Citrus Sinensis ID: 037469
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 429 | ||||||
| 224118736 | 383 | predicted protein [Populus trichocarpa] | 0.871 | 0.976 | 0.620 | 1e-139 | |
| 225456057 | 462 | PREDICTED: uncharacterized glycosyltrans | 0.990 | 0.919 | 0.534 | 1e-139 | |
| 224135457 | 378 | predicted protein [Populus trichocarpa] | 0.848 | 0.962 | 0.608 | 1e-135 | |
| 356511269 | 462 | PREDICTED: uncharacterized glycosyltrans | 0.990 | 0.919 | 0.507 | 1e-134 | |
| 357521533 | 420 | Glycosyltransferase, putative [Medicago | 0.883 | 0.902 | 0.572 | 1e-133 | |
| 357521531 | 530 | Glycosyltransferase, putative [Medicago | 0.883 | 0.715 | 0.572 | 1e-132 | |
| 357521535 | 568 | Glycosyltransferase, putative [Medicago | 0.883 | 0.667 | 0.572 | 1e-132 | |
| 357521529 | 566 | Glycosyltransferase, putative [Medicago | 0.883 | 0.669 | 0.572 | 1e-132 | |
| 356527872 | 462 | PREDICTED: uncharacterized glycosyltrans | 0.990 | 0.919 | 0.498 | 1e-131 | |
| 297734272 | 446 | unnamed protein product [Vitis vinifera] | 0.944 | 0.908 | 0.506 | 1e-128 |
| >gi|224118736|ref|XP_002317893.1| predicted protein [Populus trichocarpa] gi|222858566|gb|EEE96113.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/385 (62%), Positives = 298/385 (77%), Gaps = 11/385 (2%)
Query: 54 IEPAAVCSVTKGSDFCEINNDIRIDGSSATVFIASS-----LADQTEWIIRPYARKYDHV 108
+EP +C++ SDFCEI DIRIDGSS TVFI SS A+ T W IRPYARK D
Sbjct: 1 MEP--LCTIMGRSDFCEIKGDIRIDGSSYTVFIVSSETDILAAENTSWRIRPYARKGDQT 58
Query: 109 AMKRVNEWSVK---SAASLLQCNQNHSVPAILFSNGGYAGNIFHDFSDIIIPLYINSRQF 165
AM V EW++K + + QC QNHSVP ILFS GGYAGN FH F+DII+PL+ +R +
Sbjct: 59 AMGAVREWTLKLVAGGSDIPQCTQNHSVPGILFSAGGYAGNHFHAFTDIIVPLFSTARPY 118
Query: 166 NGQVQFVITNKQSWWINKYQNILKKLSRYDIIDIDNQDDIHCFPRGIIGLKRHD-RELNI 224
NG+VQF+ITN S WI K++ ILK LSRY++I+IDN+ DIHCF +GLKR +EL+I
Sbjct: 119 NGEVQFIITNGWSAWIAKFKTILKALSRYELINIDNRKDIHCFGSMTVGLKRPSYKELSI 178
Query: 225 NSSESPYSIKDFRQFIRSSYSLQKPAAIRLRDGEKKKPRLLIVSRKRTRAFTNAEEIAQM 284
+ S+SPYSIKDFRQF+RSSYSL+K AI++RDG KK+PRLLI+SRKR+RAFTN EI M
Sbjct: 179 DPSKSPYSIKDFRQFLRSSYSLKKTRAIKIRDGMKKRPRLLIISRKRSRAFTNVGEIVNM 238
Query: 285 GRRLGFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMTNMIFLPENAVFIQVVPFGGFA 344
RLGF VVVAE ++S F++ +N CDV + VHGA +TN++FLPE AV IQV+PFGG
Sbjct: 239 AERLGFRVVVAEPGMDVSGFSQIINSCDVVMGVHGAGLTNIVFLPEKAVLIQVIPFGGAE 298
Query: 345 WLARTDYEEPAKAMKLRYLEYKIKLDESTLIQQYPLDHQVIRDPSSIGKQGWNAFRSVYM 404
WL+RT +EEPAK M +RYL+YKI+++ESTLIQQYP DH V+RDPS IGKQGW AF+S+Y+
Sbjct: 299 WLSRTFFEEPAKDMNIRYLDYKIRVEESTLIQQYPADHAVLRDPSVIGKQGWLAFQSIYL 358
Query: 405 VQQNVKVDLNRFRSTLLKALELLHQ 429
+QNV +D+NRFR TL+KALELLHQ
Sbjct: 359 QKQNVTIDVNRFRPTLVKALELLHQ 383
