Citrus Sinensis ID: 037429

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400--
MRTYPAATVLFLFFLTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESSSTPSATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLFN
cccccHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccEEEEEEEEEcccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEcccccccccccEEEEcccccccccccccccccEEEEccccccHHHHHHcccccccEEEEcccccccccccEEEEEccccccccccEEEEEcccccccccEEEEEEEEEEccEEEcccccEEEcccccccEEEEcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEccEEEEccccccccc
ccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccEEEEEEccccEEEEEccccHHHcccccccccccccccccccccccHHHHccccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccEEEccEEEEEccccccccccccccccEEEEcccccccHHHHccccccccEEEEEcccccccccccEEEEccccccccccEEcccccccccccEEEEEEEEEEEccEEEccccHHcccccccccEEEEccccEccccHHHHHHHHHHHHHHHHccccccccccccccccEEcccccccEccEEEEEEccccEEcccccEEEcc
MRTYPAATVLFLFFLTFSRLLHfisskptglsfrliprdspesplypgnltglERIERMIKFSDFRAAylessstpsatvdAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTgggliwtqcqpckncyrqqfpiynsvasstyrklpcdhplcqgdnnlykcvdqqcvysvgyggggttkgVASFEsfrfatdsssattvdniifgcsndnqniQFASRGVISGIlglssspdsiVMQLSDVVDKrfsyclvpftdalmapsivkfgndipplsgtvqattfvpppgsfyyhlslidisvgtrrsrsvttTLARSRtvtndlpgydsdqttvgRNAYRAVMGAFQNYYDALKlerigrvpeglqlcytnppgfnnfasftyhfdgasydiEGKFVNLFN
MRTYPAATVLFLFFLTFSRLLHFISSKPTGLSFrliprdspesplypgnltgLERIERMIKFSDFRAAYLessstpsatvdAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDisvgtrrsrsvtttlarsrtvtndlpgydsdqttvgRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLFN
MRTYPAATVlflffltfsrllhfISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESSSTPSATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVgyggggttkgVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVisgilglsssPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDIsvgtrrsrsvtttlarsrtvtNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLFN
****PAATVLFLFFLTFSRLLHFISSKPTGLSFRLI********LYPGNLTGLERIERMIKFSDFRAAYLE******ATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNL**
****PAATVLFLFFLTFSRLLHFIS*****LSFRLIPRD************************************************TLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQF************KLPCDHPLC************QCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPF**********KFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYY***********PEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLF*
MRTYPAATVLFLFFLTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESSSTPSATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLFN
MRTYPAATVLFLFFLTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESSST**********VFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLFN
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRTYPAATVLFLFFLTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESSSTPSATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLFN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query402 2.2.26 [Sep-21-2011]
Q6XBF8437 Aspartic proteinase CDR1 yes no 0.880 0.810 0.312 1e-37
Q766C2438 Aspartic proteinase nepen N/A no 0.840 0.771 0.317 2e-33
Q766C3437 Aspartic proteinase nepen N/A no 0.855 0.787 0.303 4e-32
Q3EBM5447 Probable aspartic proteas no no 0.713 0.642 0.308 3e-30
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.644 0.551 0.308 1e-22
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.368 0.296 0.318 1e-19
Q9S9K4475 Aspartic proteinase-like no no 0.495 0.418 0.251 2e-11
Q9LX20 528 Aspartic proteinase-like no no 0.589 0.448 0.241 1e-07
P69477178 Aspartic proteinase nepen N/A no 0.201 0.455 0.349 2e-07
Q9LZL3453 Aspartic proteinase PCS1 no no 0.345 0.306 0.261 3e-07
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 172/375 (45%), Gaps = 21/375 (5%)

Query: 25  SSKPT-GLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRA-AYLESSSTPSATVDA 82
           ++KP  G +  LI RDSP+SP Y    T  +R+   I  S  R   + E  +TP   +D 
Sbjct: 24  NAKPKLGFTADLIHRDSPKSPFYNPMETSSQRLRNAIHRSVNRVFHFTEKDNTPQPQID- 82

Query: 83  ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVA 142
                 L      Y++ V IG+PP  +  + DTG  L+WTQC PC +CY Q  P+++   
Sbjct: 83  ------LTSNSGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKT 136

