Citrus Sinensis ID: 037495
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 369 | ||||||
| 356548309 | 374 | PREDICTED: delta(14)-sterol reductase-li | 1.0 | 0.986 | 0.804 | 1e-171 | |
| 224068965 | 367 | predicted protein [Populus trichocarpa] | 0.994 | 1.0 | 0.813 | 1e-170 | |
| 225440994 | 367 | PREDICTED: delta(14)-sterol reductase [V | 0.986 | 0.991 | 0.813 | 1e-169 | |
| 297820022 | 373 | hypothetical protein ARALYDRAFT_906674 [ | 1.0 | 0.989 | 0.761 | 1e-169 | |
| 18409727 | 369 | delta(14)-sterol reductase [Arabidopsis | 0.989 | 0.989 | 0.758 | 1e-162 | |
| 8917585 | 365 | C-14 sterol reductase [Arabidopsis thali | 0.989 | 1.0 | 0.758 | 1e-161 | |
| 353731074 | 369 | delta14-sterol reductase [Solanum lycope | 1.0 | 1.0 | 0.766 | 1e-161 | |
| 449440189 | 369 | PREDICTED: delta(14)-sterol reductase-li | 1.0 | 1.0 | 0.758 | 1e-155 | |
| 449500991 | 369 | PREDICTED: LOW QUALITY PROTEIN: delta(14 | 1.0 | 1.0 | 0.753 | 1e-154 | |
| 218202649 | 369 | hypothetical protein OsI_32423 [Oryza sa | 1.0 | 1.0 | 0.707 | 1e-152 |
| >gi|356548309|ref|XP_003542545.1| PREDICTED: delta(14)-sterol reductase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/369 (80%), Positives = 326/369 (88%)
Query: 1 MDLGFLLHAIIPSVDSAAILITFLTYLAIAGSILPGKVVPGAVLQDGTRLHYLCNGLFAL 60
+DLGFLL A+ PS +S +L+ F TYLA+AGSILPGK+VPG L DGTRLHY CNGL +L
Sbjct: 6 VDLGFLLQALTPSWNSVPLLVGFFTYLAVAGSILPGKLVPGVALLDGTRLHYCCNGLLSL 65
Query: 61 TLLVALLGFGAYMNFISATVISDRGFELLSTTFIFSVLVTSALYVAGCRSRNKSSSLKPH 120
LLVALLG GA M F+S T ISDRG ELLSTTF FS LVT L+ +GC+S++K SSLKPH
Sbjct: 66 LLLVALLGIGAKMGFVSPTAISDRGLELLSTTFAFSFLVTLILHFSGCKSQSKGSSLKPH 125
Query: 121 VTGNLIHDWWFGIQLNPQFMAIDLKFFFVRAGMMGWLLINLSVLAKSIQDGTLCRSMILY 180
++GNLIHDWWFGIQLNPQFM IDLKFFFVRAGMMGWLLINLS+L KSIQDGTL +SMILY
Sbjct: 126 LSGNLIHDWWFGIQLNPQFMGIDLKFFFVRAGMMGWLLINLSILMKSIQDGTLSQSMILY 185
Query: 181 QLFCAAYILDYFIYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQGWWLLHNQVELP 240
QLFCA YILDYF++EEYMTSTWDIIAERLGFMLVFGDLVWIPF+FSIQGWWLL N VEL
Sbjct: 186 QLFCALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLVWIPFSFSIQGWWLLMNSVELT 245
Query: 241 TATVIANCIIFLIGYMVFRGANKQKHVFKKNPKIHIWGKPPKVIGGKLLASGYWGMARHC 300
A ++ANC +FLIGYMVFRGANKQKHVFKKNPK IWGKPPKVIGGKLLASGYWG+ARHC
Sbjct: 246 PAAIVANCFVFLIGYMVFRGANKQKHVFKKNPKAPIWGKPPKVIGGKLLASGYWGIARHC 305
Query: 301 NYLGDLLLALSFSLPCGTSSLVPYFYPIYLVILLIWRERRDEARCAAKYREIWVEYCRLV 360
NYLGDL+LALSFSLPCG SS +PYFYPIYL+ILLIWRERRDEARCA KYREIW EY +LV
Sbjct: 306 NYLGDLMLALSFSLPCGISSPIPYFYPIYLLILLIWRERRDEARCAEKYREIWAEYRKLV 365
Query: 361 PWRILPYFY 369
PWRILPY Y
Sbjct: 366 PWRILPYVY 374