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456057|ref|XP_002277670.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224135457|ref|XP_002322078.1| predicted protein [Populus trichocarpa] gi|222869074|gb|EEF06205.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356511269|ref|XP_003524349.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357521533|ref|XP_003631055.1| Glycosyltransferase, putative [Medicago truncatula] gi|355525077|gb|AET05531.1| Glycosyltransferase, putative [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357521531|ref|XP_003631054.1| Glycosyltransferase, putative [Medicago truncatula] gi|355525076|gb|AET05530.1| Glycosyltransferase, putative [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357521535|ref|XP_003631056.1| Glycosyltransferase, putative [Medicago truncatula] gi|355525078|gb|AET05532.1| Glycosyltransferase, putative [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357521529|ref|XP_003631053.1| Glycosyltransferase, putative [Medicago truncatula] gi|355525075|gb|AET05529.1| Glycosyltransferase, putative [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356527872|ref|XP_003532530.1| PREDICTED: uncharacterized glycosyltransferase AGO61-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297734272|emb|CBI15519.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 429 | ||||||
| TAIR|locus:2092762 | 470 | AT3G18180 [Arabidopsis thalian | 0.864 | 0.789 | 0.539 | 4.2e-117 | |
| TAIR|locus:2092757 | 384 | AT3G18170 [Arabidopsis thalian | 0.857 | 0.958 | 0.531 | 1.1e-108 | |
| TAIR|locus:2062709 | 500 | AT2G41640 [Arabidopsis thalian | 0.881 | 0.756 | 0.368 | 4.1e-65 | |
| TAIR|locus:2082598 | 504 | AT3G57380 [Arabidopsis thalian | 0.892 | 0.759 | 0.376 | 4.1e-65 | |
| TAIR|locus:2076274 | 494 | AT3G10320 [Arabidopsis thalian | 0.864 | 0.751 | 0.351 | 2e-63 | |
| TAIR|locus:2063793 | 452 | AT2G03370 [Arabidopsis thalian | 0.813 | 0.772 | 0.342 | 1.3e-52 | |
| TAIR|locus:2063809 | 455 | AT2G03360 [Arabidopsis thalian | 0.813 | 0.767 | 0.335 | 3.2e-49 | |
| WB|WBGene00010386 | 523 | H12D21.10 [Caenorhabditis eleg | 0.487 | 0.399 | 0.253 | 0.00011 | |
| UNIPROTKB|Q5NDF2 | 580 | GTDC2 "Glycosyltransferase-lik | 0.561 | 0.415 | 0.207 | 0.00013 | |
| UNIPROTKB|F1SRD5 | 580 | GTDC2 "Uncharacterized protein | 0.561 | 0.415 | 0.211 | 0.00013 |
| TAIR|locus:2092762 AT3G18180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1074 (383.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 207/384 (53%), Positives = 275/384 (71%)
Query: 53 KIE-PAAVCSVTKGSDFCEINNDIRIDGSSATVFIASSLA--DQTEWIIRPYARKYDHVA 109
K+E P C+ +FC+++ D+RI G SATV A + A + W +RPYARK A
Sbjct: 88 KMEKPICHCNTLGSKEFCDVSGDVRIHGKSATVLAAVTFAFSGNSTWYMRPYARKDQVPA 147
Query: 110 MKRVNEWSVKSA--ASLLQCNQNHSVPAILFSNGGYAGNIFHDFSDIIIPLYINSRQFNG 167
MKRV EW+VK ASL +C +NHSVPAILFS GG++ N FHDF+DI+IPLY +R+F+G
Sbjct: 148 MKRVREWTVKLVQNASLSRCVRNHSVPAILFSLGGFSLNNFHDFTDIVIPLYTTARRFSG 207
Query: 168 QVQFVITNKQSWWINKYQNILKKLSRYXXXXXXXXXXXHCFPRGIIGLKRH---DRELNI 224
+VQF++TNK WINK++ +++KLS Y HCF I+GL RH D+EL
Sbjct: 208 EVQFLVTNKNLLWINKFKELVRKLSNYEVIYIDEEDETHCFSSVIVGLNRHRDYDKELTT 267
Query: 225 NSSESPYSIKDFRQFIRSSYSLQKPAAIRLRDGEKKKPRLLIVSRKRTRAFTNAEEIAQM 284