Query: 143 SSTYRKLPCDHPLCQGDNNLYKCV--DQQCVYSVGYGGGGTTKGVASFESFRFATDSSSA 200
           SSTY+ + C    C    N   C   D  C YS+ YG    TKG  + ++    +  +  
Sbjct: 137 SSTYKDVSCSSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRP 196

Query: 201 TTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDA 260
             + NII GC ++N    F  +G     +GL   P S++ QL D +D +FSYCLVP T  
Sbjct: 197 MQLKNIIIGCGHNNAGT-FNKKGSGI--VGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSK 253

Query: 261 LMAPSIVKFG-NDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSR 319
               S + FG N I   SG V            +Y+L+L  ISVG+++ +   +      
Sbjct: 254 KDQTSKINFGTNAIVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQ--YSGSDSES 311

Query: 320 TVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNF 379
           +  N +    +  T +    Y  +  A  +  DA   E+      GL LCY+   G    
Sbjct: 312 SEGNIIIDSGTTLTLLPTEFYSELEDAVASSIDA---EKKQDPQSGLSLCYS-ATGDLKV 367

Query: 380 ASFTYHFDGASYDIE 394
              T HFDGA   ++
Sbjct: 368 PVITMHFDGADVKLD 382
Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|P69477|NEP2_NEPDI Aspartic proteinase nepenthesin-2 (Fragments) OS=Nepenthes distillatoria PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query402
255563741448 Aspartic proteinase nepenthesin-2 precur 0.937 0.841 0.388 4e-62
255563739414 DNA binding protein, putative [Ricinus c 0.823 0.799 0.325 9e-44
358346443434 Aspartic proteinase nepenthesin-1 [Medic 0.917 0.850 0.307 3e-39
449454654434 PREDICTED: probable aspartic protease At 0.708 0.656 0.306 5e-37
357487631431 Aspartic proteinase nepenthesin-1 [Medic 0.907 0.846 0.303 6e-37
357492389434 Aspartic proteinase nepenthesin-1 [Medic 0.920 0.852 0.302 7e-37
357492401434 Aspartic proteinase nepenthesin-1 [Medic 0.920 0.852 0.302 5e-36
15242803437 aspartyl protease family protein [Arabid 0.880 0.810 0.312 8e-36
116790042460 unknown [Picea sitchensis] 0.858 0.75 0.324 8e-36
116831531438 unknown [Arabidopsis thaliana] 0.880 0.808 0.312 9e-36
>gi|255563741|ref|XP_002522872.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223537956|gb|EEF39570.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/394 (38%), Positives = 219/394 (55%), Gaps = 17/394 (4%)

Query: 14  FLTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESS 73
           +LT   L+HF  SKP G S  ++ R S ESP YPGN+T  ERI R+++ S  RA  L  +
Sbjct: 11  YLTILSLIHFAISKPDGFSLEIVHRYSRESPFYPGNITDYERITRLVELSKIRAHNLAIT 70

Query: 74  STPSATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQ 133
           ++   + +A R+  +  ++   Y+V+V IGSP + ++L+ DTG GL WTQC+PC   +RQ
Sbjct: 71  TSSGFSPEAFRLRIS--QDDTCYLVKVIIGSPGVPLYLVPDTGSGLFWTQCEPCTRRFRQ 128

Query: 134 QFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRF 193
             PI+NS AS TYR LPC H  C  + N+++C D +CVY + Y GG  T GVA       
Sbjct: 129 LPPIFNSTASRTYRDLPCQHQFCTNNQNVFQCRDDKCVYRIAYAGGSATAGVA------- 181

Query: 194 ATDSSSATTVDNI--IFGCSNDNQNIQ-FASRGVISGILGLSSSPDSIVMQLSDVVDKRF 250
           A D   +   D I   FGCS DNQN   F S G   GI+GL+ SP S++ Q++ +   RF
Sbjct: 182 AQDILQSAENDRIPFYFGCSRDNQNFSTFESSGKGGGIIGLNMSPVSLLQQMNHITKNRF 241

Query: 251 SYCLVPF--TDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRS 308
           SYCL  F  +    A S+++FGNDI        +T FV P G   Y L+LID+SV   R 
Sbjct: 242 SYCLNLFDLSSPSHATSLLRFGNDIRKSRRKYLSTPFVSPRGMPNYFLNLIDVSVAGNRM 301