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224068965|ref|XP_002326242.1| predicted protein [Populus trichocarpa] gi|222833435|gb|EEE71912.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225440994|ref|XP_002283576.1| PREDICTED: delta(14)-sterol reductase [Vitis vinifera] gi|297740061|emb|CBI30243.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297820022|ref|XP_002877894.1| hypothetical protein ARALYDRAFT_906674 [Arabidopsis lyrata subsp. lyrata] gi|297323732|gb|EFH54153.1| hypothetical protein ARALYDRAFT_906674 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18409727|ref|NP_566975.1| delta(14)-sterol reductase [Arabidopsis thaliana] gi|20138022|sp|Q9LDR4.2|ERG24_ARATH RecName: Full=Delta(14)-sterol reductase; AltName: Full=C-14 sterol reductase; AltName: Full=Protein FACKEL; AltName: Full=Sterol C14-reductase gi|8980706|gb|AAF82283.1|AF256536_1 sterol C-14 reductase FACKEL [Arabidopsis thaliana] gi|8980704|gb|AAF82282.1| sterol C-14 reductase FACKEL [Arabidopsis thaliana] gi|9082182|gb|AAF82768.1| C-14 sterol reductase [Arabidopsis thaliana] gi|17473516|gb|AAL38381.1| AT3g52940/F8J2_111 [Arabidopsis thaliana] gi|22137270|gb|AAM91480.1| AT3g52940/F8J2_111 [Arabidopsis thaliana] gi|110742632|dbj|BAE99228.1| sterol C-14 reductase [Arabidopsis thaliana] gi|332645492|gb|AEE79013.1| delta(14)-sterol reductase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|8917585|gb|AAF81279.1|AF257178_1 C-14 sterol reductase [Arabidopsis thaliana] gi|9714052|emb|CAC01296.1| sterol C-14 reductase (FACKEL) [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|353731074|ref|NP_001238799.1| delta14-sterol reductase [Solanum lycopersicum] gi|303275231|gb|ADM07459.1| delta14-sterol reductase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
| >gi|449440189|ref|XP_004137867.1| PREDICTED: delta(14)-sterol reductase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449500991|ref|XP_004161248.1| PREDICTED: LOW QUALITY PROTEIN: delta(14)-sterol reductase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|218202649|gb|EEC85076.1| hypothetical protein OsI_32423 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 369 | ||||||
| TAIR|locus:2085146 | 369 | FK "FACKEL" [Arabidopsis thali | 0.989 | 0.989 | 0.699 | 9.3e-146 | |
| DICTYBASE|DDB_G0267448 | 381 | DDB_G0267448 "erg4/erg24 famil | 0.964 | 0.934 | 0.429 | 1e-75 | |
| UNIPROTKB|E2RS95 | 418 | TM7SF2 "Uncharacterized protei | 0.937 | 0.827 | 0.388 | 7.3e-59 | |
| MGI|MGI:1920416 | 418 | Tm7sf2 "transmembrane 7 superf | 0.962 | 0.849 | 0.384 | 9.3e-59 | |
| RGD|1311205 | 418 | Tm7sf2 "transmembrane 7 superf | 0.962 | 0.849 | 0.384 | 9.3e-59 | |
| UNIPROTKB|Q14739 | 615 | LBR "Lamin-B receptor" [Homo s | 0.918 | 0.551 | 0.395 | 2.2e-57 | |
| UNIPROTKB|Q17QS8 | 418 | TM7SF2 "Delta(14)-sterol reduc | 0.926 | 0.818 | 0.387 | 3.6e-57 | |
| UNIPROTKB|Q8WMV1 | 418 | TM7SF2 "Delta(14)-sterol reduc | 0.926 | 0.818 | 0.387 | 4.6e-57 | |
