCMLQ  144 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-t~l~~~  144 (161)
                       ++.++..|.||||+|+..|+.+++++|+++|++++..+..|. ||+++|
T Consensus       161 -~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A  209 (413)
T PHA02875        161 -LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYA  209 (413)
T ss_pred             -CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHH
Confidence             788899999999999999999999999999999999888875 677764

>PHA02946 ankyin-like protein; Provisional

Probab=99.91  E-value=1.4e-23  Score=153.52  Aligned_cols=139  Identities=14%  Similarity=0.107  Sum_probs=82.3

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh-----------------hhhh-h
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR-----------------QMIR-M   65 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~   65 (161)
                      +|...+++++.+|.+|+||||+|+..|+.+++++|+++|++++..+..+.++++...                 ..++ .
T Consensus        57 ~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~  136 (446)
T PHA02946         57 ELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNS  136 (446)
T ss_pred             HHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccc
Confidence            344567889999999999999999999999999999999998888777766654210                 0011 1


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC--hHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY--SEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~--~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      .+..|.|||| |+..++.+++++|++.|++ ++.+|..|.||||+|+..++  .+++++|+++|++++.+|..|+||||+
T Consensus       137 ~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad-~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~  214 (446)
T PHA02946        137 VDEEGCGPLL-ACTDPSERVFKKIMSIGFE-ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHI  214 (446)
T ss_pred             cCCCCCcHHH-HHHCCChHHHHHHHhcccc-ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            2445555554 3334445555555544444 34444444444444433222  344444444444444444444444444


Q ss_pred             H
Q 037410          144 Q  144 (161)
Q Consensus       144 ~  144 (161)
                      +
T Consensus       215 A  215 (446)
T PHA02946        215 V  215 (446)
T ss_pred             H
Confidence            3

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.91  E-value=2.7e-23  Score=138.28  Aligned_cols=126  Identities=14%  Similarity=0.082  Sum_probs=89.1

Q ss_pred             ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-----------------hhhhhhhc-CCCccHHH
Q 037410           14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD-----------------RQMIRMAN-NEKNTALH   75 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-~~g~t~l~   75 (161)
                      ...+.++||||+|+..|+.++|+.|+...   +..+..+.++++..                 ...++.++ ..|.||||
T Consensus        16 ~~~~~~~~pL~~A~~~~~~~~vk~Li~~~---n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh   92 (209)
T PHA02859         16 YLFYRYCNPLFYYVEKDDIEGVKKWIKFV---NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALH   92 (209)
T ss_pred             HHhhccCcHHHHHHHhCcHHHHHHHHHhh---hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHH
Confidence            34567899999999999999999999763   33333444443311                 12233444 36778888


Q ss_pred             HHHhc---CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHh--CCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           76 EAVCH---GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK--GRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        76 ~a~~~---~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~--~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      +|+..   ++.+++++|++.|++ ++.++..|.||||+|+.  .++.+++++|+++|++++.+|..|+||+|.
T Consensus        93 ~a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~  164 (209)
T PHA02859         93 HYLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYS  164 (209)
T ss_pred             HHHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHH
Confidence            76643   367788888887777 67778888888887765  356778888888888888888888888874

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.90  E-value=4.5e-23  Score=152.71  Aligned_cols=151  Identities=19%  Similarity=0.139  Sum_probs=121.0

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhC--CHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFG--HSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMA   66 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~   66 (161)
                      +|...++.++..+..|.||||+|+..|  +.+++++|+++|++++..+..+.++++..               +...+..
T Consensus       126 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  205 (480)
T PHA03100        126 YLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAG  205 (480)
T ss_pred             HHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCC
Confidence            344556777788888888888888888  88888888888888777766665555332               1223344


Q ss_pred             cCCC------ccHHHHHHhcCc--HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCccc
Q 037410           67 NNEK------NTALHEAVCHGN--VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER  138 (161)
Q Consensus        67 ~~~g------~t~l~~a~~~~~--~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~  138 (161)
                      +..|      .||+|+|+..++  .+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus       206 ~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~  284 (480)
T PHA03100        206 DIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGD  284 (480)
T ss_pred             CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence            5556      899999999999  9999999999988 889999999999999999999999999999999999999999


Q ss_pred             chHHHHH---hHHHHHHHHh
Q 037410          139 QLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus       139 t~l~~~~---~~~~~~~l~~  155 (161)
                      ||+++|.   ...+...|.+
T Consensus       285 tpl~~A~~~~~~~iv~~Ll~  304 (480)
T PHA03100        285 TPLHIAILNNNKEIFKLLLN  304 (480)
T ss_pred             cHHHHHHHhCCHHHHHHHHh
Confidence            9999974   3344444443

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.90  E-value=3.1e-23  Score=133.38  Aligned_cols=129  Identities=10%  Similarity=0.095  Sum_probs=95.5

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCH----HHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHS----DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      ++.+++..+.++.++||.||+.|+.    +++++|.+.|...+.                  ++..|+||||+|+..|+.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~------------------~d~~g~t~Lh~Aa~~g~~   70 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHR------------------YDHHGRQCTHMVAWYDRA   70 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhc------------------cCCCCCcHHHHHHHhCcc
Confidence            3456666777888888888888887    555667777776443                  677888888888887765


Q ss_pred             H---HHHHHHHcCCCCccccC-CCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHHHhH---HHHHHHHh
Q 037410           84 H---VVKILTKQGPDNPYSAN-NYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQQCT---FILLSLTR  155 (161)
Q Consensus        84 ~---~~~~L~~~g~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~~~---~~~~~l~~  155 (161)
                      +   ++++|++.|++ ++.++ ..|.||||+|+..++.+++++|+. .|++++.++..|+||+|++...   .+...|..
T Consensus        71 ~~~~~i~~Ll~~Gad-in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~  149 (166)
T PHA02743         71 NAVMKIELLVNMGAD-INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRA  149 (166)
T ss_pred             CHHHHHHHHHHcCCC-CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            4   47788888877 67776 478888888888888888888884 7888888888888888886442   34444443

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.90  E-value=4.2e-23  Score=156.79  Aligned_cols=140  Identities=15%  Similarity=0.019  Sum_probs=94.1

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCC--HHHHHHHHHhhHhhhcCCCCCCCccchhh------------hhhhhhc--C
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGH--SDIVSVLVQTAKIAQHGDGEPESGIGADR------------QMIRMAN--N   68 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~--~   68 (161)
                      |...+++++.+|..|+||||+|+..|+  .+++++|++.|++++..+..+.+++...-            ..+...+  .
T Consensus       198 LLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~  277 (764)
T PHA02716        198 LCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK  277 (764)
T ss_pred             HHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence            334556666666666777777766663  36666667666666654444433332110            0000000  0


Q ss_pred             CCcc--HHH---HHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHh--CCChHHHHHHHhcCCCCCCCCCcccchH
Q 037410           69 EKNT--ALH---EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK--GRYSEMVIELLETAHQCPMKAPTERQLC  141 (161)
Q Consensus        69 ~g~t--~l~---~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~--~~~~~~~~~Ll~~g~~~~~~~~~~~t~l  141 (161)
                      ...+  +++   .|+..|+.+++++|++.|++ ++.+|..|+||||+|+.  .++.+++++|+++|++++.+|..|+|||
T Consensus       278 ~~~~~~~L~~~i~AA~~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPL  356 (764)
T PHA02716        278 VKNIPMILHSYITLARNIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVL  356 (764)
T ss_pred             cccchhhhHHHHHHHHcCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHH
Confidence            0011  111   24566889999999999998 88999999999999764  5678999999999999999999999999


Q ss_pred             HHHH
Q 037410          142 MLQQ  145 (161)
Q Consensus       142 ~~~~  145 (161)
                      |++.
T Consensus       357 H~A~  360 (764)
T PHA02716        357 HTYL  360 (764)
T ss_pred             HHHH
Confidence            9863

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.90  E-value=5.7e-23  Score=152.05  Aligned_cols=135  Identities=20%  Similarity=0.144  Sum_probs=108.3

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh----------------hhhhhhc
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR----------------QMIRMAN   67 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~   67 (161)
                      +|...+++++.+|..|+||||+|+..|+.+++++|++.|++++..+..+.++++..-                ..++.++
T Consensus       186 ~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~  265 (477)
T PHA02878        186 LLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS  265 (477)
T ss_pred             HHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence            445567889999999999999999999999999999999999998888877765321                1123334


Q ss_pred             C-CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCC-ChHHHHHHHhcC-----CCCCCCCCcccch
Q 037410           68 N-EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR-YSEMVIELLETA-----HQCPMKAPTERQL  140 (161)
Q Consensus        68 ~-~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~-~~~~~~~Ll~~g-----~~~~~~~~~~~t~  140 (161)
                      . .|.||||+|  .++.+++++|++.|++ ++..+..|.|||++|+..+ ..++++.|+.++     .+.+.++..|..+
T Consensus       266 ~~~g~TpLh~A--~~~~~~v~~Ll~~gad-in~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~  342 (477)
T PHA02878        266 YILGLTALHSS--IKSERKLKLLLEYGAD-INSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFID  342 (477)
T ss_pred             CCCCCCHHHHH--ccCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHH
Confidence            3 699999999  5778999999999998 8999999999999999754 467777777654     5677777777655


Q ss_pred             H
Q 037410          141 C  141 (161)
Q Consensus       141 l  141 (161)
                      -
T Consensus       343 n  343 (477)
T PHA02878        343 N  343 (477)
T ss_pred             H
Confidence            3

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.8e-23  Score=139.12  Aligned_cols=121  Identities=25%  Similarity=0.270  Sum_probs=111.5

Q ss_pred             HhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHH
Q 037410            6 ELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHV   85 (161)
Q Consensus         6 ~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~   85 (161)
                      .....+.|.-|..|++|||+||+.|+..+++.|++.|+.++.                  .+....||||+|+.+|+.++
T Consensus        21 d~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~------------------tnmgddtplhlaaahghrdi   82 (448)
T KOG0195|consen   21 DDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNS------------------TNMGDDTPLHLAAAHGHRDI   82 (448)
T ss_pred             cCcccccccccccCcchhhhhhhcccHHHHHHHHhccccccc------------------ccCCCCcchhhhhhcccHHH
Confidence            344557788899999999999999999999999999999776                  56667899999999999999


Q ss_pred             HHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           86 VKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        86 ~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      +..|+++.++ ++..+..|.||||+||.-|+..+++-|+..|+.++..|+.|.||+..+.
T Consensus        83 vqkll~~kad-vnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   83 VQKLLSRKAD-VNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHHHHHHhcc-cchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            9999999998 8999999999999999999999999999999999999999999999853

>PHA03095 ankyrin-like protein; Provisional

Probab=99.90  E-value=1e-22  Score=150.45  Aligned_cols=121  Identities=20%  Similarity=0.211  Sum_probs=94.0

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhC---CHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFG---HSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      |...+++++.++..|.||||+|+..+   +.+++++|++.|++++.                  ++..|.||||+|+..+
T Consensus        33 Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~------------------~~~~g~TpLh~A~~~~   94 (471)
T PHA03095         33 LLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA------------------PERCGFTPLHLYLYNA   94 (471)
T ss_pred             HHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcC
Confidence            34557889999999999999999998   89999999999988665                  5667777777777777


Q ss_pred             -cHHHHHHHHHcCCCCccccCCCCCcHHHHHH--hCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           82 -NVHVVKILTKQGPDNPYSANNYGKTPLYMAA--KGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        82 -~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~--~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                       ..+++++|++.|++ ++.++..|.||||+|+  ..++.+++++|+++|++++..|..|+||+|++
T Consensus        95 ~~~~iv~lLl~~ga~-in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a  159 (471)
T PHA03095         95 TTLDVIKLLIKAGAD-VNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVL  159 (471)
T ss_pred             CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence             47777777777776 6677777777777777  44566777777777777777777777777764

>PHA02798 ankyrin-like protein; Provisional

Probab=99.90  E-value=1.1e-22  Score=150.86  Aligned_cols=143  Identities=17%  Similarity=0.149  Sum_probs=101.1

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhC---CHHHHHHHHHhhHhhhcCCCCCCCccchh------------------hhh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFG---HSDIVSVLVQTAKIAQHGDGEPESGIGAD------------------RQM   62 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~------------------~~~   62 (161)
                      +|...+++++.+|..|+||||+|+..+   +.+++++|+++|++++..+..+.++++..                  +..
T Consensus        94 ~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad  173 (489)
T PHA02798         94 ILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD  173 (489)
T ss_pred             HHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC
Confidence            344566777777777777777777764   56777777777777777666655554321                  011


Q ss_pred             hhhh-cCCCccHHHHHHhc----CcHHHHHHHHHcCCC--------------------------------------Cccc
Q 037410           63 IRMA-NNEKNTALHEAVCH----GNVHVVKILTKQGPD--------------------------------------NPYS   99 (161)
Q Consensus        63 ~~~~-~~~g~t~l~~a~~~----~~~~~~~~L~~~g~~--------------------------------------~~~~   99 (161)
                      ++.. +..|.||+|.++..    ++.+++++|++.|++                                      +++.
T Consensus       174 in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~  253 (489)
T PHA02798        174 INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQ  253 (489)
T ss_pred             cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCC
Confidence            1222 23566777766543    356677777666543                                      1334


Q ss_pred             cCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410          100 ANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus       100 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      +|..|.||||+|+..++.+++++|+++|++++.++..|+||+++|..
T Consensus       254 ~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~  300 (489)
T PHA02798        254 VDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFE  300 (489)
T ss_pred             cCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHH
Confidence            56679999999999999999999999999999999999999999754

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.89  E-value=1.5e-22  Score=130.22  Aligned_cols=116  Identities=19%  Similarity=0.154  Sum_probs=102.8

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHH---HHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhc
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDI---VSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCH   80 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~---v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~   80 (161)
                      +...+..++.+|..|+||||+|+..|+.+.   +++|++.|++++.                  ++ ..|.||||+|+..
T Consensus        43 l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~------------------~d~~~g~TpLh~A~~~  104 (166)
T PHA02743         43 ISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA------------------RELGTGNTLLHIAAST  104 (166)
T ss_pred             HhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC------------------CCCCCCCcHHHHHHHh
Confidence            335667788899999999999999998654   8999999988665                  56 5899999999999


Q ss_pred             CcHHHHHHHHH-cCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccc
Q 037410           81 GNVHVVKILTK-QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQ  139 (161)
Q Consensus        81 ~~~~~~~~L~~-~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t  139 (161)
                      ++.+++++|+. .|++ ++.++..|.||||+|+..++.+++++|+++|++++.++..|.+
T Consensus       105 g~~~iv~~Ll~~~gad-~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743        105 KNYELAEWLCRQLGVN-LGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCHHHHHHHHhccCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence            99999999996 6877 7889999999999999999999999999999999999888754

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.89  E-value=2.9e-22  Score=127.58  Aligned_cols=133  Identities=15%  Similarity=0.163  Sum_probs=102.8

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH---HHH
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV---HVV   86 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~---~~~   86 (161)
                      ...+.+|..|.||||+|++.|+.  ++++...+.....           .......++..|.||||+|+..+..   +++
T Consensus         8 ~~~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~-----------~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v   74 (154)
T PHA02736          8 IFASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDE-----------NRYLVLEYNRHGKQCVHIVSNPDKADPQEKL   74 (154)
T ss_pred             hHHHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcch-----------hHHHHHHhcCCCCEEEEeecccCchhHHHHH
Confidence            34566788999999999999983  3444433322110           1122445688999999999999876   578


Q ss_pred             HHHHHcCCCCccccC-CCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410           87 KILTKQGPDNPYSAN-NYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQQC---TFILLSLTRY  156 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~  156 (161)
                      ++|++.|++ ++.++ ..|.||||+|+..++.+++++|+. .|++++.+|..|+||+|++..   ..+...|..+
T Consensus        75 ~~Ll~~gad-in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~  148 (154)
T PHA02736         75 KLLMEWGAD-INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAK  148 (154)
T ss_pred             HHHHHcCCC-ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            899999998 78887 489999999999999999999998 499999999999999999764   3445545443

>PHA03095 ankyrin-like protein; Provisional

Probab=99.89  E-value=2.2e-22  Score=148.71  Aligned_cols=142  Identities=18%  Similarity=0.102  Sum_probs=102.3

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHH--HhCCHHHHHHHHHhhHhhhcCCCCCCCccch----------------------
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAA--KFGHSDIVSVLVQTAKIAQHGDGEPESGIGA----------------------   58 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~----------------------   58 (161)
                      ++|...+++++.+|..|+||||+|+  ..++.+++++|++.|++++..+..+.++++.                      
T Consensus       101 ~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~  180 (471)
T PHA03095        101 KLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADV  180 (471)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC
Confidence            3444556666677777777777776  3445666777776666665544444333211                      


Q ss_pred             -------------h-----------------hhhhhhhcCCCccHHHHHHhcCcH--HHHHHHHHcCCCCccccCCCCCc
Q 037410           59 -------------D-----------------RQMIRMANNEKNTALHEAVCHGNV--HVVKILTKQGPDNPYSANNYGKT  106 (161)
Q Consensus        59 -------------~-----------------~~~~~~~~~~g~t~l~~a~~~~~~--~~~~~L~~~g~~~~~~~~~~~~t  106 (161)
                                   .                 +...+.++..|.||||+|+..+..  .+++.|+..|.+ ++.+|..|.|
T Consensus       181 ~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~T  259 (471)
T PHA03095        181 YAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQT  259 (471)
T ss_pred             cccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCC
Confidence                         0                 112344566777888887777753  567778888887 7888999999


Q ss_pred             HHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410          107 PLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus       107 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      |||+|+..|+.+++++|+++|++++.++..|+||+++|.
T Consensus       260 pLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~  298 (471)
T PHA03095        260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMV  298 (471)
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999864

>PHA02946 ankyin-like protein; Provisional

Probab=99.89  E-value=4.6e-22  Score=145.60  Aligned_cols=142  Identities=15%  Similarity=0.128  Sum_probs=117.3

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCC--HHHHHHHHHhhHhhhc-CCCCCCCccch--------------hhhhhhh
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGH--SDIVSVLVQTAKIAQH-GDGEPESGIGA--------------DRQMIRM   65 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~--~~~v~~Ll~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~   65 (161)
                      ++|...+++++.+|..|+||||+|+..++  .+++++|+++|++++. .+..+..++..              .....+.
T Consensus        89 ~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~  168 (446)
T PHA02946         89 AMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARI  168 (446)
T ss_pred             HHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccc
Confidence            34556789999999999999999988764  7899999999999885 35555544432              1233566


Q ss_pred             hcCCCccHHHHHHhcC--cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCC--ChHHHHHHHhcCCCCCCCCCcccchH
Q 037410           66 ANNEKNTALHEAVCHG--NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR--YSEMVIELLETAHQCPMKAPTERQLC  141 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~--~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~~~t~l  141 (161)
                      ++..|.||||+|+..+  ..+++++|++.|++ ++.+|..|.||||+|+..+  +.+++++|++ |++++.+|..|+|||
T Consensus       169 ~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gad-in~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpL  246 (446)
T PHA02946        169 VDKFGKNHIHRHLMSDNPKASTISWMMKLGIS-PSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPL  246 (446)
T ss_pred             cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence            7889999999987654  46899999999998 8899999999999999976  7889999885 899999999999999


Q ss_pred             HHHHh
Q 037410          142 MLQQC  146 (161)
Q Consensus       142 ~~~~~  146 (161)
                      |++..
T Consensus       247 h~A~~  251 (446)
T PHA02946        247 TLLIK  251 (446)
T ss_pred             HHHHH
Confidence            99654

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.89  E-value=3.4e-22  Score=153.47  Aligned_cols=123  Identities=22%  Similarity=0.189  Sum_probs=94.4

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc-
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN-   82 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~-   82 (161)
                      +|...+++++.+|..|.||||+|+..|+.+++++|++.|++++                  ..+..|.||||+|+..++ 
T Consensus       360 lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~------------------~~~~~g~T~Lh~A~~~~~~  421 (682)
T PHA02876        360 TLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE------------------ALSQKIGTALHFALCGTNP  421 (682)
T ss_pred             HHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc------------------ccCCCCCchHHHHHHcCCH
Confidence            3445556666666666666666666666666666666666544                  367788899999887655 


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCC-ChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR-YSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      ..++++|++.|++ ++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|+||++++.
T Consensus       422 ~~~vk~Ll~~gad-in~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~  484 (682)
T PHA02876        422 YMSVKTLIDRGAN-VNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIAL  484 (682)
T ss_pred             HHHHHHHHhCCCC-CCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            5678889999988 8889999999999999866 679999999999999999999999998853

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.89  E-value=3.2e-22  Score=152.10  Aligned_cols=135  Identities=21%  Similarity=0.168  Sum_probs=112.4

Q ss_pred             hhHHHhCCcccccc-CCCCCcHHHHHHH--hCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHH
Q 037410            2 EEILELCPSLLLNV-NAKGDTPLRVAAK--FGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV   78 (161)
Q Consensus         2 ~~ll~~~~~~~~~~-~~~g~t~lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~   78 (161)
                      +.|++..+++++.+ |..|.||||+|+.  +++.+++++|++.|++++.                  ++..|.||||+|+
T Consensus       159 k~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~------------------kD~~G~TPLH~Aa  220 (764)
T PHA02716        159 KYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNL------------------QNNHLITPLHTYL  220 (764)
T ss_pred             HHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHH
Confidence            34454433888888 8999999999864  4678999999999998665                  7889999999999


Q ss_pred             hcCc--HHHHHHHHHcCCCCccccCCCCCcHHHHH-------------------------------------HhCCChHH
Q 037410           79 CHGN--VHVVKILTKQGPDNPYSANNYGKTPLYMA-------------------------------------AKGRYSEM  119 (161)
Q Consensus        79 ~~~~--~~~~~~L~~~g~~~~~~~~~~~~t~l~~A-------------------------------------~~~~~~~~  119 (161)
                      ..|+  .+++++|++.|++ ++.++..|.||||.|                                     ++.|+.++
T Consensus       221 ~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~lei  299 (764)
T PHA02716        221 ITGNVCASVIKKIIELGGD-MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISV  299 (764)
T ss_pred             HcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHH
Confidence            9985  5899999999998 899999999999965                                     34577889


Q ss_pred             HHHHHhcCCCCCCCCCcccchHHHHH-----hHHHHHHHHh
Q 037410          120 VIELLETAHQCPMKAPTERQLCMLQQ-----CTFILLSLTR  155 (161)
Q Consensus       120 ~~~Ll~~g~~~~~~~~~~~t~l~~~~-----~~~~~~~l~~  155 (161)
                      +++|+++|++++.+|..|+||||++.     ...+.+.|..
T Consensus       300 VklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe  340 (764)
T PHA02716        300 VYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHE  340 (764)
T ss_pred             HHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHH
Confidence            99999999999999999999999853     2345555544

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.89  E-value=7.3e-22  Score=151.66  Aligned_cols=153  Identities=18%  Similarity=0.107  Sum_probs=120.0

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhC-CHHHHHHHHHhhHhhhcCCCCCCCccchh----------------hhhhhh
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFG-HSDIVSVLVQTAKIAQHGDGEPESGIGAD----------------RQMIRM   65 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~----------------~~~~~~   65 (161)
                      ++|...+++++.+|..|.||||+|+..| ..++++.|+..|++++..+..+.++++..                +..++.
T Consensus       291 ~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~  370 (682)
T PHA02876        291 PKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNA  370 (682)
T ss_pred             HHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCcc
Confidence            3455667777888888888888888888 47888888888888777776666555432                123566


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC-hHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY-SEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~-~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      ++..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..+. ..++++|+++|++++.+|..|+||||+|
T Consensus       371 ~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~A  449 (682)
T PHA02876        371 RDYCDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYA  449 (682)
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHH
Confidence            788899999999999999999999999988 77888899999999987655 5678999999999999999999999997


Q ss_pred             Hh----HHHHHHHHhh
Q 037410          145 QC----TFILLSLTRY  156 (161)
Q Consensus       145 ~~----~~~~~~l~~~  156 (161)
                      ..    ..+.+.|..+
T Consensus       450 a~~~~~~~iv~lLl~~  465 (682)
T PHA02876        450 CKKNCKLDVIEMLLDN  465 (682)
T ss_pred             HHhCCcHHHHHHHHHC
Confidence            53    3456666554

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.88  E-value=4e-22  Score=147.66  Aligned_cols=152  Identities=24%  Similarity=0.151  Sum_probs=126.0

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHH--HhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-----------------hhhh
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAA--KFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD-----------------RQMI   63 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~-----------------~~~~   63 (161)
                      ++|...++.++..|..|.||||+|+  ..|+.+++++|++.|++++..+..+..+++..                 +..+
T Consensus        90 ~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di  169 (480)
T PHA03100         90 KLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI  169 (480)
T ss_pred             HHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc
Confidence            3455667888999999999999999  99999999999999999888777766655321                 1224


Q ss_pred             hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCC------CcHHHHHHhCCC--hHHHHHHHhcCCCCCCCCC
Q 037410           64 RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYG------KTPLYMAAKGRY--SEMVIELLETAHQCPMKAP  135 (161)
Q Consensus        64 ~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~------~t~l~~A~~~~~--~~~~~~Ll~~g~~~~~~~~  135 (161)
                      +..+..|.||||+|+..|+.+++++|++.|++ ++..+..+      .||||.|+..++  .+++++|+++|++++.+|.
T Consensus       170 n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~  248 (480)
T PHA03100        170 NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGAD-INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDV  248 (480)
T ss_pred             ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCC-ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCC
Confidence            55677899999999999999999999999988 67777777      899999999999  9999999999999999999


Q ss_pred             cccchHHHHHh---HHHHHHHHh
Q 037410          136 TERQLCMLQQC---TFILLSLTR  155 (161)
Q Consensus       136 ~~~t~l~~~~~---~~~~~~l~~  155 (161)
                      .|+||+|+|..   ..+.+.|..
T Consensus       249 ~g~TpL~~A~~~~~~~iv~~Ll~  271 (480)
T PHA03100        249 YGFTPLHYAVYNNNPEFVKYLLD  271 (480)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHH
Confidence            99999998654   445555544

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.88  E-value=5.5e-22  Score=147.34  Aligned_cols=144  Identities=13%  Similarity=0.041  Sum_probs=113.9

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhh-hcCCCCCCCccchh-----------------hh
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIA-QHGDGEPESGIGAD-----------------RQ   61 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~-~~~~~~~~~~~~~~-----------------~~   61 (161)
                      ++|...+++++.+|..|+||||.|+..   |+.+++++|+++|+++ +..+..+.++++..                 +.
T Consensus        92 ~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Ga  171 (494)
T PHA02989         92 KLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGV  171 (494)
T ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCC
Confidence            345567888999999999999988765   5789999999999998 67777776666431                 01


Q ss_pred             hhhh-hcCCCccHHHHHHhc----CcHHHHHHHHHcCCCC-------------------------------------ccc
Q 037410           62 MIRM-ANNEKNTALHEAVCH----GNVHVVKILTKQGPDN-------------------------------------PYS   99 (161)
Q Consensus        62 ~~~~-~~~~g~t~l~~a~~~----~~~~~~~~L~~~g~~~-------------------------------------~~~   99 (161)
                      .++. .+..|.||+|+|+..    ++.+++++|++.|++.                                     ++.
T Consensus       172 di~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~  251 (494)
T PHA02989        172 NLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINK  251 (494)
T ss_pred             CccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCC
Confidence            1222 456788999988765    4788999999888751                                     234


Q ss_pred             cCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410          100 ANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus       100 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      +|..|.||||+|+..++.+++++|+++|++++.+|..|+||+|+|..
T Consensus       252 ~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~  298 (494)
T PHA02989        252 KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIK  298 (494)
T ss_pred             CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            55679999999999999999999999999999999999999999643

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.88  E-value=1.1e-22  Score=151.34  Aligned_cols=136  Identities=23%  Similarity=0.235  Sum_probs=105.9

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-----------------hhhhhhhcCCC
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD-----------------RQMIRMANNEK   70 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~g   70 (161)
                      ....++..|.+|.||||+||+.|+.++++.|+..|++++......+++++..                 ..+.+..|-.|
T Consensus       262 ~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g  341 (929)
T KOG0510|consen  262 EKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHG  341 (929)
T ss_pred             HHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccC
Confidence            3456788899999999999999999999999999999988776666666432                 12234556677


Q ss_pred             ccHHHHHHhcCcHHHHHHHHHcCCCCcc--ccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           71 NTALHEAVCHGNVHVVKILTKQGPDNPY--SANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        71 ~t~l~~a~~~~~~~~~~~L~~~g~~~~~--~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      .||||.|+..|+..+++.|+..|+...+  ..|.+|.||||.|++.|+..+++.|+.+|+++..+|..|.+++++
T Consensus       342 ~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  342 MTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             CCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            7888888888888888888888876443  337778888888888888888888888888888888888887775

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.88  E-value=7.9e-22  Score=136.34  Aligned_cols=118  Identities=19%  Similarity=0.150  Sum_probs=101.0

Q ss_pred             cccCCCCCc-HHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH
Q 037410           13 LNVNAKGDT-PLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK   91 (161)
Q Consensus        13 ~~~~~~g~t-~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~   91 (161)
                      -.+|..|+| +||.|+..|+.+++++|+++|++++..+              ...+..|.||||+|+..++.+++++|++
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~--------------~~sd~~g~TpLh~Aa~~~~~eivklLL~   91 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPF--------------PLSENSKTNPLIYAIDCDNDDAAKLLIR   91 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccC--------------cccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            346777776 5666677789999999999999876521              0024689999999999999999999999


Q ss_pred             cCCCCcccc-CCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           92 QGPDNPYSA-NNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        92 ~g~~~~~~~-~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      .|++ ++.+ +..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|.
T Consensus        92 ~GAD-VN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~  145 (300)
T PHA02884         92 YGAD-VNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL  145 (300)
T ss_pred             cCCC-cCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            9998 7775 567999999999999999999999999999999999999999874

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.88  E-value=1.2e-21  Score=152.79  Aligned_cols=141  Identities=22%  Similarity=0.164  Sum_probs=112.2

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------hhh----hhhcCCCc
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------QMI----RMANNEKN   71 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~----~~~~~~g~   71 (161)
                      +.+.+.+++..|..|.||||+||..|+.+++++|+++|++++..+..+.++++..-         .++    ......+.
T Consensus       544 Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~  623 (823)
T PLN03192        544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAG  623 (823)
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCc
Confidence            33567889999999999999999999999999999999998887777766654321         000    01123466


Q ss_pred             cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcc-cchHHHHHh
Q 037410           72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTE-RQLCMLQQC  146 (161)
Q Consensus        72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~t~l~~~~~  146 (161)
                      ++||.|+..|+.++++.|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++..|..| .||..++..
T Consensus       624 ~~L~~Aa~~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        624 DLLCTAAKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             hHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            788888888888888888888887 77888888888888888888888888888888888888888 888876533

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.88  E-value=2.4e-22  Score=142.03  Aligned_cols=119  Identities=25%  Similarity=0.328  Sum_probs=72.4

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      +|-+||.-|+..|+.++|+.|+.+|+++|.                  ......|||.-||..|+.+++++|++.|++ +
T Consensus        83 egappLWaAsaAGHl~vVk~L~~~ga~VN~------------------tT~TNStPLraACfDG~leivKyLvE~gad-~  143 (615)
T KOG0508|consen   83 EGAPPLWAASAAGHLEVVKLLLRRGASVND------------------TTRTNSTPLRAACFDGHLEIVKYLVEHGAD-P  143 (615)
T ss_pred             CCCchhhHHhccCcHHHHHHHHHhcCcccc------------------ccccCCccHHHHHhcchhHHHHHHHHcCCC-C
Confidence            466666666666666666666666665444                  334445666666666666666666666665 5


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      +..+++|.|+|++|+..|+.+++++|++.|++++.++..|+|+||.++   ...+..+|.+
T Consensus       144 ~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~  204 (615)
T KOG0508|consen  144 EIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLK  204 (615)
T ss_pred             cccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHh
Confidence            566666666666666666666666666666666666666666666543   4444444444

>PHA02795 ankyrin-like protein; Provisional

Probab=99.88  E-value=1.2e-21  Score=140.71  Aligned_cols=78  Identities=17%  Similarity=0.013  Sum_probs=73.3

Q ss_pred             CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410           68 NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus        68 ~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      ..+.+++|.|+..++.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|..
T Consensus       186 ~~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~  263 (437)
T PHA02795        186 IIQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVD  263 (437)
T ss_pred             hhccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            3467899999999999999999999998 89999999999999999999999999999999999999999999999754

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.88  E-value=7.4e-22  Score=146.99  Aligned_cols=145  Identities=25%  Similarity=0.206  Sum_probs=103.0

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh--------------------hhhh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD--------------------RQMI   63 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~--------------------~~~~   63 (161)
                      +|...++++|..|+.|.||||.||.+++.|..+.|++.|+++...+..+-..++..                    ...+
T Consensus       139 ~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~i  218 (929)
T KOG0510|consen  139 LLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHI  218 (929)
T ss_pred             HHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhccc
Confidence            34455699999999999999999999999988999999998887776665554321                    2334


Q ss_pred             hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCC--------------ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           64 RMANNEKNTALHEAVCHGNVHVVKILTKQGPDN--------------PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        64 ~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~--------------~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      +..+..+.+|||.|+..|++++++.+++.|...              .+..|++|.||||+|++.|+.+++..|+..|++
T Consensus       219 n~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~  298 (929)
T KOG0510|consen  219 NFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS  298 (929)
T ss_pred             ccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc
Confidence            555666777777777777777777777665431              123456677777777777777777777777777


Q ss_pred             CCCCCCcccchHHHHHhHH
Q 037410          130 CPMKAPTERQLCMLQQCTF  148 (161)
Q Consensus       130 ~~~~~~~~~t~l~~~~~~~  148 (161)
                      ++.++.++.||+|.|....
T Consensus       299 I~~kn~d~~spLH~AA~yg  317 (929)
T KOG0510|consen  299 INSKNKDEESPLHFAAIYG  317 (929)
T ss_pred             ccccCCCCCCchHHHHHcc
Confidence            7777777777777765543

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.88  E-value=2e-22  Score=142.41  Aligned_cols=124  Identities=26%  Similarity=0.279  Sum_probs=112.0

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      +|...++.+|..+..+.|||..||.-|+.+++++|+++|++++.                  .|+.|.|.||+||..|+.
T Consensus       102 ~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~I------------------anrhGhTcLmIa~ykGh~  163 (615)
T KOG0508|consen  102 LLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEI------------------ANRHGHTCLMIACYKGHV  163 (615)
T ss_pred             HHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcc------------------cccCCCeeEEeeeccCch
Confidence            34444599999999999999999999999999999999999664                  899999999999999999


Q ss_pred             HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410           84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus        84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      +++++|++.|++ ++.++..|+|+||-+++.|+.+++++|+.+|+.+..- ..|.|||-.|.-.
T Consensus       164 ~I~qyLle~gAD-vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d-~~GmtPL~~Aa~t  225 (615)
T KOG0508|consen  164 DIAQYLLEQGAD-VNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVD-GHGMTPLLLAAVT  225 (615)
T ss_pred             HHHHHHHHhCCC-cchhcccCchHHHhhhhcccHHHHHHHHhCCceeeec-CCCCchHHHHhhh
Confidence            999999999999 8999999999999999999999999999999877654 4499999875433

>PHA02798 ankyrin-like protein; Provisional

Probab=99.87  E-value=2.1e-21  Score=144.07  Aligned_cols=123  Identities=17%  Similarity=0.176  Sum_probs=107.6

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHh-----CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHH
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKF-----GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA   77 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~-----g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a   77 (161)
                      ++|...+++++.+|..|.||||.|+..     ++.+++++|+++|++++.                  ++..|.||||+|
T Consensus        55 ~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~------------------~d~~G~TpLh~a  116 (489)
T PHA02798         55 KLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINK------------------KNSDGETPLYCL  116 (489)
T ss_pred             HHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCC------------------CCCCcCcHHHHH
Confidence            455567889999999999999998764     668999999999998665                  788999999999


Q ss_pred             HhcC---cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC---hHHHHHHHhcCCCCCCCC-CcccchHHHH
Q 037410           78 VCHG---NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY---SEMVIELLETAHQCPMKA-PTERQLCMLQ  144 (161)
Q Consensus        78 ~~~~---~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~---~~~~~~Ll~~g~~~~~~~-~~~~t~l~~~  144 (161)
                      +..+   +.+++++|++.|++ ++.++..|.||||+|++.++   .+++++|+++|++++..+ ..|.||+|.+
T Consensus       117 ~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~  189 (489)
T PHA02798        117 LSNGYINNLEILLFMIENGAD-TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCY  189 (489)
T ss_pred             HHcCCcChHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHH
Confidence            9875   68999999999998 88999999999999999887   899999999999999885 5789999874

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.87  E-value=2.9e-21  Score=112.06  Aligned_cols=89  Identities=35%  Similarity=0.450  Sum_probs=79.8

Q ss_pred             HHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCC
Q 037410           23 LRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN  102 (161)
Q Consensus        23 lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~  102 (161)
                      ||+||+.|+.+++++|++.+.+.                     +. |.||+|+|+..|+.+++++|++.|++ ++.++.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~---------------------~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~   57 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADI---------------------NL-GNTALHYAAENGNLEIVKLLLENGAD-INSQDK   57 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTT---------------------TS-SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BST
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCC---------------------CC-CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCC
Confidence            79999999999999999977552                     22 88999999999999999999999998 888999


Q ss_pred             CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCC
Q 037410          103 YGKTPLYMAAKGRYSEMVIELLETAHQCPMKA  134 (161)
Q Consensus       103 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~  134 (161)
                      .|.||||+|+.+++.+++++|+++|++++.+|
T Consensus        58 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   58 NGNTALHYAAENGNLEIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             TSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence            99999999999999999999999999998875

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02730 ankyrin-like protein; Provisional

Probab=99.86  E-value=5.7e-21  Score=143.12  Aligned_cols=137  Identities=17%  Similarity=0.108  Sum_probs=111.9

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCC----HHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHH-
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGH----SDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHE-   76 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~-   76 (161)
                      -++|...+++++.. ..|+||||+|+..++    .+++++|+++|+..+                ++.++..|.||||. 
T Consensus       362 velLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~d----------------IN~kd~~G~T~Lh~~  424 (672)
T PHA02730        362 LRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMA----------------INHVSNNGRLCMYGL  424 (672)
T ss_pred             HHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcc----------------ccccccCCCchHhHH
Confidence            35667788999975 789999999999885    899999999987311                22367889999984 


Q ss_pred             --HHhcC---------cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC-cccchHHHH
Q 037410           77 --AVCHG---------NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP-TERQLCMLQ  144 (161)
Q Consensus        77 --a~~~~---------~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~l~~~  144 (161)
                        |...+         ..+++++|+..|++ ++.+|..|.||||+|+..++.+++++|+++|++++.++. .|+||++.+
T Consensus       425 i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD-INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~A  503 (672)
T PHA02730        425 ILSRFNNCGYHCYETILIDVFDILSKYMDD-IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKS  503 (672)
T ss_pred             HHHHhccccccccchhHHHHHHHHHhcccc-hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHH
Confidence              33222         23579999999998 899999999999999999999999999999999999997 599999997


Q ss_pred             Hh-----HHHHHHHHhh
Q 037410          145 QC-----TFILLSLTRY  156 (161)
Q Consensus       145 ~~-----~~~~~~l~~~  156 (161)
                      ..     ..+++.|..+
T Consensus       504 a~~~~~~~eIv~~LLs~  520 (672)
T PHA02730        504 SYRRENKTKLVDLLLSY  520 (672)
T ss_pred             HHhhcCcHHHHHHHHHc
Confidence            53     4466666544

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.85  E-value=3.2e-21  Score=149.98  Aligned_cols=141  Identities=23%  Similarity=0.263  Sum_probs=119.0

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch---------------hhhhhhhhcC
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA---------------DRQMIRMANN   68 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~   68 (161)
                      ++...+...+.....|+||||.|+..|+.+++..+++.+...+.........++.               .+...+.++.
T Consensus       459 ~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~  538 (1143)
T KOG4177|consen  459 LLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTG  538 (1143)
T ss_pred             hHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcc
Confidence            4556778888888999999999999999999998888775544443333333322               1344567788


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      ++.||||.|+..|+..+|++|+++|++ .+.++..|+||||.|+..|+.+|+++|+++|+++|..+.+|.||++.+.
T Consensus       539 r~~TpLh~A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~  614 (1143)
T KOG4177|consen  539 RGYTPLHVAVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAV  614 (1143)
T ss_pred             cccchHHHHHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHH
Confidence            899999999999999999999999999 8899999999999999999999999999999999999999999999853

>PHA02917 ankyrin-like protein; Provisional

Probab=99.85  E-value=2.2e-20  Score=141.96  Aligned_cols=142  Identities=11%  Similarity=0.069  Sum_probs=110.7

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhh-------------hhhh
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQ-------------MIRM   65 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~-------------~~~~   65 (161)
                      ++++. .+..++.+|.+|.||||+|+..   |+.+++++|++.|++++..+..+.+++...-.             ++..
T Consensus        16 ~~l~~-~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~   94 (661)
T PHA02917         16 KQMLR-DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEA   94 (661)
T ss_pred             HHHHh-ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhc
Confidence            55664 5667788899999999998665   78999999999999999887777777653211             1111


Q ss_pred             ---hcCC-CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHH--HhCCChHHHHHHHhcCCCCCCCCCc---
Q 037410           66 ---ANNE-KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA--AKGRYSEMVIELLETAHQCPMKAPT---  136 (161)
Q Consensus        66 ---~~~~-g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~---  136 (161)
                         .+.. ..+++++|+..++.+++++|++.|++ ++.+|..|.|||+.+  +..++.+++++|+++|++++.+|..   
T Consensus        95 ~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~  173 (661)
T PHA02917         95 TGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEY  173 (661)
T ss_pred             cCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccc
Confidence               1222 22566778888999999999999998 899999999999954  4578999999999999999876543   


Q ss_pred             c-----------cchHHHHH
Q 037410          137 E-----------RQLCMLQQ  145 (161)
Q Consensus       137 ~-----------~t~l~~~~  145 (161)
                      |           .||||++.
T Consensus       174 g~~~~~~~~~~~~t~L~~a~  193 (661)
T PHA02917        174 GYAYDDYQPRNCGTVLHLYI  193 (661)
T ss_pred             ccccccccccccccHHHHHH
Confidence            3           59999974

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.85  E-value=1.4e-21  Score=134.22  Aligned_cols=147  Identities=22%  Similarity=0.228  Sum_probs=120.7

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccch----------h----h-----hhhhhh-cC
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGA----------D----R-----QMIRMA-NN   68 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~----------~----~-----~~~~~~-~~   68 (161)
                      ..+|+-|.+|+|+|||++.++++++|+.||+.|. +++.++..+-..+-.          .    .     -+++.+ ..
T Consensus       259 yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ  338 (452)
T KOG0514|consen  259 YVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQ  338 (452)
T ss_pred             HHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhh
Confidence            4588999999999999999999999999998764 455555444433311          0    0     112333 35


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhc-CCCCCCCCCcccchHHH---H
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET-AHQCPMKAPTERQLCML---Q  144 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~---~  144 (161)
                      .|.|+|++|+.+|+.++++.|+.-|++ +|.+|.+|.|+|+.|+.+||.+++++|+.. ++++...|.+|.|+|.+   +
T Consensus       339 ~gQTALMLAVSHGr~d~vk~LLacgAd-VNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  339 HGQTALMLAVSHGRVDMVKALLACGAD-VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA  417 (452)
T ss_pred             hcchhhhhhhhcCcHHHHHHHHHccCC-CccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence            699999999999999999999999999 899999999999999999999999999986 69999999999999998   5


Q ss_pred             HhHHHHHHHHhhh
Q 037410          145 QCTFILLSLTRYS  157 (161)
Q Consensus       145 ~~~~~~~~l~~~~  157 (161)
                      +...+..+|.-+.
T Consensus       418 gh~eIa~mlYa~~  430 (452)
T KOG0514|consen  418 GHREIAVMLYAHM  430 (452)
T ss_pred             CchHHHHHHHHHH
Confidence            7777777776553

>PHA02917 ankyrin-like protein; Provisional

Probab=99.84  E-value=3.2e-20  Score=141.02  Aligned_cols=150  Identities=13%  Similarity=0.042  Sum_probs=110.2

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHH----HHHHHHHhhHhhhcCCCCCC------Cc-------cchhhhhhhhh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSD----IVSVLVQTAKIAQHGDGEPE------SG-------IGADRQMIRMA   66 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~   66 (161)
                      +|...+++++.+|..|+||||+|+..|+.+    +++.|++.+...+..+....      ..       +...+..++.+
T Consensus        53 ~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~  132 (661)
T PHA02917         53 LLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVK  132 (661)
T ss_pred             HHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCcc
Confidence            444678899999999999999999999854    56777766443333221100      00       01123446678


Q ss_pred             cCCCccHHHHH--HhcCcHHHHHHHHHcCCCCccccCC---CC-----------CcHHHHHHh-----------CCChHH
Q 037410           67 NNEKNTALHEA--VCHGNVHVVKILTKQGPDNPYSANN---YG-----------KTPLYMAAK-----------GRYSEM  119 (161)
Q Consensus        67 ~~~g~t~l~~a--~~~~~~~~~~~L~~~g~~~~~~~~~---~~-----------~t~l~~A~~-----------~~~~~~  119 (161)
                      +..|.||||.+  +..|+.+++++|++.|++ ++..+.   .|           .||||+|+.           +++.++
T Consensus       133 d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~ei  211 (661)
T PHA02917        133 CENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEV  211 (661)
T ss_pred             CCCCccHHHHHHHccCCCHHHHHHHHHcCCC-ccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHH
Confidence            88999999954  357899999999999998 554432   33           599999976           468899


Q ss_pred             HHHHHhcCCCCCCCCCcccchHHHHHhH-----HHHHHHH
Q 037410          120 VIELLETAHQCPMKAPTERQLCMLQQCT-----FILLSLT  154 (161)
Q Consensus       120 ~~~Ll~~g~~~~~~~~~~~t~l~~~~~~-----~~~~~l~  154 (161)
                      +++|+++|++++.+|..|+||||++...     .+.+.|.
T Consensus       212 v~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li  251 (661)
T PHA02917        212 VKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLM  251 (661)
T ss_pred             HHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHH
Confidence            9999999999999999999999996532     3555554

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.84  E-value=9.1e-21  Score=135.52  Aligned_cols=146  Identities=21%  Similarity=0.150  Sum_probs=122.6

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-----------------------
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD-----------------------   59 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~-----------------------   59 (161)
                      .++...++.+|..|..||||+|-|+..|+..++.+|+++|++.......+..+....                       
T Consensus        90 ~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~  169 (527)
T KOG0505|consen   90 KFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAA  169 (527)
T ss_pred             HHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHH
Confidence            455677899999999999999999999999999999999997766554443333110                       


Q ss_pred             ------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHH
Q 037410           60 ------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVI  121 (161)
Q Consensus        60 ------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~  121 (161)
                                        ....+.....|.|.+|+|+..|+.++.++|+..|.+ ++.+|.+|+||||.|+.=|..++++
T Consensus       170 R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgWtPlHAAA~Wg~~~~~e  248 (527)
T KOG0505|consen  170 RKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGWTPLHAAAHWGQEDACE  248 (527)
T ss_pred             hhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccC-cccccccCCCcccHHHHhhhHhHHH
Confidence                              122344455589999999999999999999999998 8899999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCcccchHHHHHhHHH
Q 037410          122 ELLETAHQCPMKAPTERQLCMLQQCTFI  149 (161)
Q Consensus       122 ~Ll~~g~~~~~~~~~~~t~l~~~~~~~~  149 (161)
                      +|+++|++++..+..|++|+.++....+
T Consensus       249 lL~~~ga~~d~~t~~g~~p~dv~dee~~  276 (527)
T KOG0505|consen  249 LLVEHGADMDAKTKMGETPLDVADEEEL  276 (527)
T ss_pred             HHHHhhcccchhhhcCCCCccchhhhhH
Confidence            9999999999999999999998655443

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.84  E-value=9.7e-20  Score=126.04  Aligned_cols=118  Identities=16%  Similarity=0.091  Sum_probs=97.8

Q ss_pred             hHHHhCCccccccC----CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhh-cCCCccHHHHH
Q 037410            3 EILELCPSLLLNVN----AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMA-NNEKNTALHEA   77 (161)
Q Consensus         3 ~ll~~~~~~~~~~~----~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~t~l~~a   77 (161)
                      ++|...+++++.++    ..|.||||+|+..++.+++++|+++|++++.                  + +..|.||||+|
T Consensus        50 k~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------------------~~~~~g~TpLh~A  111 (300)
T PHA02884         50 DAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------------------YAEEAKITPLYIS  111 (300)
T ss_pred             HHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------------------ccCCCCCCHHHHH
Confidence            34556678888874    5899999999999999999999999998764                  3 45799999999


Q ss_pred             HhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           78 VCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        78 ~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      +..++.+++++|+..|++ ++.++..|.||||+|++.++.+++.++.  |..   .+..+.+|.++.
T Consensus       112 a~~~~~eivklLL~~GAd-in~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~  172 (300)
T PHA02884        112 VLHGCLKCLEILLSYGAD-INIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL  172 (300)
T ss_pred             HHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh
Confidence            999999999999999998 8899999999999999998888876664  322   344455666543

>PHA02741 hypothetical protein; Provisional

Probab=99.83  E-value=5.3e-20  Score=118.83  Aligned_cols=103  Identities=22%  Similarity=0.226  Sum_probs=91.8

Q ss_pred             CccccccCCCCCcHHHHHHHhCC----HHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhcCcH
Q 037410            9 PSLLLNVNAKGDTPLRVAAKFGH----SDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCHGNV   83 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~   83 (161)
                      ++.++.+|..|+||||+|+..|+    .+++++|++.|++++.                  ++ ..|.||||+|+..++.
T Consensus        50 ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~------------------~~~~~g~TpLh~A~~~~~~  111 (169)
T PHA02741         50 AAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA------------------QEMLEGDTALHLAAHRRDH  111 (169)
T ss_pred             hhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC------------------CCcCCCCCHHHHHHHcCCH
Confidence            46788999999999999999998    5889999999988654                  56 4899999999999999


Q ss_pred             HHHHHHHHc-CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCC
Q 037410           84 HVVKILTKQ-GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC  130 (161)
Q Consensus        84 ~~~~~L~~~-g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~  130 (161)
                      +++++|+.. +++ ++.++..|.|||++|...++.+++++|++.++..
T Consensus       112 ~iv~~Ll~~~g~~-~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741        112 DLAEWLCCQPGID-LHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             HHHHHHHhCCCCC-CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            999999974 776 8889999999999999999999999999987543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.83  E-value=1.2e-20  Score=120.09  Aligned_cols=102  Identities=25%  Similarity=0.272  Sum_probs=90.4

Q ss_pred             cccccCCCCCcHHHHHHHhCCH---HHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhcCcHHHH
Q 037410           11 LLLNVNAKGDTPLRVAAKFGHS---DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~~g~~---~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~   86 (161)
                      .++.+|.+|+||||+|+..|+.   +++++|++.|.+++.                  ++ ..|.||||+|+..++.+++
T Consensus        47 ~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~------------------~~~~~g~T~Lh~A~~~~~~~i~  108 (154)
T PHA02736         47 LVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADING------------------KERVFGNTPLHIAVYTQNYELA  108 (154)
T ss_pred             HHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccc------------------cCCCCCCcHHHHHHHhCCHHHH
Confidence            3456788999999999999986   468899999988654                  56 5899999999999999999


Q ss_pred             HHHHHc-CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCC
Q 037410           87 KILTKQ-GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCP  131 (161)
Q Consensus        87 ~~L~~~-g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~  131 (161)
                      ++|+.. |.+ ++.++..|.||||+|+..++.+++++|+++|++++
T Consensus       109 ~~Ll~~~g~d-~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        109 TWLCNQPGVN-MEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             HHHHhCCCCC-CccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            999985 766 88899999999999999999999999999998765

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.83  E-value=1.1e-19  Score=141.92  Aligned_cols=122  Identities=18%  Similarity=0.165  Sum_probs=90.8

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP   94 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~   94 (161)
                      .+..+.++||.||..|+.++++.|++.|.+++.                  .|..|.||||+|+..|+.+++++|++.|+
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~------------------~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga  582 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDI------------------GDSKGRTPLHIAASKGYEDCVLVLLKHAC  582 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcChHHHHHHHHhcCC
Confidence            445678999999999999999999999998776                  45556666666666666666666666665


Q ss_pred             CCccccCCCCCcHHH-------------------------------HHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           95 DNPYSANNYGKTPLY-------------------------------MAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        95 ~~~~~~~~~~~t~l~-------------------------------~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      + ++.+|.+|.||||                               .|+..|+.++++.|+++|++++.+|..|+||+|+
T Consensus       583 d-in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~  661 (823)
T PLN03192        583 N-VHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQV  661 (823)
T ss_pred             C-CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            5 5555666666655                               5666666777888899999999999999999999


Q ss_pred             HHh---HHHHHHHHh
Q 037410          144 QQC---TFILLSLTR  155 (161)
Q Consensus       144 ~~~---~~~~~~l~~  155 (161)
                      |..   ..+...|.+
T Consensus       662 A~~~g~~~iv~~Ll~  676 (823)
T PLN03192        662 AMAEDHVDMVRLLIM  676 (823)
T ss_pred             HHHCCcHHHHHHHHH
Confidence            643   445555544

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.83  E-value=2.2e-19  Score=133.57  Aligned_cols=139  Identities=14%  Similarity=0.026  Sum_probs=103.7

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHh--CCHHHHHHHHHhhHhhhcCCCCCCCccch---------------------hh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKF--GHSDIVSVLVQTAKIAQHGDGEPESGIGA---------------------DR   60 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~---------------------~~   60 (161)
                      +|...++++|.+ ..|.||||.++..  ++.+++++|+++|++++..+. +.+++..                     .+
T Consensus        21 ~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~~-~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~G   98 (494)
T PHA02989         21 FLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGY-IETPLCAVLRNREITSNKIKKIVKLLLKFG   98 (494)
T ss_pred             HHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCCC-CCCcHHHHHhccCcchhhHHHHHHHHHHCC
Confidence            444667888888 6789998766554  368999999999999887542 2333321                     12


Q ss_pred             hhhhhhcCCCccHHHHHHhc---CcHHHHHHHHHcCCCCc-cccCCCCCcHHHHHHhC--CChHHHHHHHhcCCCCCC-C
Q 037410           61 QMIRMANNEKNTALHEAVCH---GNVHVVKILTKQGPDNP-YSANNYGKTPLYMAAKG--RYSEMVIELLETAHQCPM-K  133 (161)
Q Consensus        61 ~~~~~~~~~g~t~l~~a~~~---~~~~~~~~L~~~g~~~~-~~~~~~~~t~l~~A~~~--~~~~~~~~Ll~~g~~~~~-~  133 (161)
                      ..++.++..|.||||.|+..   ++.+++++|++.|++ + +.++..|.||||+|+..  ++.+++++|+++|++++. .
T Consensus        99 adin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gad-in~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~  177 (494)
T PHA02989         99 ADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGIN-VNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKT  177 (494)
T ss_pred             CCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCC-cccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc
Confidence            33556777888898877654   678889999988887 6 67888888999887654  577888999999988887 6


Q ss_pred             CCcccchHHHHH
Q 037410          134 APTERQLCMLQQ  145 (161)
Q Consensus       134 ~~~~~t~l~~~~  145 (161)
                      +..|.||+|++.
T Consensus       178 ~~~g~tpL~~a~  189 (494)
T PHA02989        178 SLYGLTPMNIYL  189 (494)
T ss_pred             cccCCChHHHHH
Confidence            778889988764

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.83  E-value=3.7e-20  Score=144.16  Aligned_cols=122  Identities=24%  Similarity=0.249  Sum_probs=114.0