Query: 309 RSVTTTLA-RSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQ 367
           +    T A +       +    +  T + + AY  V+ AF+NY+D    +R+     G  
Sbjct: 302 QIPPGTFALKPDGTGGTIIDSGTAVTYISQTAYFPVITAFKNYFDQHGFQRVNIQLSGY- 360

Query: 368 LCYTNP-PGFNNFASFTYHFDGASYDIEGKFVNL 400
           +CY      F+N+ S  +HF GA + +E ++V L
Sbjct: 361 ICYKQQGHTFHNYPSMAFHFQGADFFVEPEYVYL 394

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255563739|ref|XP_002522871.1| DNA binding protein, putative [Ricinus communis] gi|223537955|gb|EEF39569.1| DNA binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|358346443|ref|XP_003637277.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355503212|gb|AES84415.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449454654|ref|XP_004145069.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449470632|ref|XP_004153020.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] gi|449499016|ref|XP_004160697.1| PREDICTED: probable aspartic protease At2g35615-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357487631|ref|XP_003614103.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355515438|gb|AES97061.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357492389|ref|XP_003616483.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355517818|gb|AES99441.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357492401|ref|XP_003616489.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] gi|355517824|gb|AES99447.1| Aspartic proteinase nepenthesin-1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|15242803|ref|NP_198319.1| aspartyl protease family protein [Arabidopsis thaliana] gi|75130158|sp|Q6XBF8.1|CDR1_ARATH RecName: Full=Aspartic proteinase CDR1; AltName: Full=Protein CONSTITUTIVE DISEASE RESISTANCE 1; Flags: Precursor gi|37935737|gb|AAP72988.1| CDR1 [Arabidopsis thaliana] gi|91806924|gb|ABE66189.1| aspartyl protease family protein [Arabidopsis thaliana] gi|109946613|gb|ABG48485.1| At5g33340 [Arabidopsis thaliana] gi|332006513|gb|AED93896.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116790042|gb|ABK25480.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|116831531|gb|ABK28718.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query402
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.878 0.807 0.287 2.2e-34
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.878 0.819 0.276 2.3e-32
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.651 0.588 0.298 8.2e-28
TAIR|locus:504955954447 AT2G35615 [Arabidopsis thalian 0.644 0.579 0.299 5.7e-26
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.803 0.668 0.261 4.9e-23
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.475 0.411 0.309 2.5e-21
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.880 0.767 0.260 4e-20
TAIR|locus:505006268458 AT2G23945 [Arabidopsis thalian 0.654 0.574 0.261 6.8e-20
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.462 0.395 0.305 1.1e-19
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.656 0.544 0.266 3.7e-19
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 108/376 (28%), Positives = 157/376 (41%)

Query:    25 SSKPT-GLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYL-ESSSTPSATVDA 82
             ++KP  G +  LI RDSP+SP Y    T  +R+   I  S  R  +  E  +TP   +D 
Sbjct:    24 NAKPKLGFTADLIHRDSPKSPFYNPMETSSQRLRNAIHRSVNRVFHFTEKDNTPQPQID- 82

Query:    83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVA 142
                   L      Y++ V IG+PP  +  + DTG  L+WTQC PC +CY Q  P+++   
Sbjct:    83 ------LTSNSGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCDDCYTQVDPLFDPKT 136

Query:   143 SSTYRKLPCDHPLCQGDNNLYKCV--DQQCVYSVXXXXXXXXXXVASFESFRFATDSSSA 200
             SSTY+ + C    C    N   C   D  C YS+            + ++    +  +  
Sbjct:   137 SSTYKDVSCSSSQCTALENQASCSTNDNTCSYSLSYGDNSYTKGNIAVDTLTLGSSDTRP 196

Query:   201 TTVDNIIFGCSNDNQNIQFASRGVXXXXXXXXXXPDSIVMQLSDVVDKRFSYCLVPFTDA 260
               + NII GC ++N    F  +G           P S++ QL D +D +FSYCLVP T  
Sbjct:   197 MQLKNIIIGCGHNNAGT-FNKKG--SGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSK 253