+ S S YS+ DFR+F+R +YSL+ +A+ R +KPR+LI+SR R+RAF NA EIA+
Sbjct: 268 DPSNSEYSMSDFRKFLRDTYSLRN-SAVTTR----RKPRILILSRSRSRAFVNAGEIARA 322
Query: 285 GRRLGFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMTNMIFLPENAVFIQVVPFGGFA 344
R++GF VVVAEAN ++ FA TVN CDV L VHGA MTNM+FLP+NA+ IQ++P GGF
Sbjct: 323 ARQIGFKVVVAEANTEIASFAITVNSCDVMLGVHGAGMTNMVFLPDNAIVIQILPIGGFE 382
Query: 345 WLARTDYEEPAKAMKLRYLEYKIKLDESTLIQQYPLDHQVIRDPSSIGKQGWNAFRSVYM 404
WLA+ D+E P+K M LRYLEYKI +ESTL++QY DH+ +RDP ++ K+GW F+SVY+
Sbjct: 383 WLAKMDFEYPSKGMNLRYLEYKITAEESTLVKQYGRDHEFVRDPLAVAKRGWGTFKSVYL 442
Query: 405 VQQNVKVDLNRFRSTLLKALELLH 428
VQQNV VD+NRF+ L+KALELLH
Sbjct: 443 VQQNVSVDINRFKLVLVKALELLH 466
|
|
| TAIR|locus:2092757 AT3G18170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2062709 AT2G41640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2082598 AT3G57380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2076274 AT3G10320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063793 AT2G03370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063809 AT2G03360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00010386 H12D21.10 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5NDF2 GTDC2 "Glycosyltransferase-like domain-containing protein 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SRD5 GTDC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 429 | |||
| pfam04577 | 206 | pfam04577, DUF563, Protein of unknown function (DU | 8e-15 |
| >gnl|CDD|218156 pfam04577, DUF563, Protein of unknown function (DUF563) | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 8e-15
Identities = 44/215 (20%), Positives = 76/215 (35%), Gaps = 33/215 (15%)
Query: 145 GNIFHDFSDIIIPLYINSRQFNGQVQFVITNKQSWWINKYQN-ILKKLS-RYDIIDIDNQ 202
N H D + L++ + ++ S + L+ L D I +
Sbjct: 1 NNFGHWLLDFLPRLWL-LPEEILDDDIIVLIPDSGSPPPFIREFLELLGIPEDRIVLKYD 59
Query: 203 DDIHCFPRGIIGLKRHDRELNINSSESPYSIKDFRQFIRSSYSLQKPAAIRLRDGEKKKP 262
+ + + + R +R ++L K KP
Sbjct: 60 EPVRVERLIVPSPPFPAG------GYFGPLLPRLRDLLRERFNL-----------SKIKP 102
Query: 263 RLLIVSRKRT--RAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNY---CDVFLAV 317
R + +SRK+ R N +E+ + + GF +V E LS E V V +
Sbjct: 103 RKVYISRKKAGRRRILNEDELEEALPKYGFEIVDPE---TLS-LEEQVKLFSSAKVIVGP 158
Query: 318 HGAAMTNMIFLPENAVFIQVVP----FGGFAWLAR 348
HG+A+TN+IF+P +++VP F LA
Sbjct: 159 HGSALTNLIFMPPGTGVVELVPPNRLDPSFRNLAA 193
|
Family of uncharacterized proteins. Length = 206 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 429 | |||
| KOG4698 | 475 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| PF04577 | 206 | DUF563: Protein of unknown function (DUF563); Inte | 99.96 | |
| COG4421 | 368 | Capsular polysaccharide biosynthesis protein [Carb | 99.78 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 89.34 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 86.66 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.32 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.01 |