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      ++...++.++.++..|.||||+|+.+|+.++|++|+++|++++.                  +++.|+||||.||..|+.
T Consensus       525 ~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~a------------------k~~~G~TPLH~Aa~~G~~  586 (1143)
T KOG4177|consen  525 ILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNA------------------KDKLGYTPLHQAAQQGHN  586 (1143)
T ss_pred             HHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccc------------------cCCCCCChhhHHHHcChH
Confidence            45567889999999999999999999999999999999999766                  789999999999999999


Q ss_pred             HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC-----CCCCCCcccchHHHH
Q 037410           84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ-----CPMKAPTERQLCMLQ  144 (161)
Q Consensus        84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~t~l~~~  144 (161)
                      +|+.+|+++|++ ++..+.+|.|||++|++.|+.++++.|+..++.     ....+..|.+|..++
T Consensus       587 ~i~~LLlk~GA~-vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~  651 (1143)
T KOG4177|consen  587 DIAELLLKHGAS-VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVA  651 (1143)
T ss_pred             HHHHHHHHcCCC-CCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHH
Confidence            999999999999 899999999999999999999999999999988     788888999999874

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.82  E-value=5.7e-19  Score=108.05  Aligned_cols=115  Identities=28%  Similarity=0.420  Sum_probs=104.7

Q ss_pred             ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410           14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG   93 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g   93 (161)
                      .+|.+|+||||+|+..++.+++++|++.+...+                  ..+..|.+|+|.|+..+..+++++|+..+
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~------------------~~~~~g~~~l~~a~~~~~~~~~~~ll~~~   63 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVN------------------AKDNDGRTPLHLAAKNGHLEIVKLLLEKG   63 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCC------------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence            456889999999999999999999999987643                  36889999999999999999999999999


Q ss_pred             CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410           94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus        94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      +. .+..+..+.||+|+|+..++.+++++|++++.+.+..+..+.||++++...
T Consensus        64 ~~-~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~  116 (126)
T cd00204          64 AD-VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKN  116 (126)
T ss_pred             CC-ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence            76 677788999999999999999999999999999999999999999987554

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PHA02795 ankyrin-like protein; Provisional

Probab=99.81  E-value=3e-19  Score=128.35  Aligned_cols=133  Identities=13%  Similarity=0.035  Sum_probs=110.6

Q ss_pred             hHHHhCCcccc------ccCCCCCcHHHHHHH--hCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHH
Q 037410            3 EILELCPSLLL------NVNAKGDTPLRVAAK--FGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL   74 (161)
Q Consensus         3 ~ll~~~~~~~~------~~~~~g~t~lh~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l   74 (161)
                      ++|...++.++      .++..++|+||+|+.  .|+.+++++|+++|++++.                    ..+.||+
T Consensus        94 ~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~--------------------~~~~t~l  153 (437)
T PHA02795         94 SALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYK--------------------IECLNAY  153 (437)
T ss_pred             HHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCC--------------------CCCCCHH
Confidence            45666777777      778889999999999  9999999999999998653                    2447899


Q ss_pred             HHHHhcCcHHHHHHHHHcCCCCccccC-----CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---h
Q 037410           75 HEAVCHGNVHVVKILTKQGPDNPYSAN-----NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---C  146 (161)
Q Consensus        75 ~~a~~~~~~~~~~~L~~~g~~~~~~~~-----~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~  146 (161)
                      |.|+..++.+++++|++.|+.+.+..+     ..+.|++|.|...++.+++++|+++|++++.+|..|+||||+|.   .
T Consensus       154 h~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~  233 (437)
T PHA02795        154 FRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGY  233 (437)
T ss_pred             HHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCC
Confidence            999999999999999999975333321     34778999999999999999999999999999999999999964   3


Q ss_pred             HHHHHHHHh
Q 037410          147 TFILLSLTR  155 (161)
Q Consensus       147 ~~~~~~l~~  155 (161)
                      ..+.+.|..
T Consensus       234 ~eiVelLL~  242 (437)
T PHA02795        234 IDLVSWLLE  242 (437)
T ss_pred             HHHHHHHHH
Confidence            445555544

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.81  E-value=1.1e-20  Score=121.99  Aligned_cols=143  Identities=22%  Similarity=0.237  Sum_probs=122.5

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch-------------hhhhhhhhcCCCc
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA-------------DRQMIRMANNEKN   71 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~g~   71 (161)
                      +..++.....++.+||.+++.++-.++...+..++.+|...+..+..+......             ....++..|..|.
T Consensus        82 ~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~Gf  161 (296)
T KOG0502|consen   82 AQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGF  161 (296)
T ss_pred             hccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccccCc
Confidence            345566667788889999999999999999999999999888776666554311             1233567788999


Q ss_pred             cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410           72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF  148 (161)
Q Consensus        72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~  148 (161)
                      |||+||+.+|+++++++|++.|++ ++...+...|+|++|++.|+.++|++|+.++.++|..|.+|-|||-++....
T Consensus       162 TpLiWAaa~G~i~vV~fLL~~GAd-p~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgn  237 (296)
T KOG0502|consen  162 TPLIWAAAKGHIPVVQFLLNSGAD-PDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGN  237 (296)
T ss_pred             hHhHHHHhcCchHHHHHHHHcCCC-hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCC
Confidence            999999999999999999999999 8889999999999999999999999999999999999999999998854433

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.81  E-value=4.6e-19  Score=99.49  Aligned_cols=113  Identities=23%  Similarity=0.204  Sum_probs=101.1

Q ss_pred             cHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcccc
Q 037410           21 TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA  100 (161)
Q Consensus        21 t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  100 (161)
                      -.+.|+.+.|..+-|+.....|.+++.                   ...|++|||+|+..|..+++++|+..|++ ++.+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~-------------------~~ggR~plhyAAD~GQl~ilefli~iGA~-i~~k   63 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNE-------------------IYGGRTPLHYAADYGQLSILEFLISIGAN-IQDK   63 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHH-------------------HhCCcccchHhhhcchHHHHHHHHHhccc-cCCc
Confidence            456789999999999999988866553                   44789999999999999999999999999 8999


Q ss_pred             CCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHH
Q 037410          101 NNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSL  153 (161)
Q Consensus       101 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l  153 (161)
                      |.+|.|||..|+..||.+||++|+++|++...+.-+|.+.+.-.....+..+|
T Consensus        64 DKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eate~edIr~LL  116 (117)
T KOG4214|consen   64 DKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEATEEEDIRELL  116 (117)
T ss_pred             cccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhccHHHHHHHh
Confidence            99999999999999999999999999999999999999998877666666654

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.79  E-value=8.1e-19  Score=136.05  Aligned_cols=134  Identities=19%  Similarity=0.115  Sum_probs=106.7

Q ss_pred             CccccccCCCCCcHHH-HHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhh--------h----------------h
Q 037410            9 PSLLLNVNAKGDTPLR-VAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQ--------M----------------I   63 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~--------~----------------~   63 (161)
                      +.++|..|..|.|||| .|+..++.++++.|++.|.    .+..+...++....        .                .
T Consensus        42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~  117 (743)
T TIGR00870        42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA  117 (743)
T ss_pred             ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence            5678888999999999 8888889999999999885    22233333322110        0                0


Q ss_pred             ----hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC--------------CCCCcHHHHHHhCCChHHHHHHHh
Q 037410           64 ----RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN--------------NYGKTPLYMAAKGRYSEMVIELLE  125 (161)
Q Consensus        64 ----~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~--------------~~~~t~l~~A~~~~~~~~~~~Ll~  125 (161)
                          ......|.||||+|+..|+.+++++|++.|++ ++.++              .+|.||||.|+..++.+++++|++
T Consensus       118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAd-v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~  196 (743)
T TIGR00870       118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS-VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSE  196 (743)
T ss_pred             ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCC-CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhc
Confidence                01124689999999999999999999999988 55432              368999999999999999999999


Q ss_pred             cCCCCCCCCCcccchHHHHHhH
Q 037410          126 TAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus       126 ~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      +|++++.+|..|+||+|++...
T Consensus       197 ~gadin~~d~~g~T~Lh~A~~~  218 (743)
T TIGR00870       197 DPADILTADSLGNTLLHLLVME  218 (743)
T ss_pred             CCcchhhHhhhhhHHHHHHHhh
Confidence            9999999999999999986544

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02792 ankyrin-like protein; Provisional

Probab=99.78  E-value=8.5e-18  Score=125.22  Aligned_cols=121  Identities=9%  Similarity=0.065  Sum_probs=101.8

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCC--CccHHHHHHhcCc
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE--KNTALHEAVCHGN   82 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~t~l~~a~~~~~   82 (161)
                      +...++...  ......+++.||..|+.+++++|+++|++++.                  ++..  +.||||+|+....
T Consensus       327 LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~------------------kD~~g~~~TpLh~A~~n~~  386 (631)
T PHA02792        327 MIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVE------------------DDDNIINIMPLFPTLSIHE  386 (631)
T ss_pred             HHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhh------------------hcCCCCChhHHHHHHHhcc
Confidence            334455543  23467789999999999999999999999765                  4544  5699998877665


Q ss_pred             H---HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410           83 V---HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus        83 ~---~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      .   +++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++|++++.++..|+||++++..
T Consensus       387 ~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        387 SDVLSILKLCKPYIDD-INKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HhHHHHHHHHHhcCCc-cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            4   468888999998 88999999999999999999999999999999999999999999999754

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.78  E-value=2.6e-18  Score=107.35  Aligned_cols=105  Identities=23%  Similarity=0.198  Sum_probs=97.2

Q ss_pred             HHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC
Q 037410           22 PLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN  101 (161)
Q Consensus        22 ~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  101 (161)
                      -+.+|+..+....|+.|++..++-                 ++.+|.++.||||-|+.+|+.+++..|+.+|+. .+.+.
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~-----------------vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T  127 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANH-----------------VNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKT  127 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhcccc-----------------ccccccccccHHHHHHhcCchHHHHHHHHccCC-ccccc
Confidence            467899999999999999876542                 566899999999999999999999999999998 88999


Q ss_pred             CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410          102 NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus       102 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      ..|+||||.||.-.+.+++-+|+++|++++....-..||||++
T Consensus       128 ~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhla  170 (228)
T KOG0512|consen  128 NEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLA  170 (228)
T ss_pred             ccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHh
Confidence            9999999999999999999999999999999999999999995

>PHA02730 ankyrin-like protein; Provisional

Probab=99.77  E-value=2.9e-18  Score=128.80  Aligned_cols=126  Identities=15%  Similarity=0.085  Sum_probs=102.1

Q ss_pred             cccCCCCCcHHHHHHHhC---CHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC--cHHHHH
Q 037410           13 LNVNAKGDTPLRVAAKFG---HSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG--NVHVVK   87 (161)
Q Consensus        13 ~~~~~~g~t~lh~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~--~~~~~~   87 (161)
                      ..+|..|+||||+|+..|   +.+++++|+++|++++.                  +|..|.||||+|+..+  +.++++
T Consensus        35 ~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~------------------kD~~G~TPLh~Aa~~~~~~~eIv~   96 (672)
T PHA02730         35 KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLC------------------RNNEGLTPLGVYSKRKYVKSQIVH   96 (672)
T ss_pred             hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcc------------------cCCCCCChHHHHHHcCCCcHHHHH
Confidence            478889999999999997   59999999999999775                  7899999999998866  799999


Q ss_pred             HHHHcCCCC-ccccCCCCCcHHHHHHh--CCChHHHHHHHh-cCCCCCCCCC-----cccchHHHHH---hHHHHHHHHh
Q 037410           88 ILTKQGPDN-PYSANNYGKTPLYMAAK--GRYSEMVIELLE-TAHQCPMKAP-----TERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        88 ~L~~~g~~~-~~~~~~~~~t~l~~A~~--~~~~~~~~~Ll~-~g~~~~~~~~-----~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      +|++.|+.. ++..+.-+.+|++.++.  +++.+++++|+. .+++++....     .|.+|++++.   ...+++.|..
T Consensus        97 ~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~  176 (672)
T PHA02730         97 LLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLK  176 (672)
T ss_pred             HHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHH
Confidence            999996531 45677778889998888  888999999997 6678776633     7889998854   3445555544


Q ss_pred             h
Q 037410          156 Y  156 (161)
Q Consensus       156 ~  156 (161)
                      .
T Consensus       177 ~  177 (672)
T PHA02730        177 S  177 (672)
T ss_pred             c
Confidence            3

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.76  E-value=3.9e-18  Score=122.21  Aligned_cols=123  Identities=24%  Similarity=0.243  Sum_probs=107.6

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN   82 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~   82 (161)
                      .+|.. ++..+..+.+|.|+||.||.-.+.+||++|+++|++++.                  .+..++||+|.|+..|+
T Consensus        58 ~ll~~-ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~------------------~d~e~wtPlhaaascg~  118 (527)
T KOG0505|consen   58 KLLNR-GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNA------------------QDNEGWTPLHAAASCGY  118 (527)
T ss_pred             HHhcc-CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccc------------------cccccCCcchhhccccc
Confidence            34433 466688999999999999999999999999999999765                  78899999999999999


Q ss_pred             HHHHHHHHHcCCCC----------------------------------------------------------ccccCCCC
Q 037410           83 VHVVKILTKQGPDN----------------------------------------------------------PYSANNYG  104 (161)
Q Consensus        83 ~~~~~~L~~~g~~~----------------------------------------------------------~~~~~~~~  104 (161)
                      ..++++|+..|++.                                                          .+..+..|
T Consensus       119 ~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG  198 (527)
T KOG0505|consen  119 LNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARG  198 (527)
T ss_pred             HHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccccccc
Confidence            99999999988761                                                          23333458


Q ss_pred             CcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410          105 KTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus       105 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      .|.||.|+..|+.+..++|+++|.+++.+|.+||||||.+
T Consensus       199 ~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAA  238 (527)
T KOG0505|consen  199 ATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAA  238 (527)
T ss_pred             chHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHH
Confidence            9999999999999999999999999999999999999975

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.74  E-value=2e-17  Score=123.68  Aligned_cols=151  Identities=17%  Similarity=0.157  Sum_probs=117.5

Q ss_pred             hhHHHhCCccccccC----CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCC----CCccch-hhhhhhhhcCCCcc
Q 037410            2 EEILELCPSLLLNVN----AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEP----ESGIGA-DRQMIRMANNEKNT   72 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~----~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~g~t   72 (161)
                      +.||+..|..+|..-    ..|.||||+|+.+.+.++|.+|+..|++++++-.=.    .+.-.. ......-.-..|..
T Consensus       163 ~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEy  242 (782)
T KOG3676|consen  163 RVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEY  242 (782)
T ss_pred             HHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccC
Confidence            346666676666552    249999999999999999999999999988731000    000000 00001111345789


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC--CCCCCCcccchHHHHHhHHHH
Q 037410           73 ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ--CPMKAPTERQLCMLQQCTFIL  150 (161)
Q Consensus        73 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~~~t~l~~~~~~~~~  150 (161)
                      ||.+|+.-++.+|+++|++.|++ ++.+|.+|+|.||+.+.+-..+|..+++++|++  ...+|..|-|||.+|......
T Consensus       243 PLSfAAC~nq~eivrlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~  321 (782)
T KOG3676|consen  243 PLSFAACTNQPEIVRLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKK  321 (782)
T ss_pred             chHHHHHcCCHHHHHHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhH
Confidence            99999999999999999999999 899999999999999999889999999999999  999999999999998766655


Q ss_pred             HHH
Q 037410          151 LSL  153 (161)
Q Consensus       151 ~~l  153 (161)
                      +++
T Consensus       322 emf  324 (782)
T KOG3676|consen  322 EMF  324 (782)
T ss_pred             HHH
Confidence            543

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.73  E-value=2.2e-17  Score=122.66  Aligned_cols=129  Identities=22%  Similarity=0.201  Sum_probs=112.8

Q ss_pred             CccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410            9 PSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI   88 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~   88 (161)
                      +...+..|.+|+|.||.|+..|+.+++++|+++-+.                  ++..+..|.+|+|+|+|.|+.++++.
T Consensus        39 sds~n~qd~~gfTalhha~Lng~~~is~llle~ea~------------------ldl~d~kg~~plhlaaw~g~~e~vkm  100 (854)
T KOG0507|consen   39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL------------------LDLCDTKGILPLHLAAWNGNLEIVKM  100 (854)
T ss_pred             CccccccCccchhHHHHHHhcCchHHHHHHhcchhh------------------hhhhhccCcceEEehhhcCcchHHHH
Confidence            345677888999999999999999999999998766                  55578899999999999999999999


Q ss_pred             HHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhh
Q 037410           89 LTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRY  156 (161)
Q Consensus        89 L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~  156 (161)
                      ++..+.. .+..+-.|.||||.|+++|+.+++.+|+.+|++.-.+|..+.|++.++   +...+..+|.+.
T Consensus       101 ll~q~d~-~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~  170 (854)
T KOG0507|consen  101 LLLQTDI-LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK  170 (854)
T ss_pred             HHhcccC-CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence            9999855 888899999999999999999999999999999999999999999985   333444444443

>PHA02792 ankyrin-like protein; Provisional

Probab=99.71  E-value=8.7e-17  Score=119.91  Aligned_cols=120  Identities=17%  Similarity=0.092  Sum_probs=98.8

Q ss_pred             CccccccCCCCCcHHHHHHH-hCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh-cCcHHHH
Q 037410            9 PSLLLNVNAKGDTPLRVAAK-FGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC-HGNVHVV   86 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~-~~~~~~~   86 (161)
                      ....+..+.+|.+|+|+-|. .|+.|++++|+++|++++.                  ++..+.+++++|+. .++.|++
T Consensus        61 ~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~------------------~~n~~~~~l~ya~~~~~~~eiv  122 (631)
T PHA02792         61 LSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINS------------------IKNGINIVEKYATTSNPNVDVF  122 (631)
T ss_pred             HhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCccc------------------ccCCCCcceeEeecCCCChHHH
Confidence            34456677888889987655 6788999999999998765                  56678889999865 6899999


Q ss_pred             HHHHHcCCCC-----------------------------------ccccCCCCCcHHHHHHhCC-------ChHHHHHHH
Q 037410           87 KILTKQGPDN-----------------------------------PYSANNYGKTPLYMAAKGR-------YSEMVIELL  124 (161)
Q Consensus        87 ~~L~~~g~~~-----------------------------------~~~~~~~~~t~l~~A~~~~-------~~~~~~~Ll  124 (161)
                      ++|++.|++.                                   ++..+..|.||||+|+.++       +.+++++|+
T Consensus       123 k~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li  202 (631)
T PHA02792        123 KLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLI  202 (631)
T ss_pred             HHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHH
Confidence            9999999751                                   2345667999999999988       799999999


Q ss_pred             hcCCCCCCCCCcccchHHHHHh
Q 037410          125 ETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus       125 ~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      ++|++++.+|..|.||||++..
T Consensus       203 ~~g~~~~~~d~~g~t~l~~~~~  224 (631)
T PHA02792        203 SHEKEMRYYTYREHTTLYYYVD  224 (631)
T ss_pred             hCCCCcCccCCCCChHHHHHHH
Confidence            9999999999999999998543

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.70  E-value=3.1e-17  Score=127.35  Aligned_cols=126  Identities=17%  Similarity=0.125  Sum_probs=97.7

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +..|.||||+||..|+.+++++|+++|++++....-..    ............|.+|||.|+..++.+++++|++.|++
T Consensus       125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~----~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gad  200 (743)
T TIGR00870       125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDF----FVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPAD  200 (743)
T ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCch----hhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcc
Confidence            34699999999999999999999999998875321000    00000001234689999999999999999999999987


Q ss_pred             CccccCCCCCcHHHHHHhCC---------ChHHHHHHHhcCCCC-------CCCCCcccchHHHHHh
Q 037410           96 NPYSANNYGKTPLYMAAKGR---------YSEMVIELLETAHQC-------PMKAPTERQLCMLQQC  146 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~---------~~~~~~~Ll~~g~~~-------~~~~~~~~t~l~~~~~  146 (161)
                       ++.+|..|+||||+|+..+         ...+.+++++.++..       +..|..|.||+++|..
T Consensus       201 -in~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~  266 (743)
T TIGR00870       201 -ILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAK  266 (743)
T ss_pred             -hhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhh
Confidence             8899999999999999986         234667777776554       6679999999998643

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.69  E-value=7e-16  Score=103.39  Aligned_cols=117  Identities=26%  Similarity=0.306  Sum_probs=106.3

Q ss_pred             cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc-----HHH
Q 037410           11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN-----VHV   85 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~   85 (161)
                      .....+..+.++++.++..+..+++++++..|.+++.                  ++..|.||+|+|+..++     .++
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------~~~~g~t~l~~a~~~~~~~~~~~~~  126 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNA------------------KDADGDTPLHLAALNGNPPEGNIEV  126 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCccc------------------ccCCCCcHHHHHHhcCCcccchHHH
Confidence            3444566699999999999999999999999988654                  79999999999999999     999


Q ss_pred             HHHHHHcCC--CCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           86 VKILTKQGP--DNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        86 ~~~L~~~g~--~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      ++.|++.|+  +..+..+..|.||||+|+..|+.+++++|++.|++++.++..|.|+++.+.
T Consensus       127 ~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~  188 (235)
T COG0666         127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAA  188 (235)
T ss_pred             HHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhc
Confidence            999999999  557778999999999999999999999999999999999999999999853

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.69  E-value=1.8e-16  Score=121.26  Aligned_cols=103  Identities=25%  Similarity=0.307  Sum_probs=95.1

Q ss_pred             HHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC
Q 037410           22 PLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN  101 (161)
Q Consensus        22 ~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  101 (161)
                      .|+.|+..|+.++++.|++.|++++.                  +|..|.||||+|+..|+.+++++|++.|++ ++.+|
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~------------------~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d  145 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNC------------------RDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLD  145 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCC------------------cCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCC
Confidence            58899999999999999999988654                  788999999999999999999999999998 88999


Q ss_pred             CCCCcHHHHHHhCCChHHHHHHHhc-------CCCCCCCCCcccchHHH
Q 037410          102 NYGKTPLYMAAKGRYSEMVIELLET-------AHQCPMKAPTERQLCML  143 (161)
Q Consensus       102 ~~~~t~l~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~~~t~l~~  143 (161)
                      ..|.||||+|+..++.+++++|+++       |++.+..+..|.+|+..
T Consensus       146 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~  194 (664)
T PTZ00322        146 KDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLE  194 (664)
T ss_pred             CCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccch
Confidence            9999999999999999999999999       88999999888877654

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.66  E-value=2.7e-16  Score=88.42  Aligned_cols=82  Identities=26%  Similarity=0.316  Sum_probs=69.9

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHH
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKIL   89 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L   89 (161)
                      .++|.. ..|++|||||+-+|..+++++|+..|++++.                  +|++|-|||..|++-|+..|+++|
T Consensus        26 ~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~------------------kDKygITPLLsAvwEGH~~cVklL   86 (117)
T KOG4214|consen   26 LNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQD------------------KDKYGITPLLSAVWEGHRDCVKLL   86 (117)
T ss_pred             ccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCC------------------ccccCCcHHHHHHHHhhHHHHHHH
Confidence            344433 3799999999999999999999999999665                  899999999999999999999999


Q ss_pred             HHcCCCCccccCCCCCcHHHHH
Q 037410           90 TKQGPDNPYSANNYGKTPLYMA  111 (161)
Q Consensus        90 ~~~g~~~~~~~~~~~~t~l~~A  111 (161)
                      ++.|++ ...+..+|.+.+..+
T Consensus        87 L~~GAd-rt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   87 LQNGAD-RTIHAPDGTALIEAT  107 (117)
T ss_pred             HHcCcc-cceeCCCchhHHhhc
Confidence            999998 666777777665443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.66  E-value=1.2e-16  Score=84.34  Aligned_cols=56  Identities=29%  Similarity=0.345  Sum_probs=32.5

Q ss_pred             HHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           89 LTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        89 L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      |++.++.+++.+|..|.||||+|+.+|+.+++++|+++|++++.+|..|+||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            45666444888999999999999999999999999999999999999999999875

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.64  E-value=5.7e-16  Score=106.94  Aligned_cols=98  Identities=23%  Similarity=0.264  Sum_probs=86.9

Q ss_pred             cccccC-CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHH
Q 037410           11 LLLNVN-AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKIL   89 (161)
Q Consensus        11 ~~~~~~-~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L   89 (161)
                      ++|.+- ..|.|+|++|+.+|+.++|+.||..|+++|.                  +|.+|.|+|++||.+|+.|++++|
T Consensus       331 nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNi------------------QDdDGSTALMCA~EHGhkEivklL  392 (452)
T KOG0514|consen  331 DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNI------------------QDDDGSTALMCAAEHGHKEIVKLL  392 (452)
T ss_pred             CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCcc------------------ccCCccHHHhhhhhhChHHHHHHH
Confidence            444443 4599999999999999999999999999665                  789999999999999999999999


Q ss_pred             HHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhc
Q 037410           90 TKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET  126 (161)
Q Consensus        90 ~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~  126 (161)
                      +.....+...+|.+|.|+|.+|...||.++.-+|..+
T Consensus       393 LA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  393 LAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             hccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            9886555889999999999999999999998888765

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.64  E-value=4.3e-16  Score=115.94  Aligned_cols=137  Identities=28%  Similarity=0.259  Sum_probs=116.1

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      -++|....+.++..|.+|.+|||+|++.|+.++++.++.++..++.                  .+..|.+|||.|++.|
T Consensus        65 s~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na------------------~~~e~~tplhlaaqhg  126 (854)
T KOG0507|consen   65 SKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA------------------VNIENETPLHLAAQHG  126 (854)
T ss_pred             HHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCc------------------ccccCcCccchhhhhc
Confidence            3567778889999999999999999999999999999999866444                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC--------CCCCCCcccchHHHHHhHHHHHHH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ--------CPMKAPTERQLCMLQQCTFILLSL  153 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~--------~~~~~~~~~t~l~~~~~~~~~~~l  153 (161)
                      +.+++.+|+.++++ +-..+..+.|++.+|++.|..++++.|++....        -..++..+-+|+|+++.....+..
T Consensus       127 h~dvv~~Ll~~~ad-p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~  205 (854)
T KOG0507|consen  127 HLEVVFYLLKKNAD-PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECM  205 (854)
T ss_pred             chHHHHHHHhcCCC-ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHH
Confidence            99999999999998 678899999999999999999999999876322        244566777899998777766665


Q ss_pred             Hhhh
Q 037410          154 TRYS  157 (161)
Q Consensus       154 ~~~~  157 (161)
                      .+..
T Consensus       206 ~~ll  209 (854)
T KOG0507|consen  206 QALL  209 (854)
T ss_pred             HHHH
Confidence            5443

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.64  E-value=5.4e-15  Score=85.56  Aligned_cols=78  Identities=27%  Similarity=0.257  Sum_probs=66.6

Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHH
Q 037410           74 LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFIL  150 (161)
Q Consensus        74 l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~  150 (161)
                      ||+|+..|+.+++++|++.+.+ .+.    |.||||+|+..|+.+++++|+++|++++.++..|+||+|++   +...+.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            6899999999999999998876 433    88999999999999999999999999999999999999995   344455


Q ss_pred             HHHHhh
Q 037410          151 LSLTRY  156 (161)
Q Consensus       151 ~~l~~~  156 (161)
                      +.|..+
T Consensus        76 ~~Ll~~   81 (89)
T PF12796_consen   76 KLLLEH   81 (89)
T ss_dssp             HHHHHT
T ss_pred             HHHHHc
Confidence            555544

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.63  E-value=5.1e-16  Score=81.86  Aligned_cols=56  Identities=34%  Similarity=0.536  Sum_probs=33.2

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA   77 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a   77 (161)
                      ||+..+.+++.+|..|.||||+||.+|+.+++++|++.|.+++.                  +|..|.||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------------------~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------------------KDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------------------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------------------CcCCCCCHHHhC
Confidence            45666789999999999999999999999999999999998655                  899999999987

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.62  E-value=1.6e-15  Score=79.46  Aligned_cols=54  Identities=35%  Similarity=0.535  Sum_probs=44.9

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHH
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILT   90 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~   90 (161)
                      |+||||+||+.|+.+++++|++.|.+++.                  +|..|.||+|+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------------------~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINA------------------QDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------------------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence            78999999999999999999999988665                  6889999999999999999999985

...

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.62  E-value=6.8e-16  Score=103.98  Aligned_cols=111  Identities=27%  Similarity=0.249  Sum_probs=93.2

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN   82 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~   82 (161)
                      +.|..-++-+|..+....||||+|+.+|+.++|+.|++..++++.                  ++..|+||||+||.-|+
T Consensus        51 emll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna------------------vnehgntplhyacfwgy  112 (448)
T KOG0195|consen   51 EMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA------------------VNEHGNTPLHYACFWGY  112 (448)
T ss_pred             HHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch------------------hhccCCCchhhhhhhcH
Confidence            455566889999999999999999999999999999999998665                  88999999999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCC
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPM  132 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~  132 (161)
                      ..+++-|+..|+. .+.-+..|.||+..|.-.-...+.+..-++|.+++.
T Consensus       113 dqiaedli~~ga~-v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nr  161 (448)
T KOG0195|consen  113 DQIAEDLISCGAA-VNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNR  161 (448)
T ss_pred             HHHHHHHHhccce-eeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCc
Confidence            9999999999998 788999999999987544333344444456766553

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.61  E-value=2.8e-15  Score=78.59  Aligned_cols=54  Identities=39%  Similarity=0.511  Sum_probs=45.6

Q ss_pred             CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHH
Q 037410           70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL  124 (161)
Q Consensus        70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll  124 (161)
                      |.||+|+|+..|+.+++++|++.|.+ ++.+|..|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            68999999999999999999999988 8889999999999999999999999986

...

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.59  E-value=2.5e-14  Score=107.44  Aligned_cols=124  Identities=23%  Similarity=0.273  Sum_probs=98.3

Q ss_pred             cccccCCCCCcHHHHHHH---hCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410           11 LLLNVNAKGDTPLRVAAK---FGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      .++.+...|.|+||.|.-   .++.+++..|++.-...--             .....-..+|.||||.|+.+.+.++|+
T Consensus       135 ~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lin-------------d~~~~eeY~GqSaLHiAIv~~~~~~V~  201 (782)
T KOG3676|consen  135 KLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLIN-------------DIYTSEEYYGQSALHIAIVNRDAELVR  201 (782)
T ss_pred             ccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhh-------------hhhhhHhhcCcchHHHHHHhccHHHHH
Confidence            345556679999999987   3446889999987553211             011223578999999999999999999


Q ss_pred             HHHHcCCCCccc--------------c---------CCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           88 ILTKQGPDNPYS--------------A---------NNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        88 ~L~~~g~~~~~~--------------~---------~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      +|++.|++. +.              .         -..|..||..|+..++.+++++|+++|+|++.+|.+|+|.||.-
T Consensus       202 lLl~~gADV-~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~l  280 (782)
T KOG3676|consen  202 LLLAAGADV-HARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHML  280 (782)
T ss_pred             HHHHcCCch-hhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHH
Confidence            999999982 21              1         33688999999999999999999999999999999999999984


Q ss_pred             HhHH
Q 037410          145 QCTF  148 (161)
Q Consensus       145 ~~~~  148 (161)
                      ....
T Consensus       281 Vi~~  284 (782)
T KOG3676|consen  281 VIHF  284 (782)
T ss_pred             HHHH
Confidence            4443

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.58  E-value=1.8e-14  Score=96.55  Aligned_cols=106  Identities=33%  Similarity=0.463  Sum_probs=94.9

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCC-----HHHHHHHHHhhH--hhhcCCCCCCCccchhhhhhhhhcCCCccHHHH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGH-----SDIVSVLVQTAK--IAQHGDGEPESGIGADRQMIRMANNEKNTALHE   76 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~-----~~~v~~Ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~   76 (161)
                      .+...+..++.+|..|.||||+|+..++     .++++.|++.|.  ..                 ....+..|.||+|+
T Consensus        91 ~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~-----------------~~~~~~~g~tpl~~  153 (235)
T COG0666          91 LLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV-----------------NNLRDEDGNTPLHW  153 (235)
T ss_pred             HHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC-----------------ccccCCCCCchhHH
Confidence            3445567779999999999999999999     999999999998  22                 22468999999999


Q ss_pred             HHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410           77 AVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA  127 (161)
Q Consensus        77 a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g  127 (161)
                      |+..|+.++++.|+..|++ ++..+..|.|++++|+..++.+++..+++.+
T Consensus       154 A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         154 AALNGDADIVELLLEAGAD-PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             HHHcCchHHHHHHHhcCCC-CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999998 7788999999999999999999999999965

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.58  E-value=4.1e-15  Score=107.13  Aligned_cols=97  Identities=25%  Similarity=0.186  Sum_probs=60.2

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHH
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKIL   89 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L   89 (161)
                      .+.-..+.+|.|+||.|+..||.+||+||++.|.++|.                  .|++||||||+|+..++..+++.|
T Consensus       574 ~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------------------~DSdGWTPLHCAASCNnv~~ckqL  635 (752)
T KOG0515|consen  574 TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------------------ADSDGWTPLHCAASCNNVPMCKQL  635 (752)
T ss_pred             cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------------------ccCCCCchhhhhhhcCchHHHHHH
Confidence            34444566677777777777777777777777666554                  566677777777777777777777


Q ss_pred             HHcCCCCccccCCCCCcHHHHH--HhCCChHHHHHHH
Q 037410           90 TKQGPDNPYSANNYGKTPLYMA--AKGRYSEMVIELL  124 (161)
Q Consensus        90 ~~~g~~~~~~~~~~~~t~l~~A--~~~~~~~~~~~Ll  124 (161)
                      ++.|+...-.+-.++.|+..-.  .+.|+.+|.++|-
T Consensus       636 Ve~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~  672 (752)
T KOG0515|consen  636 VESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY  672 (752)
T ss_pred             HhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence            7766653333344566665544  3345666666654

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.57  E-value=7.7e-14  Score=85.11  Aligned_cols=99  Identities=37%  Similarity=0.486  Sum_probs=86.6

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHH
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~   86 (161)
                      ..+...+..+..|.+|+|+|+..++.+++++|++.+...+                  ..+..+.+|+|+|+..++.+++
T Consensus        28 ~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~------------------~~~~~~~~~l~~a~~~~~~~~~   89 (126)
T cd00204          28 ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN------------------ARDKDGNTPLHLAARNGNLDVV   89 (126)
T ss_pred             HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc------------------ccCCCCCCHHHHHHHcCcHHHH
Confidence            3445557888899999999999999999999999986533                  3577889999999999999999


Q ss_pred             HHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHH
Q 037410           87 KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL  124 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll  124 (161)
                      ++|+..+.. .+..+..+.||++.|...++.+++++|+
T Consensus        90 ~~L~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          90 KLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHcCCC-CcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            999999876 6778899999999999999999998874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.54  E-value=3.6e-14  Score=95.54  Aligned_cols=99  Identities=24%  Similarity=0.216  Sum_probs=78.0

Q ss_pred             CccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410            9 PSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI   88 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~   88 (161)
                      ...+|.+|+.|.+||.-|+..|+.+++++|++.|+++|..                 ....+.||||+|+..|+.+++++
T Consensus        35 vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~-----------------qhg~~YTpLmFAALSGn~dvcrl   97 (396)
T KOG1710|consen   35 VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK-----------------QHGTLYTPLMFAALSGNQDVCRL   97 (396)
T ss_pred             hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc-----------------cccccccHHHHHHHcCCchHHHH
Confidence            4567788888888888888888888888888888887652                 35667788888888888888888


Q ss_pred             HHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh
Q 037410           89 LTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE  125 (161)
Q Consensus        89 L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~  125 (161)
                      |++.|+. ....+.-|+|+-.+|+.-|+.+||..+-+
T Consensus        98 lldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   98 LLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             HHhccCc-cccccchhhhHHHHHHHhcchHHHHHHhc
Confidence            8888887 66777788888888888888888776543

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.47  E-value=1.4e-12  Score=88.05  Aligned_cols=112  Identities=19%  Similarity=0.217  Sum_probs=98.8

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPY   98 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~   98 (161)
                      -..||.-++-.|..+-...|++---.                  ++++|..|.++|..|+..|+.+++++|++.|++...
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~------------------vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~   73 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQ------------------VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVND   73 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhh------------------hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCc
Confidence            46789999999999888888875333                  556899999999999999999999999999999666


Q ss_pred             ccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410           99 SANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF  148 (161)
Q Consensus        99 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~  148 (161)
                      .++..+.|||+.|+..|+.++.++|++.|+.....|.-|+|+..+|....
T Consensus        74 ~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG  123 (396)
T KOG1710|consen   74 KQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVG  123 (396)
T ss_pred             ccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhc
Confidence            67778999999999999999999999999999999999999998865443

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=2.6e-13  Score=98.04  Aligned_cols=102  Identities=28%  Similarity=0.316  Sum_probs=87.3

Q ss_pred             HHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCC
Q 037410           23 LRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN  102 (161)
Q Consensus        23 lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~  102 (161)
                      |.-|+-.|-+++|+.++..-.++.                  +.+..|-|+||-|+..|+.++|+||++.|++ ++..|.
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpS------------------qpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DS  614 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPS------------------QPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADS  614 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCC------------------CCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccC
Confidence            445778899999999888766544                  4788999999999999999999999999998 899999


Q ss_pred             CCCcHHHHHHhCCChHHHHHHHhcCCCCCC-CCCcccchHHH
Q 037410          103 YGKTPLYMAAKGRYSEMVIELLETAHQCPM-KAPTERQLCML  143 (161)
Q Consensus       103 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~t~l~~  143 (161)
                      +|+||||.|+.-++.-+++.|+++|+-+.. .-.++.||...
T Consensus       615 dGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eK  656 (752)
T KOG0515|consen  615 DGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEK  656 (752)
T ss_pred             CCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhh
Confidence            999999999999999999999999976644 34566777753

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.42  E-value=7.9e-13  Score=101.47  Aligned_cols=90  Identities=26%  Similarity=0.304  Sum_probs=76.9

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      +|...+++++.+|..|+||||+|+..|+.+++++|++.|++++.                  +|..|.||||+|+..++.
T Consensus       100 ~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------------------~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322        100 ILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------------------LDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHCCcH
Confidence            34456788999999999999999999999999999999988654                  788999999999999999


Q ss_pred             HHHHHHHHc-------CCCCccccCCCCCcHHHHHH
Q 037410           84 HVVKILTKQ-------GPDNPYSANNYGKTPLYMAA  112 (161)
Q Consensus        84 ~~~~~L~~~-------g~~~~~~~~~~~~t~l~~A~  112 (161)
                      +++++|+..       ++. .+..+..|.+|+..+.
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~-~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGAN-AKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHHhCCCcccccCCC-CCccccCCCCccchhh
Confidence            999999998       665 5566667777766543

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.34  E-value=2.3e-12  Score=100.35  Aligned_cols=140  Identities=19%  Similarity=0.227  Sum_probs=91.7

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch----------------hhhhhhhh
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA----------------DRQMIRMA   66 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~   66 (161)
                      +++...++.+..+|+.|++||.+|+-.|+..+|+.|+.+.++++.+......-...                ....-..+
T Consensus       774 ellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehr  853 (2131)
T KOG4369|consen  774 ELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHR  853 (2131)
T ss_pred             HHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhcccccc
Confidence            45556677888888888888888888888888888888888877754332222111                11112334


Q ss_pred             cCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC--CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC-cccchHHH
Q 037410           67 NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN--NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP-TERQLCML  143 (161)
Q Consensus        67 ~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~--~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~l~~  143 (161)
                      +-...|||.+|...|+++++..|+..|.+ ++.+.  ..|.+||++|..+||...++.|++.|-++|..-. +.+|+|.+
T Consensus       854 nvsDytPlsla~Sggy~~iI~~llS~Gse-InSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltl  932 (2131)
T KOG4369|consen  854 NVSDYTPLSLARSGGYTKIIHALLSSGSE-INSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTL  932 (2131)
T ss_pred             chhhcCchhhhcCcchHHHHHHHhhcccc-cccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceee
Confidence            45566777777777777777777777766 44332  2466777777777777777777777766665533 34555544

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.33  E-value=8.6e-13  Score=102.64  Aligned_cols=121  Identities=23%  Similarity=0.207  Sum_probs=101.2

Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCC
Q 037410           17 AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDN   96 (161)
Q Consensus        17 ~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~   96 (161)
                      .+-.|+|-.||..|+.|++++|+..|+++..                  +|+.|.+||..|+..|+..+++.|+...++.
T Consensus       755 ~n~~t~LT~acaggh~e~vellv~rganieh------------------rdkkgf~plImaatagh~tvV~~llk~ha~v  816 (2131)
T KOG4369|consen  755 PNIKTNLTSACAGGHREEVELLVVRGANIEH------------------RDKKGFVPLIMAATAGHITVVQDLLKAHADV  816 (2131)
T ss_pred             ccccccccccccCccHHHHHHHHHhcccccc------------------cccccchhhhhhcccCchHHHHHHHhhhhhh
Confidence            3467999999999999999999999999766                  7888889998888889999999888888875


Q ss_pred             ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHh
Q 037410           97 PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTR  155 (161)
Q Consensus        97 ~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~  155 (161)
                      ....|+.+.|+|.+||..|+.++|++|+.+|++-..++-...||+.++   ++..+..+|..
T Consensus       817 eaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS  878 (2131)
T KOG4369|consen  817 EAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLS  878 (2131)
T ss_pred             hhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhh
Confidence            556788888999999999999999999999988888888888988874   44445555443

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=99.19  E-value=2.7e-11  Score=86.72  Aligned_cols=95  Identities=26%  Similarity=0.264  Sum_probs=85.7

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +.++..++.+|++.|....++.+.-.|.+.                  +++|.+.+|+||+|+.-|+.+++++|++.-..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~------------------~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv  564 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDL------------------ETKDYDDRTALHVAAAEGHVEVVKFLLNACKV  564 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccc------------------cccccccchhheeecccCceeHHHHHHHHHcC
Confidence            345677899999999999999999888874                  45899999999999999999999999999877


Q ss_pred             CccccCCCCCcHHHHHHhCCChHHHHHHHhcCC
Q 037410           96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAH  128 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~  128 (161)
                      +++.+|++|+|||.-|...+|.+++++|-+...
T Consensus       565 ~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  565 DPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             CCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence            799999999999999999999999999987653

>PF13606 Ank_3: Ankyrin repeat

Probab=99.17  E-value=3e-11  Score=55.00  Aligned_cols=29  Identities=34%  Similarity=0.544  Sum_probs=26.8

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhh
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQ   46 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~   46 (161)
                      +|+||||+||+.|+.+++++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            58999999999999999999999998754

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=99.15  E-value=2.3e-11  Score=92.38  Aligned_cols=89  Identities=24%  Similarity=0.316  Sum_probs=78.2

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHH
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~   86 (161)
                      .+....|++|..|+|+||+|+..+..+++++|+++|.++..+|                 ...|+||||-|...|+++|+
T Consensus        40 ~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD-----------------~ESG~taLHRaiyyG~idca  102 (1267)
T KOG0783|consen   40 SCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQD-----------------EESGYTALHRAIYYGNIDCA  102 (1267)
T ss_pred             hhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecc-----------------ccccchHhhHhhhhchHHHH
Confidence            3555688899999999999999999999999999998866522                 35699999999999999999


Q ss_pred             HHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410           87 KILTKQGPDNPYSANNYGKTPLYMAAK  113 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~  113 (161)
                      ..|+.+|.. ...+|..|.+||...++
T Consensus       103 ~lLL~~g~S-L~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  103 SLLLSKGRS-LRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             HHHHhcCCc-eEEecccCCCHHHHHhh
Confidence            999999988 88999999999999887

>PF13606 Ank_3: Ankyrin repeat

Probab=99.14  E-value=8.9e-11  Score=53.42  Aligned_cols=29  Identities=38%  Similarity=0.432  Sum_probs=22.0

Q ss_pred             CCCcHHHHHHhCCChHHHHHHHhcCCCCC
Q 037410          103 YGKTPLYMAAKGRYSEMVIELLETAHQCP  131 (161)
Q Consensus       103 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~  131 (161)
                      +|+||||+|++.|+.+++++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            46777777777777777777777777765

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=99.13  E-value=3.6e-10  Score=81.46  Aligned_cols=95  Identities=24%  Similarity=0.299  Sum_probs=82.2

Q ss_pred             ccCCCCCcH------HHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410           14 NVNAKGDTP------LRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus        14 ~~~~~g~t~------lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      .+|.+|.+.      ||-+++.|+.+..-.|+..|+..|..                 .-..|.||||.|+..|..--++
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~-----------------hpekg~TpLHvAAk~Gq~~Q~E  184 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFF-----------------HPEKGNTPLHVAAKAGQILQAE  184 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCC-----------------CcccCCchhHHHHhccchhhhh
Confidence            356666554      99999999999999999999997762                 2456999999999999999999


Q ss_pred             HHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhc
Q 037410           88 ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET  126 (161)
Q Consensus        88 ~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~  126 (161)
                      +|+-+|++ +...|.+|.||+.+|-..||.++.+.|++.
T Consensus       185 lL~vYGAD-~~a~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  185 LLAVYGAD-PGAQDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             HHhhccCC-CCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            99999999 889999999999999999998887766654

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=99.13  E-value=2.9e-10  Score=83.41  Aligned_cols=103  Identities=26%  Similarity=0.347  Sum_probs=91.4

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      .+..+.+++.+..+.||+|+.-|+-++|+|++++|..                .+++..+..|.|+||-|+..++..++.
T Consensus       888 ~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~----------------elld~~de~get~lhkaa~~~~r~vc~  951 (1004)
T KOG0782|consen  888 NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS----------------ELLDMADETGETALHKAACQRNRAVCQ  951 (1004)
T ss_pred             cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH----------------HHHHHHhhhhhHHHHHHHHhcchHHHH
Confidence            4556678889999999999999999999999999875                336778889999999999999999999


Q ss_pred             HHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410           88 ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA  127 (161)
Q Consensus        88 ~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g  127 (161)
                      +|++.|+. ...+|..|.||-.-|-+.|..+...+|-.+.
T Consensus       952 ~lvdagas-l~ktd~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  952 LLVDAGAS-LRKTDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             HHHhcchh-heecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence            99999998 7889999999999999999999999887643

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=99.11  E-value=1.8e-10  Score=53.81  Aligned_cols=33  Identities=27%  Similarity=0.313  Sum_probs=26.9

Q ss_pred             CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC
Q 037410          103 YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP  135 (161)
Q Consensus       103 ~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~  135 (161)
                      +|.||||+|+..++.+++++|+++|++++.+|.
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            478888888888888888888888888887763

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=99.04  E-value=1.7e-10  Score=87.83  Aligned_cols=80  Identities=20%  Similarity=0.170  Sum_probs=75.5

Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchH
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLC  141 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l  141 (161)
                      .+++|..|++++|.++..+..++++.|+++|.+ +..+|. .|.||||-|..+|+.+|+-.|+.+|+....+|++|..|+
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglspl  123 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPL  123 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCce-eeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHH
Confidence            677899999999999999999999999999988 777776 699999999999999999999999999999999999999


Q ss_pred             HH
Q 037410          142 ML  143 (161)
Q Consensus       142 ~~  143 (161)
                      +.
T Consensus       124 q~  125 (1267)
T KOG0783|consen  124 QF  125 (1267)
T ss_pred             HH
Confidence            86

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=99.02  E-value=4.3e-10  Score=52.49  Aligned_cols=31  Identities=39%  Similarity=0.586  Sum_probs=28.5

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcC
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHG   48 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~   48 (161)
                      +|+||||+|+..|+.+++++|+++|++++..
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~   31 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINAR   31 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            5899999999999999999999999987763

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.98  E-value=2.5e-09  Score=78.51  Aligned_cols=93  Identities=23%  Similarity=0.260  Sum_probs=77.4

Q ss_pred             HHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC
Q 037410           22 PLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN  101 (161)
Q Consensus        22 ~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  101 (161)
                      -|.-|....+...+-+|+.+|.......              ..-+..|.|+||+||..|+..+.++|+.+|.+ ....|
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~--------------t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rd  691 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNE--------------TCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARD  691 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhc--------------cccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecc
Confidence            3556666667777888888887644311              12356789999999999999999999999998 78999


Q ss_pred             CCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410          102 NYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus       102 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      .+|+|+|.+|-+.|..+|+..|+++|..
T Consensus       692 a~g~t~l~yar~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  692 AHGRTALFYARQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             cCCchhhhhHhhcccHHHHHHHHHcCCC
Confidence            9999999999999999999999999954

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.91  E-value=5.8e-09  Score=75.89  Aligned_cols=90  Identities=28%  Similarity=0.293  Sum_probs=73.3

Q ss_pred             cHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcccc
Q 037410           21 TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA  100 (161)
Q Consensus        21 t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  100 (161)
                      .|+|++......+.++..+......                .++..|..|.||||.|+..|+.++++.|+..|++ ...+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~----------------~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~k   84 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSL----------------VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIK   84 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhc----------------eeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-cccc
Confidence            4599999888877766655443211                1556788999999999999999999999999998 7889


Q ss_pred             CCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410          101 NNYGKTPLYMAAKGRYSEMVIELLETA  127 (161)
Q Consensus       101 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g  127 (161)
                      +..|++|||-|+..|+.+++..++.+-
T Consensus        85 N~~gWs~L~EAv~~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   85 NNEGWSPLHEAVSTGNEQIITEVLRHL  111 (560)
T ss_pred             ccccccHHHHHHHcCCHHHHHHHHHHh
Confidence            999999999999999998887777653

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.84  E-value=2.2e-08  Score=72.56  Aligned_cols=73  Identities=21%  Similarity=0.150  Sum_probs=64.7

Q ss_pred             cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      .-||.+++-|+.+..--|+..|++.....-..|.||||+|++.|+..-+++|+-+|+++...|.+|.||+.+|
T Consensus       135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~A  207 (669)
T KOG0818|consen  135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYA  207 (669)
T ss_pred             HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHH
Confidence            3588899999999877788899985445555799999999999999999999999999999999999999994

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.83  E-value=3.3e-08  Score=69.54  Aligned_cols=84  Identities=24%  Similarity=0.294  Sum_probs=75.2

Q ss_pred             cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHH
Q 037410           72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILL  151 (161)
Q Consensus        72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~  151 (161)
                      --|..||+.|..+.++.|++.|-. +|..|++..+||.+|+.-||..++++|+++|+-+..-...|..++.-+....+..
T Consensus        38 ~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaLnd~IR~  116 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGALNDRIRR  116 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhhhHHHHH
Confidence            357789999999999999998877 8999999999999999999999999999999999888889998887777777777


Q ss_pred             HHHhh
Q 037410          152 SLTRY  156 (161)
Q Consensus       152 ~l~~~  156 (161)
                      +|..|
T Consensus       117 mllsy  121 (516)
T KOG0511|consen  117 MLLSY  121 (516)
T ss_pred             HHHHH
Confidence            77655

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.69  E-value=3.2e-08  Score=72.12  Aligned_cols=68  Identities=26%  Similarity=0.451  Sum_probs=59.4

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      -...++.+|..|.||||.|+..|+.+.+..|+..|+++.                  .+|..|+++||.|+..|+.+++.
T Consensus        44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~------------------~kN~~gWs~L~EAv~~g~~q~i~  105 (560)
T KOG0522|consen   44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVS------------------IKNNEGWSPLHEAVSTGNEQIIT  105 (560)
T ss_pred             hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc------------------ccccccccHHHHHHHcCCHHHHH
Confidence            445788899999999999999999999999999998854                  48999999999999999998777


Q ss_pred             HHHHcC
Q 037410           88 ILTKQG   93 (161)
Q Consensus        88 ~L~~~g   93 (161)
                      .++...
T Consensus       106 ~vlr~~  111 (560)
T KOG0522|consen  106 EVLRHL  111 (560)
T ss_pred             HHHHHh
Confidence            766554

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.66  E-value=4.9e-08  Score=71.98  Aligned_cols=62  Identities=23%  Similarity=0.264  Sum_probs=57.0

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +.+|.|+||+||+.|++.+.++|+=+|.++..                  .|..|+|+|.||-+.|..||+.+|+.+|+.
T Consensus       658 ~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------------------rda~g~t~l~yar~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  658 EGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------------------RDAHGRTALFYARQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             CCCCcchhhhhhhhcchhHHHHHHHhCcccee------------------cccCCchhhhhHhhcccHHHHHHHHHcCCC
Confidence            55689999999999999999999988888554                  789999999999999999999999999986

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.63  E-value=1.8e-07  Score=60.02  Aligned_cols=69  Identities=22%  Similarity=0.141  Sum_probs=60.3

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHH
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKIL   89 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L   89 (161)
                      .++|.+|..|||+++.|+..|+.+.+.+|+++|...                 +...+..+.++.-+|-..|..+++..|
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~-----------------vgv~d~ssldaaqlaek~g~~~fvh~l   65 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAF-----------------VGVTDESSLDAAQLAEKGGAQAFVHSL   65 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCccc-----------------ccccccccchHHHHHHhcChHHHHHHH
Confidence            568899999999999999999999999999999331                 334688899999999999999999999


Q ss_pred             HHcCCC
Q 037410           90 TKQGPD   95 (161)
Q Consensus        90 ~~~g~~   95 (161)
                      .+..++
T Consensus        66 fe~~~e   71 (223)
T KOG2384|consen   66 FENDRE   71 (223)
T ss_pred             HHHhcc
Confidence            988665

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.62  E-value=7e-08  Score=69.70  Aligned_cols=90  Identities=19%  Similarity=0.097  Sum_probs=75.5

Q ss_pred             cCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhc-CCCCCCCCCcccchHHHHH
Q 037410           67 NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET-AHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        67 ~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~~~  145 (161)
                      ...+...+.+|+..|....++-+.-.|.+ .+.+|.+.+|+||.|+..|+.+++++|++. +.+++.+|..|+||++-|.
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~  581 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK  581 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence            44556688899999999999888888888 889999999999999999999999999996 6999999999999998653


Q ss_pred             ---hHHHHHHHHhhh
Q 037410          146 ---CTFILLSLTRYS  157 (161)
Q Consensus       146 ---~~~~~~~l~~~~  157 (161)
                         ....++.|.++.
T Consensus       582 ~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  582 HFKHKEVVKLLEEAQ  596 (622)
T ss_pred             hcCcHHHHHHHHHHh
Confidence               334555555543

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.58  E-value=2e-07  Score=65.77  Aligned_cols=75  Identities=24%  Similarity=0.149  Sum_probs=62.6

Q ss_pred             CcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccc
Q 037410           20 DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYS   99 (161)
Q Consensus        20 ~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~   99 (161)
                      +--|..||+.|..+.|++|++.|.++|.                  +|....+||.+|+..|+..++++|+++|+. +..
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~------------------vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~r   97 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNA------------------VDRFDSSPLYLASLCGHEDVVKLLLENGAI-CSR   97 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcch------------------hhcccccHHHHHHHcCcHHHHHHHHHcCCc-ccc
Confidence            5568999999999999999999988665                  889999999999999999999999999997 555


Q ss_pred             cCCCCCcHHHHHHhC
Q 037410          100 ANNYGKTPLYMAAKG  114 (161)
Q Consensus       100 ~~~~~~t~l~~A~~~  114 (161)
                      -...|..+ |+++.+
T Consensus        98 dtf~G~RC-~YgaLn  111 (516)
T KOG0511|consen   98 DTFDGDRC-HYGALN  111 (516)
T ss_pred             cccCcchh-hhhhhh
Confidence            45556655 444444

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.55  E-value=2e-07  Score=68.98  Aligned_cols=79  Identities=22%  Similarity=0.210  Sum_probs=70.6

Q ss_pred             hhcCCCccHHHHHHhcCcHHHHHHHHHcCCC-CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           65 MANNEKNTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        65 ~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~-~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      .++....+.||+|+.-|+-++++++++.|+. ..+..+..|.|+||-|+..++..++.+|++.|+.....|..|.||-.-
T Consensus       894 ~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~er  973 (1004)
T KOG0782|consen  894 IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQER  973 (1004)
T ss_pred             eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHH
Confidence            3566778999999999999999999999975 244567899999999999999999999999999999999999999765