Query:   261 LMAPSIVKFG-NDIPPLSGTVQATTFVPPPGSFYYHLSLIDIXXXXXXXXXXXXXXXXXX 319
                 S + FG N I   SG V            +Y+L+L  I                  
Sbjct:   254 KDQTSKINFGTNAIVSGSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSESSE 313

Query:   320 XXXNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPE-GLQLCYTNPPGFNN 378
                N +    +  T +    Y  +  A  +  DA K +     P+ GL LCY+   G   
Sbjct:   314 G--NIIIDSGTTLTLLPTEFYSELEDAVASSIDAEKKQD----PQSGLSLCYS-ATGDLK 366

Query:   379 FASFTYHFDGASYDIE 394
                 T HFDGA   ++
Sbjct:   367 VPVITMHFDGADVKLD 382
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA;ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=IMP;IDA
GO:0010337 "regulation of salicylic acid metabolic process" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955954 AT2G35615 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006268 AT2G23945 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6XBF8CDR1_ARATH3, ., 4, ., 2, 3, ., -0.3120.88050.8100yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CDR1
CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase; Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. (437 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
DIR1
DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1); lipid binding / lipid transporter; encodes a putative [...] (102 aa)
      • 0.599
ATMRP10
ATMRP10; ATPase, coupled to transmembrane movement of substances; member of MRP subfamily ; Pum [...] (1539 aa)
      • 0.467
AT1G33440
proton-dependent oligopeptide transport (POT) family protein; proton-dependent oligopeptide tra [...] (601 aa)
      • 0.467
AT4G35670
glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; glycoside [...] (394 aa)
      • 0.465
AT5G62730
proton-dependent oligopeptide transport (POT) family protein; proton-dependent oligopeptide tra [...] (589 aa)
      • 0.436
AT2G02050
NADH-ubiquinone oxidoreductase B18 subunit, putative; NADH-ubiquinone oxidoreductase B18 subuni [...] (103 aa)
      • 0.408
AT1G23130
Bet v I allergen family protein; Bet v I allergen family protein; FUNCTIONS IN- molecular_funct [...] (160 aa)
      • 0.408
AT5G12940
leucine-rich repeat family protein; leucine-rich repeat family protein; FUNCTIONS IN- protein b [...] (371 aa)
      • 0.407
AT4G26520
fructose-bisphosphate aldolase, cytoplasmic; fructose-bisphosphate aldolase, cytoplasmic; FUNCT [...] (358 aa)
      • 0.407
AT1G76450
oxygen-evolving complex-related; oxygen-evolving complex-related; LOCATED IN- thylakoid, thylak [...] (247 aa)
      • 0.407

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query402
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-57
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 9e-35
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 3e-28
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-22
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 9e-13
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 3e-12
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 1e-10
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-05
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 5e-05
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 0.004
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  194 bits (494), Expect = 1e-57
 Identities = 121/397 (30%), Positives = 191/397 (48%), Gaps = 19/397 (4%)

Query: 7   ATVLFLFFLTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFR 66
           + +L L   +FS L     +   G +  LI RDSP+SP Y  + T  +R+    + S  R
Sbjct: 2   SVLLALCLFSFSELSA-AEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISR 60

Query: 67  AAYLESSSTPSATVDAERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQP 126
             +   +        ++     L+  G  Y++ + IG+PP+ +  + DTG  LIWTQC+P
Sbjct: 61  VNHFRPTDASPNDPQSD-----LISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKP 115

Query: 127 CKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ-CVYSVGYGGGGTTKGV 185
           C +CY+Q  P+++   SSTY+ + CD   CQ   N   C D+  C YS  YG G  TKG 
Sbjct: 116 CDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSYSYGDGSFTKGN 175

Query: 186 ASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDV 245
            + E+    + S    +   I+FGC ++N    F  +G  SGI+GL   P S++ QL   
Sbjct: 176 LAVETLTIGSTSGRPVSFPGIVFGCGHNNGGT-FDEKG--SGIVGLGGGPLSLISQLGSS 232

Query: 246 VDKRFSYCLVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGT 305
           +  +FSYCLVP +      S + FG +       V +T  V      +Y+L+L  ISVG+
Sbjct: 233 IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGS 292