| UNIPROTKB|O76062 | 418 | TM7SF2 "Delta(14)-sterol reduc | 0.956 | 0.844 | 0.378 | 1.6e-56 | |
| RGD|620813 | 620 | Lbr "lamin B receptor" [Rattus | 0.918 | 0.546 | 0.375 | 1.6e-56 |
| TAIR|locus:2085146 FK "FACKEL" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
Identities = 258/369 (69%), Positives = 292/369 (79%)
Query: 1 MDLGFLLHAIIPSVDSAAILITFLTYLAIAGSILPGKVVPGAVLQDGTRLHYLCNXXXXX 60
MDLG LL PS+ S +L+ + YLA+AG ILPGKV+ G +L DG++L Y CN
Sbjct: 5 MDLGVLL----PSLQSVYVLVFYFVYLAVAGEILPGKVIRGVLLSDGSQLRYRCNGLLAL 60
Query: 61 XXXXXXXXXXXYMNFISATVISDRGFELLSTTFIFSVLVTSALYVAGCRSRNKSSSLKPH 120
+ +S V++DRG ELLS TFIF VLVT ALYV G S NK SSLKPH
Sbjct: 61 ILLVAILGICAKLGIVSPLVVADRGLELLSATFIFCVLVTLALYVTGRSSSNKGSSLKPH 120
Query: 121 VTGNLIHDWWFGIQLNPQFMAIDLKFFFVRAGMMGWLLINLSVLAKSIQDGTLCRSMILY 180
V+GNL+HDWWFGIQLNPQFM+IDLKFFFVRAGMMGWLLINLS+LAKS+QDG+L +SMILY
Sbjct: 121 VSGNLVHDWWFGIQLNPQFMSIDLKFFFVRAGMMGWLLINLSILAKSVQDGSLSQSMILY 180
Query: 181 QLFCAAYILDYFIYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQGWWLLHNQVELP 240
Q+FCA YILDYF++EEYMTSTWDIIAERLGFMLVFGDL+WIPFTFSIQGWWLLHN+VEL
Sbjct: 181 QIFCALYILDYFVHEEYMTSTWDIIAERLGFMLVFGDLLWIPFTFSIQGWWLLHNKVELT 240
Query: 241 TATVIANCIIFLIGYMVFRGANKQKHVFKKNPKIHIWGKPPKVIGGKLLASGYWGMARHC 300
++ NC++FLIGYMVFRGANKQKH+FKKNPK IWGKPP V+GGKLL SGYWG+ARHC
Sbjct: 241 VPAIVVNCLVFLIGYMVFRGANKQKHIFKKNPKTPIWGKPPVVVGGKLLVSGYWGIARHC 300
Query: 301 NYXXXXXXXXXXXXPCGTSSLVPYFYPIYLVILLIWRERRDEARCAAKYREIWVEYCRLV 360
NY PCG SS VPYFYPIYL+ILLIWRERRDE RCA KY+EIW EY RLV
Sbjct: 301 NYLGDLMLALSFSLPCGISSPVPYFYPIYLLILLIWRERRDEVRCAEKYKEIWAEYLRLV 360
Query: 361 PWRILPYFY 369
PWRILPY Y
Sbjct: 361 PWRILPYVY 369
|
|
| DICTYBASE|DDB_G0267448 DDB_G0267448 "erg4/erg24 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RS95 TM7SF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| MGI|MGI:1920416 Tm7sf2 "transmembrane 7 superfamily member 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1311205 Tm7sf2 "transmembrane 7 superfamily member 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q14739 LBR "Lamin-B receptor" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q17QS8 TM7SF2 "Delta(14)-sterol reductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8WMV1 TM7SF2 "Delta(14)-sterol reductase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O76062 TM7SF2 "Delta(14)-sterol reductase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|620813 Lbr "lamin B receptor" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 369 | |||
| pfam01222 | 429 | pfam01222, ERG4_ERG24, Ergosterol biosynthesis ERG | 9e-84 | |
| COG2020 | 187 | COG2020, STE14, Putative protein-S-isoprenylcystei | 1e-05 | |
| pfam06966 | 235 | pfam06966, DUF1295, Protein of unknown function (D | 9e-04 |