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.50  E-value=2.2e-07  Score=72.40  Aligned_cols=83  Identities=30%  Similarity=0.448  Sum_probs=43.1

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPY   98 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~   98 (161)
                      |.|+||.|+..|..-++++|++.|++++.                  .+..|.+|+|.+...|+...+..++.+|++ .+
T Consensus       656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn~------------------~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~  716 (785)
T KOG0521|consen  656 GCSLLHVAVGTGDSGAVELLLQNGADVNA------------------LDSKGRTPLHHATASGHTSIACLLLKRGAD-PN  716 (785)
T ss_pred             ccchhhhhhccchHHHHHHHHhcCCcchh------------------hhccCCCcchhhhhhcccchhhhhcccccc-cc
Confidence            45555555555555555555555555332                  455555555555555555555555555554 44


Q ss_pred             ccCCCCCcHHHHHHhCCChHHH
Q 037410           99 SANNYGKTPLYMAAKGRYSEMV  120 (161)
Q Consensus        99 ~~~~~~~t~l~~A~~~~~~~~~  120 (161)
                      ..+..|.+|+.+|....+.+.+
T Consensus       717 a~~~~~~~~l~~a~~~~~~d~~  738 (785)
T KOG0521|consen  717 AFDPDGKLPLDIAMEAANADIV  738 (785)
T ss_pred             ccCccCcchhhHHhhhccccHH
Confidence            5555555555555444444433

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.49  E-value=1.7e-07  Score=73.05  Aligned_cols=78  Identities=22%  Similarity=0.236  Sum_probs=74.0

Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      +-..|.+++|.|+..+....+++|+++|++ ++..+..|++|+|.+...|+...+..|+++|++.+..+.+|.+|++++
T Consensus       652 ~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  652 VLCIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIA  729 (785)
T ss_pred             hhhcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHH
Confidence            345689999999999999999999999999 899999999999999999999999999999999999999999999986

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.42  E-value=8.4e-07  Score=68.24  Aligned_cols=101  Identities=23%  Similarity=0.219  Sum_probs=77.7

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHH
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKIL   89 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L   89 (161)
                      -++|..|.-|.++|+.|+..-+.+++++|+++...                         -..+|-+|+..|..++++++
T Consensus        53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~-------------------------~gdALL~aI~~~~v~~VE~l  107 (822)
T KOG3609|consen   53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSE-------------------------EGDALLLAIAVGSVPLVELL  107 (822)
T ss_pred             cchhccChHhhhceecccccccHHHHHHHhcCccc-------------------------cchHHHHHHHHHHHHHHHHH
Confidence            36777788899999999988889988888875322                         15577889999999999999


Q ss_pred             HHcCCCC---------ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC
Q 037410           90 TKQGPDN---------PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP  135 (161)
Q Consensus        90 ~~~g~~~---------~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~  135 (161)
                      +......         ....-..+.||+.+|+..++.||+++|+++|+.+...-.
T Consensus       108 l~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~  162 (822)
T KOG3609|consen  108 LVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHD  162 (822)
T ss_pred             HhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcc
Confidence            8774321         112334678999999999999999999999977654433

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.37  E-value=1.7e-06  Score=55.67  Aligned_cols=67  Identities=22%  Similarity=0.170  Sum_probs=60.5

Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      ++..|..|+|++++|+.-|..+.+.+|+.+|...+...|..+.+.+.+|-+.|+.+++..|.+.-.+
T Consensus         5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            5668999999999999999999999999999555888999999999999999999999999987433

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=98.30  E-value=7.4e-07  Score=69.85  Aligned_cols=98  Identities=14%  Similarity=0.050  Sum_probs=57.3

Q ss_pred             ccccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHH
Q 037410           12 LLNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILT   90 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~   90 (161)
                      .......|++-+|+++..++.-+++.+++. |.....                  .+..|...+|+|+. ++.++.-+++
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e------------------ld~d~qgV~hfca~-lg~ewA~ll~  627 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE------------------LDRDGQGVIHFCAA-LGYEWAFLPI  627 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchh------------------hcccCCChhhHhhh-cCCceeEEEE
Confidence            344556799999999999999999999986 443333                  23444444555333 2333332332


Q ss_pred             HcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCC
Q 037410           91 KQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAH  128 (161)
Q Consensus        91 ~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~  128 (161)
                      .-....++.+|..|+||||+|+.+|+..++..|.+-|+
T Consensus       628 ~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga  665 (975)
T KOG0520|consen  628 SADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGA  665 (975)
T ss_pred             eecccccccccCCCCcccchHhhcCHHHHHHHHHHhcc
Confidence            22222255566666666666666666666666665443

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.96  E-value=5e-06  Score=65.38  Aligned_cols=105  Identities=21%  Similarity=0.218  Sum_probs=73.9

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHH-hhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQ-TAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      .+++.....-..-|.+|...+|+|+..| .++.-+++. .|-.                  ++.+|..|+||||||+..|
T Consensus       592 ~~~e~~~~~~~eld~d~qgV~hfca~lg-~ewA~ll~~~~~~a------------------i~i~D~~G~tpL~wAa~~G  652 (975)
T KOG0520|consen  592 KVIEWAGSGDLELDRDGQGVIHFCAALG-YEWAFLPISADGVA------------------IDIRDRNGWTPLHWAAFRG  652 (975)
T ss_pred             HHhcccccCchhhcccCCChhhHhhhcC-CceeEEEEeecccc------------------cccccCCCCcccchHhhcC
Confidence            3444434455566778888888866555 444333332 2322                  5568999999999999999


Q ss_pred             cHHHHHHHHHcCCCCc-----cccCCCCCcHHHHHHhCCChHHHHHHHhc
Q 037410           82 NVHVVKILTKQGPDNP-----YSANNYGKTPLYMAAKGRYSEMVIELLET  126 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~-----~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~  126 (161)
                      +..++..|++.|++..     ......|.|+-.+|..+|+..+.-+|-+.
T Consensus       653 ~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  653 REKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            9999999998887632     22333688999999999998887776654

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.82  E-value=5.1e-05  Score=55.65  Aligned_cols=72  Identities=17%  Similarity=0.050  Sum_probs=54.9

Q ss_pred             HHHHHHHHHcCCCC-----ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHHH
Q 037410           83 VHVVKILTKQGPDN-----PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLT  154 (161)
Q Consensus        83 ~~~~~~L~~~g~~~-----~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l~  154 (161)
                      ...++.|.+.+.+.     +...+....|+||+|+..|..+++.+||+.|+|+..+|..|+||..++....+...+.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkdVk~~F~  480 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKDVKSIFI  480 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHHHHHHHH
Confidence            44566676665441     1234445789999999999999999999999999999999999999866555555444

>smart00248 ANK ankyrin repeats

Probab=97.70  E-value=5.2e-05  Score=33.01  Aligned_cols=27  Identities=33%  Similarity=0.570  Sum_probs=24.3

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHh
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKI   44 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~   44 (161)
                      .|.||+|+|+..++.++++.|++.+.+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            478999999999999999999998764

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=97.68  E-value=0.00011  Score=31.83  Aligned_cols=27  Identities=37%  Similarity=0.493  Sum_probs=17.1

Q ss_pred             CCcHHHHHHhCCChHHHHHHHhcCCCC
Q 037410          104 GKTPLYMAAKGRYSEMVIELLETAHQC  130 (161)
Q Consensus       104 ~~t~l~~A~~~~~~~~~~~Ll~~g~~~  130 (161)
                      +.||+++|+..++.++++.|++++.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            456666666666666666666666543

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.60  E-value=0.0001  Score=54.19  Aligned_cols=68  Identities=24%  Similarity=0.317  Sum_probs=51.6

Q ss_pred             HHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHH
Q 037410           32 SDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA  111 (161)
Q Consensus        32 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A  111 (161)
                      ...+++|.+++...|-+..            ....+.--.|+||+|+..|..+|+.++++.|++ +..+|..|.||+.++
T Consensus       404 p~~ie~lken~lsgnf~~~------------pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls  470 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVT------------PEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLS  470 (591)
T ss_pred             hhHHHHHHhcCCccccccc------------ccccccccchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCccccc
Confidence            4566777776655443211            111234467899999999999999999999988 889999999999998


Q ss_pred             H
Q 037410          112 A  112 (161)
Q Consensus       112 ~  112 (161)
                      .
T Consensus       471 ~  471 (591)
T KOG2505|consen  471 A  471 (591)
T ss_pred             c
Confidence            7

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.45  E-value=0.0007  Score=52.84  Aligned_cols=114  Identities=17%  Similarity=0.136  Sum_probs=88.5

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      .+.--+..|+.+|+...|+..++.... ..             -+.++.|.-|.++++.|..+.+.++.++|++..-. .
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~-~~-------------lninc~d~lGr~al~iai~nenle~~eLLl~~~~~-~   88 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAV-SK-------------LNINCRDPLGRLALHIAIDNENLELQELLLDTSSE-E   88 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccc-cc-------------cchhccChHhhhceecccccccHHHHHHHhcCccc-c
Confidence            355667889999999999999987654 11             23677899999999999999999999999977643 1


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCC----------CCCCCcccchHHHHHhHHHHHHH
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQC----------PMKAPTERQLCMLQQCTFILLSL  153 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~----------~~~~~~~~t~l~~~~~~~~~~~l  153 (161)
                             ..+|.+|+..|..++|++++++....          ...-..+-||+.+|......+.+
T Consensus        89 -------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil  147 (822)
T KOG3609|consen   89 -------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEIL  147 (822)
T ss_pred             -------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHH
Confidence                   44899999999999999999875332          23345678899998776654444

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=95.96  E-value=0.079  Score=35.74  Aligned_cols=98  Identities=16%  Similarity=0.161  Sum_probs=66.2

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHH--hcCcHHHHHHHHHcCCCC
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV--CHGNVHVVKILTKQGPDN   96 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~--~~~~~~~~~~L~~~g~~~   96 (161)
                      -.+++.+|...+..+++-+|+++-.-... +            ...  -..+..-+-++.  ...+..+++..+++|-.+
T Consensus       179 A~~Am~~si~~~K~dva~~lls~f~ft~~-d------------v~~--~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~  243 (284)
T PF06128_consen  179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQ-D------------VAS--MEKELYDIEYLLSEHSASYKVLEYFINRGLVD  243 (284)
T ss_pred             HHHHHHHHhcccHHHHHHHHHhhcceecc-h------------hhh--cCcchhhHHHHHhhcCCcHHHHHHHHhccccc
Confidence            45778888888888888888875221000 0            000  011222233333  344678999999999765


Q ss_pred             ccc---cCCCCCcHHHHHHhCCChHHHHHHHhcCCCCC
Q 037410           97 PYS---ANNYGKTPLYMAAKGRYSEMVIELLETAHQCP  131 (161)
Q Consensus        97 ~~~---~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~  131 (161)
                      ++.   +.+.|.|-|.=|++++..+++.+|+++|+-..
T Consensus       244 vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~~  281 (284)
T PF06128_consen  244 VNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAISG  281 (284)
T ss_pred             cchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcccc
Confidence            553   45689999999999999999999999998543

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=94.36  E-value=0.1  Score=28.88  Aligned_cols=47  Identities=26%  Similarity=0.296  Sum_probs=39.5

Q ss_pred             cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhc
Q 037410           72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET  126 (161)
Q Consensus        72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~  126 (161)
                      ..+..|..+|+.|+++.+++.+..        ...++..|+..-+.+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~~--------~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNKP--------DNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhcc--------HHHHHHHHHHHhhHHHHHHHHHh
Confidence            457889999999999999866532        25589999999999999999986

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=93.88  E-value=0.48  Score=31.00  Aligned_cols=38  Identities=24%  Similarity=0.135  Sum_probs=25.7

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQT   41 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~   41 (161)
                      +|++........-..+++-+..||+..+.++|+++-+.
T Consensus        61 ILqkyke~L~~~~~~~q~LFElAC~~qkydiV~WI~qn   98 (192)
T PF03158_consen   61 ILQKYKEDLENERYLNQELFELACEEQKYDIVKWIGQN   98 (192)
T ss_pred             HHHHHHHHhhcchhHHHHHHHHHHHHccccHHHHHhhc
Confidence            45555444432224577888889998899999988554

These proteins may be involved in promoting survival of infected macrophages [].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=93.51  E-value=0.29  Score=27.07  Aligned_cols=49  Identities=20%  Similarity=0.220  Sum_probs=39.9

Q ss_pred             CcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410           20 DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG   93 (161)
Q Consensus        20 ~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g   93 (161)
                      ...+..|+..|+.|+++.+++.+..                         ....+..|+...+.+++++|++..
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~~-------------------------~~~~l~~AI~~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNKP-------------------------DNDCLEYAIKSHNNEIADWLIENY   55 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhcc-------------------------HHHHHHHHHHHhhHHHHHHHHHhc
Confidence            3567999999999999999975421                         144688999999999999998764

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	161
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-08
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-07
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-07
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		2e-07
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-07
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		3e-07
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		5e-07
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-07
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		6e-07
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		9e-07
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		1e-06
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-06
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-06
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-06
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-06
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-06
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		2e-06
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		3e-06
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		5e-06
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		6e-06
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		9e-06
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		1e-05
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-05
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		5e-05
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		1e-04
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		1e-04
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-04
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-04
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		5e-04
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		5e-04
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		5e-04
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		6e-04
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		6e-04
1ycs_B	239	P53-53bp2 Complex Length = 239		7e-04
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		7e-04

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 23/127 (18%)
Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           +E+++L  S   + NAK   G TPL +AA+ GH ++V +L+                 GA
Sbjct: 50  KEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQ---------------GA 94
Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
           D       +++  T LH A  +G+  VVK+L  QG D P ++++ G+TPL + A+   +E
Sbjct: 95  D---PNAKDSDGKTPLHLAAENGHKEVVKLLLSQGAD-PNTSDSDGRTPLDL-AREHGNE 149
Query: 119 MVIELLE 125
            V++LLE
Sbjct: 150 EVVKLLE 156

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 22/128 (17%)
Query: 3   EILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
           E+++L      +VNAK   G TPL +AA+ GH ++V +L++                GAD
Sbjct: 16  EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA---------------GAD 60
Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
              +   +    T LH A  +G++ VVK+L + G D      N G+TPL++AA+  + E+
Sbjct: 61  ---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEV 116
Query: 120 VIELLETA 127
           V  LLE  
Sbjct: 117 VKLLLEAG 124

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 23/127 (18%)
Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           +EI++L  S   +VNAK   G TPL  AAK GH +IV +L+                 GA
Sbjct: 50  KEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISK---------------GA 94
Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
           D   +   +++  T LH A   G+  +VK+L  +G D   ++++ G+TPL + A+   +E
Sbjct: 95  D---VNAKDSDGRTPLHYAAKEGHKEIVKLLISKGAD-VNTSDSDGRTPLDL-AREHGNE 149
Query: 119 MVIELLE 125
            +++LLE
Sbjct: 150 EIVKLLE 156

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 22/115 (19%)
Query: 14  NVNAKGD---TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA+ D   TPL +AA  GH +IV VL++                GAD   +  A+   
Sbjct: 39  DVNAEDDSGKTPLHLAAIKGHLEIVEVLLKH---------------GAD---VNAADKMG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +T LH A  +G++ +V++L K G D   + + YG TPL++AA   + E+V  LL+
Sbjct: 81  DTPLHLAALYGHLEIVEVLLKNGAD-VNATDTYGFTPLHLAADAGHLEIVEVLLK 134

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 22/117 (18%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA+   G TPL +AA FGH +IV VL++                GAD   +   ++  
Sbjct: 39  DVNARDFTGWTPLHLAAHFGHLEIVEVLLKN---------------GAD---VNAKDSLG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
            T LH A   G++ +V++L K G D   +++++G TPL++AAK  + E+V  LL+  
Sbjct: 81  VTPLHLAARRGHLEIVEVLLKNGAD-VNASDSHGFTPLHLAAKRGHLEIVEVLLKNG 136

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 22/115 (19%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA+   GDTPL +AA+ GH +IV VL++                GAD   +  +    
Sbjct: 39  DVNAEDTYGDTPLHLAARVGHLEIVEVLLKN---------------GADVNALDFSG--- 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +T LH A   G++ +V++L K G D   + +  G TPL++AA   + E+V  LL+
Sbjct: 81  STPLHLAAKRGHLEIVEVLLKYGAD-VNADDTIGSTPLHLAADTGHLEIVEVLLK 134

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 19/110 (17%)
Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           +A G TPL +AA +GH +IV VL++                GAD   I +     +T LH
Sbjct: 44  DASGLTPLHLAATYGHLEIVEVLLKH---------------GADVNAIDIXG---STPLH 85
Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            A   G++ +V++L K G D   + + +G TPL++AA   + E+V  LL+
Sbjct: 86  LAALIGHLEIVEVLLKHGAD-VNAVDTWGDTPLHLAAIMGHLEIVEVLLK 134

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 23/127 (18%)
Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           +E+++L  S   +VNAK   G TPL  AA+ GH ++V +L+                 GA
Sbjct: 50  KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK---------------GA 94
Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
           D   +   +++  T LH A  +G+  VVK+L  +G D   ++++ G+TPL + A+   +E
Sbjct: 95  D---VNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDL-AREHGNE 149
Query: 119 MVIELLE 125
            V++LLE
Sbjct: 150 EVVKLLE 156

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 19/110 (17%)
Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           +A G TPL +AA +GH +IV VL++                GAD   I +     +T LH
Sbjct: 44  DASGLTPLHLAATYGHLEIVEVLLKH---------------GADVNAIDIMG---STPLH 85
Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            A   G++ +V++L K G D   + + +G TPL++AA   + E+V  LL+
Sbjct: 86  LAALIGHLEIVEVLLKHGAD-VNAVDTWGDTPLHLAAIMGHLEIVEVLLK 134

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 19/109 (17%)
Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G TPL +AA+ GH ++V +L++                GAD   +   +    T LH A 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEA---------------GAD---VNAKDKNGRTPLHLAA 43
Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
            +G++ VVK+L + G D      N G+TPL++AA+  + E+V  LLE  
Sbjct: 44  RNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAG 91

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 23/128 (17%)
Query: 3   EILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
           EI+E+      +VNAK   G TPL +AA+ GH +IV VL++                GAD
Sbjct: 49  EIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA---------------GAD 93
Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
              +   + +  T LH A   G++ +V++L K G D   + + +GKTP  +A +  + E 
Sbjct: 94  ---VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD-VNAQDKFGKTPFDLAIREGH-ED 148
Query: 120 VIELLETA 127
           + E+L+ A
Sbjct: 149 IAEVLQKA 156

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 24/116 (20%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +AAK GH +IV VL++                GAD   +   +N  
Sbjct: 39  DVNATDWLGHTPLHLAAKTGHLEIVEVLLK---------------YGAD---VNAWDNYG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNY-GKTPLYMAAKGRYSEMVIELLE 125
            T LH A  +G++ +V++L K G D   +A +Y G TPL++AA   + E+V  LL+
Sbjct: 81  ATPLHLAADNGHLEIVEVLLKHGAD--VNAKDYEGFTPLHLAAYDGHLEIVEVLLK 134

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 14  NVNA---KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA   +G TPL +AA  GH +IV VL++                GAD   +   + + 
Sbjct: 39  DVNAHDDQGSTPLHLAAWIGHPEIVEVLLKH---------------GAD---VNARDTDG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A  +G++ +V++L K G D N   A  YG TPL++AA   + E+V  LL+
Sbjct: 81  WTPLHLAADNGHLEIVEVLLKYGADVNAQDA--YGLTPLHLAADRGHLEIVEVLLK 134

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
Query: 18  KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA 77
           KG TPL VAAK+G   +  +L++        D  P +           A     T LH A
Sbjct: 145 KGFTPLHVAAKYGKVRVAELLLER-------DAHPNA-----------AGKNGLTPLHVA 186
Query: 78  VCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           V H N+ +VK+L  +G  +P+S    G TPL++AAK    E+   LL+
Sbjct: 187 VHHNNLDIVKLLLPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 23/127 (18%)
Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           +EI++L  S   + NAK   G TPL  AA+ GH +IV +L+                 GA
Sbjct: 50  KEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSK---------------GA 94
Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
           D       +++  T LH A  +G+  +VK+L  +G D P ++++ G+TPL + A+   +E
Sbjct: 95  DPNA---KDSDGRTPLHYAAENGHKEIVKLLLSKGAD-PNTSDSDGRTPLDL-AREHGNE 149
Query: 119 MVIELLE 125
            +++LLE
Sbjct: 150 EIVKLLE 156

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Query: 3   EILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
           EI+E+      +VNAK   G TPL +AA+ GH +IV VL++                GAD
Sbjct: 49  EIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA---------------GAD 93
Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
              +   + +  T LH A   G++ +V++L K G D   + + +GKTP  +A     +E 
Sbjct: 94  ---VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD-VNAQDKFGKTPFDLAID-NGNED 148
Query: 120 VIELLETA 127
           + E+L+ A
Sbjct: 149 IAEVLQKA 156

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 24/118 (20%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNAK   G TPL +AA+ GH +IV VL++                GAD   +   + + 
Sbjct: 39  DVNAKDKDGYTPLHLAAREGHLEIVEVLLKA---------------GAD---VNAKDKDG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
            T LH A   G++ +V++L K G D N    + Y  TPL++AA+  + E+V  LL+  
Sbjct: 81  YTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGY--TPLHLAAREGHLEIVEVLLKAG 136

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 14  NVNA---KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +AA  GH +IV VL++                GAD   +  ++   
Sbjct: 39  DVNATDNDGYTPLHLAASNGHLEIVEVLLKN---------------GAD---VNASDLTG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A   G++ +V++L K G D N Y  +N G TPL++AAK  + E+V  LL+
Sbjct: 81  ITPLHLAAATGHLEIVEVLLKHGADVNAY--DNDGHTPLHLAAKYGHLEIVEVLLK 134

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 24/116 (20%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +AA FGH +IV VL++        D   +  +G             
Sbjct: 39  DVNASDHVGWTPLHLAAYFGHLEIVEVLLKNG-----ADVNADDSLGV------------ 81
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNY-GKTPLYMAAKGRYSEMVIELLE 125
            T LH A   G++ VV++L K G D   +AN++ G TPL++AA   + E+V  LL+
Sbjct: 82  -TPLHLAADRGHLEVVEVLLKNGAD--VNANDHNGFTPLHLAANIGHLEIVEVLLK 134

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 5   LELCPSLLLN------VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           LE+   LL N      V+  G TPLR+AA FGH +IV VL++                GA
Sbjct: 60  LEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN---------------GA 104
Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
           D     M   E +T LH A   G++ +V++L K G D   + + +GKT   ++
Sbjct: 105 DVNANDM---EGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDIS 153

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 22/115 (19%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +AA  GH +IV VL++                GAD   +  ++   
Sbjct: 39  DVNAADNTGTTPLHLAAYSGHLEIVEVLLKH---------------GAD---VDASDVFG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A   G++ +V++L K G D   + ++ G TPL++AAK  Y E+V  LL+
Sbjct: 81  YTPLHLAAYWGHLEIVEVLLKNGAD-VNAMDSDGMTPLHLAAKWGYLEIVEVLLK 134

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G TPL +AA  GH +IV VL++                GAD   +   +    T LH A 
Sbjct: 35  GRTPLHMAAAVGHLEIVEVLLRN---------------GAD---VNAVDTNGTTPLHLAA 76
Query: 79  CHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             G++ +V++L K G D N   A   G TPLY+AA   + E+V  LL+
Sbjct: 77  SLGHLEIVEVLLKYGADVNAKDAT--GITPLYLAAYWGHLEIVEVLLK 122

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 22/115 (19%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +AA +GH +IV VL++                GAD   +   +   
Sbjct: 39  DVNAADVVGWTPLHLAAYWGHLEIVEVLLKN---------------GAD---VNAYDTLG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +T LH A   G++ +V++L K G D     +N G TPL++AA   + E+V  LL+
Sbjct: 81  STPLHLAAHFGHLEIVEVLLKNGADVNAKDDN-GITPLHLAANRGHLEIVEVLLK 134

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 22/101 (21%)
Query: 14  NVNA---KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA   KG+TPL +AA + H +IV VL++                GAD   +   +N+ 
Sbjct: 39  DVNANDRKGNTPLHLAADYDHLEIVEVLLKH---------------GAD---VNAHDNDG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
           +T LH A   G++ +V++L K G D   + + +GKT   ++
Sbjct: 81  STPLHLAALFGHLEIVEVLLKHGAD-VNAQDKFGKTAFDIS 120

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 25/89 (28%)
Query: 12  LLNVNAK-------GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIR 64
           LL+ NAK       G+TPL  A   GH ++V++L+Q      HG              I 
Sbjct: 138 LLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQ------HGAS------------IN 179
Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQG 93
            +NN+ NTALHEAV   +V VV++L   G
Sbjct: 180 ASNNKGNTALHEAVIEKHVFVVELLLLHG 208

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 18/125 (14%)
Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAK--IAQHGDGEPESGIGADR------------- 60
           +A+G T L +AAK GH ++V  L+   +  +    DG     I A               
Sbjct: 74  DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133
Query: 61  -QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK-GRYSE 118
              I + +NE+N  LH A   G V + +IL     D  ++ N +G +PL++AA+  RY  
Sbjct: 134 GSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDC 192
Query: 119 MVIEL 123
           +V+ L
Sbjct: 193 VVLFL 197

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
           V+  G TPL +AA  GH +IV VL++                GAD   +  A+    T L
Sbjct: 43  VDNTGLTPLHLAAVSGHLEIVEVLLKH---------------GAD---VDAADVYGFTPL 84
Query: 75  HEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           H A   G++ +V++L K G D N +     G TPL++AA   + E+V  LL+
Sbjct: 85  HLAAMTGHLEIVEVLLKYGADVNAFDMT--GSTPLHLAADEGHLEIVEVLLK 134

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 22/109 (20%)
Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G+TPL  AAK GH++ V  L+                 GAD   +   + + NT LH A 
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSK---------------GAD---VNARSKDGNTPLHLAA 50
Query: 79  CHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLET 126
            +G+  +VK+L  +G D N  S +  G TP ++A K  + E +++LL+ 
Sbjct: 51  KNGHAEIVKLLLAKGADVNARSKD--GNTPEHLAKKNGHHE-IVKLLDA 96

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 22/104 (21%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +V+AK   G  PL  A  +GH ++  +LV+      HG             ++ +A+  K
Sbjct: 71  DVHAKDKGGLVPLHNACSYGHYEVAELLVK------HG------------AVVNVADLWK 112
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKG 114
            T LHEA   G   + K+L + G D P   N  G TPL +   G
Sbjct: 113 FTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKDG 155

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 22/104 (21%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +V+AK   G  PL  A  +GH ++  +LV+      HG             ++ +A+  K
Sbjct: 67  DVHAKDKGGLVPLHNACSYGHYEVAELLVK------HG------------AVVNVADLWK 108
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKG 114
            T LHEA   G   + K+L + G D P   N  G TPL +   G
Sbjct: 109 FTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKDG 151

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 22/101 (21%)
Query: 14  NVNA---KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +AA+ GH +IV VL++                GAD   +   +N  
Sbjct: 39  DVNALDEDGLTPLHLAAQLGHLEIVEVLLKY---------------GAD---VNAEDNFG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
            T LH A   G++ +V++L K G D   + + +GKT   ++
Sbjct: 81  ITPLHLAAIRGHLEIVEVLLKHGAD-VNAQDKFGKTAFDIS 120

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 22/104 (21%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +V+AK   G  PL  A  +GH ++  +LV+      HG             ++ +A+  K
Sbjct: 69  DVHAKDKGGLVPLHNACSYGHYEVAELLVK------HG------------AVVNVADLWK 110
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKG 114
            T LHEA   G   + K+L + G D P   N  G TPL +   G
Sbjct: 111 FTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDLVKDG 153

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 24/116 (20%)
Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPL +    GH +I+ VL++ A               AD   +  ++   
Sbjct: 39  DVNANDWFGITPLHLVVNNGHLEIIEVLLKYA---------------AD---VNASDKSG 80
Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNY-GKTPLYMAAKGRYSEMVIELLE 125
            T LH A   G++ +V++L K G D   +A +Y G TPL++AA+  + E+V  LL+
Sbjct: 81  WTPLHLAAYRGHLEIVEVLLKYGAD--VNAMDYQGYTPLHLAAEDGHLEIVEVLLK 134

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           + N+E  TALH AVC G+  +VK L + G  N  +A++ G TPL+ AA
Sbjct: 65  LPNDEGITALHNAVCAGHTEIVKFLVQFGV-NVNAADSDGWTPLHCAA 111

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           + N+E  TALH AVC G+  +VK L + G  N  +A++ G TPL+ AA
Sbjct: 65  LPNDEGITALHNAVCAGHTEIVKFLVQFGV-NVNAADSDGWTPLHCAA 111

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	9e-21
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-20
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-12
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-20
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-18
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-11
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-10
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-20
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-19
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-17
3v30_A	172	DNA-binding protein rfxank; structural genomics co	6e-16
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-20
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-16
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-14
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	7e-10
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-09
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	5e-20
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-19
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-14
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-11
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-20
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-19
3hra_A	201	Ankyrin repeat family protein; structural protein;	9e-17
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-15
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-20
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-20
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-19
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-19
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-19
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-18
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-13
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-20
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-17
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-15
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-14
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-05
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	9e-20
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	6e-19
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-15
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-14
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	9e-20
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-19
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-19
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-18
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-12
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-19
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-16
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-16
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-14
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-19
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-17
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-14
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-19
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-18
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-17
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-15
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-15
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-13
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-11
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-19
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-19
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	8e-16
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-10
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-19
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-16
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-15
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-19
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-18
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-17
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-16
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-11
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-19
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-18
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-17
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-19
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-18
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-16
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-14
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-19
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-19
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-17
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-14
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-18
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-17
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-14
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-14
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-13
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-08
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-15
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-15
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-14
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-18
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-17
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-15
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-14
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-13
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-13
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-08
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-18
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	7e-17
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-13
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-12
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-18
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-18
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-17
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-15
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-10
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-17
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-15
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-09
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-04
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-18
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-18
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-16
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-09
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-18
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-17
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-15
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-13
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-09
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-18
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-12
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-18
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-15
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-18
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	8e-18
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-17
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-16
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-09
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-07
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-16
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-12
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-10
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-17
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-16
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-16
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-11
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-17
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-12
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-17
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-16
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-14
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-10
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-10
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	9e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-17
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-17
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-17
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-10
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-17
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-16
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-16
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-16
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-15
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-17
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-15
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-09
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-17
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-16
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-13
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	7e-13
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-11
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-16
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	8e-15
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-14
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-10
2rfa_A	232	Transient receptor potential cation channel subfa	4e-15
2rfa_A	232	Transient receptor potential cation channel subfa	1e-14
2rfa_A	232	Transient receptor potential cation channel subfa	4e-14
2rfa_A	232	Transient receptor potential cation channel subfa	3e-09
2rfa_A	232	Transient receptor potential cation channel subfa	5e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-14
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-04
2etb_A	256	Transient receptor potential cation channel subfam	2e-14
2etb_A	256	Transient receptor potential cation channel subfam	5e-14
2etb_A	256	Transient receptor potential cation channel subfam	3e-07
2etb_A	256	Transient receptor potential cation channel subfam	3e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-14
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	8e-12
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-08
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-08
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	4e-05
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-14
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-12
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-09
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	6e-08
2pnn_A	273	Transient receptor potential cation channel subfa	1e-13
2pnn_A	273	Transient receptor potential cation channel subfa	2e-13
2pnn_A	273	Transient receptor potential cation channel subfa	7e-13
2pnn_A	273	Transient receptor potential cation channel subfa	2e-10
2pnn_A	273	Transient receptor potential cation channel subfa	3e-08
2pnn_A	273	Transient receptor potential cation channel subfa	7e-05
2pnn_A	273	Transient receptor potential cation channel subfa	1e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	6e-13
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-12
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-12
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-09
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-08
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-07

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 82.4 bits (205), Expect = 9e-21
 Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            +N     G TPL  AA  G   +V  L+Q                GAD    ++    +
Sbjct: 28  VINHTDEEGFTPLMWAAAHGQIAVVEFLLQN---------------GAD---PQLLGKGR 69

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            +AL  A   G   +VK+L   G D     +  G TPL  A  G + + V  LLE
Sbjct: 70  ESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 80.1 bits (199), Expect = 7e-20
 Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +        ++ L +A   G++DIV +L+                 G D   +   +   
Sbjct: 61  DPQLLGKGRESALSLACSKGYTDIVKMLLD---------------CGVD---VNEYDWNG 102

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T L  AV   +V  VK+L + G D P    + G   + +A    Y  +   +  
Sbjct: 103 GTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIES 156

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 72.4 bits (179), Expect = 5e-17
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 19/107 (17%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
               +   A  G    ++  ++                      I   + E  T L  A 
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQ---------------ENV---INHTDEEGFTPLMWAA 44

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            HG + VV+ L + G D P       ++ L +A    Y+++V  LL+
Sbjct: 45  AHGQIAVVEFLLQNGAD-PQLLGKGRESALSLACSKGYTDIVKMLLD 90

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 59.7 bits (146), Expect = 4e-12
 Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 21/85 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN     G TPL  A    H   V +L++                GAD     +  +  
Sbjct: 94  DVNEYDWNGGTPLLYAVHGNHVKCVKMLLE---------------SGAD---PTIETDSG 135

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD 95
             ++  AV  G   V +++      
Sbjct: 136 YNSMDLAVALGYRSVQQVIESHLLK 160

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 81.3 bits (202), Expect = 1e-20
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 23/115 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + N K   G TPL  A   GH  +V +L+Q                 A    +     + 
Sbjct: 35  DPNVKDHAGWTPLHEACNHGHLKVVELLLQ---------------HKAL---VNTTGYQN 76

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           ++ LH+A  +G+V +VK+L   G     + N +G  P+          ++  L E
Sbjct: 77  DSPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLL-LLPE 129

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 74.8 bits (185), Expect = 3e-18
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 22/112 (19%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
             N +G+T L +A+  G    V  L+Q                G+D     + ++   T 
Sbjct: 5   FTNHRGETLLHIASIKGDIPSVEYLLQ---------------NGSD---PNVKDHAGWTP 46

Query: 74  LHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           LHEA  HG++ VV++L +     N  +      +PL+ AAK  + ++V +LL
Sbjct: 47  LHEACNHGHLKVVELLLQHKALVN--TTGYQNDSPLHDAAKNGHVDIV-KLL 95

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 56.7 bits (138), Expect = 3e-11
 Identities = 18/86 (20%), Positives = 26/86 (30%), Gaps = 21/86 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            VN      D+PL  AAK GH DIV +L+                 GA        N   
Sbjct: 68  LVNTTGYQNDSPLHDAAKNGHVDIVKLLLS---------------YGAS---RNAVNIFG 109

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDN 96
              +          ++ +  K    +
Sbjct: 110 LRPVDYTDDESMKSLLLLPEKNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 54.7 bits (133), Expect = 2e-10
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            N+   T LH A   G++  V+ L + G D P   ++ G TPL+ A    + ++V  LL+
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQ 64

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 81.3 bits (202), Expect = 3e-20
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + +      ++ L +A+  G++DIV +L++                  D   I + +   
Sbjct: 61  DPHILAKERESALSLASTGGYTDIVGLLLE---------------RDVD---INIYDWNG 102

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T L  AV   +V  V+ L  +G D   +  + G TP+ +A    Y ++   +  
Sbjct: 103 GTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIEN 156

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 79.8 bits (198), Expect = 1e-19
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 22/114 (19%)

Query: 15  VNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
           VN     G TPL  A+ FG  + V  L++                GAD     +   E+ 
Sbjct: 29  VNKPDERGFTPLIWASAFGEIETVRFLLE---------------WGAD---PHILAKERE 70

Query: 72  TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +AL  A   G   +V +L ++  D     +  G TPL  A +G + + V  LL 
Sbjct: 71  SALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLA 123

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 72.8 bits (180), Expect = 4e-17
 Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 18/107 (16%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
               +   A  G  D +   ++                G +   +   +    T L  A 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRK---------------GDNL--VNKPDERGFTPLIWAS 44

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             G +  V+ L + G D P+      ++ L +A+ G Y+++V  LLE
Sbjct: 45  AFGEIETVRFLLEWGAD-PHILAKERESALSLASTGGYTDIVGLLLE 90

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 69.8 bits (172), Expect = 6e-16
 Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 22/97 (22%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++N     G TPL  A +  H   V  L+                 GAD   +    +  
Sbjct: 94  DINIYDWNGGTPLLYAVRGNHVKCVEALLA---------------RGAD---LTTEADSG 135

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTP 107
            T +  AV  G   V +++        + +N     P
Sbjct: 136 YTPMDLAVALGYRKVQQVIENHILK-LFQSNLVPADP 171

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 80.5 bits (200), Expect = 5e-20
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 22/114 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N + K   G   +  AA+ G  D +  L++                 AD   + + +NE 
Sbjct: 62  NPDLKDRTGFAVIHDAARAGFLDTLQTLLE---------------FQAD---VNIEDNEG 103

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           N  LH A   G++ VV+ L K    N    N+ G T   +A     +E+V  L+
Sbjct: 104 NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV-SLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 70.1 bits (173), Expect = 4e-16
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 26/115 (22%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           NVNA+   G T L+V    G+ +I   L+        G         A+     + +   
Sbjct: 30  NVNAQNGFGRTALQVMK-LGNPEIARRLLL------RG---------AN---PDLKDRTG 70

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              +H+A   G +  ++ L +   D N    +N G  PL++AAK  +  +V E L
Sbjct: 71  FAVIHDAARAGFLDTLQTLLEFQADVN--IEDNEGNLPLHLAAKEGHLRVV-EFL 122

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 65.1 bits (160), Expect = 3e-14
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 21/107 (19%)

Query: 18  KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA 77
                L  AA  G  + ++ L+Q                  +   +   N    TAL   
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQ---------------NNVN---VNAQNGFGRTALQVM 45

Query: 78  VCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              GN  + + L  +G  NP   +  G   ++ AA+  + + + + L
Sbjct: 46  -KLGNPEIARRLLLRGA-NPDLKDRTGFAVIHDAARAGFLDTL-QTL 89

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 53.5 bits (130), Expect = 7e-10
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 20/83 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN +   G+ PL +AAK GH  +V  LV+      H          ++   +   N++ 
Sbjct: 95  DVNIEDNEGNLPLHLAAKEGHLRVVEFLVK------HT--------ASN---VGHRNHKG 137

Query: 71  NTALHEAVCHGNVHVVKILTKQG 93
           +TA   A  +G   VV ++   G
Sbjct: 138 DTACDLARLYGRNEVVSLMQANG 160

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 51.6 bits (125), Expect = 4e-09
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 6/61 (9%)

Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIEL 123
           MA       L  A   G++  +  L +   + N  + N +G+T L +   G   E+    
Sbjct: 1   MAEPW-GNELASAAARGDLEQLTSLLQNNVNVN--AQNGFGRTALQVMKLG-NPEIA-RR 55

Query: 124 L 124
           L
Sbjct: 56  L 56

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 80.6 bits (200), Expect = 5e-20
 Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 23/114 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            +N      DTPL +AA  GH DIV  L+Q      +          AD   I   N   
Sbjct: 64  RINVMNRGDDTPLHLAASHGHRDIVQKLLQ------YK---------AD---INAVNEHG 105

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           N  LH A   G   V + L   G       N YG+ P+  A       +  E  
Sbjct: 106 NVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLR-ERA 157

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 78.6 bits (195), Expect = 3e-19
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++N     G +PL  A + G S +V +L+                 GA    I + N   
Sbjct: 31  DLNQGDDHGFSPLHWACREGRSAVVEMLIMR---------------GAR---INVMNRGD 72

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +T LH A  HG+  +V+ L +   D   + N +G  PL+ A      ++  +L+ 
Sbjct: 73  DTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVA 126

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 66.7 bits (164), Expect = 1e-14
 Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 18/107 (16%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
               +    + G++  V + +       + + +   G           ++   + LH A 
Sbjct: 5   FMDDIFTQCREGNAVAVRLWL------DNTENDLNQG-----------DDHGFSPLHWAC 47

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             G   VV++L  +G       N    TPL++AA   + ++V +LL+
Sbjct: 48  REGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQ 93

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            + E    +      GN   V++      ++    +++G +PL+ A +   S +V E+L
Sbjct: 1   GSPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVV-EML 58

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 57.4 bits (140), Expect = 3e-11
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 29/106 (27%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++NA    G+ PL  A  +G   +   LV       +G         A    + + N   
Sbjct: 97  DINAVNEHGNVPLHYACFWGQDQVAEDLVA------NG---------AL---VSICNKYG 138

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA-KGR 115
              + +A       + +   K G       N   + P      KG 
Sbjct: 139 EMPVDKAKAPLRELLRERAEKMG------QNL-NRIPYKDTFWKGT 177

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 81.3 bits (202), Expect = 5e-20
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 24/118 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++N +    D+P   A   G ++I++ +++      H   +               N   
Sbjct: 64  DINLQNSISDSPYLYAGAQGRTEILAYMLK------HATPDLNK-----------HNRYG 106

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM----VIELL 124
             AL  A   G++  VK+L + G ++    N++G T L  A   R        +++LL
Sbjct: 107 GNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 80.6 bits (200), Expect = 1e-19
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 21/115 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            V+     G+TPL +A      +I   L+                 GAD   I + N+  
Sbjct: 31  QVDEVDTEGNTPLNIAVHNNDIEIAKALID---------------RGAD---INLQNSIS 72

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           ++    A   G   ++  + K    +    N YG   L  AA+  + + V  LLE
Sbjct: 73  DSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE 127

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 72.5 bits (179), Expect = 9e-17
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 34/135 (25%)

Query: 2   EEILELCPSLL----LNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPES 54
            EIL     +L     ++N     G   L  AA+ GH D V +L++       G      
Sbjct: 85  TEILAY---MLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE------DGR----- 130

Query: 55  GIGADRQMIRMANNEKNTALHEAVCHGNVH-----VVKILTKQGPDNPYSANNYGKTPLY 109
               D   I   N+   TAL EAV     +     +VK+L + G D     +N G+T + 
Sbjct: 131 ---ED---IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD-QSIKDNSGRTAMD 183

Query: 110 MAAKGRYSEMVIELL 124
            A +  Y+E+  ++L
Sbjct: 184 YANQKGYTEIS-KIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 68.6 bits (169), Expect = 3e-15
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 19/110 (17%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
             +    L  A +     +  +L                        +   + E NT L+
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQ---------------DTTYQ---VDEVDTEGNTPLN 44

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            AV + ++ + K L  +G D     N+   +P   A     +E++  +L+
Sbjct: 45  IAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGAQGRTEILAYMLK 93

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 55.1 bits (134), Expect = 3e-10
 Identities = 14/60 (23%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           M   E    L  A       V +IL           +  G TPL +A      E+  + L
Sbjct: 1   MKTYEVGALLEAANQRDTKKVKEILQDTTYQ-VDEVDTEGNTPLNIAVHNNDIEIA-KAL 58

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 84.1 bits (209), Expect = 7e-20
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 23/116 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            V+A    G TPL VA+ +G+  +V  L+Q                 AD   +       
Sbjct: 303 MVDATTRMGYTPLHVASHYGNIKLVKFLLQH---------------QAD---VNAKTKLG 344

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET 126
            + LH+A   G+  +V +L K G   P   ++ G TPL +A +  Y   V ++L+ 
Sbjct: 345 YSPLHQAAQQGHTDIVTLLLKNGAS-PNEVSSDGTTPLAIAKRLGYIS-VTDVLKV 398

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 83.7 bits (208), Expect = 8e-20
 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +       G TPL VAAK+G   +  +L++                 A       A    
Sbjct: 138 SQACMTKKGFTPLHVAAKYGKVRVAELLLER---------------DAH---PNAAGKNG 179

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH AV H N+ +VK+L  +G   P+S    G TPL++AAK    E+   LL+
Sbjct: 180 LTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQ 233

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 81.8 bits (203), Expect = 4e-19
 Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +       G TPL VA+  GH  IV  L+Q                GA      ++N + 
Sbjct: 6   SGGGGGESGLTPLHVASFMGHLPIVKNLLQR---------------GAS---PNVSNVKV 47

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A   G+  V K L +       +     +TPL+ AA+  ++ MV  LLE
Sbjct: 48  ETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLE 101

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 81.0 bits (201), Expect = 7e-19
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + NA+   G TPL +AA+ GH+++V++L+                  A+     + N   
Sbjct: 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSK---------------QAN---GNLGNKSG 278

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH     G+V V  +L K G     +    G TPL++A+     ++V  LL+
Sbjct: 279 LTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQ 332

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 81.0 bits (201), Expect = 7e-19
 Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 27/121 (22%)

Query: 11  LLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           LLL    + NA    G TPL VA    + DIV +L+                 G      
Sbjct: 164 LLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR---------------GGS---P 205

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
                   T LH A     V V + L + G     + +  G TPL++AA+  ++EMV  L
Sbjct: 206 HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMV-AL 263

Query: 124 L 124
           L
Sbjct: 264 L 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 79.5 bits (197), Expect = 3e-18
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            VNAK     TPL  AA+ GH+++V +L++                 A+     +A    
Sbjct: 72  KVNAKAKDDQTPLHCAARIGHTNMVKLLLE---------------NNAN---PNLATTAG 113

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +T LH A   G+V  V  L ++           G TPL++AAK     +   LLE
Sbjct: 114 HTPLHIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYGKVRVAELLLE 167

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.1 bits (157), Expect = 6e-13
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 23/100 (23%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNAK   G +PL  AA+ GH+DIV++L++                GA        +++ 
Sbjct: 336 DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN---------------GAS---PNEVSSDG 377

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD--NPYSANNYGKTPL 108
            T L  A   G + V  +L     +      ++ +  +  
Sbjct: 378 TTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFP 417

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
           G              T LH A   G++ +VK L ++G   P  +N   +TPL+MAA+  +
Sbjct: 4   GIS---GGGGGESGLTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGH 59

Query: 117 SEMVIELLE 125
           +E+   LL+
Sbjct: 60  TEVAKYLLQ 68

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 81.1 bits (201), Expect = 8e-20
 Identities = 29/126 (23%), Positives = 42/126 (33%), Gaps = 21/126 (16%)

Query: 3   EILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
             L  C    + VN     G T L  A   GH DIV +L       Q            +
Sbjct: 87  SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEML-----FTQPN---------IE 132

Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
              +   N   +TALH A   G   +V++L  +G       N   K    MA     + +
Sbjct: 133 ---LNQQNKLGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASL 188

Query: 120 VIELLE 125
           + +   
Sbjct: 189 LKKKQG 194

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 73.4 bits (181), Expect = 7e-17
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 19/122 (15%)

Query: 5   LELCPSLLLNVNAK-GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
             L PS  +   A+  D PL  AAK G+   +   +                       +
Sbjct: 58  TGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDN---------------RVG---V 99

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
              +   +TAL+ A   G+  +V++L  Q        N  G T L+ AA   Y+++V  L
Sbjct: 100 NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLL 159

Query: 124 LE 125
           L 
Sbjct: 160 LA 161

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 68.0 bits (167), Expect = 8e-15
 Identities = 21/103 (20%), Positives = 32/103 (31%), Gaps = 22/103 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            +N +   GDT L  AA  G++DIV +L+                 GA      + N EK
Sbjct: 132 ELNQQNKLGDTALHAAAWKGYADIVQLLLAK---------------GAR---TDLRNIEK 173

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK 113
             A   A       ++K            +N         +  
Sbjct: 174 KLAFDMATNAACASLLKKKQGTDAV-RTLSNAEDYLDDEDSDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 66.9 bits (164), Expect = 2e-14
 Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 28/114 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++       DT        G + ++                           +       
Sbjct: 37  DIIYITDMSDTNWWKGTSKGRTGLIPSN-----------------------YVAEQAESI 73

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           +  LHEA   GN+  ++             +  G T LY A  G + ++V E+L
Sbjct: 74  DNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIV-EML 125

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 15/107 (14%), Positives = 25/107 (23%), Gaps = 24/107 (22%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G   +  A           L       + GD             I    +  +T   +  
Sbjct: 12  GQVKVFRALYTFEPRTPDEL-----YIEEGD-------------IIYITDMSDTNWWKGT 53

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             G   ++                    PL+ AAK      + E L+
Sbjct: 54  SKGRTGLIPSN------YVAEQAESIDNPLHEAAKRGNLSWLRECLD 94

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 10/81 (12%), Positives = 20/81 (24%), Gaps = 25/81 (30%)

Query: 11  LLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           LLL      + +         +A     + ++                   G  A R + 
Sbjct: 158 LLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQ---------------GTDAVRTLS 202

Query: 64  RMANNEKNTALHEAVCHGNVH 84
              N E      ++    + H
Sbjct: 203 ---NAEDYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 3/58 (5%), Positives = 12/58 (20%), Gaps = 1/58 (1%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
                   +  A+          L  +   +     +   T  +       + ++   
Sbjct: 8   PVKPGQVKVFRALYTFEPRTPDELYIEE-GDIIYITDMSDTNWWKGTSKGRTGLIPSN 64

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 82.2 bits (204), Expect = 9e-20
 Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 17/115 (14%)

Query: 12  LLN-VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +   V   GDT L +A    H   +  L+                  A  + + + N+  
Sbjct: 1   VFGYVTEDGDTALHLAVIHQHEPFLDFLLGF---------------SAGHEYLDLQNDLG 45

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            TALH A   G    V+ L   G      A   G T L++A + R       LL+
Sbjct: 46  QTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHTALHLACRVRAHTCACVLLQ 99

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 79.9 bits (198), Expect = 6e-19
 Identities = 22/123 (17%), Positives = 39/123 (31%), Gaps = 27/123 (21%)

Query: 11  LLL----NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQM 62
           LL     ++N      G TPL +A +   + ++ +L++       G         AD   
Sbjct: 176 LLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK------AG---------AD--- 217

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE 122
                    T L  A+   N  + ++L   G            +P   +     S+   E
Sbjct: 218 PTARMYGGRTPLGSALLRPNPILARLLRAHGAP-EPEDGGDKLSPCSSSGSDSDSDNRDE 276

Query: 123 LLE 125
             E
Sbjct: 277 GDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 70.3 bits (173), Expect = 2e-15
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 43/153 (28%)

Query: 11  LLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQ----------TAKIAQHGDGEPE 53
            L      V      G T L +A +        VL+Q             + Q  D  P+
Sbjct: 63  KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 54  SGI----------------------GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK 91
           +                              +   N + +T LH AV H +  +V++L  
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQ---LEAENYDGHTPLHVAVIHKDAEMVRLLRD 179

Query: 92  QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            G D        G+TPL++A + + + ++ ELL
Sbjct: 180 AGADLNKPEPTCGRTPLHLAVEAQAASVL-ELL 211

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 66.4 bits (163), Expect = 5e-14
 Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 33/127 (25%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            ++ +   G T L +AA  G +  V  L         G         A    + +A    
Sbjct: 37  YLDLQNDLGQTALHLAAILGEASTVEKLYA------AG---------AG---VLVAERGG 78

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANN------------YGKTPLYMAAKGRYSE 118
           +TALH A          +L +  P +P  A++                P  + ++     
Sbjct: 79  HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN 138

Query: 119 MVIELLE 125
                 E
Sbjct: 139 EEEPRDE 145

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 81.3 bits (202), Expect = 9e-20
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 22/114 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N++       TPL  AA+  H + V  L++                GA    +   + E 
Sbjct: 36  NIDTCSEDQRTPLMEAAENNHLEAVKYLIK---------------AGAL---VDPKDAEG 77

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           +T LH A   G+  VV+ L   G  +    ++ G TP+  A + ++ ++V +LL
Sbjct: 78  STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV-KLL 130

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 79.8 bits (198), Expect = 4e-19
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 23/114 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N   +     +PL  AA+ GH DI  +LVQ                GA+   I   + ++
Sbjct: 3   NFKMEHQNKRSPLHAAAEAGHVDICHMLVQ---------------AGAN---IDTCSEDQ 44

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T L EA  + ++  VK L K G       +  G T L++AAK  + E+V + L
Sbjct: 45  RTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVV-QYL 96

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 79.0 bits (196), Expect = 8e-19
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN +   G TP+  A ++ H D+V +L+                 G+D   I + +NE+
Sbjct: 103 DVNCQDDGGWTPMIWATEYKHVDLVKLLLS---------------KGSD---INIRDNEE 144

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           N  LH A   G V + +IL     D  ++ N +G +PL++AA+    + V+  L 
Sbjct: 145 NICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLS 198

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 77.1 bits (191), Expect = 3e-18
 Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++N +    +  L  AA  G  DI  +L+                   D   +   N   
Sbjct: 136 DINIRDNEENICLHWAAFSGCVDIAEILLA---------------AKCD---LHAVNIHG 177

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           ++ LH A        V +   +  D     N  G+TPL  A+        +++ +
Sbjct: 178 DSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCASLNSQVWSALQMSK 231

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 60.9 bits (149), Expect = 3e-12
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 21/86 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +++A    GD+PL +AA+    D V + +                  +D   + + N E 
Sbjct: 169 DLHAVNIHGDSPLHIAARENRYDCVVLFLS---------------RDSD---VTLKNKEG 210

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDN 96
            T L  A  +  V     ++K   D+
Sbjct: 211 ETPLQCASLNSQVWSALQMSKALQDS 236

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 81.1 bits (201), Expect = 1e-19
 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 27/131 (20%)

Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
            E++      L  +N +     TPL +A      +I   L+        G          
Sbjct: 25  MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG------AG---------C 69

Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA-----NNYGKTPLYMAAK 113
           D     + +   NT LH A   G +  V +LT+        +     N  G T L++A+ 
Sbjct: 70  D---PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 126

Query: 114 GRYSEMVIELL 124
             Y  +V ELL
Sbjct: 127 HGYLGIV-ELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 72.2 bits (178), Expect = 3e-16
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 15/115 (13%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +   +   G+TPL +A + G    V VL Q                     +++  N   
Sbjct: 70  DPELRDFRGNTPLHLACEQGCLASVGVLTQ------SC------TTPHLHSILKATNYNG 117

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +T LH A  HG + +V++L   G D        G+T L++A   +  ++V  LL+
Sbjct: 118 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK 172

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 71.8 bits (177), Expect = 4e-16
 Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 33/126 (26%)

Query: 9   PSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRM 65
           P L   + A    G T L +A+  G+  IV +LV        G                 
Sbjct: 104 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS------LG----------------- 140

Query: 66  AN-NEKN-----TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
           A+ N +      TALH AV   N  +V +L K G D        G +P  +      + +
Sbjct: 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRI 199

Query: 120 VIELLE 125
             +L +
Sbjct: 200 QQQLGQ 205

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 15/111 (13%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
           +   GD+ L +A       +   +++                 A    +   NN + T L
Sbjct: 4   LTEDGDSFLHLAIIHEEKALTMEVIRQV-KGD----------LAF---LNFQNNLQQTPL 49

Query: 75  HEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           H AV      + + L   G D P   +  G TPL++A +      V  L +
Sbjct: 50  HLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLHLACEQGCLASVGVLTQ 99

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 60.6 bits (148), Expect = 5e-12
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 29/125 (23%)

Query: 3   EILELCPSLLL---NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
            I+EL   L+    +VNA+    G T L +A    + D+VS+L++       G       
Sbjct: 131 GIVEL---LVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK------CG------- 174

Query: 56  IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR 115
             AD   +     +  +         +  + + L +   +N        +       +  
Sbjct: 175 --AD---VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN-LQMLPESEDEESYDTESE 228

Query: 116 YSEMV 120
           ++E  
Sbjct: 229 FTEFT 233

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 78.2 bits (194), Expect = 1e-19
 Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 23/119 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNAK   G TPL +AA+ GH ++V +L++                GAD   +   +   
Sbjct: 27  DVNAKDKNGRTPLHLAARNGHLEVVKLLLE---------------AGAD---VNAKDKNG 68

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET-AH 128
            T LH A  +G++ VVK+L + G D   + +  G+TPL++AA+  + E+V  LLE  A+
Sbjct: 69  RTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 71.2 bits (176), Expect = 6e-17
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 22/107 (20%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G TPL +AA+ GH ++V +L++                GAD   +   +    T LH A 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLE---------------AGAD---VNAKDKNGRTPLHLAA 43