Query: 306 RRSRSVTTTLARSRTVTNDLPGYDSDQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEG 365
           ++    T +        N +    +  T +  + Y  +  A +    A+  ER+   P+G
Sbjct: 293 KKL-PYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEE---AIGGERV-SDPQG 347

Query: 366 -LQLCYTNPPGFNNFASFTYHFDGASYDIEGKFVNLF 401
            L LCY++          T HF GA  D++ + +N F
Sbjct: 348 LLSLCYSSTSDI-KLPIITAHFTGA--DVKLQPLNTF 381

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 402
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.93
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.61
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.08
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.52
PF1365090 Asp_protease_2: Aspartyl protease 95.93
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.84
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 89.82
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 82.39
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 81.8
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-67  Score=528.72  Aligned_cols=371  Identities=30%  Similarity=0.535  Sum_probs=305.1

Q ss_pred             HHHHhhhhccccCCCceEEEEecCCCCCCCCCCCCCCchHHHHHHHhccHHHHHhhhhcCCCCCcccceeeeeeeccCCe
Q 037429           15 LTFSRLLHFISSKPTGLSFRLIPRDSPESPLYPGNLTGLERIERMIKFSDFRAAYLESSSTPSATVDAERIVFTLLREGF   94 (402)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~p~~~~~~~~~   94 (402)
                      |+.+++++...+...+++++|+||++||+|+++++.++.++++++++|+.+|++++.++....  .....++   ..+++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~~~~~~~---~~~~~   83 (431)
T PLN03146          9 LFSFSELSAAEAPKGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDASP--NDPQSDL---ISNGG   83 (431)
T ss_pred             HHHHhhhhhccccCCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccccC--CccccCc---ccCCc
Confidence            333445555556778999999999999999988888889999999999999999986543211  1233444   56788


Q ss_pred             EEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC-CceE
Q 037429           95 YYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ-CVYS  173 (402)
Q Consensus        95 ~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~-~~~~  173 (402)
                      +|+++|.||||||++.|+|||||+++||+|.+|..|..+.++.|||++|+||+.++|+++.|..+.+...|..++ |.|.
T Consensus        84 ~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~  163 (431)
T PLN03146         84 EYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYS  163 (431)
T ss_pred             cEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeE
Confidence            999999999999999999999999999999999999999999999999999999999999998877644586655 9999


Q ss_pred             EeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCcccccCCccceeeecCCCCChhhhhhhhhccCceEEe
Q 037429          174 VGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYC  253 (402)
Q Consensus       174 ~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~~~~~FS~~  253 (402)
                      +.|+||+.+.|.+++|+|+|++..+....++++.|||++.+.+   .|....+||||||++++|+++||...+.++||||
T Consensus       164 i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g---~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSyc  240 (431)
T PLN03146        164 YSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGG---TFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYC  240 (431)
T ss_pred             EEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCC---CccCCCceeEecCCCCccHHHHhhHhhCCcEEEE
Confidence            9999999888999999999988654445789999999998887   5644689999999999999999987777799999


Q ss_pred             eccCCCCCCCCceEEECCCCCCCCCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccccccCCCCeeeeecC--C
Q 037429          254 LVPFTDALMAPSIVKFGNDIPPLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDS--D  331 (402)
Q Consensus       254 l~~~~~~~~~~G~l~fG~~~~~~~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t  331 (402)
                      |.+..++....|.|+||+.......++.||||+.+..+.+|+|+|++|+||++++.++...|. ..+.+++|  |||  +
T Consensus       241 L~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~-~~~~g~~i--iDSGTt  317 (431)
T PLN03146        241 LVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKN-GVEEGNII--IDSGTT  317 (431)
T ss_pred             CCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccc-cCCCCcEE--EeCCcc
Confidence            986433334589999998533223458999998654457999999999999999988766653 23456899  999  9


Q ss_pred             cccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEccc-cccc
Q 037429          332 QTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGK-FVNL  400 (402)
Q Consensus       332 ~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~~~-yi~~  400 (402)
                      +++||+++|++|+++|.+++..   .+.......++.||+.... ..+|+|+|||+|+++.||++ |+..
T Consensus       318 ~t~Lp~~~y~~l~~~~~~~~~~---~~~~~~~~~~~~C~~~~~~-~~~P~i~~~F~Ga~~~l~~~~~~~~  383 (431)
T PLN03146        318 LTLLPSDFYSELESAVEEAIGG---ERVSDPQGLLSLCYSSTSD-IKLPIITAHFTGADVKLQPLNTFVK  383 (431)
T ss_pred             ceecCHHHHHHHHHHHHHHhcc---ccCCCCCCCCCccccCCCC-CCCCeEEEEECCCeeecCcceeEEE
Confidence            9999999999999999998862   2222333346789986433 57999999999999999999 6653