| >gnl|CDD|216371 pfam01222, ERG4_ERG24, Ergosterol biosynthesis ERG4/ERG24 family | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 9e-84
Identities = 140/359 (38%), Positives = 207/359 (57%), Gaps = 10/359 (2%)
Query: 19 ILITFLTYLAIAGSILPGKVVPGAVLQDGTRLHYLCNGLFALTLLVALLGFGAYMNFISA 78
+ + + + A+ LPGKVV G L +G +L Y N ++ L +A +G Y
Sbjct: 73 VFLLWYFFQAVFYLTLPGKVVEGLPLSNGRKLPYKINAFWSFLLTLAAIGVLHYTQLFEL 132
Query: 79 TVISDRGFELLSTTFIFSVLVTSALYVAGCRSRNKSSSLKPH-VTGNLIHDWWFGIQLNP 137
T + D +++S+ +FS + LYV ++ + P +GNLI+D++ G +LNP
Sbjct: 133 TYLYDNFVQIMSSAILFSFALAIYLYVRSLKAPEEDK-DAPGGNSGNLIYDFFIGRELNP 191
Query: 138 QFMAIDLKFFF-VRAGMMGWLLINLSVLAKSIQD-GTLCRSMILYQLFCAAYILDYFIYE 195
+ ++D+K FF +R G++GW+ INL+ L K + G + S++ L Y+ D E
Sbjct: 192 RIGSLDIKMFFELRPGLLGWVFINLAALLKQYETYGYVTPSLLFVLLNQLLYVFDGLKNE 251
Query: 196 EYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQGWWLLHNQVELPTAT-VIANCIIFLIG 254
E + +T DI + GFML FGDLVW+PFT+S+Q +L + EL +T +A + L G
Sbjct: 252 EAVLTTMDITTDGFGFMLAFGDLVWVPFTYSLQTRYLSVHPSELGWSTYAVAIYALLLCG 311
Query: 255 YMVFRGANKQKHVFKKNPKIHIWGKPPKVI----GGKLLASGYWGMARHCNYLGDLLLAL 310
Y +FR AN QK+ F+ NP K I G LL G+WG ARH NYLGD L +L
Sbjct: 312 YYIFRSANSQKNNFRTNPADP-KLIYLKYIQTKTGSGLLTDGWWGFARHINYLGDWLQSL 370
Query: 311 SFSLPCGTSSLVPYFYPIYLVILLIWRERRDEARCAAKYREIWVEYCRLVPWRILPYFY 369
S+SLP G +S++PYFYP+Y +LL+ RE RDE +C KY W EYC+ VP+ I+PY Y
Sbjct: 371 SWSLPTGFNSVLPYFYPLYFAVLLVHREARDEHKCKKKYGLDWEEYCKRVPYHIIPYVY 429
|
Length = 429 |
| >gnl|CDD|224931 COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 369 | |||
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 100.0 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 100.0 | |
| PF06966 | 235 | DUF1295: Protein of unknown function (DUF1295); In | 99.93 | |
| COG3752 | 272 | Steroid 5-alpha reductase family enzyme [General f | 99.89 | |
| PLN02392 | 260 | probable steroid reductase DET2 | 99.88 | |
| KOG1638 | 257 | consensus Steroid reductase [Lipid transport and m | 99.83 | |
| KOG4650 | 311 | consensus Predicted steroid reductase [General fun | 99.78 | |
| COG2020 | 187 | STE14 Putative protein-S-isoprenylcysteine methylt | 99.77 | |
| PF04191 | 106 | PEMT: Phospholipid methyltransferase ; InterPro: I | 99.55 | |
| PF02544 | 150 | Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase | 99.51 | |
| PLN02560 | 308 | enoyl-CoA reductase | 99.44 | |
| KOG2628 | 201 | consensus Farnesyl cysteine-carboxyl methyltransfe | 99.35 | |
| PLN03164 | 323 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 99.33 | |
| PF04140 | 94 | ICMT: Isoprenylcysteine carboxyl methyltransferase | 99.12 | |
| KOG1640 | 304 | consensus Predicted steroid reductase [Lipid trans | 98.42 | |
| COG1755 | 172 | Uncharacterized protein conserved in bacteria [Fun | 98.03 | |
| KOG1639 | 297 | consensus Steroid reductase required for elongatio | 97.33 | |
| PF07298 | 191 | NnrU: NnrU protein; InterPro: IPR009915 This famil | 97.24 | |
| COG4094 | 219 | Predicted membrane protein [Function unknown] | 92.12 |
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-111 Score=850.91 Aligned_cols=359 Identities=44% Similarity=0.783 Sum_probs=342.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhccCCceeecCcccCCCCccccccchHHHHHHHHHHHHHHHhhhccchHhhHhhhHHHH
Q 037495 10 IIPSVDSAAILITFLTYLAIAGSILPGKVVPGAVLQDGTRLHYLCNGLFALTLLVALLGFGAYMNFISATVISDRGFELL 89 (369)
Q Consensus 10 ~~~~~~a~~~y~~~~~~~~~l~~~lPG~~~~G~~l~~G~rl~Y~~Ngl~~~~~t~~~~~~~~~~~~~~~~~i~d~~~~l~ 89 (369)
..||++|+++|++|+++|++++.++|||+++|+|+|||+|++|||||++++++|+++++++++.+.+++++|+||++|++
T Consensus 64 ~~~~~~a~~~~~~~~~~qa~l~~~lPG~~v~G~~l~~G~rL~Yk~NGl~~~~~tl~~~~~l~~~~~~~~~~i~d~~~~L~ 143 (432)
T PF01222_consen 64 ALWDWEAWKVYLAWFAFQALLYLVLPGKRVEGPPLPDGKRLKYKCNGLQSFLVTLALFAVLHYYGIFPLTFIYDHFGQLL 143 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCceEEECcCcCCCCcccEEeCCHHHHHHHHHHHHHHHHcCCCChHhHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCC----CCCCCCCCCCcchhhhhcccccCcccccccchhh-hhchhHHHHHHHHHHHH
Q 037495 90 STTFIFSVLVTSALYVAGCRSRNK----SSSLKPHVTGNLIHDWWFGIQLNPQFMAIDLKFF-FVRAGMMGWLLINLSVL 164 (369)
Q Consensus 90 ~~~~i~s~~~s~~ly~k~~~~~~~----~~~~~~~~sg~~iyDff~G~elnPrig~~d~K~f-~~R~~~~~~~l~~~s~~ 164 (369)
+++|++|+++|+++|+||+..++. .++ .+++|||+|||||||+|||||||++|+||| |+||||++|.++|+|++
T Consensus 144 ~~~~i~s~~~s~~lyik~~~~~~~~~d~~l~-~~~~sGn~iyDff~G~ELNPRig~~DlK~F~e~R~gli~w~li~ls~a 222 (432)
T PF01222_consen 144 TAANIFSFILSIFLYIKSFRAPSHPKDRQLA-PGGNSGNFIYDFFMGRELNPRIGGFDLKMFCELRPGLIGWLLINLSFA 222 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCcccccccc-ccCCCCceeeeeeeccccCCCeeeEeeeeeeccChHHHHHHHHHHHHH
Confidence 999999999999999999876652 222 356899999999999999999999999999 69999999999999999
Q ss_pred HHhh-hcCCcchhHHHHHHHHHHHHhhhhcccccccchhHHHhhhhhhHHHhhhhhhHHHHhhhheeeeeeCCCCCchH-
Q 037495 165 AKSI-QDGTLCRSMILYQLFCAAYILDYFIYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQGWWLLHNQVELPTA- 242 (369)
Q Consensus 165 ~~q~-~~g~~s~~~~~~~~~~~~Yv~~~~~~E~~~~~t~di~~e~~G~~l~~g~l~~vPf~y~l~~~yl~~~~~~l~~~- 242 (369)
+||| ++|++|+||++++++|.+|++|++++|+++++||||++|+||||++|||++|+||+||+|++|++.||.+++++
T Consensus 223 ~~qye~~G~vs~sm~~~~~~~~~Yv~d~~~~E~~~l~t~Di~~d~fGfml~~g~l~~vPf~Yt~~~~yl~~~p~~l~~~~ 302 (432)
T PF01222_consen 223 AKQYEQYGYVSPSMILVVLLQFLYVLDFFWNEEGYLTTMDITHDGFGFMLCFGDLVWVPFTYTLQARYLVDHPVELSWPT 302 (432)
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHhhhhhheeeeeeEcCccceeehhhHhhhhHhhhcceeEEEeCCccCCcHH
Confidence 9999 69999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcCC---CCCceeCCeeeeccccccccCcccHHHHHHHHHHHHhhcCC
Q 037495 243 TVIANCIIFLIGYMVFRGANKQKHVFKKNPKIHIWG---KPPKVIGGKLLASGYWGMARHCNYLGDLLLALSFSLPCGTS 319 (369)
Q Consensus 243 ~~~~~~~l~~~G~~i~~~ad~Qk~~fr~~~~~~~~~---~~~~~~~~~Ll~sG~w~~~RHPnY~G~il~~~g~~l~~g~~ 319 (369)
..+++.++.++|++|++.||+||++||++|++|.+. ..++.+|+||++|||||++|||||+||++++++||++||++
T Consensus 303 ~~~~i~~l~~~gy~i~r~sn~QK~~FR~~p~~p~~~~~~~~~t~~G~~LL~SGwWg~~Rh~NY~gdil~a~aw~l~~gf~ 382 (432)
T PF01222_consen 303 YAAAILALGLVGYYIFRGSNSQKNRFRRNPKDPKVIHLKYIPTKRGSKLLVSGWWGIARHPNYLGDILMALAWCLPCGFS 382 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHHhcCCCCCCcccccceeecCCCCeEEEcChhHhhcccchHHHHHHHHHHHHHHhcC
Confidence 588889999999999999999999999999998765 44556689999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHhhccHhHHHHHHHhhhHHHHHHhhCCcceecccC
Q 037495 320 SLVPYFYPIYLVILLIWRERRDEARCAAKYREIWVEYCRLVPWRILPYFY 369 (369)
Q Consensus 320 ~~~~~~~~i~~~~ll~~R~~r~E~~~~~kyG~~y~~Y~~~V~~r~IP~Iy 369 (369)
+++||++++|++++++||+.|||+||++|||++|+|||++||||+||+||
T Consensus 383 ~~~pyfy~~~~~~lL~hR~~RD~~rC~~KYG~~W~~Yc~~Vpy~~iP~iy 432 (432)
T PF01222_consen 383 SILPYFYPIFFTILLIHRARRDEERCRKKYGKDWDEYCKRVPYRIIPGIY 432 (432)
T ss_pred ccHHHHHHHHHHHHHhhhHHHHHHHHHHhhCHHHHHHHHhCCEEEeCCcC
Confidence 99999999999999999999999999999999999999999999999997
|
They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane |
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long | Back alignment and domain information |
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| >COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02392 probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >KOG1638 consensus Steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4650 consensus Predicted steroid reductase [General function prediction only] | Back alignment and domain information |
|---|
| >COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 | Back alignment and domain information |
|---|
| >PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG1755 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins | Back alignment and domain information |
|---|
| >COG4094 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 369 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 9e-06 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Length = 194 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 9e-06
Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 10/186 (5%)
Query: 182 LFCAAYILDYFIYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQGWWLLHNQVELPT 241
+ + E+ L F +V++P T + N + LP
Sbjct: 17 WVFVRKVYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFSSYLDSFN-INLPD 75
Query: 242 ATVIANCIIFLIGYMVFRGANKQKHVFKKNPKIHIWGKPPKVIGGKLLASGYWGMARHCN 301
+ + I+ + +F +K N + G KL+ G + RH
Sbjct: 76 SIRLFALIVTFLNIGLFTKIHKD---LGNNWSAIL----EIKDGHKLVKEGIYKNIRHPM 128
Query: 302 YLGDLLLALSFSLPCGTSSLVPYFYPIYLVILLIWRERRDEARCAAKYREIWVEYCRLVP 361
Y L ++ + + +V F + IL R ++E ++ + ++EY
Sbjct: 129 YAHLWLWVITQGIILS-NWVVLIFGIVAWAILYFIRVPKEEELLIEEFGDEYIEYMGKTG 187
Query: 362 WRILPY 367
R+ P
Sbjct: 188 -RLFPK 192
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 369 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 99.92 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=198.10 Aligned_cols=169 Identities=17% Similarity=0.188 Sum_probs=116.6
Q ss_pred HHHhhhhcccccccchhHHHhhhhhhHHHhhhhhhHHHHhhhheeeeeeCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 037495 186 AYILDYFIYEEYMTSTWDIIAERLGFMLVFGDLVWIPFTFSIQGWWLLHNQVELPTATVIANCIIFLIGYMVFRGANKQK 265 (369)
Q Consensus 186 ~Yv~~~~~~E~~~~~t~di~~e~~G~~l~~g~l~~vPf~y~l~~~yl~~~~~~l~~~~~~~~~~l~~~G~~i~~~ad~Qk 265 (369)
.+..+.-.+|..... |-..|.......+-.+..+|.+.....+- ...+.+++.+...+|+++.++|+.++..|+.|.
T Consensus 23 ~~~~~~~~~~~~~~~--~~~~e~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~p~~~~~~G~~l~l~G~~l~~~a~~~L 99 (194)
T 4a2n_B 23 VYGTRAMKNKSKKKV--RPNFEKSLVFLNFIGMVFLPLTAVFSSYL-DSFNINLPDSIRLFALIVTFLNIGLFTKIHKDL 99 (194)
T ss_dssp HHHHHHSSSCEEECC--SHHHHHHHHHHHHHHHTHHHHHHHSCSGG-GGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccchhcc--ccchHHHHHHHHHHHHHHHHHHHHHhcCc-chhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444443322 33334333333333334556655432220 011235677788899999999999999999997
Q ss_pred HHH-hhCCCCCcCCCCCceeCCeeeeccccccccCcccHHHHHHHHHHHHhhcCCCchhHH-HHHHHHHHHHhhccHhHH
Q 037495 266 HVF-KKNPKIHIWGKPPKVIGGKLLASGYWGMARHCNYLGDLLLALSFSLPCGTSSLVPYF-YPIYLVILLIWRERRDEA 343 (369)
Q Consensus 266 ~~f-r~~~~~~~~~~~~~~~~~~Ll~sG~w~~~RHPnY~G~il~~~g~~l~~g~~~~~~~~-~~i~~~~ll~~R~~r~E~ 343 (369)
.++ +... ++ ..+++|+++|+|+++|||||+|++++++|+++.++ ++++.+ .++.++.++..|..+||+
T Consensus 100 g~~f~~~~-------~~-~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~--s~~~~~~~~~~~~~~~~~ri~~EE~ 169 (194)
T 4a2n_B 100 GNNWSAIL-------EI-KDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILS--NWVVLIFGIVAWAILYFIRVPKEEE 169 (194)
T ss_dssp GGGCCSSC-------CE-ETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCC-------CC-CCCCeeeecCcchhccCccHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 3221 11 12789999999999999999999999999999874 555554 344455566788889999
Q ss_pred HHHHHhhhHHHHHHhhCCcceeccc
Q 037495 344 RCAAKYREIWVEYCRLVPWRILPYF 368 (369)
Q Consensus 344 ~~~~kyG~~y~~Y~~~V~~r~IP~I 368 (369)
.|++|||++|++||++|| |+||+|
T Consensus 170 ~L~~~fG~~Y~~Y~~rv~-r~iP~i 193 (194)
T 4a2n_B 170 LLIEEFGDEYIEYMGKTG-RLFPKV 193 (194)
T ss_dssp HHHHHHTHHHHHHHHHCB-SSSCC-
T ss_pred HHHHHhCHHHHHHHHhCC-eeCcee
Confidence 999999999999999999 999997
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00