| >KOG4698 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-82 Score=642.82 Aligned_cols=424 Identities=37% Similarity=0.627 Sum_probs=384.9
Q ss_pred ChhhhhhhccchhhhhhccchhhHHHHHHHHHhhhheeeccccCCcc-ccc----------------------ccCCC-C
Q 037469 1 MYNYIFARSFKKREQKQLKFKWMALLCFSLIALSLCAMFKPYLGPLP-AAL----------------------TKKIE-P 56 (429)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------------------~~~~~-~ 56 (429)
++++|+.++.++..++.+.+ +.+.+.++.+++.|++.+|++.+.| .+. ++..+ +
T Consensus 7 ~i~~i~~~~~~~~~~~~~~~--~~f~~~~~~vl~~~~v~kp~~l~~~~~~~~~~tg~~~~~~~~~~~~~~q~~~~~~e~~ 84 (475)
T KOG4698|consen 7 LILHIFLREDKKNLLGLLIY--GVFHSSLLSVLPKCVVVKPYLLLLPRFQPDLPTGSFEDELLPLSQLLRQPPGSALEDS 84 (475)
T ss_pred hhHHHHHHhhhhcCccceec--CcchhhhhhhcccceecCCeecccCccccCcccceeeccCCChhhcccCCCCcccCCc
Confidence 46889999999999999999 9999999999999999999964432 211 11112 2
Q ss_pred Ccccc-CCCCccceEeeCcEEeeCCceEEEEecC----CCCCcceEecCcccCCcccccccceEEEEee--ccccCCCce
Q 037469 57 AAVCS-VTKGSDFCEINNDIRIDGSSATVFIASS----LADQTEWIIRPYARKYDHVAMKRVNEWSVKS--AASLLQCNQ 129 (429)
Q Consensus 57 ~~~C~-~~~~~d~C~~~gdvr~~~~~~tv~~~~~----~~~~~~~~i~py~Rk~~~~~m~~v~e~~~~~--~~~~~~C~~ 129 (429)
.+.|+ ++.++|+|+++||+|+|+.++|++.... .+.+.+|+||||+||||..+|++|+|+++.. .+...+|++
T Consensus 85 ~~~C~~~g~~s~~c~~kg~~r~h~~~~~~~~~~~~~~~~s~~~~e~ikpy~rk~~~~vmp~vre~~l~~~~~~~~r~c~v 164 (475)
T KOG4698|consen 85 SFFCDRSGTRSDFCEMKGDVRTHPDSSTVLLTLGRLLTFSGRLVEKIKPYTRKGETWVMPEVRELNLLVRPGSEIRRCDV 164 (475)
T ss_pred eEEeeccccccchhhhcCccccCcchhhhhhhccchhhhccccchhcccccccccccccccccccceEEcCCcccceeee
Confidence 47788 6778999999999999999999987766 5678899999999999999999999999998 356789999
Q ss_pred eeeccEEEEecCCCcccchhhHHhhHHHHHHhhh--hcCCceEEEEeCCCcchhhhHHHHHHHhcCCCceecCCCCCcee
Q 037469 130 NHSVPAILFSNGGYAGNIFHDFSDIIIPLYINSR--QFNGQVQFVITNKQSWWINKYQNILKKLSRYDIIDIDNQDDIHC 207 (429)
Q Consensus 130 ~~~~Pavvfs~~gy~~N~fH~f~D~liPlf~t~~--~f~~~v~lvi~d~~p~w~~~y~~ll~~lS~~~vi~l~~d~~~~C 207 (429)
+|++|+++|++|||+||.||+|+|+++|||+|.+ .|+++|++++++.++||..||.+++++||+||+++++++..+||
T Consensus 165 ~~~~pa~vfs~Gg~tgn~yhdf~d~~ipL~it~~~~~~n~ev~~li~~~~~ww~~kf~Dvv~~lSn~~~v~~~~~~~Thc 244 (475)
T KOG4698|consen 165 NHEVPAIVFSTGGYTGNEYHDFNDGIIPLFITEAELRFNKEVQFLITETHSWWDMKFGDVVRQLSNYPVVDFDAELRTHC 244 (475)
T ss_pred ecccchheeecCCcchhhHHHHHhhhhhhhcccchhcccccEEEEEEEcchhhhhhHHHHHHhcCCCceEEecCCceEEE
Confidence 9999999999999999999999999999999999 78999999999999999999999999999999999999999999
Q ss_pred cCceeecccccCCcccccCCCCc----hhHHHHHHHHHHhcCCCccccccccCCCCCCCeEEEEecCCCccccCHHHHHH
Q 037469 208 FPRGIIGLKRHDRELNINSSESP----YSIKDFRQFIRSSYSLQKPAAIRLRDGEKKKPRLLIVSRKRTRAFTNAEEIAQ 283 (429)
Q Consensus 208 F~~~iVGl~~~~~~l~idp~~sp----~s~~~F~~fl~~~y~l~~~~~~~l~~~~~~~prlliisR~~~R~i~Ne~ev~~ 283 (429)
|.+++|||.. |.++.++|+..+ ++|.+|++++..+|+...+....-...+.++||+++++|.++|.|+||+||.+
T Consensus 245 F~~~~vgL~~-h~~y~v~~t~~~~~~~~s~~~fr~~l~~a~~~~i~~~~~t~~~~~kkpri~~lsR~~~r~Ilne~el~~ 323 (475)
T KOG4698|consen 245 FKEAIVGLVS-HFPYAVNPTQPPPNGTLSMLDFRNLLDKALSPRIPEANVTAPEPWKKPRITILSRAGSRAILNEDELPR 323 (475)
T ss_pred eeeeeeeeee-cccccccCCcCCCccccccccHHHHHHHHhcccccccccCCcChhhCCceEEEecccchhhhcchhhhH
Confidence 9999999999 799999887644 68999999999999864322111011246689999999999999999999999
Q ss_pred HHHhcCCEEEEeeCC-CCHHHHHHHhccCcEEEEechhhhhhhcccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCeE
Q 037469 284 MGRRLGFNVVVAEAN-GNLSRFAETVNYCDVFLAVHGAAMTNMIFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 284 ~l~~~Gf~V~v~e~~-~~~~q~~~l~~sadVlVGvHGAGLTN~lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
++++.||+|.+++++ +++..++++.+++|||+|||||||||++|+||++++|||.|+|+.+|.+..+|..+|+.|+++|
T Consensus 324 ~~~~~gf~v~~~~~~~t~v~~~~~i~~s~~vmiGvHGa~lth~lfl~~~~~~iqi~pcg~~~w~a~~a~~~p~k~~~l~y 403 (475)
T KOG4698|consen 324 MLEDIGFEVSVLRPDRTEVAKQLRITNSSDVMIGVHGAGLTHLLFLPPWAGVIQIYPCGDPGWAAKLARLRPAKYMTLEY 403 (475)
T ss_pred HHHhCCCceEEecccccchhhhhheeeccceeeeccCccceeEEecCCcceEEEEEECCCccchhhhhhccccceecccc
Confidence 999999999999997 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCcccccCCCCCccccCCCccccccchhhh-hhccccceEEEehhhHHHHHHHHHHHh
Q 037469 363 LEYKIKLDESTLIQQYPLDHQVIRDPSSIGKQGWNAFR-SVYMVQQNVKVDLNRFRSTLLKALELL 427 (429)
Q Consensus 363 ~~y~i~~~Essl~~~y~~dh~v~~DP~~~~~~gw~~~~-~~yl~~Qdv~lD~~rF~~~L~~al~~L 427 (429)
.+|+|.++||+|.++|++||+++.||.++.+.||+.++ .+||..|+|++|+.||++.+.+|++..
T Consensus 404 ~~ykI~~~es~l~~~y~~d~~~v~dp~s~~~~~f~~~k~~~yl~~q~v~ld~nRf~~~~~~a~~~~ 469 (475)
T KOG4698|consen 404 AEYKIRAEESELYHKYGGDNTIVFDPISFQKKGFEETKKKVYLELQAVRLDINRFRKTLVKAYLKE 469 (475)
T ss_pred ceeEEeecccceeeeccCCCceecccceeccccceeeeeeeeEeEeeeehhhhhcccchhHHHHHH
Confidence 99999999999999999999999999999999999987 899999999999999999999998754
|
|
| >PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61 | Back alignment and domain information |
|---|
| >COG4421 Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 429 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 1e-04
Identities = 41/296 (13%), Positives = 91/296 (30%), Gaps = 87/296 (29%)
Query: 160 INSRQFNGQVQFVITNKQ---SWWINKYQNILKKLSRYDIIDIDNQDDIHCFPRGIIGLK 216
+ S+Q +FV + + ++ + ++ S + I+
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE---------------- 114
Query: 217 RHDRELNINSSESPYSIKDFRQFIRSSYSLQKPAAIRLRDGEKKKPRLLIVSRKRTRAFT 276
+ DR N N + Y++ + +++ L++ A + LR + ++
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLK----LRQ-ALLELRPAKN------VL--------- 154
Query: 277 NAEEIAQMGRRLGF--NVVVAEANGNLSRFAETVNYCDVF-LAVHGAAMTNMIFLPENAV 333
I + G V + + + +F L + + +
Sbjct: 155 ----IDGVL---GSGKTWVALDVCLSYKV--QCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 334 FIQVVPFGGFAWLARTDYEEPAKAMKLRYLEYKIKLDESTLIQQYP-----LDHQVIRDP 388
Q+ P W +R+D+ +KLR + +L + Y L + +++
Sbjct: 206 LYQIDP----NWTSRSDHSSN---IKLRIHSIQAELRRLLKSKPYENCLLVLLN--VQNA 256
Query: 389 SSIGKQGWNAF------------RSVY---MVQQNVKVDLNRFRSTLLK--ALELL 427
+ WNAF + V + L+ TL LL
Sbjct: 257 KA-----WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00