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query402
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-41
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-37
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 5e-32
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-08
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-08
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 5e-08
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 1e-07
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 4e-07
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 4e-07
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 5e-07
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 1e-06
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-06
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 2e-06
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 2e-06
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 3e-06
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 4e-06
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-06
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-05
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 2e-05
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 2e-05
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-05
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 3e-05
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 4e-05
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 5e-05
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 6e-05
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 6e-05
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 7e-05
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 9e-05
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 1e-04
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 4e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  149 bits (377), Expect = 2e-41
 Identities = 48/312 (15%), Positives = 94/312 (30%), Gaps = 27/312 (8%)

Query: 95  YYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHP 154
            +   +   +P + V +L+D  G  +W  C+   +    Q P  +S   S      C   
Sbjct: 22  LHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSC 81

Query: 155 LCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSAT------TVDNIIF 208
                   +K      + S       T  G    +         S        TV   +F
Sbjct: 82  PAASRPGCHKN--TCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLF 139

Query: 209 GCSNDNQNIQFASRGVISGILGLSSSPDSIVMQLSD--VVDKRFSYCLVPFTDALMAPSI 266
            C+      +   R    G+ GL  +P S+  QL+    + ++F+ CL  +     +   
Sbjct: 140 SCAPSFLVQKGLPRNT-QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPT---SKGA 195

Query: 267 VKFGNDIPPLSGTVQAT-------TFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSR 319
           + FG+    +              T +       Y++ +  I +       +    +   
Sbjct: 196 IIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIV 255

Query: 320 TVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFN 377
             T+      +      + ++ Y+A    F      L  +   +      LC+ N    N
Sbjct: 256 GSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQ---QLPKQAQVKSVAPFGLCF-NSNKIN 311

Query: 378 NFASFTYHFDGA 389
            + S     D  
Sbjct: 312 AYPSVDLVMDKP 323
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query402
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.91
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.89
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 95.23
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=5.9e-52  Score=413.74  Aligned_cols=297  Identities=20%  Similarity=0.328  Sum_probs=241.8

Q ss_pred             ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429           82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN  161 (402)
Q Consensus        82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~  161 (402)
                      ...|++. ...+++|+++|.||||||+|.|+|||||+++||+|.+|             .+|+||+.++|.++.|.....
T Consensus         9 ~~~pv~~-d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~   74 (413)
T 3vla_A            9 LVVPVKK-DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGS   74 (413)
T ss_dssp             EEEEEEE-CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTC
T ss_pred             EEEEeee-cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccccccc
Confidence            5667753 35789999999999999999999999999999999875             379999999999999986543


Q ss_pred             C----------CCCCCCCCceEEee-CCCCeEeEEEEEEEEEEecCCCC----ceeeccEEEEeeeCCCCcccccCCccc
Q 037429          162 L----------YKCVDQQCVYSVGY-GGGGTTKGVASFESFRFATDSSS----ATTVDNIIFGCSNDNQNIQFASRGVIS  226 (402)
Q Consensus       162 ~----------~~C~~~~~~~~~~Y-~dGs~~~G~~~~D~v~~~~~~~~----~~~~~~~~fG~~~~~~~~~~~~~~~~~  226 (402)
                      .          ..|..+.|.|.+.| +||+.+.|++++|+|+|+..+|.    .+.++++.|||++.+.+.. .+ ...|
T Consensus        75 ~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~-~~~d  152 (413)
T 3vla_A           75 IACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LA-SGVV  152 (413)
T ss_dssp             CEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SC-TTCC
T ss_pred             CCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cc-cccc
Confidence            1          23544449999999 58888889999999999865443    3578999999999863210 23 5689