Query: 79  CHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            +G++ VVK+L + G D N  + +  G+TPL++AA+  + E+V +LL
Sbjct: 44  RNGHLEVVKLLLEAGADVN--AKDKNGRTPLHLAARNGHLEVV-KLL 87

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 77.6 bits (192), Expect = 2e-19
 Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 20/112 (17%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
           ++ +     L  AA+ G  D V +L+                 GAD   +   +   +T 
Sbjct: 19  HMGSDLGKKLLEAARAGQDDEVRILMA---------------NGAD---VAAKDKNGSTP 60

Query: 74  LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           LH A  +G++ VVK+L + G D   + + +GKT   ++      + + E+L+
Sbjct: 61  LHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDISIDNGNED-LAEILQ 110

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 63.0 bits (154), Expect = 7e-14
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 24/101 (23%)

Query: 26  AAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHV 85
            +   H    S LV                 G+         ++    L EA   G    
Sbjct: 1   GSSHHHHHHSSGLVP---------------RGSH------MGSDLGKKLLEAARAGQDDE 39

Query: 86  VKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           V+IL   G D    + +  G TPL++AA+  + E+V  LLE
Sbjct: 40  VRILMANGADVA--AKDKNGSTPLHLAARNGHLEVVKLLLE 78

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 19/116 (16%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +  AK    +TPL  A +F + + + +++ T                     +  AN + 
Sbjct: 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS----------SLR---LDYANKQG 211

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           N+ LH A+      V     + G D N    +N    PLY++ +     +  ELL+
Sbjct: 212 NSHLHWAILINWEDVAMRFVEMGIDVN--MEDNEHTVPLYLSVRAAMVLLTKELLQ 265

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 78.8 bits (195), Expect = 4e-18
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 24/116 (20%)

Query: 13  LNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
           LN           + VAA+ G +D V  L++T               G       + N  
Sbjct: 11  LNRIKSDDENMEKIHVAARKGQTDEVRRLIET---------------GVS---PTIQNRF 52

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             TALH A   G V   K L   G  +   +  +G+ P+++A     +++V+ L+E
Sbjct: 53  GCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMANKTDLVVALVE 105

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 77.6 bits (192), Expect = 1e-17
 Identities = 15/114 (13%), Positives = 32/114 (28%), Gaps = 10/114 (8%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN +      PL ++ +     +   L+Q  K             G     +       
Sbjct: 236 DVNMEDNEHTVPLYLSVRAAMVLLTKELLQ--KTDVFLIQACPYHNGTT---VLPDRVVW 290

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              +  A       V+++L ++  D    + N G        K     +   + 
Sbjct: 291 LDFVPAAADPSKQEVLQLLQEKL-DEVVRSLNTGAGGAVKRKKKAAPAVK-RMK 342

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 69.5 bits (171), Expect = 6e-15
 Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 34/126 (26%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            ++     G++ L  A      D+    V+               +G D   + M +NE 
Sbjct: 203 RLDYANKQGNSHLHWAILINWEDVAMRFVE---------------MGID---VNMEDNEH 244

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD------------NPYSANNYGKTPLYMAAKGRYSE 118
              L+ +V    V + K L ++                           +  AA     E
Sbjct: 245 TVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQE 304

Query: 119 MVIELL 124
           ++ +LL
Sbjct: 305 VL-QLL 309

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 69.1 bits (170), Expect = 9e-15
 Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 34/112 (30%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +   +   G T L +A KFG  D    L                 +G         ++  
Sbjct: 45  SPTIQNRFGCTALHLACKFGCVDTAKYLAS---------------VGEV-------HSLW 82

Query: 71  N--TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
           +    +H AV      +V  L +            G+ P  +  +    E+ 
Sbjct: 83  HGQKPIHLAVMANKTDLVVALVEGA-------KERGQMPESLLNECDEREVN 127

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 28/118 (23%)

Query: 11  LLLNVNAK-GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
            L+    + G  P  +  +    ++                     IG+  +     + +
Sbjct: 102 ALVEGAKERGQMPESLLNECDEREVN-------------------EIGSHVK-----HCK 137

Query: 70  KNTALHEAVCHGNVH--VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             TALH  V  G  +  ++KIL + G   P + +   +TPL  A + R  E +  +++
Sbjct: 138 GQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMD 194

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 6/99 (6%), Positives = 22/99 (22%), Gaps = 19/99 (19%)

Query: 13  LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNT 72
           L         +  AA     +++ +L +                  +   +  + N    
Sbjct: 284 LPDRVVWLDFVPAAADPSKQEVLQLLQE---------------KLDE---VVRSLNTGAG 325

Query: 73  ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA 111
              +        V ++          + +        ++
Sbjct: 326 GAVKRKKKAAPAVKRMKLAPSAP-VRTRSRSRARSSAVS 363

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 78.6 bits (195), Expect = 2e-19
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 24/114 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +V+AK   G  PL  A  +GH ++  +LV+      HG         A    + +A+  K
Sbjct: 67  DVHAKDKGGLVPLHNACSYGHYEVAELLVK------HG---------AV---VNVADLWK 108

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T LHEA   G   + K+L + G  +P   N  G TPL +   G  +++  +LL
Sbjct: 109 FTPLHEAAAKGKYEICKLLLQHGA-DPTKKNRDGNTPLDLVKDG-DTDIQ-DLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 77.8 bits (193), Expect = 5e-19
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 21/112 (18%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
             N++ D  L  AAK G  + V  L                    +    R     ++T 
Sbjct: 3   MGNSEADRQLLEAAKAGDVETVKKL-----CTVQ---------SVN---CRDIEGRQSTP 45

Query: 74  LHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           LH A  +  V VV+ L + G D +  + +  G  PL+ A    + E+  ELL
Sbjct: 46  LHFAAGYNRVSVVEYLLQHGADVH--AKDKGGLVPLHNACSYGHYEVA-ELL 94

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 69.3 bits (171), Expect = 8e-16
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N         TPL  AA +    +V  L+Q      HG         AD   +   +   
Sbjct: 34  NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ------HG---------AD---VHAKDKGG 75

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              LH A  +G+  V ++L K G   N   A+ +  TPL+ AA     E + +LL
Sbjct: 76  LVPLHNACSYGHYEVAELLVKHGAVVN--VADLWKFTPLHEAAAKGKYE-ICKLL 127

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 55.1 bits (134), Expect = 2e-10
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
           GA        N+E +  L EA   G+V  VK L      N         TPL+ AA    
Sbjct: 1   GAM------GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR 54

Query: 117 SEMVIELL 124
             +V E L
Sbjct: 55  VSVV-EYL 61

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 78.2 bits (194), Expect = 3e-19
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 25/116 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + +A+     TPL +AA  GH++IV VL++      HG         AD   +   +  K
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLK------HG---------AD---VNAKDMLK 100

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            TALH A  H +  VV++L K G D +  + + + KT   ++      ++  E+L+
Sbjct: 101 MTALHWATEHNHQEVVELLIKYGADVH--TQSKFCKTAFDISIDNGNEDLA-EILQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 71.3 bits (176), Expect = 1e-16
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 22/113 (19%)

Query: 14  NVNAK--GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
                  G +PL +AA++GH     VL+      +          G              
Sbjct: 27  PFTTDWLGTSPLHLAAQYGHFSTTEVLL------RA---------GVS---RDARTKVDR 68

Query: 72  TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           T LH A   G+ ++V++L K G  +  + +    T L+ A +  + E+V ELL
Sbjct: 69  TPLHMAASEGHANIVEVLLKHGA-DVNAKDMLKMTALHWATEHNHQEVV-ELL 119

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 66.6 bits (164), Expect = 7e-15
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 21/106 (19%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
               L  AA+ G  D V +L     +A           GA        +    + LH A 
Sbjct: 2   LGKKLLEAARAGQDDEVRIL-----MAN----------GAP---FT-TDWLGTSPLHLAA 42

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            +G+    ++L + G  +  +     +TPL+MAA   ++ +V E+L
Sbjct: 43  QYGHFSTTEVLLRAGV-SRDARTKVDRTPLHMAASEGHANIV-EVL 86

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 80.2 bits (199), Expect = 3e-19
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 21/115 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++          +  A ++G  +    LV+                G D   +R  + E 
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVE---------------AGYD---VRQPDKEN 42

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A  +  + +VK    +G        +   TPL+ A +  +  MV++L++
Sbjct: 43  VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMK 97

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 78.6 bits (195), Expect = 1e-18
 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 23/115 (20%)

Query: 14  NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
            V+        TPL  A + GH  +V  L++                GAD     + + E
Sbjct: 67  IVDQLGGDLNSTPLHWATRQGHLSMVVQLMK---------------YGAD---PSLIDGE 108

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
             + +H A   G+  +V  L  +G D     +  G TPL  AA   +S     LL
Sbjct: 109 GCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTHSVDPTRLL 162

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 75.9 bits (188), Expect = 1e-17
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 24/117 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHS-DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANN- 68
           +V+     G TPL  AA   HS D   +L+                       + + +  
Sbjct: 134 DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT---------------FNVS---VNLGDKY 175

Query: 69  EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            KNTALH AV  GN  V+ +L + G  N  + N  G++ L +A + +   M+  L E
Sbjct: 176 HKNTALHWAVLAGNTTVISLLLEAGA-NVDAQNIKGESALDLAKQRKNVWMINHLQE 231

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 72.9 bits (180), Expect = 1e-16
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 23/116 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI-RMANNE 69
           +V        T L  AA     D+V   +                 GA    + ++  + 
Sbjct: 34  DVRQPDKENVTLLHWAAINNRIDLVKYYIS---------------KGAI---VDQLGGDL 75

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            +T LH A   G++ +V  L K G D P   +  G + +++AA+  ++ +V  L+ 
Sbjct: 76  NSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIA 130

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 57.4 bits (140), Expect = 8e-11
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 22/87 (25%)

Query: 14  NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
           +VN       +T L  A   G++ ++S+L++                GA+   +   N +
Sbjct: 168 SVNLGDKYHKNTALHWAVLAGNTTVISLLLE---------------AGAN---VDAQNIK 209

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDN 96
             +AL  A    NV ++  L +     
Sbjct: 210 GESALDLAKQRKNVWMINHLQEARQAK 236

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 78.6 bits (195), Expect = 3e-19
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G TPLR+AA FGH +IV VL++                GAD   +   + E 
Sbjct: 72  DVNAVDHAGMTPLRLAALFGHLEIVEVLLK---------------NGAD---VNANDMEG 113

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           +T LH A   G++ +V++L K G D N  + + +GKT   ++      ++  E+L
Sbjct: 114 HTPLHLAAMFGHLEIVEVLLKNGADVN--AQDKFGKTAFDISIDNGNEDLA-EIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 75.5 bits (187), Expect = 4e-18
 Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA+   G TPL +AA  GH +IV VL++                GAD   +   ++  
Sbjct: 39  DVNAEDASGWTPLHLAAFNGHLEIVEVLLK---------------NGAD---VNAVDHAG 80

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T L  A   G++ +V++L K G D N  + +  G TPL++AA   + E ++E+L
Sbjct: 81  MTPLRLAALFGHLEIVEVLLKNGADVN--ANDMEGHTPLHLAAMFGHLE-IVEVL 132

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 72.8 bits (180), Expect = 5e-17
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 20/109 (18%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
            +     L  AA+ G  D V +L     +A           GAD   +   +    T LH
Sbjct: 11  GSDLGKKLLEAARAGRDDEVRIL-----MAN----------GAD---VNAEDASGWTPLH 52

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            A  +G++ +V++L K G D   + ++ G TPL +AA   + E+V E+L
Sbjct: 53  LAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFGHLEIV-EVL 99

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 79.0 bits (196), Expect = 6e-19
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 21/115 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++N     G T L +A      ++   L++      +G         A    +R+ +   
Sbjct: 99  DLNKITNQGVTCLHLAVGKKWFEVSQFLIE------NG---------AS---VRIKDKFN 140

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
              LH A   G++ ++++L   G       +  G TPL+ A    + +  + L+E
Sbjct: 141 QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 195

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 75.9 bits (188), Expect = 8e-18
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 20/115 (17%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            +  K   G  PL  +  F   +I S L+                   +  +    ++  
Sbjct: 28  LLLQKDQDGRIPLHWSVSFQAHEITSFLLS------KM---------ENVNLDDYPDDSG 72

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T  H A   GN+ VVK L  +    +     N G T L++A   ++ E+  + L
Sbjct: 73  WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS-QFL 126

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 72.9 bits (180), Expect = 1e-16
 Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 24/114 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +V  K      PL  AA  G   ++ +L         G         +    +   + + 
Sbjct: 132 SVRIKDKFNQIPLHRAASVGSLKLIELLCG------LGK--------SA---VNWQDKQG 174

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T L  A+  G+     +L ++        +N G     +A      E V +  
Sbjct: 175 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN----EQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 65.9 bits (162), Expect = 4e-14
 Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 19/109 (17%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
            + PL  A        V  L+     ++           +    +   + +    LH +V
Sbjct: 2   SNYPLHQACMENEFFKVQELL----HSK----------PSL---LLQKDQDGRIPLHWSV 44

Query: 79  CHGNVHVVKILTKQGPD--NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
                 +   L  +  +       ++ G TP ++A      E+V  L +
Sbjct: 45  SFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 76.7 bits (190), Expect = 6e-19
 Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 21/112 (18%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
           + +  D     A K G  D V   V                 G D   +          L
Sbjct: 3   LGSMCDKEFMWALKNGDLDEVKDYVA---------------KGED---VNRTLEGGRKPL 44

Query: 75  HEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           H A   G + +++ L  +G D N  + + +  TPL  A    +   V  LL 
Sbjct: 45  HYAADCGQLEILEFLLLKGADIN--APDKHHITPLLSAVYEGHVSCVKLLLS 94

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 75.9 bits (188), Expect = 1e-18
 Identities = 27/110 (24%), Positives = 37/110 (33%), Gaps = 22/110 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN     G  PL  AA  G  +I+  L+                 GAD   I   +   
Sbjct: 32  DVNRTLEGGRKPLHYAADCGQLEILEFLLL---------------KGAD---INAPDKHH 73

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
            T L  AV  G+V  VK+L  +G D        G T            ++
Sbjct: 74  ITPLLSAVYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDNQAIKALL 122

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 77.9 bits (193), Expect = 7e-19
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
           +V ++ +TP   AA+      +S L++                  D   +   +    TA
Sbjct: 39  DVVSEYETPWWTAARKADEQALSQLLE----------------DRD---VDAVDENGRTA 79

Query: 74  LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           L      G+   V++L + G D  +     G T L+MAA     E+V  L+E
Sbjct: 80  LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 74.8 bits (185), Expect = 1e-17
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 40/136 (29%)

Query: 2   EEILELCPSLLL---NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
           E+ L      LL   +V+A    G T L   A  G    V +L +       G       
Sbjct: 57  EQALSQ----LLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE------AG------- 99

Query: 56  IGADRQMIRMAN-NEKN-----TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLY 109
                     A+ + ++     TALH A  +    VV+ L + G D     +  G T L 
Sbjct: 100 ----------ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALE 148

Query: 110 MAAKGRYSEMVIELLE 125
           +A +   +      ++
Sbjct: 149 LAREILKTTPKGNPMQ 164

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 19/110 (17%), Positives = 30/110 (27%), Gaps = 24/110 (21%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
              +G     +  K GHS                       I AD        +E  T  
Sbjct: 10  TAGEGAMEYLIEWKDGHSPSWVPSS---------------YIAAD------VVSEYETPW 48

Query: 75  HEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
             A    +   +  L +    +  + +  G+T L   A     + V  LL
Sbjct: 49  WTAARKADEQALSQLLEDR--DVDAVDENGRTALLFVAGLGSDKCV-RLL 95

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 26/94 (27%)

Query: 11  LLL----NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQM 62
           LL     +++ +    G T L +AA +   ++V  LV+                GAD   
Sbjct: 94  LLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL---------------GAD--- 135

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDN 96
           I + +    TAL  A             + G   
Sbjct: 136 IEVEDERGLTALELAREILKTTPKGNPMQFGRRI 169

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 51.0 bits (123), Expect = 8e-09
 Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 4/62 (6%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
              E           G+       +    D      +  +TP + AA+    + + +LLE
Sbjct: 10  TAGEGAMEYLIEWKDGHSPSWVPSSYIAAD----VVSEYETPWWTAARKADEQALSQLLE 65

Query: 126 TA 127
             
Sbjct: 66  DR 67

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 80.2 bits (199), Expect = 1e-18
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +V+AK   G  PL  A  +GH ++  +L++      HG         A    +   +  +
Sbjct: 83  DVHAKDKGGLVPLHNACSYGHYEVTELLLK------HG---------AC---VNAMDLWQ 124

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LHEA     V V  +L   G D P   N +GK+ + MA      E +    +
Sbjct: 125 FTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPELRERLTYEFK 178

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 77.1 bits (191), Expect = 1e-17
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 27/115 (23%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           NVN K     TPL VAA+  H+D++ VL +      HG         A    +   ++  
Sbjct: 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHK------HG---------AK---MNALDSLG 280

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            TALH A   G++   ++L   G D P   +  G T   M       E V ++L 
Sbjct: 281 QTALHRAALAGHLQTCRLLLSYGSD-PSIISLQGFTAAQMGN-----EAVQQILS 329

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 68.7 bits (169), Expect = 1e-14
 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 22/115 (19%)

Query: 14  NVNAKGDTPLRVAAKFGHS---DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
                 +T L  A    H     +  +L++                GA+   +   N + 
Sbjct: 206 KQPQSHETALHCAVASLHPKRKQVAELLLR---------------KGAN---VNEKNKDF 247

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A    +  V+++L K G     + ++ G+T L+ AA   + +    LL 
Sbjct: 248 MTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLS 301

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 67.9 bits (167), Expect = 2e-14
 Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 26/116 (22%)

Query: 14  NVNAKGD---TPLRVAAKFGHSD-IVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
                G+     L  AA+ G+ + ++++L                 +  +      ++  
Sbjct: 16  KAVLTGEYKKDELLEAARSGNEEKLMALLTP---------------LNVN---CHASDGR 57

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           K+T LH A  +  V +V++L + G D +  + +  G  PL+ A    + E+  ELL
Sbjct: 58  KSTPLHLAAGYNRVRIVQLLLQHGADVH--AKDKGGLVPLHNACSYGHYEVT-ELL 110

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 28/143 (19%), Positives = 41/143 (28%), Gaps = 47/143 (32%)

Query: 11  LLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           LLL     VNA      TPL  AA     ++ S+L+       HG         AD    
Sbjct: 109 LLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLS------HG---------AD---P 150

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA--------------------NNY 103
            + N    +A+  A        +    K       +                        
Sbjct: 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210

Query: 104 GKTPLYMAAKGRY--SEMVIELL 124
            +T L+ A    +   + V ELL
Sbjct: 211 HETALHCAVASLHPKRKQVAELL 233

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNV-HVVKILTKQGPDNPYSANNYGKTPLYMAAKGR 115
            A      +    K   L EA   GN   ++ +LT     N ++++    TPL++AA   
Sbjct: 14  SAK---AVLTGEYKKDELLEAARSGNEEKLMALLTPLNV-NCHASDGRKSTPLHLAAGYN 69

Query: 116 YSEMVIELL 124
              +V +LL
Sbjct: 70  RVRIV-QLL 77

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 37.9 bits (89), Expect = 6e-04
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 21/85 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLV-------------QTAKIAQHGDGEPESGIG 57
            +NA    G T L  AA  GH     +L+              TA    +   +      
Sbjct: 272 KMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSES 331

Query: 58  ADRQMIRMANNEKNTALHEAVCHGN 82
                +R ++   +  L EA   G+
Sbjct: 332 TP---MRTSDV--DYRLLEASKAGD 351

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 78.4 bits (194), Expect = 1e-18
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 24/114 (21%)

Query: 14  NVNAK--GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
            V         L  ++  G  D+V  ++                   D     + N+E  
Sbjct: 30  RVKFNPLPLALLLDSSLEGEFDLVQRII---------------YEVDD---PSLPNDEGI 71

Query: 72  TALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           TALH AVC G+  +VK L + G + N  +A++ G TPL+ AA     ++  + L
Sbjct: 72  TALHNAVCAGHTEIVKFLVQFGVNVN--AADSDGWTPLHCAASCNNVQVC-KFL 122

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 21/106 (19%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G   L    +       S  +                 G     ++  N      L ++ 
Sbjct: 5   GQVSLPPGKRTNLRKTGSERI---------------AHGMR---VK-FNPLPLALLLDSS 45

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
             G   +V+ +  +  D P   N+ G T L+ A    ++E+V + L
Sbjct: 46  LEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIV-KFL 89

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 24/116 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + +     G T L  A   GH++IV  LVQ                G +   +  A+++ 
Sbjct: 62  DPSLPNDEGITALHNAVCAGHTEIVKFLVQ---------------FGVN---VNAADSDG 103

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSAN-NYGKTPLYMAAKGRYSEMVIELL 124
            T LH A    NV V K L + G      + +            +  Y++   + L
Sbjct: 104 WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS-QFL 158

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 20/111 (18%), Positives = 32/111 (28%), Gaps = 19/111 (17%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           NVNA    G TPL  AA   +  +   LV+                GA    +  ++ + 
Sbjct: 95  NVNAADSDGWTPLHCAASCNNVQVCKFLVE---------------SGAAVFAMTYSDMQT 139

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVI 121
                E +  G     + L           N      L+        E+ +
Sbjct: 140 AADKCEEMEEGYTQCSQFLYGVQEK-MGIMNKGVIYALWDYEPQNDDELPM 189

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 48.8 bits (117), Expect = 8e-08
 Identities = 5/55 (9%), Positives = 12/55 (21%), Gaps = 2/55 (3%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             +L                  G       N      L  ++     ++V  ++ 
Sbjct: 6   QVSLPPGKRTNLRKTGSERIAHGMRV--KFNPLPLALLLDSSLEGEFDLVQRIIY 58

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 79.5 bits (197), Expect = 1e-18
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++N     G T L  A    + D+V  LV+                GA+   I   +NE 
Sbjct: 65  DINYANVDGLTALHQACIDDNVDMVKFLVE---------------NGAN---INQPDNEG 106

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
              LH A   G + + + L  QG  +  + N+ G TPL +A +    E++   + 
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGA-HVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 75.6 bits (187), Expect = 3e-17
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N       G T L VAA  G+++++ +L+Q                  D   + + + + 
Sbjct: 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQ---------------ARYD---VNIKDYDG 232

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T LH A   G     +IL +    +  + N  G+T   +A +     +     +
Sbjct: 233 WTPLHAAAHWGKEEACRILVENLC-DMEAVNKVGQTAFDVADEDILGYLEELQKK 286

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 24/126 (19%)

Query: 2   EEILELCPSLLLNVNAKGD--TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
           E  LE           K D       A   G ++ V  L++                GAD
Sbjct: 21  ETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLE---------------RGAD 65

Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSE 118
              I  AN +  TALH+A    NV +VK L + G + N    +N G  PL+ AA   Y +
Sbjct: 66  ---INYANVDGLTALHQACIDDNVDMVKFLVENGANIN--QPDNEGWIPLHAAASCGYLD 120

Query: 119 MVIELL 124
           +  E L
Sbjct: 121 IA-EYL 125

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 68.7 bits (169), Expect = 1e-14
 Identities = 30/129 (23%), Positives = 45/129 (34%), Gaps = 26/129 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHG-DGEPESGIGADRQMIRMAN-- 67
           +V A    GDTPL +A +    +++        + + G D E          +       
Sbjct: 131 HVGAVNSEGDTPLDIAEEEAMEELLQNE-----VNRQGVDIEAARKEEERIMLRDARQWL 185

Query: 68  -------NEKN----TALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGR 115
                          TALH A   G   V+K+L +   D N    +  G TPL+ AA   
Sbjct: 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN--IKDYDGWTPLHAAAHWG 243

Query: 116 YSEMVIELL 124
             E    +L
Sbjct: 244 KEEAC-RIL 251

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 19/109 (17%), Positives = 31/109 (28%), Gaps = 21/109 (19%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           +AK     ++    G    +   V                     +       +      
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVK---------------RKKTK----VKFDDGAVFL 45

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            A   G+   V  L ++G D    AN  G T L+ A      +MV + L
Sbjct: 46  AACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMV-KFL 92

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 48/140 (34%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N+N     G  PL  AA  G+ DI   L+                 GA    +   N+E 
Sbjct: 98  NINQPDNEGWIPLHAAASCGYLDIAEYLIS---------------QGAH---VGAVNSEG 139

Query: 71  NTALHEAVCHGNVHVVKIL-TKQGPD-------------------------NPYSANNYG 104
           +T L  A       +++    +QG D                         N       G
Sbjct: 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG 199

Query: 105 KTPLYMAAKGRYSEMVIELL 124
            T L++AA   Y+E++ +LL
Sbjct: 200 GTALHVAAAKGYTEVL-KLL 218

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 21/86 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN K   G TPL  AA +G  +   +LV+                  D   +   N   
Sbjct: 224 DVNIKDYDGWTPLHAAAHWGKEEACRILVE---------------NLCD---MEAVNKVG 265

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDN 96
            TA   A      ++ ++  KQ   +
Sbjct: 266 QTAFDVADEDILGYLEELQKKQNLLH 291

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE 122
           ++MA+ ++          G+   ++    +         + G   L   + G   E V+ 
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTK-VKFDDGAVFLAACSSGDT-EEVLR 58

Query: 123 LLE 125
           LLE
Sbjct: 59  LLE 61

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 78.4 bits (194), Expect = 1e-18
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 19/112 (16%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
           +V ++ +TP   AA+      +S L++                  D   +   +    TA
Sbjct: 40  DVVSEYETPWWTAARKADEQALSQLLE----------------DRD---VDAVDENGRTA 80

Query: 74  LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           L      G+   V++L + G D  +     G T L+MAA     E+V  L+E
Sbjct: 81  LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 73.8 bits (182), Expect = 7e-17
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 40/136 (29%)

Query: 2   EEILELCPSLLL---NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
           E+ L      LL   +V+A    G T L   A  G    V +L +       G       
Sbjct: 58  EQALSQ----LLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE------AG------- 100

Query: 56  IGADRQMIRMAN-NEKN-----TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLY 109
                     A+ + ++     TALH A  +    VV+ L + G D     +  G T L 
Sbjct: 101 ----------ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALE 149

Query: 110 MAAKGRYSEMVIELLE 125
           +A +   +      ++
Sbjct: 150 LAREILKTTPKGNPMQ 165

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 19/110 (17%), Positives = 30/110 (27%), Gaps = 23/110 (20%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
             +G     +  K GHS                       I AD        +E  T   
Sbjct: 12  AGEGAMEYLIEWKDGHSPSWVPSS---------------YIAAD------VVSEYETPWW 50

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            A    +   +  L +    +  + +  G+T L   A     + V  L E
Sbjct: 51  TAARKADEQALSQLLEDR--DVDAVDENGRTALLFVAGLGSDKCVRLLAE 98

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 60.3 bits (147), Expect = 8e-12
 Identities = 18/131 (13%), Positives = 33/131 (25%), Gaps = 41/131 (31%)

Query: 2   EEILELCPSLLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPES 54
            E++E     L+    ++  +   G T L +A +   +      +Q              
Sbjct: 124 PEVVEA----LVELGADIEVEDERGLTALELAREILKTTPKGNPMQ-------------- 165

Query: 55  GIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKG 114
             G           EK   + E        V +I+ K            GK   Y+    
Sbjct: 166 -FGRR------IGLEKVINVLEGQVFEYAEVDEIVEK---------RGKGKDVEYLVRWK 209

Query: 115 RYSEMVIELLE 125
              +       
Sbjct: 210 DGGDCEWVKGV 220

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 4/62 (6%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
              E           G+       +    D      +  +TP + AA+    + + +LLE
Sbjct: 11  TAGEGAMEYLIEWKDGHSPSWVPSSYIAAD----VVSEYETPWWTAARKADEQALSQLLE 66

Query: 126 TA 127
             
Sbjct: 67  DR 68

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 78.3 bits (194), Expect = 1e-18
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 23/116 (19%)

Query: 14  NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
           +++A     G +PL  A +     +V +L+Q      HG         A+   +      
Sbjct: 141 DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ------HG---------AN---VNAQMYS 182

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            ++ALH A   G + +V+ L + G D     N +  TPL +A   R  +++     
Sbjct: 183 GSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDILRGKAT 237

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 76.7 bits (190), Expect = 5e-18
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 19/113 (16%)

Query: 15  VNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
                  GDTPL +A   G+   V  LV                 G +   + + NN + 
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLV-----------NLFQQGGRE---LDIYNNLRQ 47

Query: 72  TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           T LH AV      VV++L   G  +P + + +G+T  ++A + R    +   L
Sbjct: 48  TPLHLAVITTLPSVVRLLVTAGA-SPMALDRHGQTAAHLACEHRSPTCL-RAL 98

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 74.8 bits (185), Expect = 3e-17
 Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 25/117 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            ++       TPL +A       +V +LV        G         A        +   
Sbjct: 38  ELDIYNNLRQTPLHLAVITTLPSVVRLLVT------AG---------AS---PMALDRHG 79

Query: 71  NTALHEAVCHGNVHVVKILTKQG---PDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            TA H A  H +   ++ L         +  + N  G T L++A      E V +LL
Sbjct: 80  QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV-QLL 135

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 70.6 bits (174), Expect = 1e-15
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 18/114 (15%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +  A    G T   +A +      +  L+                       +   N + 
Sbjct: 71  SPMALDRHGQTAAHLACEHRSPTCLRALLD------SAAPGTLD--------LEARNYDG 116

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            TALH AV       V++L ++G D        G++PL  A +     MV +LL
Sbjct: 117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV-QLL 169

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 55.2 bits (134), Expect = 5e-10
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 21/83 (25%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           NVNA+   G + L  A+  G   +V  LV+       G         AD     + N   
Sbjct: 175 NVNAQMYSGSSALHSASGRGLLPLVRTLVR------SG---------AD---SSLKNCHN 216

Query: 71  NTALHEAVCHGNVHVVKILTKQG 93
           +T L  A     + +++    + 
Sbjct: 217 DTPLMVARSRRVIDILRGKATRP 239

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 77.8 bits (193), Expect = 2e-18
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 25/129 (19%)

Query: 4   ILELCPSLLLN----VNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGI 56
              +    +       N     G+T L +AA++  SD    L++                
Sbjct: 3   APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLE------AS-------- 48

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
            AD     + +N   T LH AV      V +IL +    +  +  + G TPL +AA+   
Sbjct: 49  -AD---ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV 104

Query: 117 SEMVIELLE 125
             M+ +L+ 
Sbjct: 105 EGMLEDLIN 113

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 75.9 bits (188), Expect = 7e-18
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 29/129 (22%)

Query: 2   EEILELCPSLLL---NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
           E +LE    L+    +VNA    G + L  AA   + D   VL++      +G       
Sbjct: 105 EGMLED---LINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK------NG------- 148

Query: 56  IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR 115
             A+     M NN + T L  A   G+    K+L      N    ++  + P  +A +  
Sbjct: 149 --AN---KDMQNNREETPLFLAAREGSYETAKVLLDHFA-NRDITDHMDRLPRDIAQERM 202

Query: 116 YSEMVIELL 124
           + ++V  LL
Sbjct: 203 HHDIV-RLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 75.1 bits (186), Expect = 1e-17
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 23/114 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +++A+   G TPL +AA+     ++  L+                  AD   +   ++  
Sbjct: 84  DLDARMHDGTTPLILAARLAVEGMLEDLIN------SH---------AD---VNAVDDLG 125

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            +ALH A    NV    +L K G  N    NN  +TPL++AA+    E   ++L
Sbjct: 126 KSALHWAAAVNNVDAAVVLLKNGA-NKDMQNNREETPLFLAAREGSYETA-KVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 69.4 bits (171), Expect = 2e-15
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 21/115 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + N +   G TPL  A       +  +L++      +   + ++             ++ 
Sbjct: 50  DANIQDNMGRTPLHAAVSADAQGVFQILIR------NRATDLDA-----------RMHDG 92

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T L  A       +++ L      +  + ++ GK+ L+ AA     +  + LL+
Sbjct: 93  TTPLILAARLAVEGMLEDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLK 146

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 52.8 bits (128), Expect = 3e-09
 Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 21/86 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N + +    +TPL +AA+ G  +   VL+       H          A+     + ++  
Sbjct: 150 NKDMQNNREETPLFLAAREGSYETAKVLLD------HF---------AN---RDITDHMD 191

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDN 96
                 A    +  +V++L +     
Sbjct: 192 RLPRDIAQERMHHDIVRLLDEYNLVR 217

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 38.5 bits (91), Expect = 3e-04
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 81  GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
               V+     QG       +  G+T L++AA+   S+   + L
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAA-KRL 44

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 75.9 bits (188), Expect = 2e-18
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 24/114 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + N +   G +P+  AA+ G  D + VLV+                GAD   + + +   
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEH---------------GAD---VNVPDGTG 101

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              +H AV  G+  VV  L  +   + +  +  G TPL +A +    ++V ++L
Sbjct: 102 ALPIHLAVQEGHTAVVSFLAAES--DLHRRDARGLTPLELALQRGAQDLV-DIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 75.9 bits (188), Expect = 2e-18
 Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 24/127 (18%)

Query: 1   MEEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIG 57
           ++E+  L    L++ +A    G T L+V   FG + I   L++       G         
Sbjct: 15  VQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLK------QG--------- 58

Query: 58  ADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYS 117
           A      + +    + +H+A   G +  +K+L + G D     +  G  P+++A +  ++
Sbjct: 59  AS---PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHT 114

Query: 118 EMVIELL 124
            +V   L
Sbjct: 115 AVV-SFL 120

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 70.5 bits (174), Expect = 2e-16
 Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 20/107 (18%)

Query: 18  KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEA 77
           +    L  AA  G    V  L     + +                    N    TAL   
Sbjct: 1   RAGDRLSGAAARGDVQEVRRL-----LHREL---------VH---PDALNRFGKTALQVM 43

Query: 78  VCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              G+  +   L KQG   P   +  G +P++ AA+  + + + ++L
Sbjct: 44  -MFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTL-KVL 87

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 22/82 (26%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN     G  P+ +A + GH+ +VS L                   +D   +   +   
Sbjct: 93  DVNVPDGTGALPIHLAVQEGHTAVVSFLAA----------------ESD---LHRRDARG 133

Query: 71  NTALHEAVCHGNVHVVKILTKQ 92
            T L  A+  G   +V IL   
Sbjct: 134 LTPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 52.4 bits (127), Expect = 2e-09
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
              L  A   G+V  V+ L  +   +P + N +GKT L +   G  + + +ELL+
Sbjct: 3   GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFG-STAIALELLK 56

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 77.9 bits (193), Expect = 3e-18
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 23/118 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA    G + L  AA   + D   VL++      +G         A+     M NN +
Sbjct: 149 DVNAVDDLGKSALHWAAAVNNVDAAVVLLK------NG---------AN---KDMQNNRE 190

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAH 128
            T L  A   G+    K+L      N    ++  + P  +A +  + ++V  LL+  H
Sbjct: 191 ETPLFLAAREGSYETAKVLLDHFA-NRDITDHMDRLPRDIAQERMHHDIV-RLLDLEH 246

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 75.6 bits (187), Expect = 2e-17
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 28/130 (21%)

Query: 3   EILELCPSLLLN----VNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
            ++      +       N     G+T L +AA++  SD    L++               
Sbjct: 37  AVISD---FIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLE------AS------- 80

Query: 56  IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR 115
             AD     + +N   T LH AV      V +IL +    +  +  + G TPL +AA+  
Sbjct: 81  --AD---ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 135

Query: 116 YSEMVIELLE 125
              M+ +L+ 
Sbjct: 136 VEGMLEDLIN 145

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 68.6 bits (169), Expect = 7e-15
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 21/115 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + N +   G TPL  A       +  +L++      +   + ++             ++ 
Sbjct: 82  DANIQDNMGRTPLHAAVSADAQGVFQILIR------NRATDLDAR-----------MHDG 124

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T L  A       +++ L     D   + ++ GK+ L+ AA     +  + LL+
Sbjct: 125 TTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLK 178

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 63.3 bits (155), Expect = 7e-13
 Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 35/128 (27%)

Query: 13  LNVNAK---GDTPLRVAAKFG-------------HSDIVSVLVQTAKIAQHGDGEPESGI 56
           ++VN +   G TPL +A+  G                ++S       I Q          
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDF-----IYQ---------- 45

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
           GA        +    TALH A  +      K L +    +    +N G+TPL+ A     
Sbjct: 46  GASLHNQT--DRTGETALHLAARYSRSDAAKRLLEASA-DANIQDNMGRTPLHAAVSADA 102

Query: 117 SEMVIELL 124
             +  ++L
Sbjct: 103 QGVF-QIL 109

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 53.2 bits (129), Expect = 2e-09
 Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 21/86 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N + +    +TPL +AA+ G  +   VL+       H          A+     + ++  
Sbjct: 182 NKDMQNNREETPLFLAAREGSYETAKVLLD------HF---------AN---RDITDHMD 223

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDN 96
                 A    +  +V++L  +   +
Sbjct: 224 RLPRDIAQERMHHDIVRLLDLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 47.8 bits (115), Expect = 2e-07
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 13/72 (18%)

Query: 67  NNEKNTALHEAVCHGNVH-------------VVKILTKQGPDNPYSANNYGKTPLYMAAK 113
             +  T L  A C G                V+     QG       +  G+T L++AA+
Sbjct: 7   GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR 66

Query: 114 GRYSEMVIELLE 125
              S+    LLE
Sbjct: 67  YSRSDAAKRLLE 78

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 73.9 bits (183), Expect = 3e-18
 Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 20/111 (18%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G TPL +AA+ GH ++V +L++                GAD   +   +    T LH A 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLE---------------AGAD---VNAKDKNGRTPLHLAA 43

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET-AH 128
            +G++ VVK+L + G D   + +  G+TPL++AA+  + E+V  LLE  A+
Sbjct: 44  RNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 58.5 bits (143), Expect = 3e-12
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 21/83 (25%)

Query: 14 NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
          +VNAK   G TPL +AA+ GH ++V +L++                GAD   +   +   
Sbjct: 27 DVNAKDKNGRTPLHLAARNGHLEVVKLLLE---------------AGAD---VNAKDKNG 68

Query: 71 NTALHEAVCHGNVHVVKILTKQG 93
           T LH A  +G++ VVK+L + G
Sbjct: 69 RTPLHLAARNGHLEVVKLLLEAG 91

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 74.7 bits (185), Expect = 4e-18
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNAK   G TPL +A   GH +IV VL++      +G         AD   +   +   
Sbjct: 39  DVNAKDEYGLTPLYLATAHGHLEIVEVLLK------NG---------AD---VNAVDAIG 80

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T LH A   G++ + ++L K G D N  + + +GKT   ++      ++  E+L
Sbjct: 81  FTPLHLAAFIGHLEIAEVLLKHGADVN--AQDKFGKTAFDISIGNGNEDLA-EIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 67.4 bits (166), Expect = 2e-15
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 22/114 (19%)

Query: 12  LLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
             +  +     L  AA+ G  D V +L     +A           GAD   +   +    
Sbjct: 7   HHHHGSDLGKKLLEAARAGQDDEVRIL-----MAN----------GAD---VNAKDEYGL 48

Query: 72  TALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           T L+ A  HG++ +V++L K G D N  + +  G TPL++AA   + E+  E+L
Sbjct: 49  TPLYLATAHGHLEIVEVLLKNGADVN--AVDAIGFTPLHLAAFIGHLEIA-EVL 99

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 73.6 bits (182), Expect = 1e-17
 Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 24/116 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + NA    G  P++V    G + +  +L+                 GA+      A+   
Sbjct: 37  DPNALNRFGRRPIQVMMM-GSAQVAELLLLH---------------GAE---PNCADPAT 77

Query: 71  NT-ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T  +H+A   G +  + +L + G       + +G+ P+ +A +  + ++   L  
Sbjct: 78  LTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHA 132

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 69.8 bits (172), Expect = 3e-16
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 24/116 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            ++      D  L  AA  G  + V  L++                GAD       N   
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLE---------------AGAD---PNALNRFG 45

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKT-PLYMAAKGRYSEMVIELLE 125
              +      G+  V ++L   G + P  A+    T P++ AA+  + + ++ L  
Sbjct: 46  RRPIQVM-MMGSAQVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHR 99

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 60.5 bits (148), Expect = 1e-12
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
                 I M     +  L  A   G V  V+ L + G D P + N +G+ P+ +   G  
Sbjct: 2   SPG---IHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMMG-S 56

Query: 117 SEMVIELL 124
           +++  ELL
Sbjct: 57  AQVA-ELL 63

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 55.1 bits (134), Expect = 1e-10
 Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 26/93 (27%)

Query: 11  LLL----NVNAK---GDT-PLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQM 62
           LLL      N       T P+  AA+ G  D + VL +                GA    
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHR---------------AGAR--- 103

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPD 95
           + + +      +  A   G+  + + L     D
Sbjct: 104 LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 74.7 bits (185), Expect = 1e-17
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           NVN K   G TPL  +  FG+S++   L++                GA+   +   N E 
Sbjct: 93  NVNTKDFSGKTPLMWSIIFGYSEMSYFLLE---------------HGAN---VNDRNLEG 134

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T L  A  +G   +VK L + G D +  + +  G T    A      E++ ++ 
Sbjct: 135 ETPLIVASKYGRSEIVKKLLELGADIS--ARDLTGLTAEASARIFGRQEVI-KIF 186

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 71.7 bits (177), Expect = 2e-16
 Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            +  K   G T L  A K     I   L+                 G++   +   +   
Sbjct: 60  KLEDKDIEGSTALIWAVKNNRLGIAEKLLS---------------KGSN---VNTKDFSG 101

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            T L  ++  G   +   L + G + N    N  G+TPL +A+K   SE+V + L
Sbjct: 102 KTPLMWSIIFGYSEMSYFLLEHGANVN--DRNLEGETPLIVASKYGRSEIV-KKL 153

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 70.5 bits (174), Expect = 5e-16
 Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 23/115 (20%)

Query: 13  LNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
              N +     TPL VA   G  + +  LV                       +   + E
Sbjct: 26  FLRNYRDSYNRTPLMVACMLGMENAIDKLV---------------ENFDK---LEDKDIE 67

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            +TAL  AV +  + + + L  +G  N  + +  GKTPL  +    YSEM    L
Sbjct: 68  GSTALIWAVKNNRLGIAEKLLSKGS-NVNTKDFSGKTPLMWSIIFGYSEMS-YFL 120

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.8 bits (141), Expect = 3e-11
 Identities = 14/112 (12%), Positives = 30/112 (26%), Gaps = 28/112 (25%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
           +++  G+   ++  +   +  +  L                            ++   T 
Sbjct: 3   HMDKNGEIVEKIKDEKSINQNLDFL------------------------RNYRDSYNRTP 38

Query: 74  LHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           L  A   G  + +  L +          +  G T L  A K     +  E L
Sbjct: 39  LMVACMLGMENAIDKLVENFDKLE--DKDIEGSTALIWAVKNNRLGIA-EKL 87

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 72.8 bits (180), Expect = 1e-17
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 23/113 (20%)

Query: 14  NVNAK-GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNT 72
              +K G+TPL  AAK GH++ V  L+                 GAD   +   + + NT
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLS---------------KGAD---VNARSKDGNT 44

Query: 73  ALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            LH A  +G+  +VK+L  +G D N  + +  G TP ++A K  + E +++LL
Sbjct: 45  PLHLAAKNGHAEIVKLLLAKGADVN--ARSKDGNTPEHLAKKNGHHE-IVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 70.9 bits (175), Expect = 7e-17
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 22/99 (22%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VNA+   G+TPL +AAK GH++IV +L+                 GAD   +   + + 
Sbjct: 34  DVNARSKDGNTPLHLAAKNGHAEIVKLLLA---------------KGAD---VNARSKDG 75

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLY 109
           NT  H A  +G+  +VK+L  +G D   + +       +
Sbjct: 76  NTPEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHHH 113

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 57.8 bits (141), Expect = 8e-12
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
           G         + + NT LH A  +G+   VK L  +G D   + +  G TPL++AAK  +
Sbjct: 1   GHM-----WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGH 54

Query: 117 SEMVIELL 124
           +E+V +LL
Sbjct: 55  AEIV-KLL 61

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 76.4 bits (189), Expect = 1e-17
 Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 28/123 (22%)

Query: 11  LLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           +LL    + +     G+T L  A   G+   V + V+                      +
Sbjct: 80  ILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVK---------------KNWR---L 121

Query: 64  RMANNE-KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE 122
                    T+ + AV   +V +V     + P           + +++  K  + +M+I 
Sbjct: 122 MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMIL 179

Query: 123 LLE 125
           LL+
Sbjct: 180 LLD 182

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 73.7 bits (182), Expect = 1e-16
 Identities = 23/117 (19%), Positives = 35/117 (29%), Gaps = 31/117 (26%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NE 69
           +       G +    A    +  +V  L+        G                 A  N 
Sbjct: 23  DTFKADVHGHSASYYAIADNNVRLVCTLLN------AG-----------------ALKNL 59

Query: 70  KN--TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
                 LH+A    +  +VKIL   G D     ++ G T LY A      + V +L 
Sbjct: 60  LENEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTV-KLF 114

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 68.3 bits (168), Expect = 1e-14
 Identities = 15/121 (12%), Positives = 33/121 (27%), Gaps = 33/121 (27%)

Query: 14  NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
            +         T    A       IVS  +                           +  
Sbjct: 120 RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS------EI-----------------PSTF 156

Query: 70  KN----TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTP-LYMAAKGRYSEMVIELL 124
                 + +H  + +G+V ++ +L         + N+    P + +A   +  EM+  L 
Sbjct: 157 DLAILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALF 215

Query: 125 E 125
           +
Sbjct: 216 K 216

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 12/122 (9%), Positives = 35/122 (28%), Gaps = 33/122 (27%)

Query: 11  LLLNVNA------KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIR 64
             L+            + + +  K GH D++ +L+                         
Sbjct: 147 YFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLD---------------YMTS---TN 188

Query: 65  MANNEKNT-ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
             N+      +  A+ + ++ +++ L K   +          +          +E+   +
Sbjct: 189 TNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN--------IYSANLENVLLDDAEIAKMI 240

Query: 124 LE 125
           +E
Sbjct: 241 IE 242

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 55.2 bits (134), Expect = 7e-10
 Identities = 11/112 (9%), Positives = 32/112 (28%), Gaps = 32/112 (28%)

Query: 14  NVNAK---GDTP-LRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE 69
           + N        P +++A      +++  L +      +                   N  
Sbjct: 186 STNTNNSLLFIPDIKLAIDNKDIEMLQALFK------YD-----------------IN-- 220

Query: 70  KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVI 121
             +A  E V   +  + K++ ++      S +      +      +  E++ 
Sbjct: 221 IYSANLENVLLDDAEIAKMIIEKHV-EYKSDSYTKDLDI--VKNNKLDEIIS 269

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 56  IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNY-GKTPLYMAAKG 114
              D      A+   ++A + A+   NV +V  L   G       N    + PL+ AA  
Sbjct: 20  SSKD---TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL----KNLLENEFPLHQAATL 72

Query: 115 RYSEMVIELL 124
             +++V ++L
Sbjct: 73  EDTKIV-KIL 81

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 25/115 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N++ K     TPL +A +      V  L+++               GAD   +     + 
Sbjct: 182 NIDHKISHLGTPLYLACENQQRACVKKLLES---------------GAD---VNQGKGQD 223

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            + LH  V   +  +  +L   G D   + N  GK P+ +      S +    LE
Sbjct: 224 -SPLHAVVRTASEELACLLMDFGAD-TQAKNAEGKRPVELVP--PESPLAQLFLE 274

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 27/122 (22%)

Query: 11  LLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI 63
           +LL     VN       TPL  A   G  D V++L+Q      HG         A  Q  
Sbjct: 110 ILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQ------HG---------ASVQ-- 152

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
               ++  + +HEA   G+V  V  L   G  N     ++  TPLY+A + +    V +L
Sbjct: 153 --PESDLASPIHEAARRGHVECVNSLIAYGG-NIDHKISHLGTPLYLACENQQRACVKKL 209

Query: 124 LE 125
           LE
Sbjct: 210 LE 211

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 75.2 bits (186), Expect = 4e-17
 Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 21/113 (18%)

Query: 13  LNVNAK-GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
           L  +A    +P+  AA  GH   +  L     I+Q          G     + +   +  
Sbjct: 52  LMGDAVSDWSPMHEAAIHGHQLSLRNL-----ISQ----------GWA---VNIITADHV 93

Query: 72  TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           + LHEA   G++  VKIL K G            TPL+ A      + V  LL
Sbjct: 94  SPLHEACLGGHLSCVKILLKHGA-QVNGVTADWHTPLFNACVSGSWDCV-NLL 144

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 56.7 bits (138), Expect = 2e-10
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 17/114 (14%)

Query: 25  VAAKFGHSDIVSVLVQT-AKI-AQHGDGEPESG----IGADRQMIRM----ANNEKN--- 71
           + +   H    S LV   + + +  G      G       D   IR+       +     
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW 60

Query: 72  TALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           + +HEA  HG+   ++ L  QG   N         +PL+ A  G +   V ++L
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGHLSCV-KIL 111

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 21/84 (25%)

Query: 14  NVNAK--GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
           +VN     D+PL    +    ++  +L+                 GAD    +  N E  
Sbjct: 215 DVNQGKGQDSPLHAVVRTASEELACLLMDF---------------GAD---TQAKNAEGK 256

Query: 72  TALHEAVCHGNVHVVKILTKQGPD 95
             +        +     L ++G  
Sbjct: 257 RPVELVPPESPL-AQLFLEREGAS 279

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 75.6 bits (187), Expect = 2e-17
 Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 27/127 (21%)

Query: 5   LELCPSLLL---NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIG 57
           ++L   LL    NVN +    G TPL  A +    DIV +L++      HG         
Sbjct: 18  VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR------HG--------- 62

Query: 58  ADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYS 117
           AD     +      T    A   G+V ++K+   +G D     + YG T    AA     
Sbjct: 63  AD---PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKV 118

Query: 118 EMVIELL 124
           + + + L
Sbjct: 119 KAL-KFL 124

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 21/110 (19%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE-KNTAL 74
             + +  L  A +    D+V  L++                GA+   +     E   T L
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLE---------------GGAN---VNFQEEEGGWTPL 43

Query: 75  HEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           H AV      +V++L + G D P      G TP  +AA     +++ +L 
Sbjct: 44  HNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGSVKLL-KLF 91

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 72.1 bits (178), Expect = 6e-16
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 24/133 (18%)

Query: 3   EILELCPSLLL----NVNAK---GDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPES 54
           ++L+L     L    +VN     G T    AA +G    +  L +  A +          
Sbjct: 86  KLLKL----FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK----- 136

Query: 55  GIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKG 114
                ++          TAL +A   G+V V+KIL  +   +  + +N G+  L  A   
Sbjct: 137 ----TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192

Query: 115 ---RYSEMVIELL 124
                 E +  LL
Sbjct: 193 SDDSDVEAITHLL 205

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 72.1 bits (178), Expect = 6e-16
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 26/118 (22%)

Query: 14  NVNAK---GDTPLRVAAKFGHSD----IVSVLVQTAKIAQHGDGEPESGIGADRQMIRMA 66
           +VNA    G   L  A           I  +L+                 GAD   + + 
Sbjct: 174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLD---------------HGAD---VNVR 215

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
                T L  AV   ++ +V+ L +Q        ++ GKT L +A + +  ++  ELL
Sbjct: 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA-ELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 71.0 bits (175), Expect = 1e-15
 Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 43/145 (29%)

Query: 2   EEILELCPSLLL----NVNAK-------------GDTPLRVAAKFGHSDIVSVLVQTAKI 44
            + L+     L     NVN +             G T L  AA+ GH +++ +L+     
Sbjct: 118 VKALKF----LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL----- 168

Query: 45  AQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV----HVVKILTKQGPDNPYSA 100
                      +GAD   +   +N    AL  A+   +      +  +L   G D     
Sbjct: 169 ---------DEMGAD---VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVR 215

Query: 101 NNYGKTPLYMAAKGRYSEMVIELLE 125
              GKTPL +A + ++  +V  LLE
Sbjct: 216 GERGKTPLILAVEKKHLGLVQRLLE 240

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 26/100 (26%)

Query: 2   EEILELCPSLLL---NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
           E I  L   LL    +VN +   G TPL +A +  H  +V  L     + Q         
Sbjct: 199 EAITHL---LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL-----LEQEH------- 243

Query: 56  IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD 95
              +   I   +++  TAL  AV      + ++L K+G  
Sbjct: 244 --IE---INDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 55.6 bits (135), Expect = 5e-10
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           A  E N  L +AV + +V +V+ L + G +  +     G TPL+ A +    ++V ELL
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIV-ELL 58

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 74.6 bits (184), Expect = 2e-17
 Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 27/119 (22%)

Query: 14  NVNAK------GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN 67
           +              L  AA  G  ++V   V+                  D       N
Sbjct: 10  SPRKARRARLNPLVLLLDAALTGELEVVQQAVKE---------------MND---PSQPN 51

Query: 68  NEKNTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            E  TALH A+C  N  +V  L   G + N  S +++G TPL+ AA    + + + L++
Sbjct: 52  EEGITALHNAICGANYSIVDFLITAGANVN--SPDSHGWTPLHCAASCNDTVICMALVQ 108

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 68.1 bits (167), Expect = 7e-15
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 23/117 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + +     G T L  A    +  IV  L+                 GA+   +   ++  
Sbjct: 46  DPSQPNEEGITALHNAICGANYSIVDFLIT---------------AGAN---VNSPDSHG 87

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGR--YSEMVIELLE 125
            T LH A    +  +   L + G     +  + G T        R  Y++    L +
Sbjct: 88  WTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLAD 144

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 54.6 bits (132), Expect = 7e-10
 Identities = 13/117 (11%), Positives = 28/117 (23%), Gaps = 26/117 (22%)

Query: 14  NVNAK----GDTPLRVAAKF--GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN 67
            + A     G T       +  G++D  + L                 +      + + N
Sbjct: 112 AIFATTLSDGATAFEKCDPYREGYADCATYLA---------------DVEQS---MGLMN 153

Query: 68  NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           +    AL +         +     +        +   +T  + AA       V    
Sbjct: 154 SGAVYALWDY-SAEFGDELSFREGESV-TVLRRDGPEETDWWWAALHGQEGYVPRNY 208

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
               +  R A       L +A   G + VV+   K+  D P   N  G T L+ A  G  
Sbjct: 8   AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGAN 66

Query: 117 SEMVIELL 124
             +V + L
Sbjct: 67  YSIV-DFL 73

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 76.1 bits (188), Expect = 4e-17
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 5   LELCPSLL---LNVNAK--GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
             +   +    +N+       T L   A    ++    L+         + +     GAD
Sbjct: 106 YAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVH-------EAKECIAAGAD 158

Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
              +   + ++NT L  AV      +V  L K G D P   N   ++ L+ AA  R   M
Sbjct: 159 ---VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGM 214

Query: 120 VIELL 124
           +   +
Sbjct: 215 M-VYM 218

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 19/122 (15%)

Query: 3   EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQM 62
           ++     +   +   KG T L  AA+  +  IV  LV                 G++   
Sbjct: 263 KVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV--------------GEKGSN--- 305

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE 122
               + +  T +  A   G + VV  L +QG  +  + +    T   +A    +  +V +
Sbjct: 306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA-SVEAVDATDHTARQLAQANNHHNIV-D 363

Query: 123 LL 124
           + 
Sbjct: 364 IF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 29/124 (23%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +         + L  AA      ++  ++ + K            +  D   I   +   
Sbjct: 191 DPTIYNKSERSALHQAAANRDFGMMVYMLNSTK------------LKGD---IEELDRNG 235

Query: 71  NTALHEAVCHGN---VHVVKILTKQGPD-------NPYSANNYGKTPLYMAAKGRYSEMV 120
            TAL     +     V   K+L ++G            S    G+T L+ AA+     +V
Sbjct: 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIV 295

Query: 121 IELL 124
            + L
Sbjct: 296 -KYL 298

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 70.8 bits (174), Expect = 3e-15
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 19/118 (16%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSV----LVQTAKIAQHGDGEPESGIGADRQMIRMA 66
           ++      G T L + A     D V+     + + AK+   G    +S            
Sbjct: 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE----------- 275

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
             +  TALH A    N+ +VK L  +   N    +  GKTP+ +AA+    E+V   L
Sbjct: 276 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV-MYL 332

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 66.5 bits (163), Expect = 1e-13
 Identities = 13/114 (11%), Positives = 28/114 (24%), Gaps = 24/114 (21%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
             N        P       G+  +                                  E 
Sbjct: 53  QRNELQHYSLYPNPQGYGNGNDFLGDFNHT---------------NLQI---PTEPEPES 94

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
              LH     G+  + + +T++  +       + +T L+  A    +E   +L+
Sbjct: 95  PIKLHTE-AAGSYAITEPITRESVN--IIDPRHNRTVLHWIASNSSAEKSEDLI 145

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 63.8 bits (156), Expect = 7e-13
 Identities = 18/133 (13%), Positives = 33/133 (24%), Gaps = 31/133 (23%)

Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           + + +   + L             L   A  G   I   + +                  
Sbjct: 74  DFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITR---------------ESV 117

Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA-------NNYGKTPLYMA 111
           +   I +      T LH    + +    + L         +A       +    TPL +A
Sbjct: 118 N---I-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA 173

Query: 112 AKGRYSEMVIELL 124
              R   +V   L
Sbjct: 174 VLARRRRLV-AYL 185

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 58.4 bits (142), Expect = 5e-11
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 21/85 (24%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N + +   G TP+ +AA+ G  ++V  L+Q                GA    +   +   
Sbjct: 305 NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ---------------QGAS---VEAVDATD 346

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD 95
           +TA   A  + + ++V I  +  P+
Sbjct: 347 HTARQLAQANNHHNIVDIFDRCRPE 371

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 71.0 bits (175), Expect = 2e-16
 Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 24/116 (20%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           N NA    G  P++V    G + +  +L+                 GA+      A+   
Sbjct: 37  NPNAPNSYGRRPIQVMMM-GSARVAELLLL---------------HGAE---PNCADPAT 77

Query: 71  NT-ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            T  +H+A   G +  + +L + G       + +G+ P+ +A +  + ++   L  
Sbjct: 78  LTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA 132

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 66.7 bits (164), Expect = 8e-15
 Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 32/118 (27%)

Query: 11  LLL----NVNAKGD----TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQM 62
           LLL      N         P+  AA+ G  D + VL +                GA    
Sbjct: 62  LLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHR---------------AGAR--- 103

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
           + + +      +  A   G+  V + L              G     + A    S++ 
Sbjct: 104 LDVRDAWGRLPVDLAEELGHRDVARYLRAAA------GGTRGSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 22/114 (19%)

Query: 14  NVNAK-GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNT 72
             + +     L  AA  G  + V  L++                GA+       N+    
Sbjct: 6   GSSMEPSADWLATAAARGRVEEVRALLE---------------AGAN---PNAPNSYGRR 47

Query: 73  ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKT-PLYMAAKGRYSEMVIELLE 125
            +      G+  V ++L   G + P  A+    T P++ AA+  + + ++ L  
Sbjct: 48  PIQVM-MMGSARVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHR 99

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 55.6 bits (135), Expect = 1e-10
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 53  ESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
           E   G+               L  A   G V  V+ L + G + P + N+YG+ P+ +  
Sbjct: 2   EPAAGSS-------MEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM 53

Query: 113 KGRYSEMVIELL 124
            G     V ELL
Sbjct: 54  MGSAR--VAELL 63

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 68.8 bits (169), Expect = 4e-15
 Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 43/146 (29%)

Query: 1   MEEILELCPSLLL---NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPES 54
           ++ + +L   L      V+ +   G+T L +AA + + +   VL++              
Sbjct: 16  VQALSKL---LKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLME------AA------ 60

Query: 55  GIGADRQMIRMANNEKN----TALHEAVCHGNVHVVKILTKQGPD------------NPY 98
               +  ++      +     TALH AV + NV++V+ L  +G               P+
Sbjct: 61  ---PE--LVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115

Query: 99  SANNYGKTPLYMAAKGRYSEMVIELL 124
           +   YG+ PL  AA     E+V  LL
Sbjct: 116 NLIYYGEHPLSFAACVGSEEIV-RLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 22/110 (20%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
            ++PL +AAK      +S L+      +          G +   +        TALH A 
Sbjct: 3   WESPLLLAAKENDVQALSKLL----KFE----------GCE---VHQRGAMGETALHIAA 45

Query: 79  CHGNVHVVKILTKQGPD----NPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            + N+    +L +  P+       S    G+T L++A   +   +V   L
Sbjct: 46  LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLV-RAL 94

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 66.1 bits (162), Expect = 4e-14
 Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 43/137 (31%)

Query: 14  NVNAK----------------GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIG 57
           +V+A+                G+ PL  AA  G  +IV +L++      HG         
Sbjct: 100 SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE------HG--------- 144

Query: 58  ADRQMIRMANNEKNTALHEAVCHGN----VHVVKILTKQGPD-----NPYSANNYGKTPL 108
           AD   IR  ++  NT LH  +   N      +  +L                NN G TP 
Sbjct: 145 AD---IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPF 201

Query: 109 YMAAKGRYSEMVIELLE 125
            +A       M   L++
Sbjct: 202 KLAGVEGNIVMFQHLMQ 218

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 72  TALHEAVCHGNVHVV-KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           + L  A    +V  + K+L  +G    +     G+T L++AA     E  + L+E
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGC-EVHQRGAMGETALHIAALYDNLEAAMVLME 58

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 66.2 bits (162), Expect = 2e-14
 Identities = 15/122 (12%), Positives = 36/122 (29%), Gaps = 23/122 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++ ++   G T      + G +DI           + G         AD   I       
Sbjct: 67  DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG---------AD---ITALYKPY 114

Query: 71  NTALHEAVCHGNVHVVK-------ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
              + + + +  V   +       I ++ G       + +G T L    + +    +  +
Sbjct: 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMM 173

Query: 124 LE 125
            +
Sbjct: 174 ED 175

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 8/85 (9%), Positives = 19/85 (22%), Gaps = 14/85 (16%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           ++ A        +         D   ++     I            G     + + +   
Sbjct: 106 DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS--------GLQ---LLIKDKWG 154

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD 95
            TAL           +K++      
Sbjct: 155 LTALEFVKRCQKPIALKMMEDYIKK 179

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 20/135 (14%), Positives = 36/135 (26%), Gaps = 36/135 (26%)

Query: 16  NAKGD-TPLRVAAKFGHSDIVSVLVQ----------------TAKIAQHGDGEPESGI-- 56
           NA  +   +  AA  G  +    L +                     ++ + E    I  
Sbjct: 2   NAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDV--LRNNNDEARYKISM 59

Query: 57  -----GADRQMIRMANNEKNTALHEAVCHGN------VHVVKILTKQGPDNPYSANNYGK 105
                GAD   I+    E  T        G         + KI  ++G D   +     K
Sbjct: 60  FLINKGAD---IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYK 115

Query: 106 TPLYMAAKGRYSEMV 120
             ++      + +  
Sbjct: 116 IVVFKNIFNYFVDEN 130

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 7/61 (11%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 69  EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA----AKGRYSEMVIELL 124
            +   +  A   G       L ++G ++    +      LY            ++ + L+
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLI 62

Query: 125 E 125
            
Sbjct: 63  N 63

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 67.5 bits (165), Expect = 2e-14
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 22/129 (17%)

Query: 16  NAKGDTPLRVAA---KFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNT 72
            + G T L  A    + G +  +  L+Q  K +    G P+  + A          + ++
Sbjct: 40  GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDS----GNPKPLVNAQ---CTDEFYQGHS 92

Query: 73  ALHEAVCHGNVHVVKILTKQGPD------------NPYSANNYGKTPLYMAAKGRYSEMV 120
           ALH A+   ++  VK+L + G D            +  +   +G+ PL +AA  +  ++V
Sbjct: 93  ALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV 152

Query: 121 IELLETAHQ 129
             LLE  HQ
Sbjct: 153 TYLLENPHQ 161

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 66.4 bits (162), Expect = 5e-14
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 16/115 (13%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG--------IGADRQMIRMANNEK 70
           G+ PL +AA     D+V+ L++        +     G        + AD       N+ +
Sbjct: 136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIAD-------NSPE 188

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           N+AL   +  G + +   L          +N+ G TPL +AAK    E+   +L+
Sbjct: 189 NSALVIHMYDGLLQMGARLCPTVQL-EEISNHQGLTPLKLAAKEGKIEIFRHILQ 242

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 19/90 (21%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           N+  ++ L +    G   + + L  T                       ++N++  T L 
Sbjct: 185 NSPENSALVIHMYDGLLQMGARLCPT---------------VQL---EEISNHQGLTPLK 226

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGK 105
            A   G + + + + ++   +  +A+++  
Sbjct: 227 LAAKEGKIEIFRHILQREF-SGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 10/69 (14%)

Query: 72  TALHEAVCHGNVHVVKIL-------TKQGPDNPYSANNYGKTPLYMAAKGRYS---EMVI 121
             L   V  G    +  L       +K   D+ Y+  + GKT L  A           ++
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 122 ELLETAHQC 130
            LL+     
Sbjct: 64  PLLQIDKDS 72

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 67.7 bits (165), Expect = 4e-14
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 18/114 (15%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
            + A+     R+AA+ GH  +++ L +               +    +++ M   E   A
Sbjct: 123 VIQAENYQAFRLAAENGHLHVLNRLCE---------------LAPT-EIMAMIQAENYHA 166

Query: 74  LHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGR-YSEMVIELLE 125
              A  +G++HV+  L +  P                 AA GR +  ++  LL+
Sbjct: 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD 220

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 61.1 bits (148), Expect = 8e-12
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 22/120 (18%)

Query: 10  SLLLNVNAKGDTPLRVAAKFGHS---DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMA 66
           S       K +    VAA  G S   D + +L+                       +++ 
Sbjct: 83  SDAHKKGIKSEVICFVAAITGCSSALDTLCLLLT---------------SDEI---VKVI 124

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             E   A   A  +G++HV+  L +  P                +AA+  +  ++  L E
Sbjct: 125 QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE 184

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 17/90 (18%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
            + A+     R+AA+ GH  +++ L +               +        M   E   A
Sbjct: 158 MIQAENYHAFRLAAENGHLHVLNRLCE---------------LAPTEATA-MIQAENYYA 201

Query: 74  LHE-AVCHGNVHVVKILTKQGPDNPYSANN 102
               AV  G+ +V+  L        Y+  +
Sbjct: 202 FRWAAVGRGHHNVINFLLDCPVMLAYAEIH 231

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 49.6 bits (118), Expect = 7e-08
 Identities = 17/113 (15%), Positives = 30/113 (26%), Gaps = 14/113 (12%)

Query: 17  AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHE 76
            +G   LR   +     ++  +       +     P     A          + N  L  
Sbjct: 276 LQGFYMLRNLIRRNDEVLLDDI-------RFLLSIPGIKALAP---TATIPGDANELLRL 325

Query: 77  AVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129
           A+  GN     +L         +  N      Y+   G   ++    LE  H 
Sbjct: 326 ALRLGNQGACALLLSIPSVLALTKAN----NYYINETGGRLDLRAVALEHHHH 374

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 42.6 bits (100), Expect = 1e-05
 Identities = 9/125 (7%), Positives = 27/125 (21%), Gaps = 11/125 (8%)

Query: 11  LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            LL+             ++G   +   + +     +      +         +   +   
Sbjct: 217 FLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECL 276

Query: 71  N--TALHEAVCHGNVHVVKILT--------KQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
                L   +   +  ++  +         K       +        L +A +       
Sbjct: 277 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA-TIPGDANELLRLALRLGNQGAC 335

Query: 121 IELLE 125
             LL 
Sbjct: 336 ALLLS 340

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 8/75 (10%), Positives = 21/75 (28%), Gaps = 21/75 (28%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
           +    +  LR+A + G+    ++L+                I +           K    
Sbjct: 315 IPGDANELLRLALRLGNQGACALLLS---------------IPSVL------ALTKANNY 353

Query: 75  HEAVCHGNVHVVKIL 89
           +     G + +  + 
Sbjct: 354 YINETGGRLDLRAVA 368

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 65.3 bits (159), Expect = 9e-14
 Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 22/115 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
                     T L  A   GH++IV  L+      Q          G     +   ++  
Sbjct: 32  LATRTDQDSRTALHWACSAGHTEIVEFLL------QL---------GVP---VNDKDDAG 73

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            + LH A   G   +VK L  +G     + N  G TPL+ AA     E+ + LLE
Sbjct: 74  WSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLE 127

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 62.6 bits (152), Expect = 1e-12
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 19/107 (17%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
                 +A      ++   +     +A            +        + +  TALH A 
Sbjct: 7   NIMICNLAYSGKLDELKERI-----LAD----------KSL---ATRTDQDSRTALHWAC 48

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
             G+  +V+ L + G       ++ G +PL++AA     E+V  LL 
Sbjct: 49  SAGHTEIVEFLLQLGV-PVNDKDDAGWSPLHIAASAGXDEIVKALLV 94

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 53.3 bits (128), Expect = 2e-09
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 25/133 (18%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGI-------------- 56
            VN K   G +PL +AA  G  +IV  L+         +    + +              
Sbjct: 65  PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVM 124

Query: 57  ----GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
               GA+       ++   TA+H A   GN+ +V IL           +  G TPL++A 
Sbjct: 125 LLEGGAN---PDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLAC 180

Query: 113 KGRYSEMVIELLE 125
                E    L+ 
Sbjct: 181 DEERVEEAKFLVT 193

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 49.5 bits (118), Expect = 6e-08
 Identities = 31/127 (24%), Positives = 45/127 (35%), Gaps = 24/127 (18%)

Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
            EI  +      N +AK     T +  AA  G+  +V +L+                  A
Sbjct: 119 HEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY---------------KA 163

Query: 59  DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSE 118
                 + + E NT LH A     V   K L  QG    Y  N   KTPL +A       
Sbjct: 164 S---TNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKG--GLG 217

Query: 119 MVIELLE 125
           ++++ L 
Sbjct: 218 LILKRLA 224

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 65.6 bits (160), Expect = 1e-13
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 27/147 (18%)

Query: 3   EILELCPSLLLNVNAK----GDTPLRVA---AKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
             L+     L +   K    G T L  A      G +D +++L+  A+         +  
Sbjct: 34  PFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT----DSLKQF 89

Query: 56  IGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD-------------NPYSANN 102
           + A       +  +  TALH A+   N+ +V +L + G D                    
Sbjct: 90  VNAS---YTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY 146

Query: 103 YGKTPLYMAAKGRYSEMVIELLETAHQ 129
           +G+ PL +AA      +V  LL+ + Q
Sbjct: 147 FGELPLSLAACTNQLAIVKFLLQNSWQ 173

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 64.8 bits (158), Expect = 2e-13
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
             KG T L +A +  +  +V++LV+  A +    +G+                      L
Sbjct: 98  YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRP-----GFYFGELPL 152

Query: 75  HEAVCHGNVHVVKILTKQGPD--NPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
             A C   + +VK L +      +  + ++ G T L+   +   + +      T+
Sbjct: 153 SLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTS 207

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 63.3 bits (154), Expect = 7e-13
 Identities = 26/122 (21%), Positives = 38/122 (31%), Gaps = 30/122 (24%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G+ PL +AA      IV  L+Q      +          AD   I   ++  NT LH  V
Sbjct: 148 GELPLSLAACTNQLAIVKFLLQ------NS------WQPAD---ISARDSVGNTVLHALV 192

Query: 79  CHGNVHVVKILTK---------------QGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
              +  V                              N  G TPL +AA      ++  +
Sbjct: 193 EVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

Query: 124 LE 125
           L+
Sbjct: 253 LQ 254

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 15/107 (14%), Positives = 38/107 (35%), Gaps = 21/107 (19%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD----RQMIRMA 66
           +++A+   G+T L    +   + + +    T+   +         +GA      ++  + 
Sbjct: 176 DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI------LGAKLHPTLKLEEIT 229

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK 113
           N +  T L  A   G + V+  + ++          +     + AA 
Sbjct: 230 NRKGLTPLALAASSGKIGVLAYILQRE--------IHEPECRHAAAH 268

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 16/125 (12%), Positives = 37/125 (29%), Gaps = 23/125 (18%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
                    +  A    +   +  L+   +  +            D +       +  T 
Sbjct: 8   PPRLYDRRSIFDAVAQSNCQELESLLPFLQ--RSKK------RLTDSEFKDPETGK--TC 57

Query: 74  LHEAVCH---GNVHVVKILTKQGPD----------NPYSANNYGKTPLYMAAKGRYSEMV 120
           L +A+ +   G    + +L                +   +   G+T L++A + R   +V
Sbjct: 58  LLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLV 117

Query: 121 IELLE 125
             L+E
Sbjct: 118 TLLVE 122

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 25/69 (36%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           N KG TPL +AA  G   +++ ++Q                             +    H
Sbjct: 230 NRKGLTPLALAASSGKIGVLAYILQR---------------EIH----------EPECRH 264

Query: 76  EAVCHGNVH 84
            A  H + H
Sbjct: 265 AAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 13/76 (17%)

Query: 65  MANNEKN---TALHEAVCHGN-------VHVVKILTKQGPDNPYSANNYGKTPLYMA--- 111
                +     ++ +AV   N       +  ++   K+  D+ +     GKT L  A   
Sbjct: 5   GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLN 64

Query: 112 AKGRYSEMVIELLETA 127
                ++ +  LL+ A
Sbjct: 65  LHNGQNDTIALLLDVA 80

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 63.6 bits (155), Expect = 6e-13
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 33/150 (22%)

Query: 2   EEILELCPSLLL---NVNAK-------GDTPLRVAA---KFGHSDIVSVLVQTAKIAQHG 48
           + +  L   LL     +  +       G T L  A      G +D + +L+  A+     
Sbjct: 19  DGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAE----K 74

Query: 49  DGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG-------------PD 95
            G     I +     R       TALH A+     H V++L ++G             P 
Sbjct: 75  TGNMREFINSP---FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPK 131

Query: 96  NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +      +G+ PL +AA      +V  L E
Sbjct: 132 DEGGYFYFGELPLSLAACTNQPHIVHYLTE 161

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 62.5 bits (152), Expect = 1e-12
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 30/122 (24%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           G+ PL +AA      IV  L +      +G  +      AD   +R  ++  NT LH  V
Sbjct: 140 GELPLSLAACTNQPHIVHYLTE------NGHKQ------AD---LRRQDSRGNTVLHALV 184

Query: 79  CHGNVH---------VVKILTKQGPD------NPYSANNYGKTPLYMAAKGRYSEMVIEL 123
              +           +  +L  +              NN G +PL MAAK     +   +
Sbjct: 185 AIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHI 244

Query: 124 LE 125
           + 
Sbjct: 245 IR 246

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 62.0 bits (150), Expect = 3e-12
 Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 25/119 (21%)

Query: 1   MEEILELCPSLLLNVNAKGD----TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGI 56
           ++E+ +  P+  LN+N   D    TPL       + ++V  LV+                
Sbjct: 109 LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK---------------H 153

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVH---VVKILTKQGPDNPYSANNYGKTPLYMAA 112
           G++       +N   + L +AV   N +     + L           ++  +T L+   
Sbjct: 154 GSN---RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII 209

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 32/143 (22%)

Query: 1   MEEILELCPSLLLNVNAKGDTPL------------RVAAKFGHSDIVSVLVQ-------- 40
            E +L+     L+  ++   T L              AAK+    ++  +V+        
Sbjct: 183 FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQS 242

Query: 41  ------TAKIAQHGDGEPESGIGADRQMIRMAN-NEK----NTALHEAVCHGNVHVVKIL 89
                 +    ++G+ +       D + I     N +    +T L+ A   GN+ +V  L
Sbjct: 243 GTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL 302

Query: 90  TKQGPDNPYSANNYGKTPLYMAA 112
              G D P+ AN  G  P+   A
Sbjct: 303 LDYGAD-PFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 52.0 bits (124), Expect = 1e-08
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK---GRYSEMVIEL 123
           +   NT LH      N+ +VK L K G  N    +N G++ L  A K      S     L
Sbjct: 128 DEHGNTPLHWLTSIANLELVKHLVKHG-SNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186

Query: 124 LETAHQC 130
           L+  + C
Sbjct: 187 LDYLYPC 193

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 51.9 bits (124), Expect = 1e-08
 Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 17/120 (14%)

Query: 8   CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN 67
            P    +  A  +  L +A K  +    + L     I Q+G              +    
Sbjct: 179 QPLPGPDAQAPEELVLHLAVKVANQ---ASLPLVDFIIQNG---------GH---LDAKA 223

Query: 68  NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
            + NTALH A  +     +K+L K       + N  G+T L +A K  + E   ELLE A
Sbjct: 224 ADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECE-ELLEQA 281

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 50.0 bits (119), Expect = 4e-08
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 17/114 (14%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
           N +   +T L +A +      + +      + Q+               +     + +TA
Sbjct: 164 NGHEPDETALHLAVRSVDRTSLHI---VDFLVQNSGN------------LDKQTGKGSTA 208

Query: 74  LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
           LH      N   +K+L +        AN  G+TPL +A + ++     ELL  A
Sbjct: 209 LHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCE-ELLTQA 260

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
           +  A  +  L +A K  +   +  LV    I Q+G              +     + NTA
Sbjct: 166 DAQAPEELVLHLAVKVANQASL-PLVDF--IIQNG---------GH---LDAKAADGNTA 210

Query: 74  LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129
           LH A  +     +K+L K       + N  G+T L +A K  + E   ELLE A  
Sbjct: 211 LHYAALYNQPDCLKLLLKGRA-LVGTVNEAGETALDIARKKHHKECE-ELLEQAQA 264

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	161
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.98
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.97
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.97
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.97
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.96
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.96
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.96
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.96
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.96
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.96
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.96
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.96
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.96
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.96
2rfa_A	232	Transient receptor potential cation channel subfa	99.95
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.95
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.95
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.95
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.95
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.95
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.95
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.95
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.95
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.95
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.95
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.95
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.95
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.95
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.95
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.94
2etb_A	256	Transient receptor potential cation channel subfam	99.94
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.94
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.94
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.94
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.94
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.94
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.94
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.94
2pnn_A	273	Transient receptor potential cation channel subfa	99.94
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.94
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.94
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.94
2rfa_A	232	Transient receptor potential cation channel subfa	99.94
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.94
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.94
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.94
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.94
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.93
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.93
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.93
2etb_A	256	Transient receptor potential cation channel subfam	99.93
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.93
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.93
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.93
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.93
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.93
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.93
2pnn_A	273	Transient receptor potential cation channel subfa	99.93
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.93
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.93
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.93
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.93
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.93
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.93
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.93
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.92
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.92
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.92
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.92
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.92
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.92
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.92
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.92
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.92
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.92
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.92
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.92
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.92
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.91
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.91
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.91
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.91
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.91
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.91
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.91
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.91
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.91
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.9
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.9
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.9
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.9
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.89
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.89
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.88
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.88
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.88
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.88
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.88
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.88
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.87
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.87
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.87
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.86
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.86
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.86
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.84
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.83
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.82
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.8
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.79
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.77

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.98  E-value=1.9e-31  Score=171.35  Aligned_cols=135  Identities=24%  Similarity=0.344  Sum_probs=122.0

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.|| ..+++++.+|..|+||||+|+..++.+++++|++.|++++.                  ++..|.||||+|+..|
T Consensus        21 ~~Ll-~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~------------------~d~~g~TpLh~A~~~g   81 (169)
T 4gpm_A           21 KDLI-ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENG   81 (169)
T ss_dssp             HHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred             HHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh------------------hccCCCCHHHHHHHcC
Confidence            4444 56789999999999999999999999999999999988654                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      +.+++++|++.|++ ++.+|..|+||||+|++.|+.+++++|+++|++++.+|..|+||+++|.   ...+.+.|.++
T Consensus        82 ~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~  158 (169)
T 4gpm_A           82 HKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ  158 (169)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             CHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            99999999999998 8899999999999999999999999999999999999999999999964   45566666554

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.97  E-value=2.2e-31  Score=182.72  Aligned_cols=141  Identities=20%  Similarity=0.196  Sum_probs=124.7

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANN   68 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~   68 (161)
                      +|...+++++.+|.+|+||||+|+..|+.+++++|++.|++++..+..+.+++...               +..++.++.
T Consensus        71 ~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~  150 (269)
T 4b93_B           71 KVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL  150 (269)
T ss_dssp             ----CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred             HHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC
Confidence            34456788999999999999999999999999999999999988877776665332               233566788


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      .|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|.
T Consensus       151 ~g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~  226 (269)
T 4b93_B          151 SGNTPLIYACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAE  226 (269)
T ss_dssp             TCCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            999999999999999999999999998 8899999999999999999999999999999999999999999999964

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.97  E-value=3.5e-29  Score=160.99  Aligned_cols=137  Identities=23%  Similarity=0.237  Sum_probs=122.5

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH   80 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~   80 (161)
                      ++.+++..+..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..
T Consensus        18 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~   79 (172)
T 3v30_A           18 LKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------------------LAKERESALSLASTG   79 (172)
T ss_dssp             HHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHT
T ss_pred             HHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh------------------hcccCCCHHHHHHHC
Confidence            35677787777999999999999999999999999999999988554                  688899999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTRY  156 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~  156 (161)
                      ++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++..   ..+.+.|.++
T Consensus        80 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  157 (172)
T 3v30_A           80 GYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH  157 (172)
T ss_dssp             TCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence            999999999999998 88899999999999999999999999999999999999999999999643   4455555443

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.97  E-value=4e-29  Score=161.80  Aligned_cols=137  Identities=19%  Similarity=0.196  Sum_probs=122.8

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH   80 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~   80 (161)
                      |+.+++..+..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..
T Consensus        21 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~   82 (179)
T 3f6q_A           21 VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV------------------MNRGDDTPLHLAASH   82 (179)
T ss_dssp             HHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHT
T ss_pred             HHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHc
Confidence            35677777888999999999999999999999999999999988654                  688999999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      |+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++.   ...+.+.|.++
T Consensus        83 ~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~  160 (179)
T 3f6q_A           83 GHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM  160 (179)
T ss_dssp             TCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998 8899999999999999999999999999999999999999999999853   34445555443

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.96  E-value=5.1e-29  Score=159.22  Aligned_cols=135  Identities=22%  Similarity=0.200  Sum_probs=119.9

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++..+...+..+..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..+
T Consensus        25 ~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~   86 (165)
T 3twr_A           25 KKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA------------------KDKGGLVPLHNACSYG   86 (165)
T ss_dssp             HHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred             HHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc------------------cCCCCCCHHHHHHHcC
Confidence            4566667778888889999999999999999999999999987554                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH--hHHHHHHHHh
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ--CTFILLSLTR  155 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~--~~~~~~~l~~  155 (161)
                      +.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++.  ...+.+.|..
T Consensus        87 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i~~~L~~  161 (165)
T 3twr_A           87 HYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQDLLRG  161 (165)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHHHHHHHT
T ss_pred             cHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhcCChHHHHHHhh
Confidence            99999999999998 8889999999999999999999999999999999999999999999853  3345555443

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.96  E-value=5.7e-29  Score=154.58  Aligned_cols=122  Identities=23%  Similarity=0.183  Sum_probs=111.8

Q ss_pred             ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410           14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG   93 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g   93 (161)
                      .+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++.+++++|++.|
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g   66 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV------------------KDHAGWTPLHEACNHGHLKVVELLLQHK   66 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            6789999999999999999999999999887554                  6889999999999999999999999999


Q ss_pred             CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHHH
Q 037410           94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLT  154 (161)
Q Consensus        94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l~  154 (161)
                      ++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++........+.
T Consensus        67 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~  126 (137)
T 3c5r_A           67 AL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL  126 (137)
T ss_dssp             CC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred             Cc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence            98 8889999999999999999999999999999999999999999999976655555443

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.96  E-value=7.4e-29  Score=153.95  Aligned_cols=127  Identities=17%  Similarity=0.178  Sum_probs=114.6

Q ss_pred             CccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410            9 PSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI   88 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~   88 (161)
                      +..++.+|..|.||||+|+..|+.+++++|++.|.+++.                  ++..|.||||+|+. ++.+++++
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~-~~~~~v~~   62 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNA------------------LNRFGRRPIQVMMM-GSAQVAEL   62 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCTTTTTSTT-SCHHHHHH
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC------------------cCCCCCCHHHHHHc-CCHHHHHH
Confidence            457788999999999999999999999999999887554                  68899999999999 99999999


Q ss_pred             HHHcCCCCccccCCC-CCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           89 LTKQGPDNPYSANNY-GKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        89 L~~~g~~~~~~~~~~-~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      |++.|++ ++.++.. |.||||+|+..++.+++++|+++|++++.+|..|+||++++.   ...+.+.|.+
T Consensus        63 Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~  132 (136)
T 1d9s_A           63 LLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA  132 (136)
T ss_dssp             HHHHTCC-SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred             HHHCCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            9999998 8889999 999999999999999999999999999999999999999974   3445555544

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.96  E-value=3.4e-28  Score=155.67  Aligned_cols=135  Identities=24%  Similarity=0.267  Sum_probs=119.4

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++. +..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..+
T Consensus        20 ~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~   80 (167)
T 3v31_A           20 ATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------------------LGKGRESALSLACSKG   80 (167)
T ss_dssp             HHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHT
T ss_pred             HHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcC
Confidence            445555 577899999999999999999999999999999887554                  6888999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTRY  156 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~  156 (161)
                      +.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.++..|+||++++..   ..+.+.|.++
T Consensus        81 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  157 (167)
T 3v31_A           81 YTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH  157 (167)
T ss_dssp             CHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence            99999999999998 88899999999999999999999999999999999999999999999644   4455555443

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.96  E-value=2.8e-28  Score=160.20  Aligned_cols=155  Identities=23%  Similarity=0.237  Sum_probs=128.9

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh----------------hhhhh
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD----------------RQMIR   64 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~----------------~~~~~   64 (161)
                      ++.++...+..++..|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...                ....+
T Consensus        21 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~  100 (201)
T 3hra_A           21 VKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLN  100 (201)
T ss_dssp             HHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred             HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccc
Confidence            35677777778999999999999999999999999999999999988877776665431                12345


Q ss_pred             hhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC-----hHHHHHHHhcCCCCCCCCCcccc
Q 037410           65 MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY-----SEMVIELLETAHQCPMKAPTERQ  139 (161)
Q Consensus        65 ~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~-----~~~~~~Ll~~g~~~~~~~~~~~t  139 (161)
                      ..+..|.||||+|+..|+.+++++|++.|+.+++..+..|.||||+|+..+.     .+++++|+++|++++.+|..|+|
T Consensus       101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t  180 (201)
T 3hra_A          101 KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT  180 (201)
T ss_dssp             CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred             cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCC
Confidence            5677899999999999999999999999944488889999999999999887     89999999999999999999999


Q ss_pred             hHHHHHh---HHHHHHHHh
Q 037410          140 LCMLQQC---TFILLSLTR  155 (161)
Q Consensus       140 ~l~~~~~---~~~~~~l~~  155 (161)
                      |++++..   ..+.+.|.+
T Consensus       181 ~l~~A~~~~~~~~~~~Ll~  199 (201)
T 3hra_A          181 AMDYANQKGYTEISKILAQ  199 (201)
T ss_dssp             HHHHHHHHTCHHHHHHHHT
T ss_pred             HHHHHHHcCCHhHHHHHHh
Confidence            9998643   445554443

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.96  E-value=5.2e-28  Score=155.22  Aligned_cols=132  Identities=26%  Similarity=0.256  Sum_probs=117.8

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      |...+.+++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..|+.+
T Consensus        33 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~   94 (169)
T 2y1l_E           33 LMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA------------------VDHAGMTPLRLAALFGHLE   94 (169)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHH
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHH
Confidence            3445788899999999999999999999999999999887554                  6888999999999999999


Q ss_pred             HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410           85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR  155 (161)
Q Consensus        85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~  155 (161)
                      ++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++..   ..+.+.|.+
T Consensus        95 ~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~  167 (169)
T 2y1l_E           95 IVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK  167 (169)
T ss_dssp             HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence            99999999998 88899999999999999999999999999999999999999999999643   444444443

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.96  E-value=1.6e-28  Score=149.90  Aligned_cols=119  Identities=21%  Similarity=0.157  Sum_probs=108.0

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +..|.||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++.+++++|++.|++
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~   65 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR------------------TLEGGRKPLHYAADCGQLEILEFLLLKGAD   65 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------CCTTSSCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc------------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence            56789999999999999999999999887554                  788999999999999999999999999988


Q ss_pred             CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHH
Q 037410           96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSL  153 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l  153 (161)
                       ++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||++++....+..+|
T Consensus        66 -~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll  122 (123)
T 3aaa_C           66 -INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALL  122 (123)
T ss_dssp             -TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHH
T ss_pred             -CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHh
Confidence             889999999999999999999999999999999999999999999998776666654

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.96  E-value=4.2e-28  Score=153.28  Aligned_cols=125  Identities=20%  Similarity=0.261  Sum_probs=111.9

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++... ..+ .|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..|
T Consensus        19 ~~Ll~~g~-~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~   78 (153)
T 1awc_B           19 RILMANGA-PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA------------------RTKVDRTPLHMAASEG   78 (153)
T ss_dssp             HHHHHHTC-CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------------------CCTTCCCHHHHHHHHT
T ss_pred             HHHHHcCC-CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcC
Confidence            45565543 333 688899999999999999999999999887554                  6888999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      +.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++...
T Consensus        79 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~  143 (153)
T 1awc_B           79 HANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN  143 (153)
T ss_dssp             CHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             hHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            99999999999998 889999999999999999999999999999999999999999999997543

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.96  E-value=3.1e-28  Score=156.33  Aligned_cols=111  Identities=27%  Similarity=0.366  Sum_probs=97.8

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      ++...+++++.+|..|+||||+|+..|+.+++++|++.|++++.                  ++..|.||||+|+..|+.
T Consensus        55 ~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~------------------~d~~G~TpLh~A~~~g~~  116 (169)
T 4gpm_A           55 LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENGHK  116 (169)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCH
T ss_pred             HHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC------------------CCCCCCCHHHHHHHcCCH
Confidence            44466889999999999999999999999999999999988665                  788999999999999999


Q ss_pred             HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCC
Q 037410           84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMK  133 (161)
Q Consensus        84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~  133 (161)
                      +++++|++.|++ ++.+|..|.|||++|++.|+.+++++|+++|++++..
T Consensus       117 ~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~  165 (169)
T 4gpm_A          117 EVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHH  165 (169)
T ss_dssp             HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred             HHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence            999999999998 8899999999999999999999999999999998753

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.96  E-value=5.6e-28  Score=153.01  Aligned_cols=133  Identities=18%  Similarity=0.205  Sum_probs=118.4

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++..+..++..|..|+||||+ +..|+.+++++|++.|.+++.                  ++..|.||||+|+..|
T Consensus        19 ~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~   79 (156)
T 1bd8_A           19 RRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV------------------QDTSGTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred             HHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC------------------cCCCCCCHHHHHHHcC
Confidence            556766566889999999999999 999999999999999988654                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      +.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++ ++++.+|..|+||+++|.   ...+.+.|.+
T Consensus        80 ~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~  154 (156)
T 1bd8_A           80 FLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG  154 (156)
T ss_dssp             CHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred             cHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence            99999999999988 889999999999999999999999999999 999999999999999974   3445555544

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.95  E-value=9.4e-28  Score=160.98  Aligned_cols=130  Identities=25%  Similarity=0.286  Sum_probs=115.3

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++..+.+++.+|..|+||||+|+..|+.+++++|++.|.+.....             .+..+..|.||||+|+..|
T Consensus        20 ~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------------~~~~~~~g~t~L~~A~~~~   86 (232)
T 2rfa_A           20 SKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP-------------MTSELYEGQTALHIAVINQ   86 (232)
T ss_dssp             HHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC-------------CCSTTTTTCCHHHHHHHTT
T ss_pred             HHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc-------------ccccCCCCcCHHHHHHHcC
Confidence            566766689999999999999999999999999999999998753311             1335778999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCC-------------CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           82 NVHVVKILTKQGPDNPYSANN-------------YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~-------------~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      +.+++++|++.|++ ++..+.             .|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++.
T Consensus        87 ~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~  162 (232)
T 2rfa_A           87 NVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI  162 (232)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            99999999999988 666554             7999999999999999999999999999999999999999964

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.95  E-value=6.7e-28  Score=157.60  Aligned_cols=148  Identities=21%  Similarity=0.174  Sum_probs=115.8

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCCcc
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEKNT   72 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t   72 (161)
                      .+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++..               ...++..+..|.|
T Consensus        24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t  103 (192)
T 2rfm_A           24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT  103 (192)
T ss_dssp             HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred             hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence            3445667777778888888887777777777777777666665555554321               1224556788999


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHH
Q 037410           73 ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFI  149 (161)
Q Consensus        73 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~  149 (161)
                      |||+|+..++.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|.   ...+
T Consensus       104 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~  182 (192)
T 2rfm_A          104 PLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV  182 (192)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence            99999999999999999999988 7888999999999999999999999999999999999999999999863   4455


Q ss_pred             HHHHHhh
Q 037410          150 LLSLTRY  156 (161)
Q Consensus       150 ~~~l~~~  156 (161)
                      .+.|.++
T Consensus       183 v~~Ll~~  189 (192)
T 2rfm_A          183 IKIFTEV  189 (192)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            5555544

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.95  E-value=1.5e-27  Score=164.22  Aligned_cols=147  Identities=21%  Similarity=0.179  Sum_probs=126.5

Q ss_pred             cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchhh--------------------hhhhhhcCC
Q 037410           11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGADR--------------------QMIRMANNE   69 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~   69 (161)
                      .++.+|..|+||||+|+..|+.+++++|++.|. +++..+..+.+++...-                    ......+..
T Consensus       103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~  182 (276)
T 4hbd_A          103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA  182 (276)
T ss_dssp             HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred             cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence            478899999999999999999999999999998 88877777766654221                    123345677


Q ss_pred             CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHHH---
Q 037410           70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQQ---  145 (161)
Q Consensus        70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~---  145 (161)
                      |.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||+++|.   
T Consensus       183 g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g  261 (276)
T 4hbd_A          183 GQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAG  261 (276)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcC
Confidence            99999999999999999999999998 88999999999999999999999999999 89999999999999999964   


Q ss_pred             hHHHHHHHHhhhC
Q 037410          146 CTFILLSLTRYSG  158 (161)
Q Consensus       146 ~~~~~~~l~~~~~  158 (161)
                      ...+.+.|.+..+
T Consensus       262 ~~~iv~~Ll~~~~  274 (276)
T 4hbd_A          262 QSEIASMLYSRMN  274 (276)
T ss_dssp             CHHHHHHHHHHCC
T ss_pred             CHHHHHHHHhccC
Confidence            4466666666554

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.95  E-value=3.2e-27  Score=158.19  Aligned_cols=145  Identities=18%  Similarity=0.169  Sum_probs=91.1

Q ss_pred             CccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCCccH
Q 037410            9 PSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEKNTA   73 (161)
Q Consensus         9 ~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~   73 (161)
                      +..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...               ...++..+..|.||
T Consensus        63 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~  142 (231)
T 3aji_A           63 GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATA  142 (231)
T ss_dssp             TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence            445555555555555555555555555555555555555444444443211               11233455667777


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHH
Q 037410           74 LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFIL  150 (161)
Q Consensus        74 l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~  150 (161)
                      ||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++   +...+.
T Consensus       143 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~  221 (231)
T 3aji_A          143 MHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILK  221 (231)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred             HHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHH
Confidence            7777777777777777777776 666777777777777777777777777777777777777777777775   333444


Q ss_pred             HHHH
Q 037410          151 LSLT  154 (161)
Q Consensus       151 ~~l~  154 (161)
                      ..|.
T Consensus       222 ~lL~  225 (231)
T 3aji_A          222 RLAE  225 (231)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            4443

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.95  E-value=6.6e-28  Score=163.92  Aligned_cols=153  Identities=20%  Similarity=0.160  Sum_probs=126.9

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchh---------------hhhhhhhc
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGAD---------------RQMIRMAN   67 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~   67 (161)
                      +|...++.++.+|..|+||||+|+..|+.+++++|++.+. .++..+..+.+++...               ...++..+
T Consensus        75 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d  154 (253)
T 1yyh_A           75 RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD  154 (253)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC
Confidence            3445678889999999999999999999999999999987 6666666666655321               23356678


Q ss_pred             CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh-
Q 037410           68 NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC-  146 (161)
Q Consensus        68 ~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~-  146 (161)
                      ..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|++.++.+++++|+++|++++.+|..|+||+++|.. 
T Consensus       155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~  233 (253)
T 1yyh_A          155 DLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQER  233 (253)
T ss_dssp             TTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHc
Confidence            8899999999999999999999999998 88899999999999999999999999999999999999999999999644 


Q ss_pred             --HHHHHHHHhhh
Q 037410          147 --TFILLSLTRYS  157 (161)
Q Consensus       147 --~~~~~~l~~~~  157 (161)
                        ..+...|..+.
T Consensus       234 g~~~i~~~l~~~~  246 (253)
T 1yyh_A          234 MHHDIVRLLDLEH  246 (253)
T ss_dssp             TCHHHHHHHHC--
T ss_pred             CCHHHHHHHHHHh
Confidence              44455544443

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.95  E-value=5.2e-28  Score=170.13  Aligned_cols=143  Identities=18%  Similarity=0.143  Sum_probs=123.7

Q ss_pred             hHHHhCCccccc-cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh-------------------hh
Q 037410            3 EILELCPSLLLN-VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR-------------------QM   62 (161)
Q Consensus         3 ~ll~~~~~~~~~-~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-------------------~~   62 (161)
                      +++...+.+++. +|..|+||||+|+..|+.+++++|+++|++++..+..+.++++..-                   ..
T Consensus       114 ~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~  193 (327)
T 1sw6_A          114 DAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC  193 (327)
T ss_dssp             HHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG
T ss_pred             HHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc
Confidence            344566788898 8999999999999999999999999999999998888877764321                   23


Q ss_pred             hhhhcCCCccHHHHHHh----cCcHHHHHHHHHcCC--------------------C-----------------------
Q 037410           63 IRMANNEKNTALHEAVC----HGNVHVVKILTKQGP--------------------D-----------------------   95 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~----~~~~~~~~~L~~~g~--------------------~-----------------------   95 (161)
                      ++.++..|.||||+|+.    .|+.+++++|++.+.                    +                       
T Consensus       194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~  273 (327)
T 1sw6_A          194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIA  273 (327)
T ss_dssp             GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHH
Confidence            56778899999999998    899999999987742                    0                       


Q ss_pred             -CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           96 -NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        96 -~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                       .++.+|..|.||||+|++.|+.+++++|+++|++++.+|..|+||+|+|.
T Consensus       274 ~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~  324 (327)
T 1sw6_A          274 NMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  324 (327)
T ss_dssp             HTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             hCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence             16778899999999999999999999999999999999999999999863

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.95  E-value=3.7e-27  Score=161.94  Aligned_cols=145  Identities=21%  Similarity=0.241  Sum_probs=121.3

Q ss_pred             cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-------------------------------
Q 037410           11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD-------------------------------   59 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~-------------------------------   59 (161)
                      .++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.++++..                               
T Consensus        37 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~  116 (282)
T 1oy3_D           37 YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS  116 (282)
T ss_dssp             GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred             cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence            3788889999999999999999999999999998888776666555321                               


Q ss_pred             -------------------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCC-CCCcH
Q 037410           60 -------------------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN-YGKTP  107 (161)
Q Consensus        60 -------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~-~~~t~  107 (161)
                                                     ...++..+..|.||||+|+..|+.+++++|++.|++ ++..+. .|.||
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tp  195 (282)
T 1oy3_D          117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTP  195 (282)
T ss_dssp             ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCH
T ss_pred             cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCH
Confidence                                           012445677899999999999999999999999998 666664 59999


Q ss_pred             HHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhh
Q 037410          108 LYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRY  156 (161)
Q Consensus       108 l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~  156 (161)
                      ||+|++.++.+++++|+++|++++.+|..|+||+|+|   +...+.+.|.++
T Consensus       196 L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  247 (282)
T 1oy3_D          196 LHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH  247 (282)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHc
Confidence            9999999999999999999999999999999999996   455566666654

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.95  E-value=7.3e-27  Score=156.47  Aligned_cols=155  Identities=21%  Similarity=0.171  Sum_probs=130.7

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhh
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRM   65 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~   65 (161)
                      |+.+++..+...+.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++..               ...++.
T Consensus        22 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  101 (231)
T 3aji_A           22 LKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA  101 (231)
T ss_dssp             HHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC
Confidence            35678888888899999999999999999999999999999999888777776666432               123455


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      .+..|.||||+|+..++.+++++|++.|.+ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.
T Consensus       102 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~  180 (231)
T 3aji_A          102 VNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC  180 (231)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence            677899999999999999999999999988 7888889999999999999999999999999999999999999999863


Q ss_pred             ---hHHHHHHHHhh
Q 037410          146 ---CTFILLSLTRY  156 (161)
Q Consensus       146 ---~~~~~~~l~~~  156 (161)
                         ...+.+.|.++
T Consensus       181 ~~~~~~~v~~Ll~~  194 (231)
T 3aji_A          181 DEERVEEAKFLVTQ  194 (231)
T ss_dssp             HTTCHHHHHHHHHT
T ss_pred             HCCCHHHHHHHHHC
Confidence               34455555544

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=3e-27  Score=150.42  Aligned_cols=132  Identities=19%  Similarity=0.202  Sum_probs=116.3

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN   82 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~   82 (161)
                      .++ ..+..++.+|..|+||||+|+. |+.+++++|++.|.+++.                  .+..|.||||+|+..|+
T Consensus        23 ~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~   82 (162)
T 1ihb_A           23 SLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL------------------KDRTGFAVIHDAARAGF   82 (162)
T ss_dssp             HHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTC
T ss_pred             HHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCC
Confidence            344 4567888999999999999999 999999999999887554                  68899999999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC-CCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ-CPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      .+++++|++.|++ ++.++..|.||||+|++.++.+++++|+++|++ ++.++..|+||++++.   ...+.+.|.+
T Consensus        83 ~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~  158 (162)
T 1ihb_A           83 LDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA  158 (162)
T ss_dssp             HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence            9999999999988 889999999999999999999999999999998 6999999999999964   3445555544

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.95  E-value=3e-27  Score=160.65  Aligned_cols=154  Identities=19%  Similarity=0.164  Sum_probs=122.6

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh----------------hhhhh
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR----------------QMIRM   65 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~----------------~~~~~   65 (161)
                      +.+++......+..|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++..-                ..++.
T Consensus        40 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~  119 (253)
T 1yyh_A           40 SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA  119 (253)
T ss_dssp             ------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC
T ss_pred             HHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence            44555554444566899999999999999999999999999999988877777764321                13455


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH-
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ-  144 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~-  144 (161)
                      .+..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+|+| 
T Consensus       120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~  198 (253)
T 1yyh_A          120 RMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA  198 (253)
T ss_dssp             CCTTCCCHHHHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             cCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence            677899999999999999999999999988 888999999999999999999999999999999999999999999996 


Q ss_pred             --HhHHHHHHHHhh
Q 037410          145 --QCTFILLSLTRY  156 (161)
Q Consensus       145 --~~~~~~~~l~~~  156 (161)
                        +...+.+.|.++
T Consensus       199 ~~~~~~~v~~Ll~~  212 (253)
T 1yyh_A          199 REGSYETAKVLLDH  212 (253)
T ss_dssp             HHTCHHHHHHHHHT
T ss_pred             HCCCHHHHHHHHHc
Confidence              445566666554

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.95  E-value=2.2e-27  Score=155.11  Aligned_cols=93  Identities=24%  Similarity=0.209  Sum_probs=82.2

Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM  142 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  142 (161)
                      ++..+..|.||||+|+..++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|
T Consensus        61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~  139 (192)
T 2rfm_A           61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLI  139 (192)
T ss_dssp             TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred             cccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence            556678899999999999999999999999988 7889999999999999999999999999999999999999999999


Q ss_pred             HHHh---HHHHHHHHhh
Q 037410          143 LQQC---TFILLSLTRY  156 (161)
Q Consensus       143 ~~~~---~~~~~~l~~~  156 (161)
                      +|..   ..+.+.|..+
T Consensus       140 ~A~~~~~~~~v~~Ll~~  156 (192)
T 2rfm_A          140 VASKYGRSEIVKKLLEL  156 (192)
T ss_dssp             HHHHHTCHHHHHHHHHT
T ss_pred             HHHHcCCHHHHHHHHHC
Confidence            9643   4455555544

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.95  E-value=6.1e-27  Score=156.07  Aligned_cols=129  Identities=20%  Similarity=0.217  Sum_probs=70.0

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh----------------hhhhhhcCCCccHHHHHH
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR----------------QMIRMANNEKNTALHEAV   78 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~g~t~l~~a~   78 (161)
                      .|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...-                ...+..+..|.||||+|+
T Consensus        21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~  100 (223)
T 2f8y_A           21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA  100 (223)
T ss_dssp             CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred             cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence            3566666666666666666666666666665555544444432110                012233444555555555


Q ss_pred             hcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           79 CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        79 ~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      ..++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++
T Consensus       101 ~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A  165 (223)
T 2f8y_A          101 RLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA  165 (223)
T ss_dssp             HHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             HhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHH
Confidence            55555555555555554 445555555555555555555555555555555555555555555553

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.95  E-value=3.2e-27  Score=157.86  Aligned_cols=147  Identities=14%  Similarity=0.172  Sum_probs=113.6

Q ss_pred             ccccc-cCCCCCcHHHHHHHhCCHHHHHHHHHhh--HhhhcCCCCCCCccchh---------------hhhhhhhcCCCc
Q 037410           10 SLLLN-VNAKGDTPLRVAAKFGHSDIVSVLVQTA--KIAQHGDGEPESGIGAD---------------RQMIRMANNEKN   71 (161)
Q Consensus        10 ~~~~~-~~~~g~t~lh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~   71 (161)
                      ..++. .|..|+||||+|+..|+.+++++|++.|  .+++..+..+.++++..               +..++.++..|.
T Consensus        62 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~  141 (228)
T 2dzn_A           62 VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQ  141 (228)
T ss_dssp             CCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred             ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCC
Confidence            33444 6777888888888888888888888887  66666555555554321               122455677889


Q ss_pred             cHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHH-hcCCCCCCCCCcccchHHHHHhHHHH
Q 037410           72 TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL-ETAHQCPMKAPTERQLCMLQQCTFIL  150 (161)
Q Consensus        72 t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~t~l~~~~~~~~~  150 (161)
                      ||||+|+..|+.+++++|++.|..+++.++..|.||||+|+..++.+++++|+ ++|++++.+|..|+||++++....+.
T Consensus       142 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~  221 (228)
T 2dzn_A          142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVK  221 (228)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHH
T ss_pred             CHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHH
Confidence            99999999999999999999984337888889999999999999999999999 88999999999999999988776666


Q ss_pred             HHHHhh
Q 037410          151 LSLTRY  156 (161)
Q Consensus       151 ~~l~~~  156 (161)
                      +.|.++
T Consensus       222 ~~l~~~  227 (228)
T 2dzn_A          222 KFFLNN  227 (228)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            666553

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.95  E-value=1.2e-26  Score=154.63  Aligned_cols=152  Identities=20%  Similarity=0.201  Sum_probs=125.4

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGAD---------------RQMIRMANN   68 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~   68 (161)
                      |...+..++.+|..|+||||+|+..|+.+++++|++.+. .++..+..+.+++...               ...++..+.
T Consensus        44 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~  123 (223)
T 2f8y_A           44 LLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD  123 (223)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC
Confidence            334567788888889999999999999999999998877 5666555555554321               123456688


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---  145 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---  145 (161)
                      .|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|++.++.+++++|+++|++++.+|..|+||++++.   
T Consensus       124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~  202 (223)
T 2f8y_A          124 LGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM  202 (223)
T ss_dssp             TSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhc
Confidence            899999999999999999999999988 8889999999999999999999999999999999999999999999964   


Q ss_pred             hHHHHHHHHhhh
Q 037410          146 CTFILLSLTRYS  157 (161)
Q Consensus       146 ~~~~~~~l~~~~  157 (161)
                      ...+.+.|.++.
T Consensus       203 ~~~i~~~L~~~g  214 (223)
T 2f8y_A          203 HHDIVRLLDEYN  214 (223)
T ss_dssp             CHHHHHHHHHTT
T ss_pred             chHHHHHHHHcC
Confidence            445666665543

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.95  E-value=3.4e-27  Score=146.42  Aligned_cols=122  Identities=22%  Similarity=0.212  Sum_probs=108.5

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP   94 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~   94 (161)
                      ....+.||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++.+++++|++.|+
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   71 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNA------------------KDEYGLTPLYLATAHGHLEIVEVLLKNGA   71 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            345688999999999999999999999887554                  68899999999999999999999999998


Q ss_pred             CCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           95 DNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        95 ~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      + ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|.   ...+.+.|.+
T Consensus        72 ~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~  134 (136)
T 2jab_A           72 D-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK  134 (136)
T ss_dssp             C-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             C-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            8 8889999999999999999999999999999999999999999999964   3445555544

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.95  E-value=5.6e-27  Score=157.38  Aligned_cols=137  Identities=22%  Similarity=0.186  Sum_probs=113.2

Q ss_pred             ChhHHHhCCc--cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHH
Q 037410            1 MEEILELCPS--LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV   78 (161)
Q Consensus         1 ~~~ll~~~~~--~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~   78 (161)
                      |+++|+....  ..+..+..+.||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~d~~g~tpLh~A~   62 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQ------------------PNEEGITALHNAI   62 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC------------------CCTTSCCHHHHHH
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCC------------------CCCCCCCHHHHHH
Confidence            4566665332  2344456788999999999999999999999987554                  7889999999999


Q ss_pred             hcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCC-CcccchHHHH-----HhHHHHHH
Q 037410           79 CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKA-PTERQLCMLQ-----QCTFILLS  152 (161)
Q Consensus        79 ~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~l~~~-----~~~~~~~~  152 (161)
                      ..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|+||++++     +...+.+.
T Consensus        63 ~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~  141 (229)
T 2vge_A           63 CGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATY  141 (229)
T ss_dssp             HTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence            99999999999999998 88999999999999999999999999999999999986 6999999998     66667776


Q ss_pred             HHhh
Q 037410          153 LTRY  156 (161)
Q Consensus       153 l~~~  156 (161)
                      |..+
T Consensus       142 Ll~~  145 (229)
T 2vge_A          142 LADV  145 (229)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            6654

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.95  E-value=6.2e-27  Score=157.35  Aligned_cols=140  Identities=25%  Similarity=0.255  Sum_probs=110.7

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhh-HhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTA-KIAQHGDGEPESGIGAD---------------RQMIRMANN   68 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~   68 (161)
                      |...+..++.++..|.||||+|+..|+.+++++|++.+ ..++..+..+.+++...               ...++..+.
T Consensus        63 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~  142 (237)
T 3b7b_A           63 LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDN  142 (237)
T ss_dssp             HHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             HHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCC
Confidence            33456666777777777777777777777777777776 45555554444443221               122345678


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      .|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|++.++.+++++|+++|++++.+|..|+||++++.
T Consensus       143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~  218 (237)
T 3b7b_A          143 EENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCAS  218 (237)
T ss_dssp             TSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence            899999999999999999999999988 7888999999999999999999999999999999999999999999853

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.94  E-value=2.8e-26  Score=153.26  Aligned_cols=153  Identities=20%  Similarity=0.182  Sum_probs=124.8

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhh--Hhhhc-CCCCCCCccchh---------------h--
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTA--KIAQH-GDGEPESGIGAD---------------R--   60 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~--~~~~~-~~~~~~~~~~~~---------------~--   60 (161)
                      |+.+++..+...+.+|..|+||||+|+..|+.+++++|++.|  .+++. .+..+.+++...               .  
T Consensus        18 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~   97 (228)
T 2dzn_A           18 VQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK   97 (228)
T ss_dssp             HHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSC
T ss_pred             HHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence            356777877777779999999999999999999999999999  44444 444555554321               1  


Q ss_pred             hhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC-CCCCCCCCcccc
Q 037410           61 QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA-HQCPMKAPTERQ  139 (161)
Q Consensus        61 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t  139 (161)
                      ..++..+..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++| ++++.+|..|+|
T Consensus        98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t  176 (228)
T 2dzn_A           98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT  176 (228)
T ss_dssp             CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCC
T ss_pred             cccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCC
Confidence            33455577899999999999999999999999988 7888999999999999999999999999999 999999999999


Q ss_pred             hHHHHH---hHHHHHHHH
Q 037410          140 LCMLQQ---CTFILLSLT  154 (161)
Q Consensus       140 ~l~~~~---~~~~~~~l~  154 (161)
                      |+|++.   ...+...|.
T Consensus       177 ~L~~A~~~~~~~~v~~Ll  194 (228)
T 2dzn_A          177 PLFHALAEGHGDAAVLLV  194 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHH
Confidence            999864   344555555

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.94  E-value=1.4e-26  Score=157.51  Aligned_cols=132  Identities=20%  Similarity=0.146  Sum_probs=112.1

Q ss_pred             hCCccccc----cCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh
Q 037410            7 LCPSLLLN----VNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC   79 (161)
Q Consensus         7 ~~~~~~~~----~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~   79 (161)
                      ..+..++.    +|..|+||||+|+..   |+.+++++|++.|++.+..+..       ........+..|.||||+|+.
T Consensus        27 ~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~-------~~~~~~~~d~~g~t~L~~A~~   99 (256)
T 2etb_A           27 WNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL-------VNAQCTDEFYQGHSALHIAIE   99 (256)
T ss_dssp             HHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG-------GGCCCCSTTTTTCCHHHHHHH
T ss_pred             HcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh-------cccccccccccCCCHHHHHHH
Confidence            45677787    899999999999999   9999999999999987642200       000011235679999999999


Q ss_pred             cCcHHHHHHHHHcCCCCccccCCC-------------CCcHHHHHHhCCChHHHHHHHh---cCCCCCCCCCcccchHHH
Q 037410           80 HGNVHVVKILTKQGPDNPYSANNY-------------GKTPLYMAAKGRYSEMVIELLE---TAHQCPMKAPTERQLCML  143 (161)
Q Consensus        80 ~~~~~~~~~L~~~g~~~~~~~~~~-------------~~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~l~~  143 (161)
                      .|+.+++++|++.|++ ++..+..             |.||||+|+..|+.+++++|++   +|++++.+|..|+||||+
T Consensus       100 ~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~  178 (256)
T 2etb_A          100 KRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHA  178 (256)
T ss_dssp             TTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred             cCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHH
Confidence            9999999999999998 7777765             9999999999999999999999   999999999999999999


Q ss_pred             HHh
Q 037410          144 QQC  146 (161)
Q Consensus       144 ~~~  146 (161)
                      +..
T Consensus       179 A~~  181 (256)
T 2etb_A          179 LVM  181 (256)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            754

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.94  E-value=6.8e-27  Score=160.62  Aligned_cols=122  Identities=24%  Similarity=0.217  Sum_probs=100.3

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhcCcHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~   86 (161)
                      .+..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+ ..|.||||+|+..|+.+++
T Consensus       147 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~~g~tpL~~A~~~~~~~~v  208 (282)
T 1oy3_D          147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK------------------PEPTCGRTPLHLAVEAQAASVL  208 (282)
T ss_dssp             GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTTCCCHHHHHHHTTCHHHH
T ss_pred             hhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCcCHHHHHHHcCCHHHH
Confidence            3456788899999999999999999999999999988665                  44 4599999999999999999


Q ss_pred             HHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410           87 KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF  148 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~  148 (161)
                      ++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.++..|.||++++....
T Consensus       209 ~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~  269 (282)
T 1oy3_D          209 ELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS  269 (282)
T ss_dssp             HHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred             HHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence            999999998 8899999999999999999999999999999999999999999999876543

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.94  E-value=4.3e-26  Score=139.14  Aligned_cols=119  Identities=30%  Similarity=0.417  Sum_probs=107.3

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      +|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++.+++++|++.|++ +
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~   61 (126)
T 1n0r_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V   61 (126)
T ss_dssp             CCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-T
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-C
Confidence            589999999999999999999999887554                  678899999999999999999999999988 7


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR  155 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~  155 (161)
                      +.++..|.||||+|+..++.+++++|+++|++++.+|..|+||++++..   ..+.+.|.+
T Consensus        62 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~  122 (126)
T 1n0r_A           62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE  122 (126)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999743   445555444

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.94  E-value=2.8e-27  Score=157.89  Aligned_cols=126  Identities=21%  Similarity=0.179  Sum_probs=111.6

Q ss_pred             cccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc
Q 037410           13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ   92 (161)
Q Consensus        13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~   92 (161)
                      +..+..|.||||+||..|+.+++++|++.|.+++.                  ++..|.||||+|+..|+.+++++|++.
T Consensus        67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~  128 (222)
T 3ehr_A           67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG------------------LDKAGSTALYWACHGGHKDIVEMLFTQ  128 (222)
T ss_dssp             HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHTTS
T ss_pred             cccccccccccccccccCcHHHHHHHHhCCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHcC
Confidence            34566789999999999999999999999887554                  688999999999999999999999999


Q ss_pred             -CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHHHhhh
Q 037410           93 -GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSLTRYS  157 (161)
Q Consensus        93 -g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l~~~~  157 (161)
                       |++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|.......++....
T Consensus       129 ~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~  193 (222)
T 3ehr_A          129 PNIE-LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQ  193 (222)
T ss_dssp             TTCC-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred             CCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence             776 8899999999999999999999999999999999999999999999976666666655543

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.94  E-value=6.3e-26  Score=152.64  Aligned_cols=148  Identities=22%  Similarity=0.187  Sum_probs=114.8

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------h------h----hhhhhc
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------R------Q----MIRMAN   67 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~------~----~~~~~~   67 (161)
                      ..+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+..++...         .      .    .++..+
T Consensus        34 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~  113 (241)
T 1k1a_A           34 QGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN  113 (241)
T ss_dssp             HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC
T ss_pred             hcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccC
Confidence            46778888899999999999999999999999999988888777666665321         0      0    344556


Q ss_pred             CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH-
Q 037410           68 NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ-  145 (161)
Q Consensus        68 ~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~-  145 (161)
                      ..|.||||+|+..++.+++++|++.|++ ++..+ ..|.||||+|++.++.+++++|+++|++++.++..|+||+|++. 
T Consensus       114 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~  192 (241)
T 1k1a_A          114 YDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG  192 (241)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred             cCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            7788888888888888888888888877 56666 67888888888888888888888888888888888888888853 


Q ss_pred             --hHHHHHHHHh
Q 037410          146 --CTFILLSLTR  155 (161)
Q Consensus       146 --~~~~~~~l~~  155 (161)
                        ...+.+.|.+
T Consensus       193 ~~~~~~v~~Ll~  204 (241)
T 1k1a_A          193 RGLLPLVRTLVR  204 (241)
T ss_dssp             HTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHh
Confidence              3344444444

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.94  E-value=1.1e-26  Score=156.19  Aligned_cols=146  Identities=21%  Similarity=0.229  Sum_probs=120.6

Q ss_pred             cccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------------------hhhhhhcCC
Q 037410           11 LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------------------QMIRMANNE   69 (161)
Q Consensus        11 ~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~   69 (161)
                      .++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.++++..-                     ...+..+..
T Consensus        37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~  116 (236)
T 1ikn_D           37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN  116 (236)
T ss_dssp             CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred             HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence            57777888888888888888888888888888887777766666653210                     113556778


Q ss_pred             CccHHHHHHhcCcHHHHHHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---H
Q 037410           70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---Q  145 (161)
Q Consensus        70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~  145 (161)
                      |.||||+|+..|+.+++++|++.|++ ++.++. .|.||||+|+..++.+++++|+++|++++.+|..|+||++++   +
T Consensus       117 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~  195 (236)
T 1ikn_D          117 GHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP  195 (236)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence            99999999999999999999999998 778887 999999999999999999999999999999999999999985   4


Q ss_pred             hHHHHHHHHhhh
Q 037410          146 CTFILLSLTRYS  157 (161)
Q Consensus       146 ~~~~~~~l~~~~  157 (161)
                      ...+.+.|..+.
T Consensus       196 ~~~~~~~Ll~~g  207 (236)
T 1ikn_D          196 STRIQQQLGQLT  207 (236)
T ss_dssp             CHHHHHHHHTTS
T ss_pred             chHHHHHHHHcc
Confidence            556666666554

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.94  E-value=1e-26  Score=161.16  Aligned_cols=139  Identities=22%  Similarity=0.177  Sum_probs=112.9

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------hhh------------
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------QMI------------   63 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~------------   63 (161)
                      |...+++++.+|..|+||||+|+..|+.+++++|+++|.+++..+..+.+++....         ..+            
T Consensus        92 Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~  171 (299)
T 1s70_B           92 LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK  171 (299)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             HHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh
Confidence            33456777777777888888888888888888888877777766666655543210         000            


Q ss_pred             ---------------------hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHH
Q 037410           64 ---------------------RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE  122 (161)
Q Consensus        64 ---------------------~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~  122 (161)
                                           ...+..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++
T Consensus       172 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~  250 (299)
T 1s70_B          172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRI  250 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             hhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHH
Confidence                                 01345799999999999999999999999988 88999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCcccchHHHH
Q 037410          123 LLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus       123 Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      |+++|++++.+|..|+||+++|
T Consensus       251 Ll~~gad~~~~d~~g~t~l~~A  272 (299)
T 1s70_B          251 LVENLCDMEAVNKVGQTAFDVA  272 (299)
T ss_dssp             HHHTTCCTTCCCTTSCCTTTSC
T ss_pred             HHHcCCCCCCcCCCCCCHHHHH
Confidence            9999999999999999999986

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.94  E-value=1e-26  Score=156.46  Aligned_cols=153  Identities=14%  Similarity=0.173  Sum_probs=125.1

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhH----hhhcCCCCCCCccchh---------------hhhhh
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK----IAQHGDGEPESGIGAD---------------RQMIR   64 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~~~~~~~~---------------~~~~~   64 (161)
                      +|...+..++.+|..|+||||+|+..|+.+++++|++.+.    .++..+..+..++...               ...++
T Consensus        64 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~  143 (241)
T 1k1a_A           64 LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID  143 (241)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred             HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence            3445678888888899999999999999999999999887    5555555555554321               12233


Q ss_pred             hhc-CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           65 MAN-NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        65 ~~~-~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      ..+ ..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+++
T Consensus       144 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~  222 (241)
T 1k1a_A          144 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV  222 (241)
T ss_dssp             CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTT
T ss_pred             cccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence            445 6799999999999999999999999998 88999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHhhh
Q 037410          144 QQCTFILLSLTRYS  157 (161)
Q Consensus       144 ~~~~~~~~~l~~~~  157 (161)
                      |........+....
T Consensus       223 A~~~~~~~i~~~l~  236 (241)
T 1k1a_A          223 ARSRRVIDILRGKA  236 (241)
T ss_dssp             CSSHHHHHHHTC--
T ss_pred             HHhcCcHHHHhhhc
Confidence            77766666655443

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.94  E-value=1.2e-25  Score=154.21  Aligned_cols=121  Identities=24%  Similarity=0.289  Sum_probs=105.1

Q ss_pred             ccCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhh----hhhcCCCccHHHHHHhcCcHHHH
Q 037410           14 NVNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMI----RMANNEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~t~l~~a~~~~~~~~~   86 (161)
                      ..|..|+||||+|+..   |+.+++++|++.|+.....           ...+    ...+..|.||||+|+..|+.+++
T Consensus        49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~-----------~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v  117 (273)
T 2pnn_A           49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL-----------KQFVNASYTDSYYKGQTALHIAIERRNMTLV  117 (273)
T ss_dssp             SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH-----------HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHH
T ss_pred             ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch-----------hHHhhcccccccCCCCCHHHHHHHcCCHHHH
Confidence            4588999999999987   9999999999999864320           0011    12467899999999999999999


Q ss_pred             HHHHHcCCCCccccCC--------------CCCcHHHHHHhCCChHHHHHHHh---cCCCCCCCCCcccchHHHHHh
Q 037410           87 KILTKQGPDNPYSANN--------------YGKTPLYMAAKGRYSEMVIELLE---TAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~--------------~~~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      ++|++.|++ ++..+.              .|.||||+|+..|+.+++++|++   +|++++.+|..|+||||++..
T Consensus       118 ~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~  193 (273)
T 2pnn_A          118 TLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVE  193 (273)
T ss_dssp             HHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHH
Confidence            999999998 777776              79999999999999999999999   999999999999999999765

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.94  E-value=1e-26  Score=147.37  Aligned_cols=114  Identities=18%  Similarity=0.198  Sum_probs=85.1

Q ss_pred             ccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH
Q 037410           12 LLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK   91 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~   91 (161)
                      .+..+..|.||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+ .|+.+++++|++
T Consensus         5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~-~~~~~~v~~Ll~   65 (156)
T 1bi7_B            5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNA------------------PNSYGRRPIQVMM-MGSARVAELLLL   65 (156)
T ss_dssp             -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTC------------------CCSSSCCTTTSSC-TTCHHHHHHHHT
T ss_pred             ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHH-cCCHHHHHHHHH
Confidence            345677899999999999999999999999887665                  5667777777764 677777777777


Q ss_pred             cCCCCccccCCCCCc-HHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           92 QGPDNPYSANNYGKT-PLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        92 ~g~~~~~~~~~~~~t-~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      .|++ ++.++..|.| |||+|+..++.+++++|+++|++++.+|..|+||+|++.
T Consensus        66 ~g~~-~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~  119 (156)
T 1bi7_B           66 HGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE  119 (156)
T ss_dssp             TTCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHH
T ss_pred             cCCC-CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            7766 6677777777 777777777777777777777777777777777777753

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.94  E-value=3.1e-26  Score=158.29  Aligned_cols=95  Identities=17%  Similarity=0.117  Sum_probs=68.1

Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM  142 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  142 (161)
                      ++..+..|.||||+|+..|+.+++++|++.|++ ++ .+..|.||||+|++.++.+++++|+++|++++.+|..|+||++
T Consensus       183 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~  260 (285)
T 3d9h_A          183 IDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVE  260 (285)
T ss_dssp             TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred             CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence            345566777888888888888888888877776 44 3677778888888888888888888888888888888888887


Q ss_pred             HHH-hHHHHHHHHhhhCC
Q 037410          143 LQQ-CTFILLSLTRYSGI  159 (161)
Q Consensus       143 ~~~-~~~~~~~l~~~~~~  159 (161)
                      ++. ...+...|.++.+.
T Consensus       261 ~A~~~~~~~~~Ll~~~~a  278 (285)
T 3d9h_A          261 LVPPESPLAQLFLEREGA  278 (285)
T ss_dssp             GSCTTSHHHHHHHHHC--
T ss_pred             HhcCccHHHHHHHHhhcc
Confidence            742 34555666655443

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.94  E-value=3.4e-27  Score=153.74  Aligned_cols=126  Identities=12%  Similarity=0.034  Sum_probs=107.7

Q ss_pred             ccccC-CCCCcHHHHHHHhCCH----HHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc----
Q 037410           12 LLNVN-AKGDTPLRVAAKFGHS----DIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN----   82 (161)
Q Consensus        12 ~~~~~-~~g~t~lh~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~----   82 (161)
                      .+.++ ..|+||||+|+..|+.    +++++|++.|++++.                  ++..|.||||+|+..++    
T Consensus        30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~------------------~d~~g~TpLh~a~~~~~~~~~   91 (186)
T 3t8k_A           30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS------------------RTKEGTTLFFPLFQGGGNDIT   91 (186)
T ss_dssp             SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC------------------CCTTCCCTHHHHHHHCTTCHH
T ss_pred             cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHHHcCCcchh
Confidence            44555 6799999999999975    589999999999665                  78999999999998886    


Q ss_pred             --HHHHHHHHHcCCCCccccCCCCC-cHHHHHHhCCC-----hHHHHHHHh-cCCCCCCCCCcccchHHHHH---hHHHH
Q 037410           83 --VHVVKILTKQGPDNPYSANNYGK-TPLYMAAKGRY-----SEMVIELLE-TAHQCPMKAPTERQLCMLQQ---CTFIL  150 (161)
Q Consensus        83 --~~~~~~L~~~g~~~~~~~~~~~~-t~l~~A~~~~~-----~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~---~~~~~  150 (161)
                        .+++++|++.|++ ++.+|..|. ||||+|+..+.     .+++++|++ +|++++.+|..|+||+|++.   .....
T Consensus        92 ~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v  170 (186)
T 3t8k_A           92 GTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL  170 (186)
T ss_dssp             HHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred             hHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence              6889999999998 899999999 99999999654     458999999 99999999999999999963   34455


Q ss_pred             HHHHhh
Q 037410          151 LSLTRY  156 (161)
Q Consensus       151 ~~l~~~  156 (161)
                      +.|..|
T Consensus       171 ~~L~~~  176 (186)
T 3t8k_A          171 KMMEDY  176 (186)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555554

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.94  E-value=9e-26  Score=151.30  Aligned_cols=139  Identities=15%  Similarity=0.096  Sum_probs=115.4

Q ss_pred             cccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc
Q 037410           13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ   92 (161)
Q Consensus        13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~   92 (161)
                      +.+|..|+||||+|+..|+.+++++|++.|.+++..+......     ...+..+..|.||||+|+..|+.+++++|++.
T Consensus        69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  143 (232)
T 2rfa_A           69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFH-----YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH  143 (232)
T ss_dssp             CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT
T ss_pred             cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCccee-----ecccccccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            5667799999999999999999999999999877643221110     11233466899999999999999999999999


Q ss_pred             CCCCccccCCCCCcHHHHHHhCCChHHH----HHHHhcCCCC------CCCCCcccchHHHHH---hHHHHHHHHhhh
Q 037410           93 GPDNPYSANNYGKTPLYMAAKGRYSEMV----IELLETAHQC------PMKAPTERQLCMLQQ---CTFILLSLTRYS  157 (161)
Q Consensus        93 g~~~~~~~~~~~~t~l~~A~~~~~~~~~----~~Ll~~g~~~------~~~~~~~~t~l~~~~---~~~~~~~l~~~~  157 (161)
                      |++ ++.+|..|.||||+|+..++.+++    ++|+++|++.      +.+|..|+||+++|.   ...+.+.|.++.
T Consensus       144 ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g  220 (232)
T 2rfa_A          144 GAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR  220 (232)
T ss_dssp             TCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred             CCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            998 889999999999999999999988    9999999988      589999999999964   455666666554

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.94  E-value=4.6e-26  Score=157.43  Aligned_cols=120  Identities=18%  Similarity=0.201  Sum_probs=79.3

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      .++|...  .++.+|..|+||||+|+..|+.+++++|++.|.+++..                    +|.||||+|+..|
T Consensus        16 ~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--------------------~g~t~L~~A~~~g   73 (285)
T 3kea_A           16 KSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--------------------ENEFPLHQAATLE   73 (285)
T ss_dssp             HHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--------------------TTCCHHHHHTTSS
T ss_pred             HHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--------------------CCCCHHHHHHHcC
Confidence            4555544  57899999999999999999999999999999987653                    2455555555555


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcc-cchHHHH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTE-RQLCMLQ  144 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~t~l~~~  144 (161)
                      +.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.++..| +||+|++
T Consensus        74 ~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A  136 (285)
T 3kea_A           74 DTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHA  136 (285)
T ss_dssp             SCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHH
T ss_pred             CHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHH
Confidence            55555555555554 44555555555555555555555555555555555555555 4555553

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.94  E-value=9e-26  Score=153.72  Aligned_cols=131  Identities=21%  Similarity=0.208  Sum_probs=108.5

Q ss_pred             hCCccccccC----CCCCcHHHHHH---HhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh
Q 037410            7 LCPSLLLNVN----AKGDTPLRVAA---KFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC   79 (161)
Q Consensus         7 ~~~~~~~~~~----~~g~t~lh~A~---~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~   79 (161)
                      ..+..++..+    ..|+||||+|+   ..|+.+++++|++.|.......       ..........+..|.||||+|+.
T Consensus        30 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~-------~~~~~~~~~~d~~g~t~L~~A~~  102 (260)
T 3jxi_A           30 THKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR-------EFINSPFRDVYYRGQTALHIAIE  102 (260)
T ss_dssp             HHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH-------HHHTCCBCCSSEESBCHHHHHHH
T ss_pred             hcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH-------hhhcccccccccCCCCHHHHHHH
Confidence            3455666555    77999999999   7899999999999998743200       00001122345689999999999


Q ss_pred             cCcHHHHHHHHHcCCCCccccC--------------CCCCcHHHHHHhCCChHHHHHHHh---cCCCCCCCCCcccchHH
Q 037410           80 HGNVHVVKILTKQGPDNPYSAN--------------NYGKTPLYMAAKGRYSEMVIELLE---TAHQCPMKAPTERQLCM  142 (161)
Q Consensus        80 ~~~~~~~~~L~~~g~~~~~~~~--------------~~~~t~l~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~l~  142 (161)
                      .|+.+++++|++.|++ ++..+              ..|.||||+|+..|+.+++++|++   +|++++.+|..|+||||
T Consensus       103 ~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh  181 (260)
T 3jxi_A          103 RRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLH  181 (260)
T ss_dssp             TTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred             cCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHH
Confidence            9999999999999998 77777              689999999999999999999999   99999999999999999


Q ss_pred             HHH
Q 037410          143 LQQ  145 (161)
Q Consensus       143 ~~~  145 (161)
                      ++.
T Consensus       182 ~A~  184 (260)
T 3jxi_A          182 ALV  184 (260)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            976

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.94  E-value=8.2e-26  Score=131.42  Aligned_cols=93  Identities=34%  Similarity=0.524  Sum_probs=86.3

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      +|+||||+|+..|+.+++++|++.|.+++.                  ++..|.||||+|+..++.+++++|++.|++ +
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~   61 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-V   61 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence            489999999999999999999999988654                  788999999999999999999999999998 8


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      +.+|..|.||||+|+..++.+++++|+++|++
T Consensus        62 ~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            89999999999999999999999999999974

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.93  E-value=2.1e-26  Score=149.59  Aligned_cols=111  Identities=23%  Similarity=0.202  Sum_probs=102.2

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +..|+||||+|+..|+.+++++|++ |.+++                  .++..|.||||+|+..|+.+++++|++.|++
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  101 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVD------------------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD  101 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            5578999999999999999999999 76644                  3788999999999999999999999999998


Q ss_pred             CccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410           96 NPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus        96 ~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                       ++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++..
T Consensus       102 -~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~  152 (183)
T 3deo_A          102 -LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE  152 (183)
T ss_dssp             -TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred             -CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence             77777 889999999999999999999999999999999999999998743

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.93  E-value=1.1e-25  Score=158.63  Aligned_cols=128  Identities=20%  Similarity=0.202  Sum_probs=117.6

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.++...+..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..|
T Consensus        41 ~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~g  102 (351)
T 3utm_A           41 MALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA------------------KDKGGLVPLHNACSYG  102 (351)
T ss_dssp             HHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTT
T ss_pred             HHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCcHHHHHHHCC
Confidence            4667777888999999999999999999999999999999988654                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF  148 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~  148 (161)
                      +.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.+|++++....
T Consensus       103 ~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~  168 (351)
T 3utm_A          103 HYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE  168 (351)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHH
T ss_pred             CHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhh
Confidence            99999999999998 7889999999999999999999999999999999999999999999854433

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.93  E-value=5.1e-26  Score=154.68  Aligned_cols=136  Identities=16%  Similarity=0.067  Sum_probs=111.0

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH---
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK---   91 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~---   91 (161)
                      +|..|+||||+|+..|+.+++++|++.|++++..+......     ......+..|.||||+|+..|+.+++++|++   
T Consensus        86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~-----~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~  160 (256)
T 2etb_A           86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ-----KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH  160 (256)
T ss_dssp             TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred             ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc-----ccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence            34679999999999999999999999999877643221100     0011123349999999999999999999999   


Q ss_pred             cCCCCccccCCCCCcHHHHHHh--CCChH-------HHHHHHhcCCCC-------CCCCCcccchHHHHH---hHHHHHH
Q 037410           92 QGPDNPYSANNYGKTPLYMAAK--GRYSE-------MVIELLETAHQC-------PMKAPTERQLCMLQQ---CTFILLS  152 (161)
Q Consensus        92 ~g~~~~~~~~~~~~t~l~~A~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~~~t~l~~~~---~~~~~~~  152 (161)
                      .|++ ++.+|..|.||||+|+.  .++.+       ++++|+++|+++       +.+|..|+||+|+|.   ...+.+.
T Consensus       161 ~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~  239 (256)
T 2etb_A          161 QPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRH  239 (256)
T ss_dssp             CCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             cCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHH
Confidence            8888 88999999999999999  78888       999999999999       899999999999964   4455666


Q ss_pred             HHhh
Q 037410          153 LTRY  156 (161)
Q Consensus       153 l~~~  156 (161)
                      |.++
T Consensus       240 Ll~~  243 (256)
T 2etb_A          240 ILQR  243 (256)
T ss_dssp             HHHH
T ss_pred             HHhC
Confidence            6554

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.93  E-value=3.1e-26  Score=154.60  Aligned_cols=129  Identities=23%  Similarity=0.156  Sum_probs=106.4

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHH
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~   86 (161)
                      ..++.++. +..|.||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..|+.+++
T Consensus        26 ~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~g~~~~v   86 (239)
T 1ycs_B           26 AHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL------------------PNDEGITALHNAVCAGHTEIV   86 (239)
T ss_dssp             ------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC------------------CCTTSCCHHHHHHHHTCHHHH
T ss_pred             ccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHH
Confidence            44555554 47789999999999999999999999987554                  788999999999999999999


Q ss_pred             HHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCccc-chHHHH-----HhHHHHHHHHh
Q 037410           87 KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER-QLCMLQ-----QCTFILLSLTR  155 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-t~l~~~-----~~~~~~~~l~~  155 (161)
                      ++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.++..|. ||+|++     +...+.+.|..
T Consensus        87 ~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~  160 (239)
T 1ycs_B           87 KFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  160 (239)
T ss_dssp             HHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             HHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence            999999998 889999999999999999999999999999999999998887 999986     33445555544

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.93  E-value=9.3e-27  Score=147.58  Aligned_cols=121  Identities=16%  Similarity=0.190  Sum_probs=95.6

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCcc-HHHHHHhcC
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNT-ALHEAVCHG   81 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t-~l~~a~~~~   81 (161)
                      .|+ ..+..++.+|..|+||||+|+ .|+.+++++|++.|.+++.                  ++..|.| |||+|+..|
T Consensus        30 ~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------------------~d~~g~ttpL~~A~~~~   89 (156)
T 1bi7_B           30 ALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------------------ADPATLTRPVHDAAREG   89 (156)
T ss_dssp             HHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------------------CCTTTCCCHHHHHHHHT
T ss_pred             HHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHHCC
Confidence            344 457889999999999999985 9999999999999987554                  7888998 999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      +.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.++..|.||.+.+
T Consensus        90 ~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B           90 FLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             CHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred             CHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence            99999999999998 889999999999999999999999999999999999999999998743

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.93  E-value=2.3e-26  Score=138.72  Aligned_cols=109  Identities=28%  Similarity=0.322  Sum_probs=100.3

Q ss_pred             ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410           14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG   93 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g   93 (161)
                      .+|.+|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++.+++++|++.|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g   65 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA------------------RSKDGNTPLHLAAKNGHAEIVKLLLAKG   65 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC------------------CCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence            5788999999999999999999999999887554                  7889999999999999999999999999


Q ss_pred             CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchH
Q 037410           94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLC  141 (161)
Q Consensus        94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l  141 (161)
                      ++ ++.++..|.|||++|+..++.+++++|+++|++++.++..+.+|-
T Consensus        66 ~~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           66 AD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             CC-TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             CC-CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            98 888999999999999999999999999999999999999999875

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.93  E-value=3.8e-26  Score=155.59  Aligned_cols=140  Identities=18%  Similarity=0.100  Sum_probs=111.0

Q ss_pred             ccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH
Q 037410           12 LLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK   91 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~   91 (161)
                      .+..|..|+||||+|+..|+.+++++|++.|++++..+.....    ........+..|.||||+|+..|+.+++++|++
T Consensus        86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~  161 (260)
T 3jxi_A           86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFF----QPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE  161 (260)
T ss_dssp             BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCC----SSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred             ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccccc----CcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence            4455668999999999999999999999999987763210000    000001112679999999999999999999999


Q ss_pred             ---cCCCCccccCCCCCcHHHHHHhCCC---------hHHHHHHHhcCCCC-------CCCCCcccchHHHHH---hHHH
Q 037410           92 ---QGPDNPYSANNYGKTPLYMAAKGRY---------SEMVIELLETAHQC-------PMKAPTERQLCMLQQ---CTFI  149 (161)
Q Consensus        92 ---~g~~~~~~~~~~~~t~l~~A~~~~~---------~~~~~~Ll~~g~~~-------~~~~~~~~t~l~~~~---~~~~  149 (161)
                         .|++ ++.+|..|.||||+|+..++         .+++++|+++|+++       +.+|..|+||||+|.   ...+
T Consensus       162 ~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~  240 (260)
T 3jxi_A          162 NGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI  240 (260)
T ss_dssp             CSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred             ccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence               8888 88999999999999998777         68999999999988       679999999999964   4455


Q ss_pred             HHHHHhh
Q 037410          150 LLSLTRY  156 (161)
Q Consensus       150 ~~~l~~~  156 (161)
                      .+.|.+.
T Consensus       241 v~~Ll~~  247 (260)
T 3jxi_A          241 FQHIIRR  247 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555543

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.93  E-value=3.8e-26  Score=153.61  Aligned_cols=144  Identities=18%  Similarity=0.178  Sum_probs=113.0

Q ss_pred             cccCCCCCcHHHHHHHhCCHHHHHHHHHhhH----hhhcCCCCCCCccchh---------------hhhhhhhcCCCccH
Q 037410           13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQTAK----IAQHGDGEPESGIGAD---------------RQMIRMANNEKNTA   73 (161)
Q Consensus        13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~   73 (161)
                      +.+|.+|+||||+|+..|+.+++++|++.+.    .++..+..+.++++..               +..++.++..|.||
T Consensus         2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~   81 (236)
T 1ikn_D            2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP   81 (236)
T ss_dssp             -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred             CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence            3578999999999999999999999999876    4566666666665332               23355678889999


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCC-----ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC-cccchHHHHH--
Q 037410           74 LHEAVCHGNVHVVKILTKQGPDN-----PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP-TERQLCMLQQ--  145 (161)
Q Consensus        74 l~~a~~~~~~~~~~~L~~~g~~~-----~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~l~~~~--  145 (161)
                      ||+|+..|+.+++++|++.++..     .+..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||++.  
T Consensus        82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~  161 (236)
T 1ikn_D           82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL  161 (236)
T ss_dssp             HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence            99999999999999999998642     456788899999999999999999999999999999998 9999999964  


Q ss_pred             -hHHHHHHHHhh
Q 037410          146 -CTFILLSLTRY  156 (161)
Q Consensus       146 -~~~~~~~l~~~  156 (161)
                       ...+.+.|.++
T Consensus       162 ~~~~~v~~Ll~~  173 (236)
T 1ikn_D          162 QNPDLVSLLLKC  173 (236)
T ss_dssp             TCHHHHHHHHTT
T ss_pred             CCHHHHHHHHHc
Confidence             35556665554

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.93  E-value=3.4e-25  Score=160.93  Aligned_cols=152  Identities=21%  Similarity=0.220  Sum_probs=127.7

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANN   68 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~   68 (161)
                      +|...+..++..+..|.||||+|+..|+.+++++|++.+.+++..+..+.+++...               ...++..+.
T Consensus       230 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~  309 (437)
T 1n11_A          230 SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR  309 (437)
T ss_dssp             HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC
Confidence            34456677888888999999999999999999999999888887777776665432               223456788


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh--
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC--  146 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~--  146 (161)
                      .|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||++++..  
T Consensus       310 ~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g  388 (437)
T 1n11_A          310 MGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLG  388 (437)
T ss_dssp             SCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence            899999999999999999999999998 88999999999999999999999999999999999999999999999643  


Q ss_pred             -HHHHHHHHhh
Q 037410          147 -TFILLSLTRY  156 (161)
Q Consensus       147 -~~~~~~l~~~  156 (161)
                       ..+...|...
T Consensus       389 ~~~~~~~l~~~  399 (437)
T 1n11_A          389 YISVTDVLKVV  399 (437)
T ss_dssp             CHHHHHHHHHH
T ss_pred             cHHHHHHHHhc
Confidence             3455555443

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.93  E-value=8.3e-26  Score=155.01  Aligned_cols=138  Identities=19%  Similarity=0.133  Sum_probs=112.0

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH---
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK---   91 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~---   91 (161)
                      .|..|+||||+|+..|+.+++++|++.|++++..+.....    ........+..|.||||+|+..|+.+++++|++   
T Consensus        97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~  172 (273)
T 2pnn_A           97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF----KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW  172 (273)
T ss_dssp             TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGG----SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred             ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccc----ccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence            5678999999999999999999999999987764321100    000011223479999999999999999999999   


Q ss_pred             cCCCCccccCCCCCcHHHHHHhCCC---------hHHHHHHHhcCCCCC-------CCCCcccchHHHH---HhHHHHHH
Q 037410           92 QGPDNPYSANNYGKTPLYMAAKGRY---------SEMVIELLETAHQCP-------MKAPTERQLCMLQ---QCTFILLS  152 (161)
Q Consensus        92 ~g~~~~~~~~~~~~t~l~~A~~~~~---------~~~~~~Ll~~g~~~~-------~~~~~~~t~l~~~---~~~~~~~~  152 (161)
                      .|++ ++.+|..|.||||+|+..++         .+++++|+++|++++       .+|..|+||||+|   +...+.+.
T Consensus       173 ~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~  251 (273)
T 2pnn_A          173 QPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY  251 (273)
T ss_dssp             CCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             CCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence            8888 88999999999999999888         799999999999986       4899999999996   45556666


Q ss_pred             HHhhh
Q 037410          153 LTRYS  157 (161)
Q Consensus       153 l~~~~  157 (161)
                      |.++.
T Consensus       252 Ll~~g  256 (273)
T 2pnn_A          252 ILQRE  256 (273)
T ss_dssp             HHHHH
T ss_pred             HHHCC
Confidence            66554

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.93  E-value=3.7e-25  Score=155.99  Aligned_cols=80  Identities=20%  Similarity=0.167  Sum_probs=60.7

Q ss_pred             hhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           64 RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        64 ~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      +.++..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++
T Consensus       241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~  319 (351)
T 3utm_A          241 NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQM  319 (351)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence            34566677777777777777777777777776 67777777777777777777777777777777777777777777777


Q ss_pred             H
Q 037410          144 Q  144 (161)
Q Consensus       144 ~  144 (161)
                      +
T Consensus       320 a  320 (351)
T 3utm_A          320 G  320 (351)
T ss_dssp             S
T ss_pred             h
Confidence            5

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.93  E-value=4.1e-25  Score=153.10  Aligned_cols=135  Identities=22%  Similarity=0.194  Sum_probs=111.0

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++. +.+++..|..|+||||+|+..|+.+++++|++.|++++.                  .+..|.||||+|+..|
T Consensus        57 ~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~tpL~~A~~~g  117 (299)
T 1s70_B           57 LRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ------------------PDNEGWIPLHAAASCG  117 (299)
T ss_dssp             HHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHT
T ss_pred             HHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHHHcC
Confidence            345544 577889999999999999999999999999999988665                  5677888888888888


Q ss_pred             cHHHHHHHHHcCCCCcccc------------------------------------------------------------C
Q 037410           82 NVHVVKILTKQGPDNPYSA------------------------------------------------------------N  101 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~------------------------------------------------------------~  101 (161)
                      +.+++++|++.|++ ++..                                                            +
T Consensus       118 ~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  196 (299)
T 1s70_B          118 YLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA  196 (299)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred             CHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence            88888888888765 3333                                                            3


Q ss_pred             CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410          102 NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus       102 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|.   ...+...|..+
T Consensus       197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  254 (299)
T 1s70_B          197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN  254 (299)
T ss_dssp             TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence            45789999999999999999999999999999999999999963   44555555554

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.93  E-value=8.5e-26  Score=152.91  Aligned_cols=110  Identities=23%  Similarity=0.213  Sum_probs=101.6

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCC
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD   95 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~   95 (161)
                      +..|.||||+|+..|+.+++++|++ |.+++.                  ++..|.||||+|+..|+.+++++|++.|++
T Consensus        42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~------------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~  102 (244)
T 3ui2_A           42 VSEYETPWWTAARKADEQALSQLLE-DRDVDA------------------VDENGRTALLFVAGLGSDKCVRLLAEAGAD  102 (244)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTC------------------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCC------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            4578999999999999999999999 766544                  788999999999999999999999999998


Q ss_pred             CccccC-CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           96 NPYSAN-NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        96 ~~~~~~-~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                       ++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++.
T Consensus       103 -~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~  152 (244)
T 3ui2_A          103 -LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR  152 (244)
T ss_dssp             -TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             -CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence             67777 78999999999999999999999999999999999999999874

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.93  E-value=4.6e-25  Score=141.04  Aligned_cols=120  Identities=18%  Similarity=0.207  Sum_probs=108.1

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      .|.||||+|+..|+.+++++|++.+..++.                  .+..|.||||+|+..|+.+++++|++.|++ +
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~   62 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINH------------------TDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-P   62 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-C
Confidence            589999999999999999999999877544                  788999999999999999999999999988 7


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      +..+..|.||||+|+..++.+++++|+++|++++.++..|+||+|++.   ...+.+.|.++
T Consensus        63 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  124 (167)
T 3v31_A           63 QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES  124 (167)
T ss_dssp             TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            889999999999999999999999999999999999999999999964   34455555543

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.93  E-value=7.4e-25  Score=151.35  Aligned_cols=148  Identities=18%  Similarity=0.164  Sum_probs=114.5

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------hhhh-----hhcCCCcc
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------QMIR-----MANNEKNT   72 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~~g~t   72 (161)
                      ..+..++.+|..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...-         .++.     ..+..|.|
T Consensus        80 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t  159 (285)
T 3d9h_A           80 SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS  159 (285)
T ss_dssp             HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSC
T ss_pred             HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCC
Confidence            456778888889999999999999999999999998888877777666654321         1111     12345788


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHH
Q 037410           73 ALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFI  149 (161)
Q Consensus        73 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~  149 (161)
                      |||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++. +..|+||||++   +...+
T Consensus       160 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~  237 (285)
T 3d9h_A          160 PIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEEL  237 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHH
Confidence            89999888899999999888887 778888888999999999999999999998888884 78888999886   34455


Q ss_pred             HHHHHhh
Q 037410          150 LLSLTRY  156 (161)
Q Consensus       150 ~~~l~~~  156 (161)
                      .+.|..+
T Consensus       238 v~~Ll~~  244 (285)
T 3d9h_A          238 ACLLMDF  244 (285)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHC
Confidence            5555554

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.93  E-value=8.6e-25  Score=146.88  Aligned_cols=151  Identities=17%  Similarity=0.091  Sum_probs=120.1

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------h-hhhhhhcC
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------R-QMIRMANN   68 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~   68 (161)
                      |...+..++..+..|+||||+|+..|+.+++++|++.|..++..+..+..++...               . ...+..+.
T Consensus        30 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~  109 (237)
T 3b7b_A           30 LVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD  109 (237)
T ss_dssp             HHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT
T ss_pred             HHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC
Confidence            3445778888889999999999999999999999999888877776666655321               0 22445567


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh--
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC--  146 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~--  146 (161)
                      .|.||||+|+..++.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|++..  
T Consensus       110 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  188 (237)
T 3b7b_A          110 GGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAAREN  188 (237)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence            788999999999999999999998887 77888889999999999999999999999999999999999999998643  


Q ss_pred             -HHHHHHHHhh
Q 037410          147 -TFILLSLTRY  156 (161)
Q Consensus       147 -~~~~~~l~~~  156 (161)
                       ..+...|.++
T Consensus       189 ~~~~v~~Ll~~  199 (237)
T 3b7b_A          189 RYDCVVLFLSR  199 (237)
T ss_dssp             CHHHHHHHHTT
T ss_pred             CHhHHHHHHHc
Confidence             3444444443

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.93  E-value=8e-25  Score=156.38  Aligned_cols=138  Identities=21%  Similarity=0.220  Sum_probs=86.6

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------h---hhhhhhc-
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------R---QMIRMAN-   67 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~---~~~~~~~-   67 (161)
                      ..+++++.+|..|+||||+|+..|+.+++++|++.|++++..+..+.+++...               .   ..++..+ 
T Consensus       154 ~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~  233 (373)
T 2fo1_E          154 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR  233 (373)
T ss_dssp             HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT
T ss_pred             hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC
Confidence            56777788888888888888888888888888888877776655554443211               0   1122223 


Q ss_pred             -------------------------------------------CCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCC
Q 037410           68 -------------------------------------------NEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYG  104 (161)
Q Consensus        68 -------------------------------------------~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~  104 (161)
                                                                 ..|.||||+|+..|+.+++++|++.+..+++.+|..|
T Consensus       234 ~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g  313 (373)
T 2fo1_E          234 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG  313 (373)
T ss_dssp             TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC
T ss_pred             CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCC
Confidence                                                       3455666666666666666666655422255566666


Q ss_pred             CcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410          105 KTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus       105 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      .||||+|+..|+.+++++|+++|++++.+|..|+||+++|
T Consensus       314 ~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A  353 (373)
T 2fo1_E          314 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA  353 (373)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence            6666666666666666666666666666666666666664

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.92  E-value=1e-24  Score=155.86  Aligned_cols=120  Identities=14%  Similarity=0.116  Sum_probs=91.5

Q ss_pred             ccccccCCCCCcHHHHHHHhC---CHHHHHHHHHhhHhhhc--------CCCCCCCccchh----------------hhh
Q 037410           10 SLLLNVNAKGDTPLRVAAKFG---HSDIVSVLVQTAKIAQH--------GDGEPESGIGAD----------------RQM   62 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g---~~~~v~~Ll~~~~~~~~--------~~~~~~~~~~~~----------------~~~   62 (161)
                      ..++..|..|+||||+|+..+   +.+++++|++.|.+++.        .+..+.++++..                ...
T Consensus       226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~  305 (373)
T 2fo1_E          226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN  305 (373)
T ss_dssp             HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred             cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence            455666667777777777766   66777777777766554        233344444221                134


Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCC
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC  130 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~  130 (161)
                      ++.++..|.||||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..|+.+++++|++++++.
T Consensus       306 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~  372 (373)
T 2fo1_E          306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCRPER  372 (373)
T ss_dssp             TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred             ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence            556788999999999999999999999999998 8899999999999999999999999999998753

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.92  E-value=4.2e-25  Score=157.11  Aligned_cols=124  Identities=18%  Similarity=0.237  Sum_probs=112.2

Q ss_pred             cCCCCCcHHHHHHHhC--CHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc
Q 037410           15 VNAKGDTPLRVAAKFG--HSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ   92 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~   92 (161)
                      +|..|+||||+|+..|  +.+++++|++.|++++.                  .+..|.||||+|+..|+.+++++|++.
T Consensus       134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~------------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~  195 (364)
T 3ljn_A          134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA------------------KDKADETPLMRAMEFRNREALDLMMDT  195 (364)
T ss_dssp             EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            7889999999999999  99999999999988654                  788999999999999999999999999


Q ss_pred             CCCC----ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhh
Q 037410           93 GPDN----PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRY  156 (161)
Q Consensus        93 g~~~----~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~  156 (161)
                      |++.    ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|   +...+.+.|.+.
T Consensus       196 g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~  266 (364)
T 3ljn_A          196 VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK  266 (364)
T ss_dssp             CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence            8763    577889999999999999999999999999999999999999999996   445566666655

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=3.4e-24  Score=147.08  Aligned_cols=135  Identities=20%  Similarity=0.180  Sum_probs=115.1

Q ss_pred             hhHHHhCCcccccc-CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410            2 EEILELCPSLLLNV-NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH   80 (161)
Q Consensus         2 ~~ll~~~~~~~~~~-~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~   80 (161)
                      +.+++. +..++.. +..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..
T Consensus        22 ~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~   82 (285)
T 1wdy_A           22 QQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL------------------RKKNGATPFLLAAIA   82 (285)
T ss_dssp             HHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHH
T ss_pred             HHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHc
Confidence            445544 4566666 78899999999999999999999999887554                  678899999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCC----------CCcccchHHHHHh---H
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMK----------APTERQLCMLQQC---T  147 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~t~l~~~~~---~  147 (161)
                      |+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++..          +..|.||+|++..   .
T Consensus        83 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~  161 (285)
T 1wdy_A           83 GSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV  161 (285)
T ss_dssp             TCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred             CCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence            999999999999988 7888999999999999999999999999999999888          7889999998644   3


Q ss_pred             HHHHHHHhh
Q 037410          148 FILLSLTRY  156 (161)
Q Consensus       148 ~~~~~l~~~  156 (161)
                      .+.+.|...
T Consensus       162 ~~v~~Ll~~  170 (285)
T 1wdy_A          162 EVLKILLDE  170 (285)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            455555543

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.92  E-value=6.4e-25  Score=151.70  Aligned_cols=136  Identities=17%  Similarity=0.132  Sum_probs=94.8

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCC-ccHHHHHHhcCc
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEK-NTALHEAVCHGN   82 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g-~t~l~~a~~~~~   82 (161)
                      |+||||+|+..|+.+++++|++.|++++..+..+.++++..               ...++..+..| .||||+|+..|+
T Consensus        62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~  141 (285)
T 3kea_A           62 NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND  141 (285)
T ss_dssp             TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC
Confidence            45555555555555555555555555444444443333211               12244577788 799999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccch-HHHHH---hHHHHHHHHhh
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQL-CMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~-l~~~~---~~~~~~~l~~~  156 (161)
                      .+++++|++.|++..  ....|.||||+|+..|+.+++++|+++|++++.++..|+|| +|+|.   ...+.+.|.++
T Consensus       142 ~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~  217 (285)
T 3kea_A          142 VSIVSYFLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY  217 (285)
T ss_dssp             HHHHHHHHTTSCTTC--CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred             HHHHHHHHhCCCccc--cccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence            999999999997732  12288999999999999999999999999999999999998 99864   34455555443

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.92  E-value=1.9e-24  Score=153.73  Aligned_cols=151  Identities=19%  Similarity=0.194  Sum_probs=122.4

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------hhhhhh-------
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------RQMIRM-------   65 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~~~~-------   65 (161)
                      +.|+ ..+.+++.+|..|+||||+|+..|+.+++++|++.|...+..  .+.+++...         ..++..       
T Consensus        37 ~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~  113 (364)
T 3ljn_A           37 RRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW--HGQKPIHLAVMANKTDLVVALVEGAKERGQM  113 (364)
T ss_dssp             HHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB--TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred             HHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc--CCCCHHHHHHHcCCHHHHHHHHHhccccCCC
Confidence            3444 457889999999999999999999999999999999854432  233333211         111221       


Q ss_pred             --------------------hcCCCccHHHHHHhcC--cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHH
Q 037410           66 --------------------ANNEKNTALHEAVCHG--NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL  123 (161)
Q Consensus        66 --------------------~~~~g~t~l~~a~~~~--~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L  123 (161)
                                          .+..|.||||+|+..|  +.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~L  192 (364)
T 3ljn_A          114 PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLM  192 (364)
T ss_dssp             HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence                                6778999999999999  99999999999998 889999999999999999999999999


Q ss_pred             HhcCCC-----CCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410          124 LETAHQ-----CPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus       124 l~~g~~-----~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      +++|++     ++..+..|+||||+|.   ...+.+.|..+
T Consensus       193 l~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  233 (364)
T 3ljn_A          193 MDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM  233 (364)
T ss_dssp             HHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred             HhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence            999999     9999999999999964   44555555543

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.92  E-value=1.1e-24  Score=139.72  Aligned_cols=123  Identities=24%  Similarity=0.243  Sum_probs=108.2

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP   94 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~   94 (161)
                      ....+.++|++|++.|+.+++++|++.|.+++.                  .+..|.||||+|+..|+.+++++|++.|+
T Consensus        10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~   71 (169)
T 2y1l_E           10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNA------------------EDASGWTPLHLAAFNGHLEIVEVLLKNGA   71 (169)
T ss_dssp             ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            455688999999999999999999999987554                  68899999999999999999999999998


Q ss_pred             CCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           95 DNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        95 ~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      + ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.   ...+.+.|.++
T Consensus        72 ~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  135 (169)
T 2y1l_E           72 D-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN  135 (169)
T ss_dssp             C-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             C-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            8 7889999999999999999999999999999999999999999999964   34455555543

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=2.5e-24  Score=156.37  Aligned_cols=152  Identities=22%  Similarity=0.157  Sum_probs=130.7

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcC
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANN   68 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~   68 (161)
                      +|...+...+.++..|+||||+|+..|+.+++++|++.|.+++..+..+.+++...               ....+..+.
T Consensus       197 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~  276 (437)
T 1n11_A          197 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNK  276 (437)
T ss_dssp             HHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT
T ss_pred             HHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCC
Confidence            34455677888899999999999999999999999999999888877776665432               122456678


Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---H
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---Q  145 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~  145 (161)
                      .|.||||+|+..|+.+++++|++.|.+ ++.++..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|   +
T Consensus       277 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g  355 (437)
T 1n11_A          277 SGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG  355 (437)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCC
Confidence            899999999999999999999999998 888999999999999999999999999999999999999999999996   3


Q ss_pred             hHHHHHHHHhh
Q 037410          146 CTFILLSLTRY  156 (161)
Q Consensus       146 ~~~~~~~l~~~  156 (161)
                      ...+.+.|.++
T Consensus       356 ~~~iv~~Ll~~  366 (437)
T 1n11_A          356 HTDIVTLLLKN  366 (437)
T ss_dssp             CHHHHHHHHHT
T ss_pred             hHHHHHHHHHC
Confidence            45566666654

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.92  E-value=1.8e-24  Score=137.57  Aligned_cols=108  Identities=24%  Similarity=0.178  Sum_probs=97.8

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      +|...+.+++.+|..|+||||+|+..|+.+++++|++.|.+++.                  ++..|.||||+|+..|+.
T Consensus        55 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~  116 (162)
T 1ihb_A           55 RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI------------------EDNEGNLPLHLAAKEGHL  116 (162)
T ss_dssp             HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCH
T ss_pred             HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCH
Confidence            34455788999999999999999999999999999999987554                  788999999999999999


Q ss_pred             HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      +++++|++.|++.++..+..|.|||++|+..++.+++++|+++|++
T Consensus       117 ~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          117 RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             HHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence            9999999999986688999999999999999999999999999975

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.92  E-value=3.4e-25  Score=142.32  Aligned_cols=118  Identities=19%  Similarity=0.135  Sum_probs=102.7

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN   82 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~   82 (161)
                      .|+ ..+.+++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++
T Consensus        54 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~  114 (172)
T 3v30_A           54 FLL-EWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI------------------YDWNGGTPLLYAVRGNH  114 (172)
T ss_dssp             HHH-HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTC
T ss_pred             HHH-HcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCC
Confidence            344 45688899999999999999999999999999999887554                  78899999999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccch
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQL  140 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~  140 (161)
                      .+++++|++.|++ ++.++..|.|||++|+..++.+++++|+++|++....+..+.||
T Consensus       115 ~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p  171 (172)
T 3v30_A          115 VKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP  171 (172)
T ss_dssp             HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred             HHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence            9999999999998 88899999999999999999999999999999999999888887

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.92  E-value=8.4e-26  Score=151.64  Aligned_cols=122  Identities=15%  Similarity=0.130  Sum_probs=109.3

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.|++ .+.+++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..|
T Consensus        38 ~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~------------------~d~~g~tpLh~A~~~g   98 (229)
T 2vge_A           38 QQAVK-EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS------------------PDSHGWTPLHCAASCN   98 (229)
T ss_dssp             HHHHH-HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTT
T ss_pred             HHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcC
Confidence            44554 4678899999999999999999999999999999988654                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccC-CCCCcHHHHH--HhCCChHHHHHHHhcCCCCCCCCCcccchHHH
Q 037410           82 NVHVVKILTKQGPDNPYSAN-NYGKTPLYMA--AKGRYSEMVIELLETAHQCPMKAPTERQLCML  143 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~-~~~~t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~  143 (161)
                      +.+++++|++.|++ ++..+ ..|.||||+|  +..++.+++++|+++|++++.+|..+.||++.
T Consensus        99 ~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~  162 (229)
T 2vge_A           99 DTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD  162 (229)
T ss_dssp             CHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSC
T ss_pred             CHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHH
Confidence            99999999999998 66665 6999999999  99999999999999999998888888888763

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.92  E-value=2.1e-24  Score=133.75  Aligned_cols=104  Identities=24%  Similarity=0.320  Sum_probs=95.4

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      |...+.+++.+|..|+||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..++.+
T Consensus        33 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~   94 (136)
T 2jab_A           33 LMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA------------------VDAIGFTPLHLAAFIGHLE   94 (136)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHTCHH
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcCCHH
Confidence            3345788899999999999999999999999999999887554                  6889999999999999999


Q ss_pred             HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410           85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA  127 (161)
Q Consensus        85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g  127 (161)
                      ++++|++.|++ ++.++..|.|||++|+..++.+++++|+++|
T Consensus        95 ~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           95 IAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            99999999998 8889999999999999999999999999876

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.92  E-value=8e-24  Score=145.20  Aligned_cols=90  Identities=22%  Similarity=0.252  Sum_probs=56.0

Q ss_pred             hhcCCCccHHHHHHhcCc----HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccc
Q 037410           65 MANNEKNTALHEAVCHGN----VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQ  139 (161)
Q Consensus        65 ~~~~~g~t~l~~a~~~~~----~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t  139 (161)
                      ..+..|.||||+|+..++    .+++++|++.|++ ++.++..|.||||+|++.++.+++++|++ .|++++.+|..|+|
T Consensus       177 ~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t  255 (285)
T 1wdy_A          177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT  255 (285)
T ss_dssp             CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCC
T ss_pred             ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCc
Confidence            344556666666666665    5666666666665 55666666667776666666666666666 56666666666677


Q ss_pred             hHHHHH---hHHHHHHHHh
Q 037410          140 LCMLQQ---CTFILLSLTR  155 (161)
Q Consensus       140 ~l~~~~---~~~~~~~l~~  155 (161)
                      |+++|.   ...+.+.|.+
T Consensus       256 ~l~~A~~~~~~~i~~~Ll~  274 (285)
T 1wdy_A          256 ALLLAVELKLKKIAELLCK  274 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHcCcHHHHHHHHH
Confidence            766643   2344444443

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=2.9e-25  Score=137.64  Aligned_cols=106  Identities=16%  Similarity=0.272  Sum_probs=97.5

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCC-CccHHHHHHhcC
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE-KNTALHEAVCHG   81 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~t~l~~a~~~~   81 (161)
                      .|+ ..+..++.+|..|+||||+|+. |+.+++++|+++|.+++.                  ++.. |.||||+|+..|
T Consensus        30 ~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------------------~~~~~g~t~L~~A~~~~   89 (136)
T 1d9s_A           30 QLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC------------------ADPATLTRPVHDAAREG   89 (136)
T ss_dssp             HHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC------------------CBTTTTBCHHHHHHHHT
T ss_pred             HHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC------------------cCCCCCCCHHHHHHHcC
Confidence            344 4578899999999999999999 999999999999988654                  6778 999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      +.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++
T Consensus        90 ~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           90 FLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999998 889999999999999999999999999999975

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.92  E-value=1.8e-24  Score=136.54  Aligned_cols=118  Identities=21%  Similarity=0.210  Sum_probs=105.6

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPY   98 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~   98 (161)
                      ..+|||.|+..|+.+++++|++.|...+                   .+..|.||||+|+..|+.+++++|++.|++ ++
T Consensus         2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~   61 (153)
T 1awc_B            2 LGKKLLEAARAGQDDEVRILMANGAPFT-------------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RD   61 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHTCCCC-------------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TT
T ss_pred             ccHHHHHHHHcCCHHHHHHHHHcCCCCC-------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence            4689999999999999999999987533                   377899999999999999999999999988 78


Q ss_pred             ccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           99 SANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        99 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      ..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.   ...+.+.|.++
T Consensus        62 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  122 (153)
T 1awc_B           62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY  122 (153)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            89999999999999999999999999999999999999999999964   34556666554

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.91  E-value=8.3e-24  Score=136.73  Aligned_cols=122  Identities=16%  Similarity=0.129  Sum_probs=104.8

Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCC
Q 037410           17 AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDN   96 (161)
Q Consensus        17 ~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~   96 (161)
                      .++.++||.|+..|+.+++++|++.+...                 ++..+..|.||||+|+..|+.+++++|++.|++ 
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-   64 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTEND-----------------LNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-   64 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCccc-----------------ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-
Confidence            56889999999999999999999985431                 334788999999999999999999999999988 


Q ss_pred             ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           97 PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        97 ~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.   ...+.+.|..+
T Consensus        65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~  127 (179)
T 3f6q_A           65 INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN  127 (179)
T ss_dssp             TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            8889999999999999999999999999999999999999999999964   44555555544

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.91  E-value=4.1e-24  Score=136.38  Aligned_cols=125  Identities=22%  Similarity=0.131  Sum_probs=107.2

Q ss_pred             ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410           14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG   93 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g   93 (161)
                      ..|.+|.||||.|+..|+.+++++|++.+...                 ....+..|.||||+|+..|+.+++++|++.|
T Consensus         3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g   65 (165)
T 3twr_A            3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVN-----------------CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG   65 (165)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTT-----------------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred             CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCC-----------------ccccccCCCCHHHHHHHcChHHHHHHHHhcC
Confidence            35778999999999999999999999864321                 2235778899999999999999999999999


Q ss_pred             CCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           94 PDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        94 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      ++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.   ...+.+.|.++
T Consensus        66 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  130 (165)
T 3twr_A           66 AD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH  130 (165)
T ss_dssp             CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             CC-CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            98 8889999999999999999999999999999999999999999999964   34555555554

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.91  E-value=1.7e-23  Score=147.37  Aligned_cols=140  Identities=21%  Similarity=0.176  Sum_probs=104.1

Q ss_pred             hhHHHhCCccccccCC-CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhh
Q 037410            2 EEILELCPSLLLNVNA-KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRM   65 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~-~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~   65 (161)
                      +.||+ .+++++.++. .|+||||+|+..|+.+++++|+++|+.++..+......+...               ...++.
T Consensus        42 ~~LL~-~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (337)
T 4g8k_A           42 QQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE  120 (337)
T ss_dssp             HHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred             HHHHH-CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhh
Confidence            45554 4688888876 499999999999999999999999999888766655444221               123455


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccc----------cCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCC
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYS----------ANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKA  134 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~----------~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~  134 (161)
                      .+..|.||+|+|+..|+.+++++|++.|++ ++.          .+..|.||||+|++.|+.+++++|++ .|++++.++
T Consensus       121 ~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~-~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d  199 (337)
T 4g8k_A          121 CDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD  199 (337)
T ss_dssp             BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC
T ss_pred             hccCCCCHHHHHHHcCcHHHHHHHHHcCCC-cchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC
Confidence            677778888888888888888888877765 322          23457788888888888888887775 477777777


Q ss_pred             CcccchHHH
Q 037410          135 PTERQLCML  143 (161)
Q Consensus       135 ~~~~t~l~~  143 (161)
                      ..|+|+++.
T Consensus       200 ~~g~t~l~~  208 (337)
T 4g8k_A          200 NMGRNALIH  208 (337)
T ss_dssp             TTSCCHHHH
T ss_pred             CCCCcHHHH
Confidence            777777765

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.91  E-value=2e-23  Score=140.03  Aligned_cols=123  Identities=21%  Similarity=0.196  Sum_probs=76.3

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN   82 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~   82 (161)
                      .++ ..+.+++.+|..|.||||+|+..|+.+++++|++.|...+...                 +..|.||||+|+..|+
T Consensus        27 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-----------------~~~~~t~L~~A~~~~~   88 (240)
T 3eu9_A           27 ELV-EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG-----------------GDLNSTPLHWATRQGH   88 (240)
T ss_dssp             HHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB-----------------TTTTBCHHHHHHHHTC
T ss_pred             HHH-HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc-----------------CCcCCChhHHHHHcCC
Confidence            344 4567788889999999999999999999999999988765432                 2234455555555555


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      .+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++..+..|+||++++
T Consensus        89 ~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a  149 (240)
T 3eu9_A           89 LSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA  149 (240)
T ss_dssp             HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             HHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHH
Confidence            5555555555544 444444555555555555555555555555555555555555555543

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.91  E-value=1.3e-23  Score=128.10  Aligned_cols=108  Identities=31%  Similarity=0.462  Sum_probs=97.9

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.+++ .+..++..|..|.||||+|+..|+.+++++|++.|.+++.                  .+..|.||||+|+..+
T Consensus        19 ~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~   79 (126)
T 1n0r_A           19 KLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNG   79 (126)
T ss_dssp             HHHHH-HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTT
T ss_pred             HHHHH-cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc------------------cCCCCCcHHHHHHHcC
Confidence            34444 4677888999999999999999999999999999887554                  6888999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      +.+++++|++.|++ ++.++..|.|||++|+..++.+++++|+++|++
T Consensus        80 ~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           80 HLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             hHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            99999999999998 788999999999999999999999999999975

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.91  E-value=2.8e-24  Score=147.39  Aligned_cols=144  Identities=18%  Similarity=0.164  Sum_probs=98.4

Q ss_pred             ccccCCCCCcHHHHHHHhCCH-HHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCCCccHHH
Q 037410           12 LLNVNAKGDTPLRVAAKFGHS-DIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNEKNTALH   75 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~   75 (161)
                      ++..+..|.||||+|+..+.. .++++|++.|.+++..+..+.++++..               ....+..+..|.||++
T Consensus        45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~  124 (269)
T 4b93_B           45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLH  124 (269)
T ss_dssp             ------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccc
Confidence            566778899999999998875 478999999999999888887776432               2234566788999999


Q ss_pred             HHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHH
Q 037410           76 EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLS  152 (161)
Q Consensus        76 ~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~  152 (161)
                      +|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|.   ...+.+.
T Consensus       125 ~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~  203 (269)
T 4b93_B          125 LACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVEL  203 (269)
T ss_dssp             HHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred             cccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHH
Confidence            99999999999999999998 8899999999999999999999999999999999999999999999963   4456666


Q ss_pred             HHhh
Q 037410          153 LTRY  156 (161)
Q Consensus       153 l~~~  156 (161)
                      |..+
T Consensus       204 Ll~~  207 (269)
T 4b93_B          204 LLLH  207 (269)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            6554

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.91  E-value=1.5e-24  Score=150.85  Aligned_cols=118  Identities=21%  Similarity=0.127  Sum_probs=102.4

Q ss_pred             hHHHhCCccccc------cCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccH
Q 037410            3 EILELCPSLLLN------VNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA   73 (161)
Q Consensus         3 ~ll~~~~~~~~~------~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~   73 (161)
                      .++ ..+.+++.      .+..|+||||+|+..   |+.+++++|+++|++++.                  +|..|.||
T Consensus       169 ~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~------------------~d~~G~Tp  229 (301)
T 2b0o_E          169 EAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------------------KAADGNTA  229 (301)
T ss_dssp             HHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC------------------CCTTCCCH
T ss_pred             HHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC------------------CCCCCCCH
Confidence            344 44556666      688999999999997   899999999999988654                  78899999


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410           74 LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus        74 l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      ||+|+..|+.+++++|++.|++ ++.+|..|.|||++|+..++.+++++|+++|++      .|.||+|+|..
T Consensus       230 Lh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~  295 (301)
T 2b0o_E          230 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYS  295 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred             HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence            9999999999999999999998 889999999999999999999999999999976      57899998753

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.91  E-value=1.7e-23  Score=140.39  Aligned_cols=154  Identities=18%  Similarity=0.114  Sum_probs=115.6

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhh
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMA   66 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~   66 (161)
                      +.+++.........+..|+||||+|+..|+.+++++|++.|.+++..+..+..++...               ...++..
T Consensus        59 ~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~  138 (240)
T 3eu9_A           59 KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM  138 (240)
T ss_dssp             HHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc
Confidence            3444444433334445588888888888888888888888887777666655554321               1224556


Q ss_pred             cCCCccHHHHHHhcCc-HHHHHHHHHcCCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           67 NNEKNTALHEAVCHGN-VHVVKILTKQGPDNPYSANN-YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        67 ~~~g~t~l~~a~~~~~-~~~~~~L~~~g~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      +..|.||||+|+..+. .+++++|++.+++ ++..+. .|.||||+|+..++.+++++|+++|++++.++..|+||+++|
T Consensus       139 ~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A  217 (240)
T 3eu9_A          139 DQNGMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLA  217 (240)
T ss_dssp             CTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHH
T ss_pred             CCCCCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence            7888999999996655 7899999999988 666665 899999999999999999999999999999999999999996


Q ss_pred             H---hHHHHHHHHhh
Q 037410          145 Q---CTFILLSLTRY  156 (161)
Q Consensus       145 ~---~~~~~~~l~~~  156 (161)
                      .   ...+.+.|.+.
T Consensus       218 ~~~~~~~~v~~L~~~  232 (240)
T 3eu9_A          218 KQRKNVWMINHLQEA  232 (240)
T ss_dssp             HHTTCHHHHHHHHHH
T ss_pred             HHcCcHHHHHHHHHh
Confidence            4   34455555544

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.91  E-value=1.7e-23  Score=132.32  Aligned_cols=118  Identities=22%  Similarity=0.223  Sum_probs=102.9

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPY   98 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~   98 (161)
                      +.||||+|+..|+.+++++|++. ...+                .+..+..|.||||+ +..|+.+++++|++.|++ ++
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~----------------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~   62 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHR-ELVH----------------PDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PN   62 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHT-TCCC----------------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TT
T ss_pred             cchHHHHHHHhCCHHHHHHHHHh-hCcC----------------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CC
Confidence            56999999999999999999998 3111                33478889999999 999999999999999998 88


Q ss_pred             ccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           99 SANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        99 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      .++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|.   ...+.+.|..
T Consensus        63 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  122 (156)
T 1bd8_A           63 VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA  122 (156)
T ss_dssp             CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred             CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999964   3444555443

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.90  E-value=5.9e-24  Score=143.38  Aligned_cols=113  Identities=23%  Similarity=0.194  Sum_probs=101.1

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      |...+.+++.+|..|+||||+|+..|+.+++++|+++|++++.                  +|..|.||||+|+..|+.+
T Consensus        56 Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpL~~A~~~~~~~  117 (239)
T 1ycs_B           56 IIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------------------ADSDGWTPLHCAASCNNVQ  117 (239)
T ss_dssp             HTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHTTCHH
T ss_pred             HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHH
Confidence            3345668999999999999999999999999999999988654                  7889999999999999999


Q ss_pred             HHHHHHHcCCCCccccCCCCC-cHHHHH--HhCCChHHHHHHHhcCCCCCCCCCc
Q 037410           85 VVKILTKQGPDNPYSANNYGK-TPLYMA--AKGRYSEMVIELLETAHQCPMKAPT  136 (161)
Q Consensus        85 ~~~~L~~~g~~~~~~~~~~~~-t~l~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~  136 (161)
                      ++++|++.|++ ++..+..+. ||||+|  +..|+.+++++|+++|++++..+..
T Consensus       118 ~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~  171 (239)
T 1ycs_B          118 VCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG  171 (239)
T ss_dssp             HHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred             HHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence            99999999998 777887776 999999  7889999999999999988877544

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.90  E-value=2.2e-22  Score=131.95  Aligned_cols=141  Identities=17%  Similarity=0.122  Sum_probs=116.2

Q ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHHhhH-hhhcCCCCCCCccchh---------------hhhhhhhcCCCccHHHHHHh
Q 037410           16 NAKGDTPLRVAAKFGHSDIVSVLVQTAK-IAQHGDGEPESGIGAD---------------RQMIRMANNEKNTALHEAVC   79 (161)
Q Consensus        16 ~~~g~t~lh~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~   79 (161)
                      +..+.||||.|+..|+.+.++.|+..+. +++..+..+.++++..               ...++..+..|.||||+|+.
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~   81 (201)
T 3hra_A            2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA   81 (201)
T ss_dssp             -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            3578999999999999999999999887 7777777766665432               23356677889999999999


Q ss_pred             cCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC-CCCCCCCCcccchHHHHHh--------HHHH
Q 037410           80 HGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA-HQCPMKAPTERQLCMLQQC--------TFIL  150 (161)
Q Consensus        80 ~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~l~~~~~--------~~~~  150 (161)
                      .|+.+++++|++.+...++..+..|.||||+|+..++.+++++|+++| ++++.++..|+||+|++..        ..+.
T Consensus        82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v  161 (201)
T 3hra_A           82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV  161 (201)
T ss_dssp             TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred             cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence            999999999996665448888999999999999999999999999999 9999999999999999752        5556


Q ss_pred             HHHHhh
Q 037410          151 LSLTRY  156 (161)
Q Consensus       151 ~~l~~~  156 (161)
                      +.|.++
T Consensus       162 ~~Ll~~  167 (201)
T 3hra_A          162 KLLMEN  167 (201)
T ss_dssp             HHHHHT
T ss_pred             HHHHHC
Confidence            666554

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.90  E-value=7.2e-23  Score=141.00  Aligned_cols=100  Identities=25%  Similarity=0.247  Sum_probs=92.8

Q ss_pred             ccccCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410           12 LLNVNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI   88 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~   88 (161)
                      ++..|..|+||||+|+..   |+.+++++|+++|++++.                  +|..|.||||+|+..|+.+++++
T Consensus       162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~------------------~d~~g~TpLh~A~~~g~~~~v~~  223 (278)
T 1dcq_A          162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK------------------QTGKGSTALHYCCLTDNAECLKL  223 (278)
T ss_dssp             CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC------------------CCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHH
Confidence            455588899999999999   899999999999998665                  78899999999999999999999


Q ss_pred             HHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCC
Q 037410           89 LTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC  130 (161)
Q Consensus        89 L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~  130 (161)
                      |++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus       224 Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          224 LLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            9999998 8999999999999999999999999999999754

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.89  E-value=8.9e-23  Score=145.26  Aligned_cols=121  Identities=14%  Similarity=0.110  Sum_probs=100.4

Q ss_pred             CCCCCcHHHHHHHh-CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc--CCCccHHHHHHhcCcHHHHHHHHHc
Q 037410           16 NAKGDTPLRVAAKF-GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN--NEKNTALHEAVCHGNVHVVKILTKQ   92 (161)
Q Consensus        16 ~~~g~t~lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~L~~~   92 (161)
                      +..+.|+||.|+.. |+.+++++|++.|.+++.                  .+  ..|.||||+|+..|+.+++++|++.
T Consensus       196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~------------------~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~  257 (368)
T 3jue_A          196 SLHPGALLFRASGHPPSLPTMADALAHGADVNW------------------VNGGQDNATPLIQATAANSLLACEFLLQN  257 (368)
T ss_dssp             -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTC------------------CCTTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCc------------------cccccCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            33456799999998 999999999998888665                  34  7788999999999999999999999


Q ss_pred             CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHh
Q 037410           93 GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTR  155 (161)
Q Consensus        93 g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~  155 (161)
                      |++ ++..|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|.   ...+...|..
T Consensus       258 Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~  322 (368)
T 3jue_A          258 GAN-VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRL  322 (368)
T ss_dssp             TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            888 7888889999999999999999999999999999999999999999863   3444555543

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.89  E-value=3.6e-22  Score=140.67  Aligned_cols=143  Identities=17%  Similarity=0.145  Sum_probs=113.7

Q ss_pred             ccccccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccch-------------------hhhhhhhhcCC
Q 037410           10 SLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGA-------------------DRQMIRMANNE   69 (161)
Q Consensus        10 ~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~   69 (161)
                      ......+..|.||||+|+..|+.+++++|++. |.+++..+..+...+..                   .+..++.++..
T Consensus       159 ~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~  238 (337)
T 4g8k_A          159 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER  238 (337)
T ss_dssp             -----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGG
T ss_pred             cccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCC
Confidence            34556778899999999999999999999964 88888877776655431                   11234567888


Q ss_pred             CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---Hh
Q 037410           70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QC  146 (161)
Q Consensus        70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~  146 (161)
                      |.||||+|+..|+.++++.|+..+..+++.+|..|.||||+|++.|+.+++++|+++|++++.+     +||++|   +.
T Consensus       239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~  313 (337)
T 4g8k_A          239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYD  313 (337)
T ss_dssp             GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTC
T ss_pred             CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCC
Confidence            9999999999999999999998744348899999999999999999999999999999988764     599885   34


Q ss_pred             HHHHHHHHhhh
Q 037410          147 TFILLSLTRYS  157 (161)
Q Consensus       147 ~~~~~~l~~~~  157 (161)
                      ..+.+.|.++.
T Consensus       314 ~~iv~~Ll~~G  324 (337)
T 4g8k_A          314 HSLVKVLLSHG  324 (337)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHCc
Confidence            56777776653

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.88  E-value=2.4e-22  Score=138.34  Aligned_cols=127  Identities=16%  Similarity=0.032  Sum_probs=109.6

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc---CcHHHHHHHHHcCCC
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH---GNVHVVKILTKQGPD   95 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~L~~~g~~   95 (161)
                      ..++|+.|+..|+.+.+..+++.|.+.+...            .++..+..|.||||+|+..   ++.+++++|++.|++
T Consensus       130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~------------~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~  197 (278)
T 1dcq_A          130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKI------------PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN  197 (278)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBC------------CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC
T ss_pred             hhhhhhhHhhhcccHHHHHHHHhhcchhhhc------------cccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC
Confidence            4578999999999999999999988754311            0223477899999999999   899999999999998


Q ss_pred             CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhhhC
Q 037410           96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRYSG  158 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~~~  158 (161)
                       ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|.   ...+.+.|.++..
T Consensus       198 -in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga  262 (278)
T 1dcq_A          198 -LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  262 (278)
T ss_dssp             -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             -ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence             8899999999999999999999999999999999999999999999964   5566677766543

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.88  E-value=3.5e-23  Score=134.77  Aligned_cols=113  Identities=9%  Similarity=0.061  Sum_probs=98.8

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCC------HHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCc-cHHH
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGH------SDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN-TALH   75 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~   75 (161)
                      ++|...+++++.+|..|+||||+|+..|+      .+++++|+++|++++.                  +|..|. ||||
T Consensus        59 ~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~------------------~d~~g~ttpLh  120 (186)
T 3t8k_A           59 MFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA------------------LYKPYKIVVFK  120 (186)
T ss_dssp             HHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS------------------CBGGGTBCTTG
T ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc------------------cCCCcCchHHH
Confidence            35557789999999999999999999987      6889999999999665                  788999 9999


Q ss_pred             HHHhcC-----cHHHHHHHHH-cCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCC
Q 037410           76 EAVCHG-----NVHVVKILTK-QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKA  134 (161)
Q Consensus        76 ~a~~~~-----~~~~~~~L~~-~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~  134 (161)
                      +|+..+     ..+++++|++ .|++ ++.+|..|.||||+|++.++.+++++|.+.....+.++
T Consensus       121 ~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~  184 (186)
T 3t8k_A          121 NIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE  184 (186)
T ss_dssp             GGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence            999844     4679999999 8988 89999999999999999999999999998775555544

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.88  E-value=3.1e-23  Score=138.25  Aligned_cols=116  Identities=23%  Similarity=0.232  Sum_probs=91.0

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      .|+ ..+..++.+|..|+||||+||..|+.+++++|++. |.+++.                  ++..|.||||+|+..|
T Consensus        91 ~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------------------~d~~g~tpL~~A~~~~  151 (222)
T 3ehr_A           91 ECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------------------QNKLGDTALHAAAWKG  151 (222)
T ss_dssp             HHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------------------CCTTSCCHHHHHHHHT
T ss_pred             HHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------------------cCCCCCCHHHHHHHcC
Confidence            444 46788999999999999999999999999999998 777554                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCccc
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER  138 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~  138 (161)
                      +.+++++|++.|++ ++.++..|.|||++|+..++.++++.|++.|+.....+..++
T Consensus       152 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~  207 (222)
T 3ehr_A          152 YADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY  207 (222)
T ss_dssp             CHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred             CHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence            99999999999998 889999999999999999999999999999998887776654

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.88  E-value=3.8e-22  Score=142.02  Aligned_cols=120  Identities=18%  Similarity=0.178  Sum_probs=95.8

Q ss_pred             HhCCccccccC--CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcH
Q 037410            6 ELCPSLLLNVN--AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNV   83 (161)
Q Consensus         6 ~~~~~~~~~~~--~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~   83 (161)
                      ...+++++..+  ..|+||||+|+..|+.+++++|+++|++++.                  .+..|.||||+|+..|+.
T Consensus       220 L~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------------------~d~~G~TpLh~A~~~g~~  281 (368)
T 3jue_A          220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ------------------ADSAGRGPLHHATILGHT  281 (368)
T ss_dssp             HHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCH
T ss_pred             HHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCcH
Confidence            35678888888  8899999999999999999999999988654                  788999999999999999


Q ss_pred             HHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC---CCCCCCCCcccchHHHH
Q 037410           84 HVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA---HQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        84 ~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~l~~~  144 (161)
                      +++++|++.|++ ++..|..|.||||+|+..++.+++++|++++   .+....+..+.|++++.
T Consensus       282 ~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~  344 (368)
T 3jue_A          282 GLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF  344 (368)
T ss_dssp             HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred             HHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence            999999999998 8899999999999999999999999999876   44456667788888763

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*

Probab=99.88  E-value=6e-22  Score=146.29  Aligned_cols=125  Identities=14%  Similarity=-0.029  Sum_probs=107.5

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHh---cCcHHHHHHHHHcCCC
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC---HGNVHVVKILTKQGPD   95 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~---~~~~~~~~~L~~~g~~   95 (161)
                      ..+.||.|+..|+.+.++.|++.|.+++....            ....+..|.||||+|+.   .|+.+++++|++.|++
T Consensus       132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~  199 (497)
T 3lvq_E          132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH  199 (497)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBC------------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC
T ss_pred             cHHHHHHHHhccCHHHHHHHHhhcccccCCCC------------CcccccccchHHHHHHHhcccccHHHHHHHHHcCCC
Confidence            44789999999999999999999988665210            01137789999999965   8999999999999998


Q ss_pred             CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410           96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                       ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|.   ...+...|..+
T Consensus       200 -vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~  262 (497)
T 3lvq_E          200 -LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA  262 (497)
T ss_dssp             -TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             -CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence             8999999999999999999999999999999999999999999999964   35566666554

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.88  E-value=3.9e-22  Score=137.19  Aligned_cols=101  Identities=23%  Similarity=0.266  Sum_probs=89.7

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      .+...+..|..|+||||+|+..|+.+++++|++.|++++.                  +|..|.||||+|+..|+.++++
T Consensus       172 ~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~------------------~d~~G~TpLh~A~~~g~~~iv~  233 (276)
T 4hbd_A          172 LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV------------------QDDDGSTALMCACEHGHKEIAG  233 (276)
T ss_dssp             HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHH
T ss_pred             cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHH
Confidence            3456666777888999999999999999999988887554                  7889999999999999999999


Q ss_pred             HHHH-cCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410           88 ILTK-QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA  127 (161)
Q Consensus        88 ~L~~-~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g  127 (161)
                      +|++ .|++ ++.+|..|.|||++|+..|+.+++++|++++
T Consensus       234 ~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          234 LLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             HHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             HHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            9999 7877 8899999999999999999999999999875

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.87  E-value=1.4e-21  Score=135.90  Aligned_cols=124  Identities=15%  Similarity=-0.036  Sum_probs=105.4

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc---CcHHHHHHHHHcCCC
Q 037410           19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH---GNVHVVKILTKQGPD   95 (161)
Q Consensus        19 g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~L~~~g~~   95 (161)
                      +.++|+.|+..|+.+.++.|++.|.+++....            ....+..|.||||+|+..   ++.+++++|++.|++
T Consensus       151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~------------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad  218 (301)
T 2b0o_E          151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH  218 (301)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEE------------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC
T ss_pred             hHHHHhhhhhccCHHHHHHHHhcCCcccccCC------------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC
Confidence            55789999999999999999999887654100            001477899999999987   899999999999998


Q ss_pred             CccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHh
Q 037410           96 NPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTR  155 (161)
Q Consensus        96 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~  155 (161)
                       ++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|..   ..+...|..
T Consensus       219 -vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~  280 (301)
T 2b0o_E          219 -LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQ  280 (301)
T ss_dssp             -TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred             -CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence             88999999999999999999999999999999999999999999999654   344555444

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.87  E-value=3.5e-22  Score=119.50  Aligned_cols=97  Identities=23%  Similarity=0.308  Sum_probs=81.5

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      .+......|.+|+||||+|+..|+.+++++|++.|.+++.                  ++..|.||||+|+..|+.++++
T Consensus        13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~------------------~d~~g~tpLh~A~~~~~~~~v~   74 (110)
T 2zgd_A           13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAA------------------KDKNGSTPLHLAARNGHLEVVK   74 (110)
T ss_dssp             ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHH
T ss_pred             CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHH
Confidence            3456677888999999999999999999999999887554                  6889999999999999999999


Q ss_pred             HHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHH
Q 037410           88 ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL  123 (161)
Q Consensus        88 ~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L  123 (161)
                      +|++.|++ ++.++..|.||||+|+..++.+++++|
T Consensus        75 ~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           75 LLLEAGAD-VXAQDKFGKTAFDISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred             HHHHcCCC-ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence            99999988 888999999999999999999999876

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.87  E-value=1.2e-21  Score=127.04  Aligned_cols=111  Identities=23%  Similarity=0.197  Sum_probs=94.1

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhc
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCH   80 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~   80 (161)
                      +.+++  +.+++.+|..|+||||+|+..|+.+++++|++.|++++.                  .+ ..|.||||+|+..
T Consensus        61 ~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~~g~tpL~~A~~~  120 (183)
T 3deo_A           61 SQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------------------RDMRGGLTALHMAAGY  120 (183)
T ss_dssp             HHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCSSSSCCHHHHHHHT
T ss_pred             HHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCCHHHHHHhc
Confidence            34555  778999999999999999999999999999999988665                  45 8899999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHH
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFIL  150 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~  150 (161)
                      |+.+++++|++.|++ ++.+|..|.||||+|++.++.                 ..+.++++++......
T Consensus       121 ~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~  172 (183)
T 3deo_A          121 VRPEVVEALVELGAD-IEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLE  172 (183)
T ss_dssp             TCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHH
Confidence            999999999999998 889999999999999875322                 3457888886554433

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.86  E-value=4.7e-22  Score=134.51  Aligned_cols=91  Identities=27%  Similarity=0.298  Sum_probs=82.1

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhc-CCCccHHHHHHhc
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMAN-NEKNTALHEAVCH   80 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~   80 (161)
                      +.+++  +.+++.+|..|+||||+|+..|+.+++++|+++|++++.                  .+ ..|.||||+|+..
T Consensus        62 ~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~~g~t~L~~A~~~  121 (244)
T 3ui2_A           62 SQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------------------RDMRGGLTALHMAAGY  121 (244)
T ss_dssp             HHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCSSSCCCHHHHHHHT
T ss_pred             HHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------------------CCCCCCCCHHHHHHHc
Confidence            34454  778899999999999999999999999999999988665                  45 7899999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK  113 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~  113 (161)
                      |+.+++++|++.|++ ++.++..|.||||+|+.
T Consensus       122 g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~  153 (244)
T 3ui2_A          122 VRPEVVEALVELGAD-IEVEDERGLTALELARE  153 (244)
T ss_dssp             TCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHH
Confidence            999999999999998 88999999999999984

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.86  E-value=5.1e-22  Score=120.91  Aligned_cols=92  Identities=23%  Similarity=0.274  Sum_probs=82.6

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.++ ..+..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  ++..|.||||+|+..+
T Consensus        24 ~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~tpL~~A~~~~   84 (123)
T 3aaa_C           24 KDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------------------PDKHHITPLLSAVYEG   84 (123)
T ss_dssp             HHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHHT
T ss_pred             HHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcC
Confidence            3444 45678899999999999999999999999999999988554                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAK  113 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~  113 (161)
                      +.+++++|++.|++ ++.++..|.||+++|..
T Consensus        85 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~  115 (123)
T 3aaa_C           85 HVSCVKLLLSKGAD-KTVKGPDGLTAFEATDN  115 (123)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCC
T ss_pred             CHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCC
Confidence            99999999999998 88999999999999944

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.86  E-value=1.5e-22  Score=125.40  Aligned_cols=104  Identities=23%  Similarity=0.333  Sum_probs=91.0

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      |...+..++.+|..|+||||+|+..|+.+++++|++.|.+++.                  ++..|.||||+|+..++.+
T Consensus        29 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~   90 (137)
T 3c5r_A           29 LLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------------------TGYQNDSPLHDAAKNGHVD   90 (137)
T ss_dssp             HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCGGGCCHHHHHHHTTCHH
T ss_pred             HHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC------------------cCCCCCCHHHHHHHcCCHH
Confidence            3456788899999999999999999999999999999887554                  7888999999999999999


Q ss_pred             HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC
Q 037410           85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA  127 (161)
Q Consensus        85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g  127 (161)
                      ++++|++.|++ ++.++..|.||+++|+..+..+++++|.+.+
T Consensus        91 ~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~  132 (137)
T 3c5r_A           91 IVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNE  132 (137)
T ss_dssp             HHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred             HHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence            99999999998 8899999999999999988888887776654

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.84  E-value=1.9e-20  Score=108.54  Aligned_cols=86  Identities=30%  Similarity=0.361  Sum_probs=76.4

Q ss_pred             CCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---
Q 037410           69 EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---  145 (161)
Q Consensus        69 ~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---  145 (161)
                      +|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||+|++.   
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            478999999999999999999999998 8899999999999999999999999999999999999999999999964   


Q ss_pred             hHHHHHHHHh
Q 037410          146 CTFILLSLTR  155 (161)
Q Consensus       146 ~~~~~~~l~~  155 (161)
                      ...+.+.|.+
T Consensus        80 ~~~~~~~Ll~   89 (93)
T 1n0q_A           80 HLEVVKLLLE   89 (93)
T ss_dssp             CHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            3445555544

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.83  E-value=6.3e-21  Score=134.05  Aligned_cols=136  Identities=16%  Similarity=0.133  Sum_probs=108.1

Q ss_pred             HHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCC--------------CCCc-------cc-----
Q 037410            4 ILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGE--------------PESG-------IG-----   57 (161)
Q Consensus         4 ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~~~~-------~~-----   57 (161)
                      +|...++.++.+|..|.|+++     |+.+++++|+++|.+++.....              ....       ..     
T Consensus        37 ~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  111 (327)
T 1sw6_A           37 DFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQE  111 (327)
T ss_dssp             STTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHH
T ss_pred             HHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHH
Confidence            455678899999999999987     8999999999999876552110              0000       00     


Q ss_pred             ------hhhhhhhh-hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCC---hHHHHHHHhcC
Q 037410           58 ------ADRQMIRM-ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY---SEMVIELLETA  127 (161)
Q Consensus        58 ------~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~---~~~~~~Ll~~g  127 (161)
                            .....++. .+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+   .++++.|++++
T Consensus       112 ~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~  190 (327)
T 1sw6_A          112 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL  190 (327)
T ss_dssp             HHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH
T ss_pred             HHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhh
Confidence                  01123455 788999999999999999999999999998 88999999999999999998   78888888887


Q ss_pred             -CCCCCCCCcccchHHHHH
Q 037410          128 -HQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus       128 -~~~~~~~~~~~t~l~~~~  145 (161)
                       ++++.+|..|+||||++.
T Consensus       191 ~~~~~~~d~~g~tpLh~A~  209 (327)
T 1sw6_A          191 YPCLILEDSMNRTILHHII  209 (327)
T ss_dssp             GGGGGEECTTCCCHHHHHH
T ss_pred             hccccCCCCCCCCHHHHHH
Confidence             789999999999999965

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.82  E-value=9.9e-22  Score=140.31  Aligned_cols=115  Identities=17%  Similarity=0.135  Sum_probs=90.9

Q ss_pred             cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCC
Q 037410           15 VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGP   94 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~   94 (161)
                      .+.+++||||+|++.|+.+++++|++.|.....               .+..+..|.||||+|+..|+.+++++|++.|+
T Consensus        88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~---------------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga  152 (376)
T 2aja_A           88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEI---------------VKVIQAENYQAFRLAAENGHLHVLNRLCELAP  152 (376)
T ss_dssp             HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSS---------------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT
T ss_pred             cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHH---------------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence            455678999999999999999999999873211               11234567789999999999999999999996


Q ss_pred             CC--ccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCC--CCCcccchHHHHH
Q 037410           95 DN--PYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPM--KAPTERQLCMLQQ  145 (161)
Q Consensus        95 ~~--~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~~~t~l~~~~  145 (161)
                      +.  .+..+.+ .||||+|+..|+.+++++|+++|++++.  .|..|+||||+|.
T Consensus       153 d~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa  206 (376)
T 2aja_A          153 TEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA  206 (376)
T ss_dssp             TTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHH
T ss_pred             CccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHH
Confidence            41  0122223 8999999999999999999999999887  8889999999976

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.80  E-value=2.5e-21  Score=138.22  Aligned_cols=107  Identities=18%  Similarity=0.174  Sum_probs=88.5

Q ss_pred             ccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcC
Q 037410           14 NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQG   93 (161)
Q Consensus        14 ~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g   93 (161)
                      ..+..|.||||+||..|+.+++++|+++|++...               .+..+.. .||||+|+..|+.+++++|++.|
T Consensus       123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~---------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~g  186 (376)
T 2aja_A          123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM---------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELA  186 (376)
T ss_dssp             --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH---------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSC
T ss_pred             HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc---------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcC
Confidence            4456788999999999999999999999964211               1111222 89999999999999999999999


Q ss_pred             CCCccc--cCCCCCcHHHHHH-hCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           94 PDNPYS--ANNYGKTPLYMAA-KGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        94 ~~~~~~--~~~~~~t~l~~A~-~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      ++ ++.  .+..|.||||+|+ ..|+.+++++|+++|+       .++||+++|
T Consensus       187 a~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~A  232 (376)
T 2aja_A          187 PT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHE  232 (376)
T ss_dssp             GG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCT
T ss_pred             Cc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHH
Confidence            87 555  7888999999999 9999999999999874       389999874

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.79  E-value=5.8e-19  Score=105.37  Aligned_cols=86  Identities=23%  Similarity=0.210  Sum_probs=76.3

Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHH
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCM  142 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~  142 (161)
                      ....+..|.|+||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+||+|
T Consensus        17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~   95 (110)
T 2zgd_A           17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD   95 (110)
T ss_dssp             -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence            445688999999999999999999999999988 8889999999999999999999999999999999999999999999


Q ss_pred             HHHhHHH
Q 037410          143 LQQCTFI  149 (161)
Q Consensus       143 ~~~~~~~  149 (161)
                      +|.....
T Consensus        96 ~A~~~~~  102 (110)
T 2zgd_A           96 ISIDNGN  102 (110)
T ss_dssp             HHHHHTC
T ss_pred             HHHHcCC
Confidence            9765443

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.77  E-value=1.2e-18  Score=104.65  Aligned_cols=90  Identities=28%  Similarity=0.311  Sum_probs=80.9

Q ss_pred             hhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410           65 MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        65 ~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      .+|..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|+||++++
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence            3688999999999999999999999999988 888999999999999999999999999999999999999999999996


Q ss_pred             Hh---HHHHHHHHh
Q 037410          145 QC---TFILLSLTR  155 (161)
Q Consensus       145 ~~---~~~~~~l~~  155 (161)
                      ..   ..+.+.|.+
T Consensus        83 ~~~~~~~~~~~Ll~   96 (115)
T 2l6b_A           83 KKNGHHEIVKLLDA   96 (115)
T ss_dssp             HTTTCHHHHHHHHT
T ss_pred             HHCCCHHHHHHHHH
Confidence            54   445555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	161
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-14
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-07
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-13
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-07
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-13
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-09
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-06
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-11
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-06
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-04
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	8e-05
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	3e-04
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-10
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-07
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-10
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-09
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	5e-08
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	5e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	0.001
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-08
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	4e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	8e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	9e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-06
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.002
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.002
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.003
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	2e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	4e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	4e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.003
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.001
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.003
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.004

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (165), Expect = 1e-14
 Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 19/128 (14%)

Query: 21  TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH 80
           TPL VA+  GH  IV  L+Q                GA      ++N +  T LH A   
Sbjct: 2   TPLHVASFMGHLPIVKNLLQR---------------GAS---PNVSNVKVETPLHMAARA 43

Query: 81  GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQL 140
           G+  V K L +       +     +TPL+ AA+  ++ MV  LLE      +        
Sbjct: 44  GHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTP 102

Query: 141 CMLQQCTF 148
             +     
Sbjct: 103 LHIAAREG 110

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 1e-11
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 20/143 (13%)

Query: 1   MEEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQ-------------TAKI 44
             E++ L  S   N N     G TPL + A+ GH  +  VL++             T   
Sbjct: 243 HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLH 302

Query: 45  AQHGDGEPES--GIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN 102
                G  +    +   +  +        + LH+A   G+  +V +L K G   P   ++
Sbjct: 303 VASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS-PNEVSS 361

Query: 103 YGKTPLYMAAKGRYSEMVIELLE 125
            G TPL +A +  Y   V ++L+
Sbjct: 362 DGTTPLAIAKRLGYIS-VTDVLK 383

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 1e-08
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 19/119 (15%)

Query: 14  NVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTA 73
            +  KG TPL VAAK+G   +  +L++                 A       A     T 
Sbjct: 127 CMTKKGFTPLHVAAKYGKVRVAELLLER---------------DAH---PNAAGKNGLTP 168

Query: 74  LHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPM 132
           LH AV H N+ +VK+L  +G   P+S    G TPL++AAK    E+   LL+       
Sbjct: 169 LHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA 226

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 1e-07
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 53/147 (36%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           + N      +TPL +AA+ GH+++   L+Q                 A    +     + 
Sbjct: 25  SPNVSNVKVETPLHMAARAGHTEVAKYLLQN---------------KAK---VNAKAKDD 66

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPY-------------------------------- 98
            T LH A   G+ ++VK+L +   +                                   
Sbjct: 67  QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA 126

Query: 99  SANNYGKTPLYMAAKGRYSEMVIELLE 125
                G TPL++AAK     +   LLE
Sbjct: 127 CMTKKGFTPLHVAAKYGKVRVAELLLE 153

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 19/141 (13%)

Query: 3   EILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQ-------------TAKIAQ 46
            + EL      + NA    G TPL VA    + DIV +L+              T     
Sbjct: 146 RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA 205

Query: 47  HGDGEPESGIG--ADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYG 104
               + E               + +  T LH A   G+  +V +       N    N  G
Sbjct: 206 AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL-LLSKQANGNLGNKSG 264

Query: 105 KTPLYMAAKGRYSEMVIELLE 125
            TPL++ A+  +  +   L++
Sbjct: 265 LTPLHLVAQEGHVPVADVLIK 285

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 1e-13
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 26/133 (19%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKI---AQHGDGEPESGI---------------- 56
              G T L  AA+ GH +++ +L+        A    G                      
Sbjct: 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHL 204

Query: 57  ----GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
               GAD   + +      T L  AV   ++ +V+ L +Q        ++ GKT L +A 
Sbjct: 205 LLDHGAD---VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261

Query: 113 KGRYSEMVIELLE 125
           + +  ++   L +
Sbjct: 262 ELKLKKIAELLCK 274

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 6e-10
 Identities = 19/78 (24%), Positives = 34/78 (43%)

Query: 66  ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           A  E N  L +AV + +V +V+ L + G +  +     G TPL+ A +    ++V  LL 
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 126 TAHQCPMKAPTERQLCML 143
                 ++        +L
Sbjct: 61  HGADPVLRKKNGATPFLL 78

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 1e-07
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 20/85 (23%)

Query: 14  NVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
           +VN +   G TPL +A +  H  +V  L++                  +   I   +++ 
Sbjct: 211 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQE--------------HIE---INDTDSDG 253

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD 95
            TAL  AV      + ++L K+G  
Sbjct: 254 KTALLLAVELKLKKIAELLCKRGAS 278

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 32/140 (22%), Positives = 51/140 (36%), Gaps = 28/140 (20%)

Query: 14  NVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKI---------------AQHGDGEPES 54
           NVN +    G TPL  A +    DIV +L++                   A  G  +   
Sbjct: 30  NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLK 89

Query: 55  GIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD---------NPYSANNYGK 105
              +    +   +    TA  EA  +G V  +K L K+G +         +       G 
Sbjct: 90  LFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA 149

Query: 106 TPLYMAAKGRYSEMVIELLE 125
           T L  AA+  + E++  LL+
Sbjct: 150 TALMDAAEKGHVEVLKILLD 169

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 8/110 (7%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           +  G T    AA +G    +  L +            E                  TAL 
Sbjct: 102 DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE--------DQERLRKGGATALM 153

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
           +A   G+V V+KIL  +   +  + +N G+  L  A        V  +  
Sbjct: 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITH 203

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 4e-04
 Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 19/126 (15%)

Query: 18  KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNE-KNTALHE 76
           + +  L  A +    D+V  L++                GA+   +     E   T LH 
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEG---------------GAN---VNFQEEEGGWTPLHN 45

Query: 77  AVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPT 136
           AV      +V++L + G D      N     L  A  G    + + L + A         
Sbjct: 46  AVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYG 105

Query: 137 ERQLCM 142
                 
Sbjct: 106 FTAFME 111

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 63.8 bits (154), Expect = 3e-13
 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 16/111 (14%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
             K +    VAA  G S  +  L                        +++   E   A  
Sbjct: 87  GIKSEVICFVAAITGCSSALDTLCLLLTS------------DEI---VKVIQAENYQAFR 131

Query: 76  EAVCHGNVHVVKILTKQGPD-NPYSANNYGKTPLYMAAKGRYSEMVIELLE 125
            A  +G++HV+  L +  P                +AA+  +  ++  L E
Sbjct: 132 LAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE 182

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 53.0 bits (126), Expect = 2e-09
 Identities = 9/127 (7%), Positives = 27/127 (21%), Gaps = 13/127 (10%)

Query: 11  LLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEK 70
            LL+             ++G   +   + +     +  +      +     +  +    +
Sbjct: 215 FLLDCPVMLAYAEIHEFEYGEKYVNPFIARHV--NRLKEMHDAFKLSNPDGVFDLVTKSE 272

Query: 71  N-------TALHEAVCHGNVHVVKILTKQGPD----NPYSANNYGKTPLYMAAKGRYSEM 119
                     L        +  ++ L             +        L +A +      
Sbjct: 273 CLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGA 332

Query: 120 VIELLET 126
              LL  
Sbjct: 333 CALLLSI 339

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 50.7 bits (120), Expect = 1e-08
 Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 24/131 (18%)

Query: 3   EILELCPSLLLN------VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGI 56
             L+    LL +      + A+     R+AA+ GH  +++ L +               +
Sbjct: 104 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE---------------L 148

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD--NPYSANNYGKTPLYMAAKG 114
                 + M   E   A   A  +G++HV+  L +  P                + A   
Sbjct: 149 APTEI-MAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 207

Query: 115 RYSEMVIELLE 125
            +  ++  LL+
Sbjct: 208 GHHNVINFLLD 218

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 11/139 (7%), Positives = 28/139 (20%), Gaps = 9/139 (6%)

Query: 12  LLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN 71
           L+ ++ K    + +        +        ++                        +  
Sbjct: 39  LMTLSYKEAIHIFLPGTKNMEQV-------RQLLCLYYAHYNRNAKQLWSDAHKKGIKSE 91

Query: 72  TALHEAVCHGNVHVVKILTK--QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ 129
                A   G    +  L       +              +AA+  +  ++  L E A  
Sbjct: 92  VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT 151

Query: 130 CPMKAPTERQLCMLQQCTF 148
             M           +    
Sbjct: 152 EIMAMIQAENYHAFRLAAE 170

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 9e-11
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 17/126 (13%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQ-------------TA--KIAQHGDGEPESGIGAD 59
           VN  G TPL  AA     +I  +L++             TA  + A  G+ +    +   
Sbjct: 99  VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY 158

Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
           +    + + E NT LH A     V   K+L  QG    Y  N   KTPL +A  G    +
Sbjct: 159 KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQVAKGG-LGLI 216

Query: 120 VIELLE 125
           +  ++E
Sbjct: 217 LKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 16/148 (10%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           ++E +    SL    +    T L  A   GH++IV  L+Q        D    S +    
Sbjct: 19  LKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA 78

Query: 61  QM---------------IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGK 105
                            +   N    T LH A       +  +L + G + P + ++Y  
Sbjct: 79  SAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYEA 137

Query: 106 TPLYMAAKGRYSEMVIELLETAHQCPMK 133
           T ++ AA     +M+  LL       ++
Sbjct: 138 TAMHRAAAKGNLKMIHILLYYKASTNIQ 165

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 11/78 (14%), Positives = 22/78 (28%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC 130
           N  +      G +  +K             +   +T L+ A    ++E+V  LL+     
Sbjct: 4   NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63

Query: 131 PMKAPTERQLCMLQQCTF 148
             K         +     
Sbjct: 64  NDKDDAGWSPLHIAASAG 81

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.1 bits (131), Expect = 2e-10
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 62  MIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVI 121
                + +  T +  A   G + VV  L +QG     + +    T   +A    +  +V 
Sbjct: 213 NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIV- 270

Query: 122 ELLE 125
           ++ +
Sbjct: 271 DIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.6 bits (114), Expect = 5e-08
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 18/76 (23%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
           +  G TP+ +AA+ G  ++V  L+Q                GA    +   +   +TA  
Sbjct: 218 DEDGKTPIMLAAQEGRIEVVMYLIQ---------------QGAS---VEAVDATDHTARQ 259

Query: 76  EAVCHGNVHVVKILTK 91
            A  + + ++V I  +
Sbjct: 260 LAQANNHHNIVDIFDR 275

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.1 bits (92), Expect = 5e-05
 Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 7/87 (8%)

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPD-------NPYSANNYGKTPLYMAAKGRYSEM 119
                T LH    + +    + L             +  + +    TPL +A   R   +
Sbjct: 30  PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL 89

Query: 120 VIELLETAHQCPMKAPTERQLCMLQQC 146
           V  L++      +   +ER        
Sbjct: 90  VAYLMKAGADPTIYNKSERSALHQAAA 116

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.3 bits (90), Expect = 8e-05
 Identities = 19/63 (30%), Positives = 31/63 (49%)

Query: 63  IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIE 122
                 +  TALH A    N+ +VK L  +   N    +  GKTP+ +AA+    E+V+ 
Sbjct: 180 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 239

Query: 123 LLE 125
           L++
Sbjct: 240 LIQ 242

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.8 bits (86), Expect = 3e-04
 Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 12/143 (8%)

Query: 2   EEILELCPSLLLNVNAK--GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD 59
             I E      +N+       T L   A    ++    L+           +     GAD
Sbjct: 14  YAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA-------KECIAAGAD 66

Query: 60  RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEM 119
              +   + ++NT L  AV      +V  L K G D      +        AA   +  M
Sbjct: 67  ---VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMM 123

Query: 120 VIELLETAHQCPMKAPTERQLCM 142
           V  L  T  +  ++      +  
Sbjct: 124 VYMLNSTKLKGDIEELDRNGMTA 146

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.7 bits (130), Expect = 4e-10
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 16/112 (14%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           M  I++     + +   + ++            I+  L     IA               
Sbjct: 205 MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN-------------- 250

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA 112
            M+   ++  +T L+ A   GN+ +V  L   G D P+ AN  G  P+   A
Sbjct: 251 -MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD-PFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 4e-07
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 7/127 (5%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
            E +L+     L+  ++   T L            S   +      + D      +    
Sbjct: 159 FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAK-----YYLDILMGWIVKKQN 213

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQG--PDNPYSANNYGKTPLYMAAKGRYSE 118
           + I+   NEK +  ++        +++ L  +    +   + ++ G T L +AA+     
Sbjct: 214 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS 273

Query: 119 MVIELLE 125
           +V  LL+
Sbjct: 274 IVDALLD 280

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 5e-06
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 35/159 (22%)

Query: 1   MEEILELCPSLLLNVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGI 56
           ++E+ +  P+  LN+N      G+TPL       + ++V  LV+      +GD   ES +
Sbjct: 85  LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCL 144

Query: 57  GA-------------------DRQMIRMANNEKNTALHEAVCHGNVH------------V 85
                                    + + ++   T LH  +    +             +
Sbjct: 145 VKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 204

Query: 86  VKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
           +  + K+      S  N  ++        R   ++  L 
Sbjct: 205 MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 243

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.3 bits (126), Expect = 9e-10
 Identities = 13/78 (16%), Positives = 23/78 (29%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC 130
           N  LH+A        V+ L    P      +  G+ PL+ +   +  E+   LL      
Sbjct: 1   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60

Query: 131 PMKAPTERQLCMLQQCTF 148
            +    +           
Sbjct: 61  NLDDYPDDSGWTPFHIAC 78

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.0 bits (94), Expect = 2e-05
 Identities = 8/65 (12%), Positives = 22/65 (33%)

Query: 58  ADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYS 117
             +  +   + +  T L  A+  G+     +L ++        +N G     +A   +  
Sbjct: 160 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVK 219

Query: 118 EMVIE 122
           +  + 
Sbjct: 220 KFFLN 224

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.4 bits (90), Expect = 5e-05
 Identities = 9/129 (6%), Positives = 23/129 (17%), Gaps = 17/129 (13%)

Query: 20  DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVC 79
           + PL  A        V  L+ +                +    +   + +    LH +V 
Sbjct: 1   NYPLHQACMENEFFKVQELLHSK--------------PSL---LLQKDQDGRIPLHWSVS 43

Query: 80  HGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQ 139
                +   L  +  +                       + +                  
Sbjct: 44  FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN 103

Query: 140 LCMLQQCTF 148
             +      
Sbjct: 104 QGVTCLHLA 112

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (126), Expect = 1e-09
 Identities = 25/120 (20%), Positives = 38/120 (31%), Gaps = 16/120 (13%)

Query: 15  VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTAL 74
           V   GDT L +A    H   +  L+                  A  + + + N+   TAL
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLG---------------FSAGHEYLDLQNDLGQTAL 49

Query: 75  HEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKA 134
           H A   G    V+ L   G     +         ++A + R       LL+     P  A
Sbjct: 50  HLAAILGEASTVEKLYAAGAGVLVAERGGHTAL-HLACRVRAHTCACVLLQPRPSHPRDA 108

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.5 bits (114), Expect = 5e-08
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 2/82 (2%)

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPDNPY--SANNYGKTPLYMAAKGRYSEMVIELL 124
             + +TALH AV H +   +  L      + Y    N+ G+T L++AA    +  V +L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 125 ETAHQCPMKAPTERQLCMLQQC 146
                  +          L   
Sbjct: 66  AAGAGVLVAERGGHTALHLACR 87

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.3 bits (103), Expect = 1e-06
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
            + +       T LH AV      V+++L K G D P +    G+TPL  A       + 
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILA 241

Query: 121 IELLE 125
             L  
Sbjct: 242 RLLRA 246

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (91), Expect = 5e-05
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 18/77 (23%)

Query: 21  TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH 80
           TPL +A +   + ++ +L++                GAD            T L  A+  
Sbjct: 194 TPLHLAVEAQAASVLELLLKA---------------GAD---PTARMYGGRTPLGSALLR 235

Query: 81  GNVHVVKILTKQGPDNP 97
            N  + ++L   G   P
Sbjct: 236 PNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (80), Expect = 0.001
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 9/57 (15%)

Query: 2   EEILELCPSLLLNVNAK---GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESG 55
             +LEL      +  A+   G TPL  A    +  +  +L        HG  EPE G
Sbjct: 205 ASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR------AHGAPEPEDG 255

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 50.1 bits (118), Expect = 2e-08
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 19/98 (19%)

Query: 16  NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALH 75
              G T L VAA  G+++++ +L+Q                  D   + + + +  T LH
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQ---------------ARYD---VNIKDYDGWTPLH 237

Query: 76  EAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK 113
            A   G     +IL +   D   + N  G+T   +A +
Sbjct: 238 AAAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADE 274

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 43.2 bits (100), Expect = 4e-06
 Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 1/83 (1%)

Query: 64  RMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL 123
                +       A   G+   V  L ++G D    AN  G T L+ A      +MV  L
Sbjct: 34  TKVKFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFL 92

Query: 124 LETAHQCPMKAPTERQLCMLQQC 146
           +E                     
Sbjct: 93  VENGANINQPDNEGWIPLHAAAS 115

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (103), Expect = 1e-06
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
             +       ++ALH A   G + +V+ L + G D     N +  TPL +A   R  +++
Sbjct: 168 ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 8e-06
 Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD---NPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
           +T LH AV  GN+  V  L              NN  +TPL++A       +V  L+   
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63

Query: 128 HQCPMKAPTERQLCM 142
                     +    
Sbjct: 64  ASPMALDRHGQTAAH 78

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (89), Expect = 9e-05
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 18/87 (20%)

Query: 1   MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR 60
           M ++L    + +      G + L  A+  G   +V  LV+                GAD 
Sbjct: 159 MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR---------------SGAD- 202

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVK 87
               + N   +T L  A     + +++
Sbjct: 203 --SSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (88), Expect = 1e-04
 Identities = 24/130 (18%), Positives = 36/130 (27%), Gaps = 14/130 (10%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
           GDTPL +A   G+   V  LV   +             G +   + + NN + T LH AV
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQG-----------GRE---LDIYNNLRQTPLHLAV 48

Query: 79  CHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTER 138
                 VV++L   G        +              + +   L   A           
Sbjct: 49  ITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY 108

Query: 139 QLCMLQQCTF 148
                     
Sbjct: 109 DGLTALHVAV 118

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.0 bits (102), Expect = 2e-06
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
             +++  T L  A   G+    K L     +     ++  + P  +A++  + ++V  LL
Sbjct: 151 AQDDKDETPLFLAAREGSYEASKALLDNFAN-REITDHMDRLPRDVASERLHHDIV-RLL 208

Query: 125 E 125
           +
Sbjct: 209 D 209

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.7 bits (83), Expect = 5e-04
 Identities = 13/62 (20%), Positives = 25/62 (40%)

Query: 85  VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ 144
           V+  L  QG +   + +  G+T L++AA+   ++    LL+       +  T R      
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 145 QC 146
             
Sbjct: 64  VA 65

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 34.8 bits (78), Expect = 0.002
 Identities = 32/168 (19%), Positives = 55/168 (32%), Gaps = 21/168 (12%)

Query: 3   EILELCPSLLLNVNAK----GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA 58
           +++    +    +NA     G+T L +AA+F  +D    L+     A   D    + + A
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 59  DRQ----------------MIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANN 102
                               +    ++  T L  A       +V+ L     D   +A+N
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADAD-INAADN 121

Query: 103 YGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFIL 150
            GKT L+ AA    +E V  LL        +   +     L       
Sbjct: 122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSY 169

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 2e-05
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMV 120
            +         TALH AV   N  +V +L K G D        G +P  +      + + 
Sbjct: 136 DVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWGRPSTRIQ 194

Query: 121 IELLE 125
            +L +
Sbjct: 195 QQLGQ 199

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 2e-05
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 3/83 (3%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPD---NPYSANNYGKTPLYMAAKGRYSEMVIELLETA 127
           ++ LH A+ H    +   + +Q           NN  +TPL++A      E+   LL   
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62

Query: 128 HQCPMKAPTERQLCMLQQCTFIL 150
               ++         L      L
Sbjct: 63  CDPELRDFRGNTPLHLACEQGCL 85

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (79), Expect = 0.002
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 14/66 (21%)

Query: 19 GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
          GD+ L +A       +   +++  K              A    +   NN + T LH AV
Sbjct: 2  GDSFLHLAIIHEEKALTMEVIRQVKGD-----------LAF---LNFQNNLQQTPLHLAV 47

Query: 79 CHGNVH 84
                
Sbjct: 48 ITNQPE 53

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (77), Expect = 0.003
 Identities = 5/40 (12%), Positives = 12/40 (30%), Gaps = 3/40 (7%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDN 96
           GAD         +  +         +  + + L +   +N
Sbjct: 168 GADV---NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.2 bits (84), Expect = 2e-04
 Identities = 16/121 (13%), Positives = 28/121 (23%), Gaps = 18/121 (14%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAV 78
            D     A K G  D V   V   +            +       ++   E        +
Sbjct: 2   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61

Query: 79  CHGNVHVVKILTKQGPDNPYS--------------ANNYGKTPLYMAAKGRYSEMVIELL 124
              + H +  L     +   S                  G T L        ++ +  LL
Sbjct: 62  NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD----NQAIKALL 117

Query: 125 E 125
           +
Sbjct: 118 Q 118

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (86), Expect = 2e-04
 Identities = 23/121 (19%), Positives = 36/121 (29%), Gaps = 20/121 (16%)

Query: 8   CPSLLLNVNAKGDTPLRVAAKF---GHSDIVSVLVQ---------------TAKIAQHGD 49
               L N +   +T L +A +        IV  LVQ                       +
Sbjct: 34  EKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 93

Query: 50  GEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPD--NPYSANNYGKTP 107
            E    +   +  I +AN    T L  A    + H  ++LT+      N +    Y    
Sbjct: 94  AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRL 153

Query: 108 L 108
           L
Sbjct: 154 L 154

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (83), Expect = 4e-04
 Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 7/89 (7%)

Query: 67  NNEKNTALHEAVCHGNVHVVKILTKQGPD-----NPYSANNYGKTPLYMAAK--GRYSEM 119
              K  +L EAV   ++  +      G D        + +   +T L++A +   R S  
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62

Query: 120 VIELLETAHQCPMKAPTERQLCMLQQCTF 148
           +++ L        K   +    +   C  
Sbjct: 63  IVDFLVQNSGNLDKQTGKGSTALHYCCLT 91

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (83), Expect = 4e-04
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 57  GADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRY 116
           GAD     M        LH A  H +  VV+ L  +   + ++ + + KT   ++     
Sbjct: 90  GADVNAKDMLKMTA---LHWATEHNHQEVVE-LLIKYGADVHTQSKFCKTAFDISIDNGN 145

Query: 117 SEMVIELLE 125
            ++  E+L+
Sbjct: 146 EDLA-EILQ 153

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.1 bits (76), Expect = 0.003
 Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 2/80 (2%)

Query: 69  EKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAH 128
           +    L EA   G    V+IL   G     + +  G +PL++AA+  +      LL    
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGV 58

Query: 129 QCPMKAPTERQLCMLQQCTF 148
               +   +R    +     
Sbjct: 59  SRDARTKVDRTPLHMAASEG 78

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 6e-04
 Identities = 16/78 (20%), Positives = 28/78 (35%)

Query: 71  NTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQC 130
              L  A   G+V  V+ L  +   +P + N +GKT L +   G  +  +  L + A   
Sbjct: 3   GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPN 62

Query: 131 PMKAPTERQLCMLQQCTF 148
                    +    +  F
Sbjct: 63  VQDTSGTSPVHDAARTGF 80

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (80), Expect = 0.001
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 61  QMIRMANNEKNTALHEAVCHGNVHVVKILTKQG 93
             +   N++ +TA   A  +G   VV ++   G
Sbjct: 124 SNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (76), Expect = 0.003
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 1/75 (1%)

Query: 72  TALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCP 131
             L  A   G++  +  L +   +   + N +G+T L +   G        LL  A+   
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 61

Query: 132 MKAPTERQLCMLQQC 146
                   +    + 
Sbjct: 62  KDRTGFAVIHDAARA 76

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (74), Expect = 0.004
 Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 14/123 (11%)

Query: 19  GDTPLRVAAKFGHSDIVSVLVQ--------------TAKIAQHGDGEPESGIGADRQMIR 64
               L  AA  G  + V  L++                ++   G       +        
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 65  MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELL 124
            A+    T               ++  +        + +G+ P+ +A +  + ++   L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 125 ETA 127
             A
Sbjct: 123 AAA 125

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	161
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.96
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.96
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.94
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.94
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.94
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.94
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.94
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.94
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.92
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.91
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.9
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.9
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.9
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.89
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.88
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.87
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.86
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.86
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.85
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.84
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.84
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.84
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.84
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.83
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.82
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.81
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.81
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.81
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.74
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.64

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.2e-29  Score=166.93  Aligned_cols=155  Identities=20%  Similarity=0.280  Sum_probs=129.2

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch----------------------
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA----------------------   58 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~----------------------   58 (161)
                      |+.+|+..+..++.+|.+|+||||+|+..|+.+++++|++.|++++..+.........                      
T Consensus        16 v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (229)
T d1ixva_          16 VQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK   95 (229)
T ss_dssp             HHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSC
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence            4678888899999999999999999999999999999999998766443222211100                      


Q ss_pred             -------------------------------hhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcH
Q 037410           59 -------------------------------DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTP  107 (161)
Q Consensus        59 -------------------------------~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~  107 (161)
                                                     ........+..|.||+|+|+..|+.++++.|+..++.+++.+|.+|.||
T Consensus        96 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~Tp  175 (229)
T d1ixva_          96 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP  175 (229)
T ss_dssp             CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCH
T ss_pred             ccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccccCCc
Confidence                                           0011234577899999999999999999999999877688999999999


Q ss_pred             HHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHHHhHHHHHHHHh
Q 037410          108 LYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQQCTFILLSLTR  155 (161)
Q Consensus       108 l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~~~~~~~~~l~~  155 (161)
                      ||+|+..++.+++++|++ .|++++.+|.+|+||+++|....+.+.|..
T Consensus       176 Lh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~~~~~~~Ll~  224 (229)
T d1ixva_         176 LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFFLN  224 (229)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSCHHHHHHHHH
T ss_pred             hhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhhHHHHHHHHH
Confidence            999999999999999997 599999999999999999887777766654

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.5e-28  Score=165.36  Aligned_cols=155  Identities=21%  Similarity=0.228  Sum_probs=128.9

Q ss_pred             hhHHHh--CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh--------------------
Q 037410            2 EEILEL--CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD--------------------   59 (161)
Q Consensus         2 ~~ll~~--~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~--------------------   59 (161)
                      +.||+.  .+..++.+|..|.||||+|+..|+.+++++|++.|++++..+..+.+++...                    
T Consensus        26 ~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~  105 (255)
T d1oy3d_          26 DFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP  105 (255)
T ss_dssp             HHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSC
T ss_pred             HHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhhhhccCchHHHHHHHhhccchh
Confidence            344443  3445788899999999999999999999999999998887766655443110                    


Q ss_pred             ------------------------------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           60 ------------------------------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        60 ------------------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                                                                ...++.++..|.||||+|+..++.+++++|++.++...
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~  185 (255)
T d1oy3d_         106 RDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN  185 (255)
T ss_dssp             CCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred             cccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhccccccc
Confidence                                                      12245678889999999999999999999999999856


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhh
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRY  156 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~  156 (161)
                      ...+..|.||||+|++.++.+++++|+++|++++.+|..|+||||+|   +...+++.|..+
T Consensus       186 ~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~  247 (255)
T d1oy3d_         186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH  247 (255)
T ss_dssp             CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT
T ss_pred             ccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            56778999999999999999999999999999999999999999996   566677777765

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1.4e-30  Score=156.57  Aligned_cols=108  Identities=21%  Similarity=0.175  Sum_probs=101.8

Q ss_pred             CcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccc
Q 037410           20 DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYS   99 (161)
Q Consensus        20 ~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~   99 (161)
                      .|||++|++.|+.+++++|++.|.+++.                  ++..|.||||+|+..++.+++++|++.|++ ++.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~------------------~~~~g~t~lh~A~~~~~~~~~~~ll~~g~d-in~   63 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNR------------------TLEGGRKPLHYAADCGQLEILEFLLLKGAD-INA   63 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCC------------------CSSSSCCTTHHHHHHSTTTHHHHHHHSSCT-TTC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhcccc------------------ccccccccccccccccccccccccccccce-eee
Confidence            4899999999999999999999988654                  788999999999999999999999999998 889


Q ss_pred             cCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410          100 ANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus       100 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      ++..|.||||+|+++|+.+++++|+++|++++.+|..|+||+|++..
T Consensus        64 ~d~~g~tpLh~A~~~~~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~~  110 (118)
T d1myoa_          64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN  110 (118)
T ss_dssp             CSSSCSCHHHHHHTTTCCHHHHHHHTTCCCSSSSSSSTCCCCCTCSS
T ss_pred             cccccccchhhhhhcCchhhhhhhhcccccceeeCCCCCCHHHHHhH
Confidence            99999999999999999999999999999999999999999998743

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.4e-28  Score=158.88  Aligned_cols=144  Identities=20%  Similarity=0.223  Sum_probs=101.1

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch---------------hhhhhhh
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA---------------DRQMIRM   65 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~---------------~~~~~~~   65 (161)
                      |+++|+..+..++.+|..|+||||+||..|+.+++++++..+......+.........               .+..++.
T Consensus        19 v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~   98 (223)
T d1uoha_          19 LKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA   98 (223)
T ss_dssp             HHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccccccccccccccccchhHHHhccCceeEe
Confidence            4678899999999999999999999999999999999999877665544443333211               1122345


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCC--------------------------------ccccCCCCCcHHHHHHh
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDN--------------------------------PYSANNYGKTPLYMAAK  113 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~--------------------------------~~~~~~~~~t~l~~A~~  113 (161)
                      .+..|.||||+|+..|+.+++++|++.|.+.                                ++.++..|.||||+|++
T Consensus        99 ~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~  178 (223)
T d1uoha_          99 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACD  178 (223)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred             eCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCCCCceeccccc
Confidence            6777778888888878888887777777651                                34445555666666666


Q ss_pred             CCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410          114 GRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus       114 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      .|+.+++++|+++|++++.+|..|+||+|+|
T Consensus       179 ~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A  209 (223)
T d1uoha_         179 EERVEEAKLLVSQGASIYIENKEEKTPLQVA  209 (223)
T ss_dssp             TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC
T ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence            6666666666666666666666666666653

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.5e-27  Score=155.55  Aligned_cols=119  Identities=28%  Similarity=0.324  Sum_probs=103.3

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------hhhhhhhcCC
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------RQMIRMANNE   69 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~   69 (161)
                      |...+..++.+|.+|+||||+|+.+|+.+++++|+++|.+++..+..+.+++...               ...++.++..
T Consensus        89 Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~  168 (223)
T d1uoha_          89 LLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE  168 (223)
T ss_dssp             HHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred             HhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCC
Confidence            3345678899999999999999999999999999999999888877776665321               2335678899


Q ss_pred             CccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh
Q 037410           70 KNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE  125 (161)
Q Consensus        70 g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~  125 (161)
                      |.||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+| +.|+.+++++|++
T Consensus       169 g~TpL~~Aa~~g~~~~v~~LL~~Gad-~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         169 GNTPLHLACDEERVEEAKLLVSQGAS-IYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             CCceeccccccCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            99999999999999999999999998 899999999999998 5799999999885

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.94  E-value=1.8e-27  Score=155.65  Aligned_cols=144  Identities=24%  Similarity=0.283  Sum_probs=121.3

Q ss_pred             hhHHHhCCccccc-cCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------------
Q 037410            2 EEILELCPSLLLN-VNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------------   59 (161)
Q Consensus         2 ~~ll~~~~~~~~~-~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------------   59 (161)
                      +.|+ +.+.+++. .|.+|.||||+||.+|+.+++++|++.|..++..+..........                     
T Consensus         6 ~~Ll-~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (209)
T d1ot8a_           6 SDLL-AQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLN   84 (209)
T ss_dssp             HHHH-HHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTT
T ss_pred             HHHH-HCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence            3444 45677876 589999999999999999999999999998877655544332110                     


Q ss_pred             ----------------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHH
Q 037410           60 ----------------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMA  111 (161)
Q Consensus        60 ----------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A  111 (161)
                                                  ...++.++..|.||+++++..+..++++.++..+.+ ++..|..|.||||+|
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~-~~~~d~~g~TpL~~A  163 (209)
T d1ot8a_          85 ARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHAN-RDAQDDKDETPLFLA  163 (209)
T ss_dssp             CCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred             cccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeecccccc-ccccccccccccchh
Confidence                                        122456788899999999999999999999999988 788999999999999


Q ss_pred             HhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410          112 AKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus       112 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      +..|+.+++++|+++|++++.+|..|+||+|+|...
T Consensus       164 ~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~  199 (209)
T d1ot8a_         164 AREGSYEASKALLDNFANREITDHMDRLPRDVASER  199 (209)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             ccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence            999999999999999999999999999999996443

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.94  E-value=2.2e-26  Score=156.04  Aligned_cols=148  Identities=20%  Similarity=0.199  Sum_probs=122.4

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------------------
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------------------   59 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------------------   59 (161)
                      ..++++|.+|.+|+||||+|+..|+.+++++|+++|++++..+..+.+.+...                           
T Consensus        62 ~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~  141 (277)
T d2fo1e1          62 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR  141 (277)
T ss_dssp             HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT
T ss_pred             HcCCCccccCCCCCeeeccccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhccccccccccccc
Confidence            45788999999999999999999999999999999999888766665553210                           


Q ss_pred             -----------------------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCC
Q 037410           60 -----------------------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYG  104 (161)
Q Consensus        60 -----------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~  104 (161)
                                                         ....+..+..|.||||+++..++.+++++++.....+.+.+|..|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g  221 (277)
T d2fo1e1         142 NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG  221 (277)
T ss_dssp             TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTC
T ss_pred             ccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccccccCCCC
Confidence                                               011234456789999999999999999987766555578899999


Q ss_pred             CcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHH
Q 037410          105 KTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLT  154 (161)
Q Consensus       105 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~  154 (161)
                      .||||+|++.|+.+++++|+++|++++.+|..|+||+|+|..   ..+.+.|.
T Consensus       222 ~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~  274 (277)
T d2fo1e1         222 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD  274 (277)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            999999999999999999999999999999999999999643   44555544

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.94  E-value=8.7e-27  Score=159.34  Aligned_cols=143  Identities=23%  Similarity=0.140  Sum_probs=118.3

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh----------------------
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD----------------------   59 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~----------------------   59 (161)
                      +.||+. +++++.+|.+|+||||+|+..|+.+++++|+++|.+....+.....++...                      
T Consensus        57 ~~Ll~~-Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~  135 (291)
T d1s70b_          57 LRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAV  135 (291)
T ss_dssp             HHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHC-CCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccchhhcccccCcccccc
Confidence            456654 688999999999999999999999999999999886555433332221000                      


Q ss_pred             --------------------h---------------------------------hhhhhhcCCCccHHHHHHhcCcHHHH
Q 037410           60 --------------------R---------------------------------QMIRMANNEKNTALHEAVCHGNVHVV   86 (161)
Q Consensus        60 --------------------~---------------------------------~~~~~~~~~g~t~l~~a~~~~~~~~~   86 (161)
                                          .                                 ......+..|.||||.|+..|+.+++
T Consensus       136 ~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~  215 (291)
T d1s70b_         136 NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL  215 (291)
T ss_dssp             CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred             cccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhh
Confidence                                0                                 00123456789999999999999999


Q ss_pred             HHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh
Q 037410           87 KILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC  146 (161)
Q Consensus        87 ~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~  146 (161)
                      +.|++.|++ ++.++..|.||||+|++.|+.+++++|+++|++++.+|..|+||+|+|..
T Consensus       216 ~~Ll~~g~d-in~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         216 KLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             HHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             cccccceec-ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            999999998 88899999999999999999999999999999999999999999999754

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.9e-27  Score=153.61  Aligned_cols=150  Identities=21%  Similarity=0.183  Sum_probs=123.9

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhh---------------------hhhhh
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADR---------------------QMIRM   65 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~   65 (161)
                      ..+..++.+|.+|+||||+|+..|+.+++++|++.|.+++..+..+..++...-                     .....
T Consensus        27 ~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  106 (221)
T d1iknd_          27 GDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA  106 (221)
T ss_dssp             --CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC
T ss_pred             hCCCCcccCCCCCCccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccc
Confidence            456788999999999999999999999999999999999888777766653211                     11223


Q ss_pred             hcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           66 ANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        66 ~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      ....|.||+|.|+..++.+++++++..++......+.+|.||||+|++.|+.+++++|+++|++++.+|.+|+||+|+|.
T Consensus       107 ~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~  186 (221)
T d1iknd_         107 TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTW  186 (221)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCT
T ss_pred             cccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHH
Confidence            34557899999999999999999999998844445568999999999999999999999999999999999999999964


Q ss_pred             ---hHHHHHHHHhh
Q 037410          146 ---CTFILLSLTRY  156 (161)
Q Consensus       146 ---~~~~~~~l~~~  156 (161)
                         ...+.+.|.++
T Consensus       187 ~~~~~~~~~~l~~~  200 (221)
T d1iknd_         187 GRPSTRIQQQLGQL  200 (221)
T ss_dssp             TSSCHHHHHHHHTT
T ss_pred             HCCCHHHHHHHHHc
Confidence               55566666554

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.5e-26  Score=144.11  Aligned_cols=133  Identities=18%  Similarity=0.215  Sum_probs=116.9

Q ss_pred             ChhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc
Q 037410            1 MEEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH   80 (161)
Q Consensus         1 ~~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~   80 (161)
                      |+.+|+..+.+++.+|..|+||||+|+ +|+.+++++|++.+.+++.                  .+..|.+|++.++..
T Consensus        18 vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~------------------~~~~~~~~l~~~~~~   78 (156)
T d1bd8a_          18 VRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNV------------------QDTSGTSPVHDAART   78 (156)
T ss_dssp             HHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHT
T ss_pred             HHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccccccc------------------ccccccccccccccc
Confidence            467888889999999999999999986 5889999999999887554                  677899999999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHH
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLT  154 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~  154 (161)
                      ++.++++.+++.+++ ++.++..|.||||+|++.|+.+++++|+ .|++++.+|.+|+||+|+|.   ...+.+.|.
T Consensus        79 ~~~~~~~~~l~~~~~-~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll  153 (156)
T d1bd8a_          79 GFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQ  153 (156)
T ss_dssp             TCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred             ccccccccccccccc-cccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            999999999999988 7889999999999999999999999887 68999999999999999963   334444444

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.5e-26  Score=140.21  Aligned_cols=110  Identities=17%  Similarity=0.208  Sum_probs=99.1

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      .+.++||+|+..|+.+++++|+++|.+++.                  ++..|.||+|+|+ .|+.+++++|++.|++ +
T Consensus         2 p~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~------------------~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~-~   61 (125)
T d1bi7b_           2 PSADWLATAAARGRVEEVRALLEAGANPNA------------------PNSYGRRPIQVMM-MGSARVAELLLLHGAE-P   61 (125)
T ss_dssp             CSTTHHHHHHHHTCHHHHHHHHTTTCCTTC------------------CCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-C
T ss_pred             CChhHHHHHHHCCCHHHHHHHHHcCCcccc------------------ccccccccccccc-cccccccccccccccc-c
Confidence            467899999999999999999999988654                  7889999999764 6999999999999998 7


Q ss_pred             cccCCCCC-cHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhH
Q 037410           98 YSANNYGK-TPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCT  147 (161)
Q Consensus        98 ~~~~~~~~-t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~  147 (161)
                      +.++..+. ||||+|++.|+.+++++|+++|++++.+|..|+||+|+|...
T Consensus        62 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~  112 (125)
T d1bi7b_          62 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL  112 (125)
T ss_dssp             CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccCCCCCHHHHHHHc
Confidence            77777765 699999999999999999999999999999999999997543

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=137.20  Aligned_cols=105  Identities=26%  Similarity=0.254  Sum_probs=97.2

Q ss_pred             cHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcccc
Q 037410           21 TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA  100 (161)
Q Consensus        21 t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  100 (161)
                      ++|+.||..|+.+++++|+++|.+++.                  +|..|.||||+|+..++.+++++|++.|++ .+.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~------------------~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~-~~~~   63 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSL------------------PNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAA   63 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCC
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccc------------------cccccccccccccccccccccccccccccc-cccc
Confidence            689999999999999999999988665                  788999999999999999999999999988 8899


Q ss_pred             CCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC-cccchHHHH
Q 037410          101 NNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP-TERQLCMLQ  144 (161)
Q Consensus       101 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~l~~~  144 (161)
                      |.+|+||||+|+.+|+.+++++|+++|++++..+. .++||++++
T Consensus        64 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~  108 (130)
T d1ycsb1          64 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC  108 (130)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred             cccCcccccccchhhHHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence            99999999999999999999999999999998765 588988763

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=145.44  Aligned_cols=146  Identities=16%  Similarity=0.151  Sum_probs=120.4

Q ss_pred             hCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh---------------------------
Q 037410            7 LCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD---------------------------   59 (161)
Q Consensus         7 ~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------------------------   59 (161)
                      ..+++++.+|..|+||||+|+..|+.+++++|+++|+..+.....+.......                           
T Consensus        28 ~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (228)
T d1k1aa_          28 QGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARN  107 (228)
T ss_dssp             HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCC
T ss_pred             HCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccccccccccchhhhhhccccccccccccc
Confidence            56788999999999999999999999999999999987666544432222100                           


Q ss_pred             -------------------h-------hhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410           60 -------------------R-------QMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK  113 (161)
Q Consensus        60 -------------------~-------~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~  113 (161)
                                         .       .........+.++++.|+..+...+++.++..+.. .+.++..|.||||+|+.
T Consensus       108 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~  186 (228)
T d1k1aa_         108 YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGSSALHSASG  186 (228)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHH
T ss_pred             cccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccc-cccccccCcchHHHHHH
Confidence                               0       00122345678999999999999999999999987 78889999999999999


Q ss_pred             CCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHHHHHHH
Q 037410          114 GRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTFILLSL  153 (161)
Q Consensus       114 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~l  153 (161)
                      .|+.+++++|+++|++++.+|.+|+||||+|........+
T Consensus       187 ~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~div  226 (228)
T d1k1aa_         187 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL  226 (228)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCcccc
Confidence            9999999999999999999999999999998666555544

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=4.5e-25  Score=151.88  Aligned_cols=135  Identities=18%  Similarity=0.163  Sum_probs=106.6

Q ss_pred             cccccc-CCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh-------------------hhhhhhhcCC
Q 037410           10 SLLLNV-NAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD-------------------RQMIRMANNE   69 (161)
Q Consensus        10 ~~~~~~-~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~   69 (161)
                      .++|.. |.+|+||||+||..|+.++|++|+++|++++..+..+.++++..                   .......+..
T Consensus        97 ~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~d~~  176 (301)
T d1sw6a_          97 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM  176 (301)
T ss_dssp             CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTT
T ss_pred             CCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhcccc
Confidence            455655 89999999999999999999999999999999888888776432                   1123445678


Q ss_pred             CccHHHHHHhcCc----HH--------HHHHHHHcCCCC------------------------------------ccccC
Q 037410           70 KNTALHEAVCHGN----VH--------VVKILTKQGPDN------------------------------------PYSAN  101 (161)
Q Consensus        70 g~t~l~~a~~~~~----~~--------~~~~L~~~g~~~------------------------------------~~~~~  101 (161)
                      |+||||.++..+.    ..        ++..+...+...                                    ++.+|
T Consensus       177 g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D  256 (301)
T d1sw6a_         177 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQD  256 (301)
T ss_dssp             CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCC
T ss_pred             cCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCccCCC
Confidence            8999998765332    22        223333333221                                    46778


Q ss_pred             CCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH
Q 037410          102 NYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ  144 (161)
Q Consensus       102 ~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~  144 (161)
                      ..|+||||+|++.|+.+++++|+++|++++.+|..|+||+++|
T Consensus       257 ~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A  299 (301)
T d1sw6a_         257 SNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG  299 (301)
T ss_dssp             TTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHc
Confidence            9999999999999999999999999999999999999999986

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=4.6e-24  Score=143.13  Aligned_cols=104  Identities=26%  Similarity=0.228  Sum_probs=95.1

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      ....++.+|..|.||||+|+..++.+++++|++.+...+.                 ..+..|.||||+|+..++.++++
T Consensus       147 ~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~-----------------~~~~~g~TpL~~A~~~~~~~~v~  209 (255)
T d1oy3d_         147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK-----------------PEPTCGRTPLHLAVEAQAASVLE  209 (255)
T ss_dssp             GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-----------------CCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             cCcccccccccCcccccccccccccccccchhcccccccc-----------------cccccccccccccccccHHHHHH
Confidence            3556778899999999999999999999999999887654                 24678999999999999999999


Q ss_pred             HHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           88 ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        88 ~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      +|++.|++ ++.+|..|.||||+|+..++.+++++|+++||+
T Consensus       210 ~Ll~~gad-in~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         210 LLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             HHHHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            99999988 889999999999999999999999999999996

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.7e-23  Score=147.53  Aligned_cols=128  Identities=23%  Similarity=0.234  Sum_probs=108.0

Q ss_pred             CCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHH
Q 037410            8 CPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVK   87 (161)
Q Consensus         8 ~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~   87 (161)
                      .....+..|..|.||++.|+..++.+++++|+++|.+++.                  .+..+.||||.++..+..++++
T Consensus       253 ~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~------------------~~~~~~t~L~~~~~~~~~~~~~  314 (408)
T d1n11a_         253 KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA------------------TTRMGYTPLHVASHYGNIKLVK  314 (408)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCSSCCCHHHHHHHSSCSHHHH
T ss_pred             cccccccccCCCCChhhhhhhcCcHHHHHHHHHCCCcccc------------------ccccccccchhhcccCcceeee
Confidence            4455666677777777777777777777777777766443                  5778899999999999999999


Q ss_pred             HHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHH
Q 037410           88 ILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLT  154 (161)
Q Consensus        88 ~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~  154 (161)
                      .+++.|++ ++.+|.+|.||||+|++.|+.+++++|+++|++++.+|.+|+||+|+|   +...+++.|.
T Consensus       315 ~ll~~g~~-in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~  383 (408)
T d1n11a_         315 FLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK  383 (408)
T ss_dssp             HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             eecccccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            99999988 889999999999999999999999999999999999999999999997   4445555443

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=1.1e-23  Score=131.53  Aligned_cols=96  Identities=24%  Similarity=0.242  Sum_probs=87.8

Q ss_pred             cCCCCCcHHHHHHHh---CCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHH
Q 037410           15 VNAKGDTPLRVAAKF---GHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTK   91 (161)
Q Consensus        15 ~~~~g~t~lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~   91 (161)
                      .+..|+||||+|++.   ++.+++++|+++|++++.                  ++..|.||||+|+..|+.+++++|++
T Consensus        41 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~------------------~d~~g~TpLh~A~~~~~~~~v~~Ll~  102 (154)
T d1dcqa1          41 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK------------------QTGKGSTALHYCCLTDNAECLKLLLR  102 (154)
T ss_dssp             CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhh------------------hhhhhccccccccccccccccccccc
Confidence            367799999999985   678999999999988654                  78999999999999999999999999


Q ss_pred             cCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           92 QGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        92 ~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      .|++ ++.+|..|.||||+|++.|+.+++++|++.++.
T Consensus       103 ~gad-~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1         103 GKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             TTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             cCcc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence            9998 789999999999999999999999999998743

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.3e-23  Score=129.49  Aligned_cols=130  Identities=19%  Similarity=0.204  Sum_probs=112.5

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      |.+.+++++.+|.+|+||||+|+ .|+.+++++|++.|++++.                  .+..+.++++.++..+..+
T Consensus        20 Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~------------------~~~~~~~~l~~~~~~~~~~   80 (156)
T d1ihba_          20 LLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDL------------------KDRTGFAVIHDAARAGFLD   80 (156)
T ss_dssp             HTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHH
T ss_pred             HHHCCCCcCccCCcccccccccc-ccccccccccccccccccc------------------ccccCcccccccccccccc
Confidence            33457889999999999999886 7899999999999887544                  6888999999999999999


Q ss_pred             HHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCC-CCCCCCCcccchHHHHH---hHHHHHHHH
Q 037410           85 VVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAH-QCPMKAPTERQLCMLQQ---CTFILLSLT  154 (161)
Q Consensus        85 ~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~~~t~l~~~~---~~~~~~~l~  154 (161)
                      +++.++..+.. .+..+..|.+|+++|+..++.+++++|+++++ +.+.+|..|+||+|+|.   ...+.+.|.
T Consensus        81 ~~~~l~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll  153 (156)
T d1ihba_          81 TLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ  153 (156)
T ss_dssp             HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             ccccccccccc-ccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            99999999987 78889999999999999999999999999986 88999999999999964   344444444

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=3.4e-23  Score=129.07  Aligned_cols=126  Identities=20%  Similarity=0.248  Sum_probs=97.6

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.||+.. +..+ .|..|+||||+|+..++.++++.++.......                  ..+..+.++++.++...
T Consensus        19 ~~LL~~g-a~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~   78 (153)
T d1awcb_          19 RILMANG-APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD------------------ARTKVDRTPLHMAASEG   78 (153)
T ss_dssp             HHHHHHT-CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT------------------CCCTTCCCHHHHHHHHT
T ss_pred             HHHHHcC-CCcc-cccCCCcccccccccccccccccccccccccc------------------ccccccccccccccccc
Confidence            3444443 3333 46666666666666666666666665544322                  24556778888899999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHhHH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQCTF  148 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~  148 (161)
                      +.+++++++..+.+ .+.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|....
T Consensus        79 ~~~~~~~l~~~~~~-~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g  144 (153)
T d1awcb_          79 HANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG  144 (153)
T ss_dssp             CHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             cceeeecccccCCc-cccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcC
Confidence            99999999999887 7789999999999999999999999999999999999999999999975443

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2.2e-22  Score=125.53  Aligned_cols=124  Identities=16%  Similarity=0.047  Sum_probs=102.0

Q ss_pred             cHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhc---CcHHHHHHHHHcCCCCc
Q 037410           21 TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCH---GNVHVVKILTKQGPDNP   97 (161)
Q Consensus        21 t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~L~~~g~~~~   97 (161)
                      ..|+.|++.++...+..++..|.+......            ....+..|.||||+|+..   +..+++++|++.|++ +
T Consensus         8 ~~L~~Av~~~dl~~l~~~~~~g~d~~~~~~------------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-i   74 (154)
T d1dcqa1           8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIP------------LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-L   74 (154)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCC------------CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-T
T ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCcCCCCC------------cccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCC-h
Confidence            346688899999988888888766443110            112366789999999964   678999999999998 8


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHH---HhHHHHHHHHhhh
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQ---QCTFILLSLTRYS  157 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~---~~~~~~~~l~~~~  157 (161)
                      +.+|..|.||||+|++.|+.+++++|+++|++++.+|..|+||+|+|   +...+...|.+..
T Consensus        75 n~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~  137 (154)
T d1dcqa1          75 DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQAL  137 (154)
T ss_dssp             TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             hhhhhhhccccccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999996   4455666666644

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.5e-23  Score=124.45  Aligned_cols=106  Identities=25%  Similarity=0.241  Sum_probs=91.2

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.++ ..+.+++.+|.+|+||||+|+..|+.+++++|++.|.+.+.                  +|..|+||||+|+..|
T Consensus        18 ~~Ll-~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~------------------~d~~g~tpLh~A~~~g   78 (130)
T d1ycsb1          18 QRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------------------ADSDGWTPLHCAASCN   78 (130)
T ss_dssp             HHHT-STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHTT
T ss_pred             HHHH-HcCCCcccccccccccccccccccccccccccccccccccc------------------ccccCcccccccchhh
Confidence            3444 45788999999999999999999999999999999887554                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccC-CCCCcHHHHH--HhCCChHHHHHHHhcC
Q 037410           82 NVHVVKILTKQGPDNPYSAN-NYGKTPLYMA--AKGRYSEMVIELLETA  127 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~-~~~~t~l~~A--~~~~~~~~~~~Ll~~g  127 (161)
                      +.+++++|+++|++ ++..+ ..+.||++++  .+.|+.+++++|++.+
T Consensus        79 ~~~~v~~Ll~~ga~-v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          79 NVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             CHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHHcChHHHHHHHHhHH
Confidence            99999999999998 56554 4588887765  5678999999998754

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-23  Score=125.62  Aligned_cols=103  Identities=17%  Similarity=0.258  Sum_probs=90.9

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCc-cHHHHHHhc
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKN-TALHEAVCH   80 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~a~~~   80 (161)
                      +.++ ..+.+++.+|..|+||+|+|+ .|+.+++++|+++|.+++.                  ++..+. +|||+|+..
T Consensus        20 ~~Ll-~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~------------------~~~~~~~~~L~~A~~~   79 (125)
T d1bi7b_          20 RALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------------------ADPATLTRPVHDAARE   79 (125)
T ss_dssp             HHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC------------------CCTTTCCCHHHHHHHH
T ss_pred             HHHH-HcCCccccccccccccccccc-ccccccccccccccccccc------------------cccccccccccccccc
Confidence            4455 457889999999999999775 7999999999999988655                  555554 799999999


Q ss_pred             CcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHh
Q 037410           81 GNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE  125 (161)
Q Consensus        81 ~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~  125 (161)
                      |+.+++++|++.|++ ++.+|..|.||||+|+++|+.+++++|++
T Consensus        80 g~~~~v~~Ll~~ga~-~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          80 GFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             TCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccc-cccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999988 88999999999999999999999999875

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.1e-22  Score=134.80  Aligned_cols=122  Identities=18%  Similarity=0.181  Sum_probs=96.6

Q ss_pred             cccCCCCCcHHHHHHHhCCHHHHHHHHHh-hHhhhcCCCCCCCccch-------------------hhhhhhhhcCCCcc
Q 037410           13 LNVNAKGDTPLRVAAKFGHSDIVSVLVQT-AKIAQHGDGEPESGIGA-------------------DRQMIRMANNEKNT   72 (161)
Q Consensus        13 ~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~g~t   72 (161)
                      ...+..|.||||+|+++|+.+++++|++. |.+++..+..+......                   .+..++.++..|.|
T Consensus       142 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t  221 (285)
T d1wdya_         142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT  221 (285)
T ss_dssp             HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred             hhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCC
Confidence            34456799999999999999999999975 56666655444332211                   01123456778999


Q ss_pred             HHHHHHhcCcHHHHHHHHHc-CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCC
Q 037410           73 ALHEAVCHGNVHVVKILTKQ-GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAP  135 (161)
Q Consensus        73 ~l~~a~~~~~~~~~~~L~~~-g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~  135 (161)
                      |||+|+..|+.+++++|++. |.+ ++.+|.+|.||||+|+++++.+++++|+++|++++.+|.
T Consensus       222 ~L~~a~~~~~~~~v~~lL~~~g~d-in~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         222 PLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             ccchhhhcCcHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence            99999999999999999986 555 888999999999999999999999999999999998874

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.9e-21  Score=129.16  Aligned_cols=151  Identities=23%  Similarity=0.217  Sum_probs=110.9

Q ss_pred             HHhCCccccccC-CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccch-------------------------
Q 037410            5 LELCPSLLLNVN-AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGA-------------------------   58 (161)
Q Consensus         5 l~~~~~~~~~~~-~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~-------------------------   58 (161)
                      |...+++++.++ ..|+||||+|+..|+.+++++|++.+......+.........                         
T Consensus        24 Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (285)
T d1wdya_          24 LLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF  103 (285)
T ss_dssp             HHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred             HHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchhhhhccccccccc
Confidence            334567887665 469999999999999999999999887654443322211100                         


Q ss_pred             ---------------------------------hhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHc-------------
Q 037410           59 ---------------------------------DRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQ-------------   92 (161)
Q Consensus        59 ---------------------------------~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~-------------   92 (161)
                                                       ...........|.||||+|+..|+.+++++|++.             
T Consensus       104 ~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~  183 (285)
T d1wdya_         104 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR  183 (285)
T ss_dssp             TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred             CCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCC
Confidence                                             0011234455688999999998887777776654             


Q ss_pred             -------------------------CCCCccccCCCCCcHHHHHHhCCChHHHHHHHh-cCCCCCCCCCcccchHHHH--
Q 037410           93 -------------------------GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLE-TAHQCPMKAPTERQLCMLQ--  144 (161)
Q Consensus        93 -------------------------g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~l~~~--  144 (161)
                                               |++ ++.++..|.||||+|++.++.+++++|++ .|++++.+|..|+||||+|  
T Consensus       184 ~~~~~~~~~~~~~~~~~i~~~Li~~ga~-~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~  262 (285)
T d1wdya_         184 NALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE  262 (285)
T ss_dssp             CHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHH
T ss_pred             cccccccccccchHHHHHHHHHHHCCCC-CCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence                                     333 45567789999999999999999999997 4899999999999999995  


Q ss_pred             -HhHHHHHHHHhh
Q 037410          145 -QCTFILLSLTRY  156 (161)
Q Consensus       145 -~~~~~~~~l~~~  156 (161)
                       +...+.+.|.++
T Consensus       263 ~~~~eiv~~Ll~~  275 (285)
T d1wdya_         263 LKLKKIAELLCKR  275 (285)
T ss_dssp             TTCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHC
Confidence             445566666654

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=2.1e-23  Score=124.85  Aligned_cols=91  Identities=24%  Similarity=0.281  Sum_probs=82.7

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.|+ ..+.+++.+|..|+||||+|+..|+.++++++++.|.+++.                  ++..|.||||+|+..|
T Consensus        19 ~~Ll-~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~------------------~d~~g~tpLh~A~~~~   79 (118)
T d1myoa_          19 KDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------------------PDKHHITPLLSAVYEG   79 (118)
T ss_dssp             HHHH-TTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC------------------CSSSCSCHHHHHHTTT
T ss_pred             HHHH-Hhhhccccccccccccccccccccccccccccccccceeee------------------cccccccchhhhhhcC
Confidence            4455 45788999999999999999999999999999999988554                  7889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAA  112 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~  112 (161)
                      +.+++++|++.|++ ++.+|..|.||||+|.
T Consensus        80 ~~~~v~~Ll~~Gad-~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          80 HVSCVKLLLSKGAD-KTVKGPDGLTALEATD  109 (118)
T ss_dssp             CCHHHHHHHTTCCC-SSSSSSSTCCCCCTCS
T ss_pred             chhhhhhhhccccc-ceeeCCCCCCHHHHHh
Confidence            99999999999998 8899999999999884

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.85  E-value=5.4e-21  Score=124.47  Aligned_cols=102  Identities=19%  Similarity=0.193  Sum_probs=93.6

Q ss_pred             hHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCc
Q 037410            3 EILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGN   82 (161)
Q Consensus         3 ~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~   82 (161)
                      ++|...+..++.++..|+|||++|+..+..++++.++..+..++.                  .+..|.||||+|+..|+
T Consensus       107 ~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~------------------~d~~g~TpL~~A~~~g~  168 (209)
T d1ot8a_         107 EDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA------------------QDDKDETPLFLAAREGS  168 (209)
T ss_dssp             HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTC
T ss_pred             hhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccc------------------cccccccccchhccccH
Confidence            455667788889999999999999999999999999999887554                  68899999999999999


Q ss_pred             HHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHH
Q 037410           83 VHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIEL  123 (161)
Q Consensus        83 ~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L  123 (161)
                      .+++++|++.|++ ++.+|..|.||||+|+++|+.++|++|
T Consensus       169 ~~~v~~Ll~~gad-~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         169 YEASKALLDNFAN-REITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999998 889999999999999999999999976

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-20  Score=133.59  Aligned_cols=142  Identities=22%  Similarity=0.242  Sum_probs=120.8

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchh----------------------
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGAD----------------------   59 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~----------------------   59 (161)
                      +.|++ .+++++..|..|+||||+||..|+.+++++|+++|++++..+..+.+++...                      
T Consensus        17 ~~Ll~-~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~   95 (408)
T d1n11a_          17 KNLLQ-RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLA   95 (408)
T ss_dssp             HHHHH-TTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCC
T ss_pred             HHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhhhccccc
Confidence            45554 4788999999999999999999999999999999999888777766654311                      


Q ss_pred             --------------------------hhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHh
Q 037410           60 --------------------------RQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAK  113 (161)
Q Consensus        60 --------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~  113 (161)
                                                .......+..+.++++.|+..++.++++.|++.++. ++..+..+.+||++|+.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~-~~~~~~~~~~~L~~A~~  174 (408)
T d1n11a_          96 TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVH  174 (408)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSCCCHHHHHHH
T ss_pred             cccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCcCchHHHHHHH
Confidence                                      011233466788999999999999999999999988 78888999999999999


Q ss_pred             CCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410          114 GRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus       114 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      .++.+++++|+++|++++..+..|.||++++.
T Consensus       175 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  206 (408)
T d1n11a_         175 HNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAA  206 (408)
T ss_dssp             TTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHH
T ss_pred             cCCHHHHHHHHhcCCcccccCCCCCCcchhhh
Confidence            99999999999999999999999999998843

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.7e-21  Score=118.82  Aligned_cols=116  Identities=20%  Similarity=0.181  Sum_probs=102.7

Q ss_pred             cHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCcccc
Q 037410           21 TPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSA  100 (161)
Q Consensus        21 t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  100 (161)
                      +|||+||..|+.+++++|+++|++++.                  .|..|.||||+|+ .++.+++++|++.|++ ++..
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~------------------~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~-~~~~   62 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNA------------------QNGFGRTALQVMK-LGNPEIARRLLLRGAN-PDLK   62 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTC------------------CCTTSCCHHHHCC-SSCHHHHHHHHHTTCC-TTCC
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCc------------------cCCcccccccccc-cccccccccccccccc-cccc
Confidence            799999999999999999999988664                  7889999999876 6899999999999998 8889


Q ss_pred             CCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410          101 NNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus       101 ~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      +..+.++++.++..+..++++.|++.+.+++..+..|.+|++++.   .......|...
T Consensus        63 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~  121 (156)
T d1ihba_          63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH  121 (156)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             cccCccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999999853   33444444443

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.9e-20  Score=116.98  Aligned_cols=104  Identities=25%  Similarity=0.265  Sum_probs=92.8

Q ss_pred             hhHHHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcC
Q 037410            2 EEILELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHG   81 (161)
Q Consensus         2 ~~ll~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~   81 (161)
                      +.++ ..+..++..+..|.+|+++++..++.++++++++.|.+++.                  ++..|.||||+|+..|
T Consensus        52 ~~Ll-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~------------------~~~~~~t~L~~A~~~~  112 (156)
T d1bd8a_          52 LELL-KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNV------------------PDGTGALPIHLAVQEG  112 (156)
T ss_dssp             HHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHHT
T ss_pred             cccc-ccccccccccccccccccccccccccccccccccccccccc------------------ccCCCCeeeccccccc
Confidence            3445 44677888999999999999999999999999999887554                  6889999999999999


Q ss_pred             cHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhc
Q 037410           82 NVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLET  126 (161)
Q Consensus        82 ~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~  126 (161)
                      +.+++++|+ .|++ ++.+|.+|.||||+|++.|+.+++++|++|
T Consensus       113 ~~~i~~~L~-~~~~-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         113 HTAVVSFLA-AESD-LHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHH-TTSC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccc-cccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            999999887 6776 788999999999999999999999999987

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.84  E-value=6.1e-23  Score=143.67  Aligned_cols=114  Identities=20%  Similarity=0.160  Sum_probs=69.7

Q ss_pred             ccccCCCCCcHHHHHHHhCCHHHHHH---HHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHH
Q 037410           12 LLNVNAKGDTPLRVAAKFGHSDIVSV---LVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKI   88 (161)
Q Consensus        12 ~~~~~~~g~t~lh~A~~~g~~~~v~~---Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~   88 (161)
                      ++.++..|.||||+||+.|+.+++++   |++.|+.++.                  ++..|.||||+|+..|+.+++++
T Consensus        83 ~~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~------------------~~~~g~taL~~Aa~~G~~~~v~~  144 (346)
T d2ajaa1          83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKV------------------IQAENYQAFRLAAENGHLHVLNR  144 (346)
T ss_dssp             HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--------------------CHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HHhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccc------------------cCCCCCCHHHHHHHCCCHHHHHH
Confidence            34456667777777777777665554   5555655433                  56667777777777777777777


Q ss_pred             HHHcCCCCccccC--CCCCcHHHHHHhCCChHHHHHHHhcCCCC---CCCCCcccchHHHH
Q 037410           89 LTKQGPDNPYSAN--NYGKTPLYMAAKGRYSEMVIELLETAHQC---PMKAPTERQLCMLQ  144 (161)
Q Consensus        89 L~~~g~~~~~~~~--~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~~~t~l~~~  144 (161)
                      |++.|++ ++..+  ..|.||||+|++.|+.+++++|+++|+..   +..+..+.||++.|
T Consensus       145 Ll~~g~~-~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A  204 (346)
T d2ajaa1         145 LCELAPT-EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA  204 (346)
T ss_dssp             HHHSCTT-THHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCC-ccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHH
Confidence            7777765 44443  34667777777777777777777766543   22334445555553

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.84  E-value=2.1e-23  Score=146.02  Aligned_cols=113  Identities=19%  Similarity=0.192  Sum_probs=91.0

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      |...++.++.+|.+|+||||+||+.|+.++|++|++.|++++.                ...+..|.||||+|+..|+.+
T Consensus       112 L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~----------------~~~~~~g~t~L~~Aa~~g~~~  175 (346)
T d2ajaa1         112 LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM----------------AMIQAENYHAFRLAAENGHLH  175 (346)
T ss_dssp             C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH----------------HHHSHHHHHHHHHHHHTTCHH
T ss_pred             HHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc----------------cccccCCCChhHHHHHHhhHH
Confidence            4567788999999999999999999999999999999987653                112356899999999999999


Q ss_pred             HHHHHHHcCCCCc--cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCC
Q 037410           85 VVKILTKQGPDNP--YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMK  133 (161)
Q Consensus        85 ~~~~L~~~g~~~~--~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~  133 (161)
                      ++++|++.|+...  +..+..+.||++.|+++|+.+++++|+++|++++..
T Consensus       176 iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~  226 (346)
T d2ajaa1         176 VLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYA  226 (346)
T ss_dssp             HHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHH
T ss_pred             HHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchH
Confidence            9999999987521  233456778888999999999999999998765433

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.83  E-value=1.6e-20  Score=127.94  Aligned_cols=109  Identities=23%  Similarity=0.247  Sum_probs=101.5

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCc
Q 037410           18 KGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNP   97 (161)
Q Consensus        18 ~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~   97 (161)
                      ++.|+|+.||..|+.++|++|++.|++++.                  .|..|.||||+|+..|+.+++++|++++++ .
T Consensus        39 ~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~------------------~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~-~   99 (291)
T d1s70b_          39 DDGAVFLAACSSGDTEEVLRLLERGADINY------------------ANVDGLTALHQACIDDNVDMVKFLVENGAN-I   99 (291)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHHCCCTTC------------------BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred             CCchHHHHHHHcCCHHHHHHHHHCCCCCCc------------------cCCCCCcHHHHHHhcCCceeeeeecccccc-c
Confidence            466999999999999999999999988664                  789999999999999999999999999988 6


Q ss_pred             cccCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH
Q 037410           98 YSANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ  145 (161)
Q Consensus        98 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~  145 (161)
                      ...+..+.+||+.++..++.++++.|+++|+..+..+..+.++++++.
T Consensus       100 ~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~  147 (291)
T d1s70b_         100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAE  147 (291)
T ss_dssp             TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred             ccccccccccccccccccccchhhcccccCcccccccccCcccccccc
Confidence            778889999999999999999999999999999999999999998843

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.82  E-value=7.5e-21  Score=128.48  Aligned_cols=122  Identities=20%  Similarity=0.152  Sum_probs=97.8

Q ss_pred             ccccC-CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHH
Q 037410           12 LLNVN-AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILT   90 (161)
Q Consensus        12 ~~~~~-~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~   90 (161)
                      ++..+ ..|+||||+||..|+.+++++|+.+....-.          ..+..++.+|..|.||||+|+..|+.+++++|+
T Consensus        25 ~n~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l----------~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll   94 (277)
T d2fo1e1          25 VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI----------AAGADVNAMDCDENTPLMLAVLARRRRLVAYLM   94 (277)
T ss_dssp             TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHH----------HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             CCcCCCCCCccHHHHHHHcCCHHHHHHHHhcchhHHH----------HcCCCccccCCCCCeeecccccccccccccccc
Confidence            44444 4599999999999999999888765432100          001114458899999999999999999999999


Q ss_pred             HcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcC---CCCCCCCCcccchHHHH
Q 037410           91 KQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETA---HQCPMKAPTERQLCMLQ  144 (161)
Q Consensus        91 ~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~l~~~  144 (161)
                      ++|++ ++.++..|.||+++|...++.++++.+...+   ..++..+..+.++.+.+
T Consensus        95 ~~Gad-~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  150 (277)
T d2fo1e1          95 KAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV  150 (277)
T ss_dssp             HTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred             ccccc-cccccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHH
Confidence            99998 8889999999999999999999999888765   56777788888887663

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.6e-19  Score=116.60  Aligned_cols=126  Identities=25%  Similarity=0.263  Sum_probs=100.9

Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCC
Q 037410           17 AKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDN   96 (161)
Q Consensus        17 ~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~   96 (161)
                      ++|+||||+||.+|+.++++.|++......              ..++.+|..|.||||+|+..|+.+++++|++.|+..
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g--------------~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~   66 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGG--------------RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP   66 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTT--------------CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCC--------------CCCCccCCCCCccceehhcccccccccccccccccc
Confidence            469999999999999999999987432211              013457889999999999999999999999988751


Q ss_pred             ----------------------------------------------------------------------ccccCCCCCc
Q 037410           97 ----------------------------------------------------------------------PYSANNYGKT  106 (161)
Q Consensus        97 ----------------------------------------------------------------------~~~~~~~~~t  106 (161)
                                                                                            .......+.+
T Consensus        67 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  146 (228)
T d1k1aa_          67 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRS  146 (228)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCC
T ss_pred             cccccccccccccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhh
Confidence                                                                                  1223446889


Q ss_pred             HHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHH---hHHHHHHHHhh
Q 037410          107 PLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQ---CTFILLSLTRY  156 (161)
Q Consensus       107 ~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~---~~~~~~~l~~~  156 (161)
                      +++.|+..+...+++.++++|...+.++..|+||++++.   ...+++.|..+
T Consensus       147 ~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~  199 (228)
T d1k1aa_         147 PLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS  199 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred             HHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHC
Confidence            999999999999999999999999999999999999965   44455555443

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=3.1e-20  Score=122.41  Aligned_cols=104  Identities=18%  Similarity=0.201  Sum_probs=89.6

Q ss_pred             HHhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHH
Q 037410            5 LELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVH   84 (161)
Q Consensus         5 l~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~   84 (161)
                      +...+...+..|..|+||||+|+..|+.+++++|++.+...                 ++.++.+|.||||+|+..|+.+
T Consensus       124 l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~-----------------in~~d~~g~TpLh~A~~~~~~~  186 (229)
T d1ixva_         124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA-----------------VNWQDKQGWTPLFHALAEGHGD  186 (229)
T ss_dssp             HHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCC-----------------SCCCCTTSCCHHHHHHHTTCHH
T ss_pred             hhhhcccccccCCCCCCccchhhhccccccccccccccccc-----------------ccccccccCCchhhhcccccHH
Confidence            44556677778899999999999999999999999876421                 3347889999999999999999


Q ss_pred             HHHHHHHc-CCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           85 VVKILTKQ-GPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        85 ~~~~L~~~-g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                      ++++|++. |++ ++.+|..|.|||++|+.   .+++++|+++|+|
T Consensus       187 ~v~~Ll~~~gad-~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         187 AAVLLVEKYGAE-YDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             HHHHHHHHHCCC-SCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             HHHHHHHhcCCC-CCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            99999975 777 88999999999999984   5899999999986

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=2.2e-19  Score=111.48  Aligned_cols=117  Identities=21%  Similarity=0.220  Sum_probs=101.5

Q ss_pred             CcHHHHHHHhCCHHHHHHHHHhhHhhhcCCCCCCCccchhhhhhhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccc
Q 037410           20 DTPLRVAAKFGHSDIVSVLVQTAKIAQHGDGEPESGIGADRQMIRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYS   99 (161)
Q Consensus        20 ~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~   99 (161)
                      .||||.||+.|+.+++++|+++|++.+                   .+..|.||||+|+..++.++++.++..... ...
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-------------------~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~-~~~   62 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-------------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDA   62 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-------------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTC
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-------------------cccCCCcccccccccccccccccccccccc-ccc
Confidence            499999999999999999999987643                   478899999999999999999999888876 566


Q ss_pred             cCCCCCcHHHHHHhCCChHHHHHHHhcCCCCCCCCCcccchHHHHHh---HHHHHHHHhh
Q 037410          100 ANNYGKTPLYMAAKGRYSEMVIELLETAHQCPMKAPTERQLCMLQQC---TFILLSLTRY  156 (161)
Q Consensus       100 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~---~~~~~~l~~~  156 (161)
                      .+..+.++++.++...+.++++++.++|++.+.++..|+||||++..   ..+++.|..+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~  122 (153)
T d1awcb_          63 RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY  122 (153)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cccccccccccccccccceeeecccccCCccccccccCchHHHhhhhcchhheeeecccc
Confidence            77788999999999999999999999999999999999999999643   3444444443

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.8e-18  Score=111.46  Aligned_cols=123  Identities=20%  Similarity=0.154  Sum_probs=95.7

Q ss_pred             HhCCccccccCCCCCcHHHHHHHhCCHHHHHHHHHhhHhhhcC------CCCCCCccchh---------------hhhhh
Q 037410            6 ELCPSLLLNVNAKGDTPLRVAAKFGHSDIVSVLVQTAKIAQHG------DGEPESGIGAD---------------RQMIR   64 (161)
Q Consensus         6 ~~~~~~~~~~~~~g~t~lh~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~~~~~~~~---------------~~~~~   64 (161)
                      ...+++.+.+|..|.|||++|+..++.++++.+++.+......      ...+...+...               ....+
T Consensus        59 ~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~  138 (221)
T d1iknd_          59 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN  138 (221)
T ss_dssp             CSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred             ccccccccccccccccccccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccc
Confidence            3566788889999999999999999999999999876654332      11122222110               01112


Q ss_pred             -hhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHHhCCChHHHHHHHhcCCC
Q 037410           65 -MANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAAKGRYSEMVIELLETAHQ  129 (161)
Q Consensus        65 -~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~g~~  129 (161)
                       ..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++.+++++|++.+.+
T Consensus       139 ~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad-~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         139 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             cccccCCCCccccccccccHHHHHHHHhcCCc-ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCc
Confidence             2346799999999999999999999999998 899999999999999999999999999988643

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=3.1e-16  Score=107.29  Aligned_cols=49  Identities=31%  Similarity=0.512  Sum_probs=45.8

Q ss_pred             hhhhcCCCccHHHHHHhcCcHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Q 037410           63 IRMANNEKNTALHEAVCHGNVHVVKILTKQGPDNPYSANNYGKTPLYMAA  112 (161)
Q Consensus        63 ~~~~~~~g~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~~~t~l~~A~  112 (161)
                      ++.+|..|+||||+|++.|+.+++++|++.|++ ++..|..|.|||++|+
T Consensus       252 in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd-~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         252 LNAQDSNGDTCLNIAARLGNISIVDALLDYGAD-PFIANKSGLRPVDFGA  300 (301)
T ss_dssp             TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC-TTCCCTTSCCGGGGTC
T ss_pred             ccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHcC
Confidence            466789999999999999999999999999999 8999999999999985