Q ss_pred             eeeecCCCCChhhhhhhhh--ccCceEEeeccCCCCCCCCceEEECCCCCC------CCCC-eeeeeecCCCC-------
Q 037429          227 GILGLSSSPDSIVMQLSDV--VDKRFSYCLVPFTDALMAPSIVKFGNDIPP------LSGT-VQATTFVPPPG-------  290 (402)
Q Consensus       227 GIlGLg~~~~s~~~ql~~~--~~~~FS~~l~~~~~~~~~~G~l~fG~~~~~------~~~~-~~~tp~~~~~~-------  290 (402)
                      ||||||++++|+++||..+  +.++|||||++.   ...+|.|+||+.+..      +.+. +.||||+.++.       
T Consensus       153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~---~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~  229 (413)
T 3vla_A          153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS---TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST  229 (413)
T ss_dssp             EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC---SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred             cccccCCCCcchHHHHhhhcCCCceEEEeCCCC---CCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence            9999999999999999987  569999999984   256899999998753      2456 99999998742       


Q ss_pred             ----CceeEEEEEEEEECCEEeeecccccc-cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCC
Q 037429          291 ----SFYYHLSLIDISVGTRRSRSVTTTLA-RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVP  363 (402)
Q Consensus       291 ----~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~  363 (402)
                          ..||+|+|++|+||++.+.++...|+ +.++++++|  |||  ++++||+++|++|+++|.+++..++++++. ..
T Consensus       230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aI--iDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~-~~  306 (413)
T 3vla_A          230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTK--ISTINPYTVLETSIYKAVTEAFIKESAARNITRVA-SV  306 (413)
T ss_dssp             TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEE--ECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEEC-CC
T ss_pred             ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEE--EECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCC-CC
Confidence                26999999999999999998877776 444678899  999  999999999999999999987633355543 23


Q ss_pred             CCCCccccCCCCC-----ccccEEEEEEcC--cEEEEccc-cccc
Q 037429          364 EGLQLCYTNPPGF-----NNFASFTYHFDG--ASYDIEGK-FVNL  400 (402)
Q Consensus       364 ~~~~~C~~~~~~~-----~~~P~i~f~f~G--~~~~l~~~-yi~~  400 (402)
                      ..++.||..++..     ..+|+|+|+|+|  ++|+||++ ||..
T Consensus       307 ~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~  351 (413)
T 3vla_A          307 APFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVY  351 (413)
T ss_dssp             TTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEE
T ss_pred             CCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEE
Confidence            3467899987542     379999999997  89999999 8764
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 402
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 4e-23
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-17
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 6e-17
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-16
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 1e-16
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 3e-16
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-15
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-15
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-15
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-14
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 3e-14
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 4e-14
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 5e-14
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 6e-14
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 7e-14
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 8e-14
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-13
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-12
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 5e-12
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-11
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 3e-11
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 4e-09
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 97.8 bits (242), Expect = 4e-23
 Identities = 54/304 (17%), Positives = 92/304 (30%), Gaps = 24/304 (7%)

Query: 96  YIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPL 155
           Y +    G+      L++D  G L+W+ C   +            + ++ Y    C  P 
Sbjct: 16  YTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPS 70

Query: 156 CQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFA-TDSSSATTVDNIIFGCSNDN 214
           C  D +   C      Y      G    G  S   F    TD S   +  N+    +   
Sbjct: 71  CGSDKHDKPC----TAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAP 126

Query: 215 QNIQFASRGVISGILGLSSSPDSIVMQLSDVVDKRFSYCLVPFTDALMAPSIVKFGNDIP 274
             +  +     +G+ GL++S  ++  Q++        + L   T               P
Sbjct: 127 SKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWP 186

Query: 275 PLSGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDSDQTT 334
             + ++  T  V   GS  +++S   I VG  R       LA    + +           
Sbjct: 187 QFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLST----RLPYVL 242

Query: 335 VGRNAYRAVMGAFQNYYDALKLERIGRVP-----EGLQLCYTNPPGFNNFA-----SFTY 384
           +  + YR +M AF     A                   +CY      NN       +   
Sbjct: 243 LRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQL 302

Query: 385 HFDG 388
             DG
Sbjct: 303 GLDG 306
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query402
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.6e-45  Score=360.66  Aligned_cols=260  Identities=20%  Similarity=0.287  Sum_probs=212.5

Q ss_pred             eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCC
Q 037429           83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNL  162 (402)
Q Consensus        83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~  162 (402)
                      ..||.  ++.+.+|+++|.||||||+|.|+|||||+++||+|..|..|.++.++.|||++|+||+...            
T Consensus        47 ~~~l~--n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~------------  112 (370)
T d3psga_          47 DEPLE--NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------  112 (370)
T ss_dssp             CCTTG--GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------
T ss_pred             ccccc--cccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCC------------
Confidence            45665  6678999999999999999999999999999999999999999999999999999998842            


Q ss_pred             CCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCCh---
Q 037429          163 YKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS---  237 (402)
Q Consensus       163 ~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s---  237 (402)
                             |.|.+.|++|+.. |.++.|++.+++.     .++++.|||++...+   .+  ....+||+|||++..+   
T Consensus       113 -------~~~~~~Yg~Gs~~-G~~~~d~~~~~~~-----~~~~~~f~~~~~~~~---~~~~~~~~~Gi~gl~~~~~~~~~  176 (370)
T d3psga_         113 -------QELSITYGTGSMT-GILGYDTVQVGGI-----SDTNQIFGLSETEPG---SFLYYAPFDGILGLAYPSISASG  176 (370)
T ss_dssp             -------EEEEEESSSCEEE-EEEEEEEEEETTE-----EEEEEEEEEECSCCC---GGGGGCSCSEEEECSCGGGCGGG
T ss_pred             -------CcEEEEeCCceEE-EEEEEEEEeeece-----eeeeeEEEEEeeccC---ceecccccccccccccCcccccC
Confidence                   8999999999865 9999999999987     899999999998876   33  3568999999987543   


Q ss_pred             ---hhhhhhhh---ccCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeee
Q 037429          238 ---IVMQLSDV---VDKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRS  310 (402)
Q Consensus       238 ---~~~ql~~~---~~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~  310 (402)
                         +..++..+   ..++||+|+.+.   ...+|.|+||+.|+.+ .+.+.|+|+...   .+|.|.+++|.++++.+..
T Consensus       177 ~~~~~~~l~~~~~i~~~~fs~~l~~~---~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~---~~w~v~~~~i~v~g~~~~~  250 (370)
T d3psga_         177 ATPVFDNLWDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSYYTGSLNWVPVSVE---GYWQITLDSITMDGETIAC  250 (370)
T ss_dssp             CCCHHHHHHHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECSEE---TTEEEEECEEESSSSEEEC
T ss_pred             CCchhhhhhhhcccccceeEEEeecC---CCCCceEecCCcCchhcccceeEEeeccc---ceEEEEEeeEEeCCeEEec
Confidence               45666665   358999999875   2557999999998876 467999998653   4899999999999987754


Q ss_pred             cccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcC
Q 037429          311 VTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDG  388 (402)
Q Consensus       311 ~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G  388 (402)
                      .        ++..+|  |||  ++++||+++|++|.++|.+....        .......|+..    ..+|+|+|+|+|
T Consensus       251 ~--------~~~~ai--iDSGTs~~~lp~~~~~~i~~~l~~~~~~--------~~~~~~~C~~~----~~~P~l~f~f~g  308 (370)
T d3psga_         251 S--------GGCQAI--VDTGTSLLTGPTSAIANIQSDIGASENS--------DGEMVISCSSI----DSLPDIVFTIDG  308 (370)
T ss_dssp             T--------TCEEEE--ECTTCCSEEEEHHHHHHHHHHTTCEECT--------TCCEECCGGGG----GGCCCEEEEETT
T ss_pred             C--------CCccEE--EecCCceEeCCHHHHHHHHHHhCCeeec--------CCcEEEecccc----CCCceEEEEECC
Confidence            2        234688  999  99999999999998887543321        11112345544    578999999999


Q ss_pred             cEEEEccc-cccc
Q 037429          389 ASYDIEGK-FVNL  400 (402)
Q Consensus       389 ~~~~l~~~-yi~~  400 (402)
                      ++|.|+++ ||..
T Consensus       309 ~~~~l~~~~yi~~  321 (370)
T d3psga_         309 VQYPLSPSAYILQ  321 (370)
T ss_dssp             EEEEECHHHHEEE
T ss_pred             EEEEEChHHeEEE
Confidence            99999999 8764
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure