Citrus Sinensis ID: 037501

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW
cEEEEEEEEEccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHccccccccEEEEEcccccHHHHHHccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEEEccccEEEcEEEEEcccccccccccccEEEEEEcccccccccccHHHHccccccccccHHHHHHHHHcccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEEEcccccccccccccccccccccEEEEEEcccccccccc
ccEEEEEEEEEcccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHccHHHHHcccEEEEEcccHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccccHHHHHcccccccccccccEEEEccccEEEEEEEEccccccccccccccccEEEEEcccccEEEEEEcccccHHHHHHHHHccccccccEEEEccccccccccccccEEEEEEHcccccccccccccHHHcccccccccHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccEEEEEEEEEcccccccccccccccccccccEEEEEEEcccccHHcc
myrftvhsfqksktqpnlWVLAVYTfghkdlptcEMWVNRVNAFLNMEVGRPKNLLIFihpmsgkgsgrrtwETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTknkelssydgvlavggdgfFNEILNGFLssrykapyppapagfvhpvgndhcssdhdlnetvtetsqhdedqshqdqspllgseqyhgsrlpnsnqdtdfripserfrfgiipagstdAIVICttgardpvtSALHIVLGKRVCLDIAQVVRWKatatskveplvhytasfsgygfygdvisesekyrwmgpkrydyagtkVFLRHRSYEAEIAYLEVDaehtnsvsnkgyscsraqtfrnsnkceRVICRRncnicntnsvdmsstatsrtpyfrpeeARWLRSKGRFLSVGAAIISnrnerapdglvvdahlsdgFMHLILIKDcpralylw
myrftvhsfqksktqpnlWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPmsgkgsgrrTWETVAPIfvrakvntkVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWkatatskveplvhytasfsgygfYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVdaehtnsvsnkgyscsraqtfrnsnkcervICRRNCnicntnsvdmsstatsrtpyfrpeearwlrsKGRFLSVGAAIisnrnerapdGLVVDAHLSDGFMHLILIKDcpralylw
MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETsqhdedqshqdqsPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVicrrncnicnTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW
**************QPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLS**************************************************************************SERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVD**********YFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYL*
MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFL***VGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRW****TSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEV*********************************************************RPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW
************KTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLN********************LLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW
MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVD*********************************************************P*EARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW
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MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query438 2.2.26 [Sep-21-2011]
Q8TCT0 537 Ceramide kinase OS=Homo s yes no 0.486 0.396 0.349 6e-32
Q8K4Q7531 Ceramide kinase OS=Mus mu yes no 0.465 0.384 0.363 8e-31
Q9TZI1549 Ceramide kinase 1 OS=Caen yes no 0.525 0.418 0.256 4e-21
Q49MI3558 Ceramide kinase-like prot no no 0.721 0.566 0.234 6e-15
Q9LRB0 763 Sphingoid long-chain base no no 0.271 0.155 0.363 5e-12
O14159458 Sphingoid long chain base yes no 0.214 0.205 0.371 1e-11
Q18425473 Sphingosine kinase 1 OS=C no no 0.219 0.202 0.368 7e-07
Q91V26383 Sphingosine kinase 1 OS=R no no 0.180 0.206 0.289 2e-06
Q8CI15382 Sphingosine kinase 1 OS=M no no 0.180 0.206 0.289 2e-06
Q6B516 760 Sphingosine kinase B OS=D yes no 0.273 0.157 0.303 4e-06
>sp|Q8TCT0|CERK1_HUMAN Ceramide kinase OS=Homo sapiens GN=CERK PE=1 SV=1 Back     alignment and function desciption
 Score =  139 bits (349), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 115/243 (47%), Gaps = 30/243 (12%)

Query: 197 NSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVR 256
           + N      +PS   R GIIPAGSTD +   T G  D  TSALHIV+G  + +D++ V  
Sbjct: 218 DQNHPRAVLVPSS-LRIGIIPAGSTDCVCYSTVGTSDAETSALHIVVGDSLAMDVSSV-- 274

Query: 257 WKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYEAE 316
                      L+ Y+ S  GYGFYGD+I +SEK RW+G  RYD++G K FL H  YE  
Sbjct: 275 ------HHNSTLLRYSVSLLGYGFYGDIIKDSEKKRWLGLARYDFSGLKTFLSHHCYEGT 328

Query: 317 IAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVDMSSTATSRT 376
           +++L   A+HT                      +R  CR  C +C  +   +        
Sbjct: 329 VSFLP--AQHTVGSPR-----------------DRKPCRAGCFVCRQSKQQLEEEQKKAL 369

Query: 377 PYFRPEE--ARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRA 434
                 E    W    G+FL++ A  +S    R+P GL   AHL DG   LILI+ C R 
Sbjct: 370 YGLEAAEDVEEWQVVCGKFLAINATNMSCACRRSPRGLSPAAHLGDGSSDLILIRKCSRF 429

Query: 435 LYL 437
            +L
Sbjct: 430 NFL 432
Catalyzes specifically the phosphorylation of ceramide to form ceramide 1-phosphate. Acts efficiently on natural and analog ceramides (C6, C8, C16 ceramides, and C8-dihydroceramide), to a lesser extent on C2-ceramide and C6-dihydroceramide, but not on other lipids, such as various sphingosines. Binds phosphoinositides.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 3EC: 8
>sp|Q8K4Q7|CERK1_MOUSE Ceramide kinase OS=Mus musculus GN=Cerk PE=2 SV=2 Back     alignment and function description
>sp|Q9TZI1|CERK_CAEEL Ceramide kinase 1 OS=Caenorhabditis elegans GN=T10B11.2 PE=3 SV=1 Back     alignment and function description
>sp|Q49MI3|CERKL_HUMAN Ceramide kinase-like protein OS=Homo sapiens GN=CERKL PE=1 SV=1 Back     alignment and function description
>sp|Q9LRB0|LCBK1_ARATH Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana GN=LCBK1 PE=1 SV=1 Back     alignment and function description
>sp|O14159|LCB4_SCHPO Sphingoid long chain base kinase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lcb4 PE=3 SV=1 Back     alignment and function description
>sp|Q18425|SPHK1_CAEEL Sphingosine kinase 1 OS=Caenorhabditis elegans GN=sphk-1 PE=1 SV=1 Back     alignment and function description
>sp|Q91V26|SPHK1_RAT Sphingosine kinase 1 OS=Rattus norvegicus GN=Sphk1 PE=2 SV=1 Back     alignment and function description
>sp|Q8CI15|SPHK1_MOUSE Sphingosine kinase 1 OS=Mus musculus GN=Sphk1 PE=1 SV=1 Back     alignment and function description
>sp|Q6B516|SPHKB_DICDI Sphingosine kinase B OS=Dictyostelium discoideum GN=sgkB PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
224129896 627 predicted protein [Populus trichocarpa] 0.988 0.690 0.673 1e-176
225466018 622 PREDICTED: ceramide kinase-like [Vitis v 0.986 0.694 0.691 1e-175
297745052 614 unnamed protein product [Vitis vinifera] 0.986 0.703 0.691 1e-175
356510332 614 PREDICTED: ceramide kinase-like [Glycine 0.988 0.705 0.666 1e-169
357455811 618 Ceramide kinase [Medicago truncatula] gi 0.988 0.700 0.640 1e-164
356515369 612 PREDICTED: ceramide kinase-like [Glycine 0.984 0.704 0.657 1e-164
8843866533 unnamed protein product [Arabidopsis tha 0.961 0.789 0.593 1e-149
42568457 608 diacylglycerol kinase family protein [Ar 0.970 0.699 0.590 1e-149
297795933 608 hypothetical protein ARALYDRAFT_495199 [ 0.970 0.699 0.587 1e-148
449451864 586 PREDICTED: ceramide kinase-like [Cucumis 0.929 0.694 0.595 1e-146
>gi|224129896|ref|XP_002328830.1| predicted protein [Populus trichocarpa] gi|222839128|gb|EEE77479.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/447 (67%), Positives = 347/447 (77%), Gaps = 14/447 (3%)

Query: 1   MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIH 60
           MYRFTVHSFQKS+ QP LWVLAVY+FGHKDL TC+ WV+R+NA LN+E+GRPKNLL+FI+
Sbjct: 119 MYRFTVHSFQKSRGQPCLWVLAVYSFGHKDLQTCQTWVDRINASLNLEMGRPKNLLVFIN 178

Query: 61  PMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGG 120
           PMSGK SGRRTWE VAPIF RAKV TKVIVT+RAG AFDVMAS  N EL SY+GV+AVGG
Sbjct: 179 PMSGKASGRRTWEMVAPIFSRAKVKTKVIVTERAGHAFDVMASAANNELKSYNGVIAVGG 238

Query: 121 DGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQD 180
           DGFFNEILNGFL SR+KAP PP+P+  VH   +      H+ NE VTE +  +ED S   
Sbjct: 239 DGFFNEILNGFLLSRHKAPRPPSPSDIVHSDQSSGNGLFHNPNERVTEATCQNEDHS--- 295

Query: 181 QSPLLGSEQYHGSRLPN---------SNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGA 231
             PLL +  Y+G+R  N           QD +F +P E+FRFGIIPAGSTDAIV+CTTG 
Sbjct: 296 --PLLSNSVYNGTRQANFRTEDGTCNIGQDFEFPLPGEQFRFGIIPAGSTDAIVMCTTGT 353

Query: 232 RDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKY 291
           RDP+TSAL+IVLGK+VCLDIAQVVRWK T  S +EP V Y ASF+GYGFYGDVI+ESEKY
Sbjct: 354 RDPITSALNIVLGKKVCLDIAQVVRWKTTTASDIEPYVRYAASFAGYGFYGDVIAESEKY 413

Query: 292 RWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCER 351
           RWMGPKRYDYAGTKVFLRH SYEAE+AY+E ++E TN    KG   S  +  +   K ER
Sbjct: 414 RWMGPKRYDYAGTKVFLRHSSYEAEVAYIETESEKTNPTVEKGQLFSGLRKRQGPKKSER 473

Query: 352 VICRRNCNICNTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDG 411
           V+CR NC +CNT S  MS  +   TPY    E RWLRSKG+FLSVGAAIISNRNERAPDG
Sbjct: 474 VVCRTNCGVCNTKSDYMSKRSPCSTPYSSSGETRWLRSKGKFLSVGAAIISNRNERAPDG 533

Query: 412 LVVDAHLSDGFMHLILIKDCPRALYLW 438
           LV DAHLSDGF+HL++I+DCP ALYLW
Sbjct: 534 LVADAHLSDGFLHLLMIRDCPHALYLW 560

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225466018|ref|XP_002266214.1| PREDICTED: ceramide kinase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745052|emb|CBI38644.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356510332|ref|XP_003523893.1| PREDICTED: ceramide kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|357455811|ref|XP_003598186.1| Ceramide kinase [Medicago truncatula] gi|355487234|gb|AES68437.1| Ceramide kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356515369|ref|XP_003526373.1| PREDICTED: ceramide kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|8843866|dbj|BAA97392.1| unnamed protein product [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42568457|ref|NP_568756.2| diacylglycerol kinase family protein [Arabidopsis thaliana] gi|34223322|gb|AAQ62904.1| ceramide kinase [Arabidopsis thaliana] gi|332008679|gb|AED96062.1| diacylglycerol kinase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297795933|ref|XP_002865851.1| hypothetical protein ARALYDRAFT_495199 [Arabidopsis lyrata subsp. lyrata] gi|297311686|gb|EFH42110.1| hypothetical protein ARALYDRAFT_495199 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449451864|ref|XP_004143680.1| PREDICTED: ceramide kinase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
TAIR|locus:2176202608 ACD5 "ACCELERATED CELL DEATH 5 0.981 0.707 0.576 4.4e-132
UNIPROTKB|J9NZB9460 CERK "Uncharacterized protein" 0.299 0.284 0.430 7.4e-53
UNIPROTKB|F1Q445513 CERK "Uncharacterized protein" 0.299 0.255 0.430 3.1e-52
MGI|MGI:2386052531 Cerk "ceramide kinase" [Mus mu 0.287 0.237 0.442 3.5e-52
UNIPROTKB|Q8TCT0537 CERK "Ceramide kinase" [Homo s 0.253 0.206 0.467 8.4e-51
RGD|1305019531 Cerk "ceramide kinase" [Rattus 0.253 0.209 0.467 2e-50
UNIPROTKB|F1NF59497 CERK "Uncharacterized protein" 0.264 0.233 0.476 2.8e-50
ZFIN|ZDB-GENE-070112-2262 574 zgc:158263 "zgc:158263" [Danio 0.452 0.344 0.382 2.1e-49
UNIPROTKB|G3N1G9472 Bt.97968 "Uncharacterized prot 0.299 0.277 0.388 4.8e-40
UNIPROTKB|G3MXL8470 Bt.97968 "Uncharacterized prot 0.278 0.259 0.402 6.6e-40
TAIR|locus:2176202 ACD5 "ACCELERATED CELL DEATH 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
 Identities = 253/439 (57%), Positives = 318/439 (72%)

Query:     1 MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIH 60
             MYRFTVH FQ S  +P LW LA +TFGH DL TC+ W++++N  L  EV RP+NLL+F+H
Sbjct:   111 MYRFTVHGFQSSPKEPCLWNLAAFTFGHMDLQTCQSWMDQLNYSLIKEVERPRNLLVFVH 170

Query:    61 PMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGG 120
             P SGKG+G + WETV+ IF+RAKVNTKVIVT+RAG AFDVMAS +NKEL +YDG++AVGG
Sbjct:   171 PKSGKGNGSKVWETVSKIFIRAKVNTKVIVTERAGHAFDVMASIQNKELHTYDGIIAVGG 230

Query:   121 DGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETXXXXXXXXX-X 179
             DGFFNEILNG+L SR K P PP+P+   + V +   SS  +  + V ET           
Sbjct:   231 DGFFNEILNGYLLSRLKVPLPPSPSDSFNSVQSRGSSSVPEPGDEVHETDQKEHYPLLPD 290

Query:   180 XXXPLLGSEQYHGSRLPNSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDPVTSAL 239
                 ++     +GS      +D D    SER RFG+IPAGSTDAIV+CTTGARDPVTSAL
Sbjct:   291 SVQEVMNFRTVNGSC--EGIEDPDHPFSSERPRFGLIPAGSTDAIVMCTTGARDPVTSAL 348

Query:   240 HIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRY 299
             HI+LG+++ LD  QVVRWK  +TS +EP + Y ASF+GYGFYGDVISESEKYRWMGPKRY
Sbjct:   349 HIILGRKLFLDAMQVVRWKTASTSTIEPYIRYAASFAGYGFYGDVISESEKYRWMGPKRY 408

Query:   300 DYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVXXXXXXX 359
             DY GTK+FL+HRSYEAE+ + E ++E  NS ++  ++ S+   FRN+ + E++       
Sbjct:   409 DYVGTKIFLKHRSYEAEVMFEEAESE--NSKASL-HTRSKTWPFRNTTRSEKILCRANCK 465

Query:   360 XXXTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLS 419
                 + V  +S +T+  P   PE+ RW R+KGRFLS+GAA++SNRNERAPDGLVVDAHLS
Sbjct:   466 IC-NSKVGWNSASTTLNPC--PEKTRWCRTKGRFLSIGAAVMSNRNERAPDGLVVDAHLS 522

Query:   420 DGFMHLILIKDCPRALYLW 438
             DGF+HLILIKDC R  YLW
Sbjct:   523 DGFLHLILIKDCSRPKYLW 541
GO:0005634 "nucleus" evidence=ISM
GO:0008219 "cell death" evidence=IMP
GO:0001729 "ceramide kinase activity" evidence=IDA
GO:0006672 "ceramide metabolic process" evidence=IDA
GO:0030264 "nuclear fragmentation involved in apoptotic nuclear change" evidence=IMP
UNIPROTKB|J9NZB9 CERK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q445 CERK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2386052 Cerk "ceramide kinase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TCT0 CERK "Ceramide kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1305019 Cerk "ceramide kinase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NF59 CERK "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070112-2262 zgc:158263 "zgc:158263" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G3N1G9 Bt.97968 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|G3MXL8 Bt.97968 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
PLN02204601 PLN02204, PLN02204, diacylglycerol kinase 0.0
PLN02958481 PLN02958, PLN02958, diacylglycerol kinase/D-erythr 2e-13
PLN02958481 PLN02958, PLN02958, diacylglycerol kinase/D-erythr 2e-11
pfam00781127 pfam00781, DAGK_cat, Diacylglycerol kinase catalyt 2e-10
COG1597301 COG1597, LCB5, Sphingosine kinase and enzymes rela 2e-10
smart00046124 smart00046, DAGKc, Diacylglycerol kinase catalytic 1e-06
TIGR00147293 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/Bm 3e-05
COG1597301 COG1597, LCB5, Sphingosine kinase and enzymes rela 3e-04
PRK13337304 PRK13337, PRK13337, putative lipid kinase; Reviewe 6e-04
>gnl|CDD|215126 PLN02204, PLN02204, diacylglycerol kinase Back     alignment and domain information 
 Score =  702 bits (1813), Expect = 0.0
 Identities = 304/444 (68%), Positives = 349/444 (78%), Gaps = 23/444 (5%)

Query: 1   MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIH 60
           MYRFTVH FQ+S+ +P LWVLAVYTFGHKDL TC+ WV+R+NA LN EVGRPKNLL+F+H
Sbjct: 108 MYRFTVHGFQRSRKEPCLWVLAVYTFGHKDLQTCQSWVDRLNASLNKEVGRPKNLLVFVH 167

Query: 61  PMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGG 120
           P+SGKGSG RTWETV+PIF+RAKV TKVIVT+RAG AFDVMAS  NKEL SYDGV+AVGG
Sbjct: 168 PLSGKGSGSRTWETVSPIFIRAKVKTKVIVTERAGHAFDVMASISNKELKSYDGVIAVGG 227

Query: 121 DGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQD 180
           DGFFNEILNG+L SR K PYPP+P+  VH V +   SS H+ NETV E          +D
Sbjct: 228 DGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDN-------ED 280

Query: 181 QSPLLGSEQYHGSRLPNSN------QDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDP 234
            SPLL             N      QD+DF  P+ERFRFGIIPAGSTDAIV+CTTG RDP
Sbjct: 281 HSPLLSDSVQEVMNFRTENGSCEGDQDSDFPFPNERFRFGIIPAGSTDAIVMCTTGERDP 340

Query: 235 VTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWM 294
           VTSALHI+LG+RVCLDIAQVVRWK T+TS++EP V Y ASF+GYGFYGDVISESEKYRWM
Sbjct: 341 VTSALHIILGRRVCLDIAQVVRWKTTSTSEIEPYVRYAASFAGYGFYGDVISESEKYRWM 400

Query: 295 GPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVIC 354
           GPKRYDYAGTKVFL+HRSYEAE+AYLE ++E + + S      +R +T     K E+++C
Sbjct: 401 GPKRYDYAGTKVFLKHRSYEAEVAYLETESEKSKASSE-----ARKRTG--PKKSEKIVC 453

Query: 355 RRNCNICNTNSVDMSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVV 414
           R NC++CNT    +S+ + S TP   PEE RWLRSKGRFLSVGAAIISNRNERAPDGLV 
Sbjct: 454 RTNCSVCNTK---VSTNSPSTTPNSCPEETRWLRSKGRFLSVGAAIISNRNERAPDGLVA 510

Query: 415 DAHLSDGFMHLILIKDCPRALYLW 438
           DAHLSDGF+HLILIKDCP  LYLW
Sbjct: 511 DAHLSDGFLHLILIKDCPHPLYLW 534

Length = 601
>gnl|CDD|215517 PLN02958, PLN02958, diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>gnl|CDD|215517 PLN02958, PLN02958, diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>gnl|CDD|216116 pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain Back     alignment and domain information
>gnl|CDD|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|214487 smart00046, DAGKc, Diacylglycerol kinase catalytic domain (presumed) Back     alignment and domain information
>gnl|CDD|161732 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/BmrU family Back     alignment and domain information
>gnl|CDD|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|183982 PRK13337, PRK13337, putative lipid kinase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 438
PLN02204601 diacylglycerol kinase 100.0
KOG1115516 consensus Ceramide kinase [Lipid transport and met 100.0
PLN02958481 diacylglycerol kinase/D-erythro-sphingosine kinase 100.0
KOG1116579 consensus Sphingosine kinase, involved in sphingol 100.0
PRK11914306 diacylglycerol kinase; Reviewed 100.0
PRK13059295 putative lipid kinase; Reviewed 100.0
PRK13055334 putative lipid kinase; Reviewed 100.0
PRK13337304 putative lipid kinase; Reviewed 100.0
PRK00861300 putative lipid kinase; Reviewed 100.0
PRK13057287 putative lipid kinase; Reviewed 100.0
TIGR03702293 lip_kinase_YegS lipid kinase YegS. Members of this 100.0
PRK13054300 lipid kinase; Reviewed 100.0
COG1597301 LCB5 Sphingosine kinase and enzymes related to euk 100.0
TIGR00147293 lipid kinase, YegS/Rv2252/BmrU family. The E. coli 100.0
PRK12361547 hypothetical protein; Provisional 100.0
PF00781130 DAGK_cat: Diacylglycerol kinase catalytic domain; 99.94
smart00046124 DAGKc Diacylglycerol kinase catalytic domain (pres 99.86
KOG4435 535 consensus Predicted lipid kinase [Lipid transport 99.83
KOG1169634 consensus Diacylglycerol kinase [Lipid transport a 99.65
KOG0782 1004 consensus Predicted diacylglycerol kinase [Signal 99.65
smart00045160 DAGKa Diacylglycerol kinase accessory domain (pres 98.92
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.84
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 98.76
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 98.12
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.99
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.93
KOG1170 1099 consensus Diacylglycerol kinase [Lipid transport a 97.62
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 97.43
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 97.38
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 97.3
PF00609161 DAGK_acc: Diacylglycerol kinase accessory domain; 97.13
PRK14076569 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 96.95
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.79
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.74
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 96.7
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.44
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 96.4
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 96.24
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 95.87
PLN02727986 NAD kinase 95.23
PLN02929301 NADH kinase 95.2
PRK01185271 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 94.89
PF11711382 Tim54: Inner membrane protein import complex subun 94.69
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 94.29
cd08194375 Fe-ADH6 Iron-containing alcohol dehydrogenases-lik 93.7
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 93.5
PF13685250 Fe-ADH_2: Iron-containing alcohol dehydrogenase; P 93.03
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 93.02
cd08171345 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol 92.83
cd08174331 G1PDH-like Glycerol-1-phosphate dehydrogenase-like 92.79
cd08170351 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox 92.52
cd08197355 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly 92.44
PRK00002358 aroB 3-dehydroquinate synthase; Reviewed 92.4
KOG2178409 consensus Predicted sugar kinase [Carbohydrate tra 92.17
TIGR01357344 aroB 3-dehydroquinate synthase. This model represe 92.02
PRK09423366 gldA glycerol dehydrogenase; Provisional 91.62
COG0061281 nadF NAD kinase [Coenzyme metabolism] 91.43
cd08549332 G1PDH_related Glycerol-1-phosphate_dehydrogenase a 91.28
cd08550349 GlyDH-like Glycerol_dehydrogenase-like. Families o 91.06
cd07766332 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) 90.52
cd08172347 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol 89.85
KOG4180395 consensus Predicted kinase [General function predi 89.48
PRK02231272 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.46
cd08175348 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) c 89.35
cd08173339 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro 88.76
cd08169344 DHQ-like Dehydroquinate synthase-like which includ 88.73
cd08183374 Fe-ADH2 Iron-containing alcohol dehydrogenases-lik 87.84
PF10254414 Pacs-1: PACS-1 cytosolic sorting protein; InterPro 87.72
cd08199354 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi- 87.29
cd08191386 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyz 87.17
PRK00843350 egsA NAD(P)-dependent glycerol-1-phosphate dehydro 87.11
PRK14021542 bifunctional shikimate kinase/3-dehydroquinate syn 86.42
COG1454377 EutG Alcohol dehydrogenase, class IV [Energy produ 86.03
cd08181357 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 85.64
PRK15454395 ethanol dehydrogenase EutG; Provisional 85.36
PLN02834433 3-dehydroquinate synthase 84.89
PRK10586362 putative oxidoreductase; Provisional 84.45
cd08177337 MAR Maleylacetate reductase is involved in many ar 83.24
cd08189374 Fe-ADH5 Iron-containing alcohol dehydrogenases-lik 83.09
PF00465366 Fe-ADH: Iron-containing alcohol dehydrogenase ; In 82.98
cd08185380 Fe-ADH1 Iron-containing alcohol dehydrogenases-lik 82.96
cd08195345 DHQS Dehydroquinate synthase (DHQS) catalyzes the 82.94
cd08187382 BDH Butanol dehydrogenase catalyzes the conversion 82.35
cd08186383 Fe-ADH8 Iron-containing alcohol dehydrogenase. Typ 82.07
cd08179375 NADPH_BDH NADPH-dependent butanol dehydrogenase in 82.06
PRK10624382 L-1,2-propanediol oxidoreductase; Provisional 82.04
cd08192370 Fe-ADH7 Iron-containing alcohol dehydrogenases-lik 81.97
cd08551370 Fe-ADH iron-containing alcohol dehydrogenases (Fe- 81.33
TIGR02638379 lactal_redase lactaldehyde reductase. This clade o 81.32
cd08193376 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyze 80.92
cd08188377 Fe-ADH4 Iron-containing alcohol dehydrogenases-lik 80.65
>PLN02204 diacylglycerol kinase Back     alignment and domain information 
Probab=100.00  E-value=4.1e-79  Score=643.89  Aligned_cols=420  Identities=72%  Similarity=1.211  Sum_probs=356.6

Q ss_pred             CeeEEEEEEecCCCCCCceEEEEEeecCCChHHHHHHHHHHHHHhhhccCCCcEEEEEEcCCCCCCChhhhHHHHHHHHH
Q 037501            1 MYRFTVHSFQKSKTQPNLWVLAVYTFGHKDLPTCEMWVNRVNAFLNMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFV   80 (438)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~w~~~~~~f~~~~~~~~~~w~~~l~~~~~~~~~rpk~llvivNP~sG~g~~~~~~~~v~~~l~   80 (438)
                      ||||+||+|+|+|++|++|++..|+|.++|...|+.|+++|+++++.+..|||+++|||||.||+|++.++|++|.|+|+
T Consensus       108 ~~~f~v~~~~~~~~~~~~w~~~~~~f~~~d~~~~~~w~~~l~~~l~~~~~r~k~llVivNP~sGkg~~~~~~~~V~p~f~  187 (601)
T PLN02204        108 MYRFTVHGFQRSRKEPCLWVLAVYTFGHKDLQTCQSWVDRLNASLNKEVGRPKNLLVFVHPLSGKGSGSRTWETVSPIFI  187 (601)
T ss_pred             ceeeEEEEeeecccCCCcceeEEEeecCCCHHHHHHHHHHHHHHHhhccCCCceEEEEECCCCCCcchHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             hcceeEEEEEeCCCChHHHHHHHhhhhhcCCCcEEEEEcCCchHHHHHHhhhhcccCCCCCCCCCCccCCCCCCCCCCCC
Q 037501           81 RAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDH  160 (438)
Q Consensus        81 ~agi~~~v~~T~~~~ha~~~~~~~~~~~~~~~d~IV~vGGDGTv~EVvNGL~~~~~~~~~~~~p~g~~~~g~~n~~~~~~  160 (438)
                      ++++++++++|++++||+++++++.+.++.+||+|||||||||||||+|||+.++++.++|+-|.++...-..+......
T Consensus       188 ~a~i~~~v~~T~~aghA~d~~~~~~~~~l~~~D~VVaVGGDGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~  267 (601)
T PLN02204        188 RAKVKTKVIVTERAGHAFDVMASISNKELKSYDGVIAVGGDGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVH  267 (601)
T ss_pred             HcCCeEEEEEecCcchHHHHHHHHhhhhccCCCEEEEEcCccHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence            99999999999999999999988765557899999999999999999999997766667777776555543333333444


Q ss_pred             ccccccccCCcCCccCccCCCCccccccccCCCCCC------CCCCCCCCCCCCCCceEEEecCCChhHHHHHcCCCCCH
Q 037501          161 DLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLP------NSNQDTDFRIPSERFRFGIIPAGSTDAIVICTTGARDP  234 (438)
Q Consensus       161 ~~~~~~~g~~~~~~~~~~~d~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~lGiIP~GSgN~~A~sl~g~~d~  234 (438)
                      +++++..+       ..++|++|+|+++.+....+.      ++++++.+.++..+++|||||+||||+||+++.+++|+
T Consensus       268 ~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGIIPaGSgN~~a~~~~g~~dp  340 (601)
T PLN02204        268 EPNETVHE-------CDNEDHSPLLSDSVQEVMNFRTENGSCEGDQDSDFPFPNERFRFGIIPAGSTDAIVMCTTGERDP  340 (601)
T ss_pred             cccccccc-------ccccccccccccccccccccccccccccccccccccccCCCceEEEECCccHHHHHHHccCCCCH
Confidence            45544432       346788888877766443333      67888888889999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeEEeeEEEEeccccccccCCCCceeEEEEeeeccchhhhhhhhhhhcccCchHHHHHHHHHHHhCCceE
Q 037501          235 VTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLRHRSYE  314 (438)
Q Consensus       235 ~~aa~~i~~g~~~~lDv~~v~~~~~~~~~~~~~~~ryf~~~~~~G~~adV~~~se~~r~lG~~rY~~~~~~~l~~~~~y~  314 (438)
                      .+||++|+.|+.++||+++|++|+....++..+..|||+|++|+||+|+|++++|++||||++||++++++.|+++++|+
T Consensus       341 ~taa~~Ii~G~~~~lDig~V~~~~~~~~~~~~~~~ryf~s~ag~Gf~gdVi~esek~R~mG~~rY~~~g~k~~~~~r~y~  420 (601)
T PLN02204        341 VTSALHIILGRRVCLDIAQVVRWKTTSTSEIEPYVRYAASFAGYGFYGDVISESEKYRWMGPKRYDYAGTKVFLKHRSYE  420 (601)
T ss_pred             HHHHHHHHhCCCeEeeEEEEecccccccccccccceEEEEEeecchHHHHHHHhhhhcccchHHHHHHHHHHHHhCCCce
Confidence            99999999999999999999987654444445667999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeccccccccccCCCCCcccccccccC-CCccccceecccccccCCCCCCCCCCcCCCCCCCCCCCCceEEEeccE
Q 037501          315 AEIAYLEVDAEHTNSVSNKGYSCSRAQTFRN-SNKCERVICRRNCNICNTNSVDMSSTATSRTPYFRPEEARWLRSKGRF  393 (438)
Q Consensus       315 ~~I~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~c~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~f  393 (438)
                      ++|++++.+........        .++.+. +...+...|+.+|.+|+.....   .+++..|+......+|+++.|.|
T Consensus       421 ~~V~~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~c~~~c~Vcn~~~~~---~~~~~~p~~~~~~~~W~~~~G~f  489 (601)
T PLN02204        421 AEVAYLETESEKSKASS--------EARKRTGPKKSEKIVCRTNCSVCNTKVST---NSPSTTPNSCPEETRWLRSKGRF  489 (601)
T ss_pred             EEEEECCeEeeeccccc--------ccccccccccccchhhhhheeeecccccc---cccccccccccccccceeecCce
Confidence            99999987643221100        011122 3445678899999999976321   12334455566778999999999


Q ss_pred             EEEEEeecCCcCCCCCCCcCccCccCCCeEEEEEEcCCCccccCC
Q 037501          394 LSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYLW  438 (438)
Q Consensus       394 ~~v~~~n~s~~~~~ap~~l~P~A~l~DG~ldlvlvr~~s~~~~l~  438 (438)
                      +++++++++|+|.+||++|+|+||++||+|||++|++|+++.|||
T Consensus       490 ~~vG~~iis~~~~rap~gl~pdA~l~DG~LDLilVr~~s~~~~L~  534 (601)
T PLN02204        490 LSVGAAIISNRNERAPDGLVADAHLSDGFLHLILIKDCPHPLYLW  534 (601)
T ss_pred             EEeeeecccccccccccccCCCCcCCCCeEEEEEECCCCHHHHHH
Confidence            999999999999999999999999999999999999999998875

>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK13059 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK00861 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13057 putative lipid kinase; Reviewed Back     alignment and domain information
>TIGR03702 lip_kinase_YegS lipid kinase YegS Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] Back     alignment and domain information
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family Back     alignment and domain information
>PRK12361 hypothetical protein; Provisional Back     alignment and domain information
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ] Back     alignment and domain information
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed) Back     alignment and domain information
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed) Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism] Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02727 NAD kinase Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF11711 Tim54: Inner membrane protein import complex subunit Tim54; InterPro: IPR021056 Mitochondrial function depends on the import of hundreds of different proteins synthesised in the cytosol Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like Back     alignment and domain information
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like Back     alignment and domain information
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation Back     alignment and domain information
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics Back     alignment and domain information
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed Back     alignment and domain information
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01357 aroB 3-dehydroquinate synthase Back     alignment and domain information
>PRK09423 gldA glycerol dehydrogenase; Provisional Back     alignment and domain information
>COG0061 nadF NAD kinase [Coenzyme metabolism] Back     alignment and domain information
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins Back     alignment and domain information
>cd08550 GlyDH-like Glycerol_dehydrogenase-like Back     alignment and domain information
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH) Back     alignment and domain information
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like Back     alignment and domain information
>KOG4180 consensus Predicted kinase [General function prediction only] Back     alignment and domain information
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner Back     alignment and domain information
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme Back     alignment and domain information
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase Back     alignment and domain information
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system Back     alignment and domain information
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS) Back     alignment and domain information
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate Back     alignment and domain information
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional Back     alignment and domain information
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion] Back     alignment and domain information
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD) Back     alignment and domain information
>PRK15454 ethanol dehydrogenase EutG; Provisional Back     alignment and domain information
>PLN02834 3-dehydroquinate synthase Back     alignment and domain information
>PRK10586 putative oxidoreductase; Provisional Back     alignment and domain information
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes Back     alignment and domain information
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 Back     alignment and domain information
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis Back     alignment and domain information
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process Back     alignment and domain information
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase Back     alignment and domain information
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria Back     alignment and domain information
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional Back     alignment and domain information
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway Back     alignment and domain information
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like Back     alignment and domain information
>TIGR02638 lactal_redase lactaldehyde reductase Back     alignment and domain information
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor Back     alignment and domain information
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 7e-16
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 2e-05
2qv7_A337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 8e-14
2qv7_A337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 9e-06
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 3e-08
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 2e-04
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304 Back     alignment and structure
 Score = 77.0 bits (190), Expect = 7e-16
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 12/111 (10%)

Query: 46  NMEVGRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTK 105
           +M   + + +L+ ++P +G+G        + P    A  +  ++ T+  G A        
Sbjct: 2   HMTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFA 61

Query: 106 NKELSSYDGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVG--ND 154
           +K     D ++  GGDG   E  NG      +          + P G  ND
Sbjct: 62  SK----VDLIIVFGGDGTVFECTNGLAPLEIRPTL-----AII-PGGTCND 102
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304 Back     alignment and structure
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337 Back     alignment and structure
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337 Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332 Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
3s40_A304 Diacylglycerol kinase; structural genomics, the ce 100.0
2qv7_A337 Diacylglycerol kinase DGKB; alpha-beta domain 1, b 100.0
2bon_A332 Lipid kinase; DAG kinase, transferase; 1.90A {Esch 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 99.37
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 99.13
1u0t_A307 Inorganic polyphosphate/ATP-NAD kinase; alpha-beta 98.92
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 98.82
3afo_A388 NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi 97.91
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 96.16
3pfn_A365 NAD kinase; structural genomics consortium, SNP, S 94.21
3qbe_A368 3-dehydroquinate synthase; shikimate pathway, myco 91.97
3okf_A390 3-dehydroquinate synthase; structural genomics, ce 91.54
3uhj_A387 Probable glycerol dehydrogenase; structural genomi 91.43
3jzd_A358 Iron-containing alcohol dehydrogenase; YP_298327.1 89.66
1jq5_A370 Glycerol dehydrogenase; oxidoreductase, NAD, glyce 89.55
3ce9_A354 Glycerol dehydrogenase; NP_348253.1, 3-dehydroquin 89.42
1sg6_A393 Pentafunctional AROM polypeptide; shikimate pathwa 88.66
3hl0_A353 Maleylacetate reductase; structur genomics, PSI-2, 87.94
1ta9_A450 Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosa 85.53
2gru_A368 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2 82.68
1qtn_A164 Caspase-8; apoptosis, dithiane-DIOL, caspase, cyst 81.66
1pyo_A167 Caspase-2; apoptosis, caspase, alpha-beta, thiol p 81.16
2ql9_A173 Caspase-7; cysteine protease, apoptosis, thiol pro 80.93
3n7t_A247 Macrophage binding protein; seattle structural gen 80.58
1o2d_A371 Alcohol dehydrogenase, iron-containing; TM0920, st 80.29
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Back     alignment and structure
Probab=100.00  E-value=1.8e-44  Score=358.66  Aligned_cols=228  Identities=18%  Similarity=0.239  Sum_probs=187.8

Q ss_pred             CCCcEEEEEEcCCCCCCChhhhHHHHHHHHHhcceeEEEEEeCCCChHHHHHHHhhhhhcCCCcEEEEEcCCchHHHHHH
Q 037501           50 GRPKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILN  129 (438)
Q Consensus        50 ~rpk~llvivNP~sG~g~~~~~~~~v~~~l~~agi~~~v~~T~~~~ha~~~~~~~~~~~~~~~d~IV~vGGDGTv~EVvN  129 (438)
                      ..+|+++||+||.||++++.+.|+++++.|++++++++++.|++++||.++++++.    +++|.||++|||||+|||+|
T Consensus         6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~----~~~d~vv~~GGDGTl~~v~~   81 (304)
T 3s40_A            6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFA----SKVDLIIVFGGDGTVFECTN   81 (304)
T ss_dssp             CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHT----TTCSEEEEEECHHHHHHHHH
T ss_pred             CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhh----cCCCEEEEEccchHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999998873    47999999999999999999


Q ss_pred             hhhhcccCCCCCCCCCCccCCCCCCCCCCCCccccccccCCcCCccCccCCCCccccccccCCCCCCCCCCCCCCCCCCC
Q 037501          130 GFLSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSE  209 (438)
Q Consensus       130 GL~~~~~~~~~~~~p~g~~~~g~~n~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  209 (438)
                      +|+.+.                                                                         .
T Consensus        82 ~l~~~~-------------------------------------------------------------------------~   88 (304)
T 3s40_A           82 GLAPLE-------------------------------------------------------------------------I   88 (304)
T ss_dssp             HHTTCS-------------------------------------------------------------------------S
T ss_pred             HHhhCC-------------------------------------------------------------------------C
Confidence            998641                                                                         2


Q ss_pred             CceEEEecCCChhHHHHHcCCCCCHHHHHHHHHcCCeEEeeEEEEeccccccccCCCCceeEEEEeeeccchhhhhhhh-
Q 037501          210 RFRFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISES-  288 (438)
Q Consensus       210 ~~~lGiIP~GSgN~~A~sl~g~~d~~~aa~~i~~g~~~~lDv~~v~~~~~~~~~~~~~~~ryf~~~~~~G~~adV~~~s-  288 (438)
                      .+|||+||+||+|+||++|+.+.|+.+|+..|+.|+++++|++++++             +||+|++|+||+|+|+.+. 
T Consensus        89 ~~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~g~~~~iDlg~v~~-------------~~F~~~~~~G~da~v~~~~~  155 (304)
T 3s40_A           89 RPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITKEHVKPVDVAKANG-------------QHFLNFWGIGLVSEVSNNID  155 (304)
T ss_dssp             CCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTTCCEEEEEEEEETT-------------EEESSEEEEC----------
T ss_pred             CCcEEEecCCcHHHHHHHcCCCccHHHHHHHHHhCCeEEEEEEEECC-------------EEEEEEEeehHHHHHHHhcC
Confidence            57999999999999999999999999999999999999999999974             8999999999999999875 


Q ss_pred             -hhhcccCchHHHHHHHHHHHhCCceEEEEEEeccccccccccCCCCCcccccccccCCCccccceecccccccCCCCCC
Q 037501          289 -EKYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVD  367 (438)
Q Consensus       289 -e~~r~lG~~rY~~~~~~~l~~~~~y~~~I~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~c~~~c~~c~~~~~~  367 (438)
                       +.++++|+++|.+++++.|+++++|+++|++++..                                            
T Consensus       156 ~~~k~~~G~~~Y~~~~l~~l~~~~~~~~~i~~dg~~--------------------------------------------  191 (304)
T 3s40_A          156 AEEKAKLGKIGYYLSTIRTVKNAETFPVKITYDGQV--------------------------------------------  191 (304)
T ss_dssp             --------CHHHHTTTC------CCEEEEEEETTEE--------------------------------------------
T ss_pred             HHHhhcCCchHHHHHHHHHHhhcCCceEEEEECCEE--------------------------------------------
Confidence             45678999999999999999999999999885421                                            


Q ss_pred             CCCCcCCCCCCCCCCCCceEEEeccEEEEEEeecCCcCCCCCCCcCccCccCCCeEEEEEEcCCCcc
Q 037501          368 MSSTATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRA  434 (438)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~W~~~~g~f~~v~~~n~s~~~~~ap~~l~P~A~l~DG~ldlvlvr~~s~~  434 (438)
                                           +++++.++.++|.+++|+..  .++|.|.++||.|||+++++.++.
T Consensus       192 ---------------------~~~~~~~v~v~N~~~~Ggg~--~~~p~a~~~DG~Ldv~~v~~~~~~  235 (304)
T 3s40_A          192 ---------------------YEDEAVLVMVGNGEYLGGIP--SFIPNVKCDDGTLDIFVVKSTGIQ  235 (304)
T ss_dssp             ---------------------EEEEEEEEEEECSSEETTEE--CSSTTCCTTSSCEEEEEEETTCHH
T ss_pred             ---------------------EEeEEEEEEEECCCcCCCCc--ccCCCCcCCCCEEEEEEEccCCHH
Confidence                                 36788999999999999753  388999999999999999999864
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Back     alignment and structure
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens} Back     alignment and structure
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A Back     alignment and structure
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor} Back     alignment and structure
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti} Back     alignment and structure
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha} Back     alignment and structure
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A* Back     alignment and structure
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A* Back     alignment and structure
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str} Back     alignment and structure
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe} Back     alignment and structure
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A* Back     alignment and structure
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A* Back     alignment and structure
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A Back     alignment and structure
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A Back     alignment and structure
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 Back     alignment and structure
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 438
d2qv7a1312 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta 2e-13
d2bona1295 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia 4e-07
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

 Score = 68.5 bits (166), Expect = 2e-13
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 7/108 (6%)

Query: 53  KNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSY 112
           K   I  +P SGK   +R          +A   T    T++ G A       +     +Y
Sbjct: 3   KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEA---ERAMHENY 59

Query: 113 DGVLAVGGDGFFNEILNGFLSSRYKAPYPPAPAGFVHPVGNDHCSSDH 160
           D ++A GGDG  NE++NG      +      P        ND   + H
Sbjct: 60  DVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM----GTVNDFGRALH 103
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 100.0
d2bona1295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 100.0
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 97.24
d1vlja_398 NADH-dependent butanol dehydrogenase A (TM0820) {T 95.47
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 94.77
d1jq5a_366 Glycerol dehydrogenase {Bacillus stearothermophilu 91.32
d1kq3a_364 Glycerol dehydrogenase {Thermotoga maritima [TaxId 90.3
d1v89a_118 Rho-GTPase-activating protein 25 (KIAA0053) {Human 88.32
d1o2da_359 Alcohol dehydrogenase TM0920 {Thermotoga maritima 83.14
d1qvwa_236 Hypothetical protein Ydr533Cp {Baker's yeast (Sacc 82.97
d1vhqa_217 Putative sigma cross-reacting protein 27A (SCRP-27 80.13
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.9e-42  Score=341.23  Aligned_cols=230  Identities=24%  Similarity=0.316  Sum_probs=199.6

Q ss_pred             CcEEEEEEcCCCCCCChhhhHHHHHHHHHhcceeEEEEEeCCCChHHHHHHHhhhhhcCCCcEEEEEcCCchHHHHHHhh
Q 037501           52 PKNLLIFIHPMSGKGSGRRTWETVAPIFVRAKVNTKVIVTQRAGQAFDVMASTKNKELSSYDGVLAVGGDGFFNEILNGF  131 (438)
Q Consensus        52 pk~llvivNP~sG~g~~~~~~~~v~~~l~~agi~~~v~~T~~~~ha~~~~~~~~~~~~~~~d~IV~vGGDGTv~EVvNGL  131 (438)
                      .||++||+||+||++++.+.|+++.+.|..++++++++.|++++|+.++++++.   .+++|.||++|||||||||+|||
T Consensus         2 ~kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~---~~~~d~ivv~GGDGTv~~v~~~l   78 (312)
T d2qv7a1           2 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAM---HENYDVLIAAGGDGTLNEVVNGI   78 (312)
T ss_dssp             CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHT---TTTCSEEEEEECHHHHHHHHHHH
T ss_pred             CceEEEEECcCCCCCcHHHHHHHHHHHHHHCCCeEEEEEcCCccHHHHHHHHHH---HcCCCEEEEEcCCcHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999999998874   36799999999999999999999


Q ss_pred             hhcccCCCCCCCCCCccCCCCCCCCCCCCccccccccCCcCCccCccCCCCccccccccCCCCCCCCCCCCCCCCCCCCc
Q 037501          132 LSSRYKAPYPPAPAGFVHPVGNDHCSSDHDLNETVTETSQHDEDQSHQDQSPLLGSEQYHGSRLPNSNQDTDFRIPSERF  211 (438)
Q Consensus       132 ~~~~~~~~~~~~p~g~~~~g~~n~~~~~~~~~~~~~g~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (438)
                      +.+.                                                                         .++
T Consensus        79 ~~~~-------------------------------------------------------------------------~~~   85 (312)
T d2qv7a1          79 AEKP-------------------------------------------------------------------------NRP   85 (312)
T ss_dssp             TTCS-------------------------------------------------------------------------SCC
T ss_pred             Hhhc-------------------------------------------------------------------------ccc
Confidence            8652                                                                         257


Q ss_pred             eEEEecCCChhHHHHHcCCCCCHHHHHHHHHcCCeEEeeEEEEeccccccccCCCCceeEEEEeeeccchhhhhhhhh--
Q 037501          212 RFGIIPAGSTDAIVICTTGARDPVTSALHIVLGKRVCLDIAQVVRWKATATSKVEPLVHYTASFSGYGFYGDVISESE--  289 (438)
Q Consensus       212 ~lGiIP~GSgN~~A~sl~g~~d~~~aa~~i~~g~~~~lDv~~v~~~~~~~~~~~~~~~ryf~~~~~~G~~adV~~~se--  289 (438)
                      ||||||+||||+||++|+.+.++.+++..+..|..+++|++.++.             +||++++++||+++++.+.+  
T Consensus        86 ~l~iiP~GTgN~~ar~l~~~~~~~~al~~~~~~~~~~id~~~v~~-------------~~f~~~~~~G~~a~~~~~~~~~  152 (312)
T d2qv7a1          86 KLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNN-------------RYFINLAAGGQLTQVSYETPSK  152 (312)
T ss_dssp             EEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEEEEEETT-------------EEESSEEEEECBCC--------
T ss_pred             ceEEeecCCCCcchhhccccchHHHHHHhhhcCCcEEecccccCc-------------cceeeeeeeehhhHHHHHHHHh
Confidence            899999999999999999999999999999999999999999975             89999999999999988764  


Q ss_pred             hhcccCchHHHHHHHHHHHhCCceEEEEEEeccccccccccCCCCCcccccccccCCCccccceecccccccCCCCCCCC
Q 037501          290 KYRWMGPKRYDYAGTKVFLRHRSYEAEIAYLEVDAEHTNSVSNKGYSCSRAQTFRNSNKCERVICRRNCNICNTNSVDMS  369 (438)
Q Consensus       290 ~~r~lG~~rY~~~~~~~l~~~~~y~~~I~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~c~~~c~~c~~~~~~~~  369 (438)
                      .++++|.++|.+++++.|++.++++++|++++.                                               
T Consensus       153 ~~~~~~~~~y~~~~~~~l~~~~~~~~~i~~dg~-----------------------------------------------  185 (312)
T d2qv7a1         153 LKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGN-----------------------------------------------  185 (312)
T ss_dssp             -----CGGGSCCCTTTTGGGBCCEEEEEEETTE-----------------------------------------------
T ss_pred             hhccccchHHHHHHHHHhhccCceEEEeecCCc-----------------------------------------------
Confidence            455679999999999999999999999988643                                               


Q ss_pred             CCcCCCCCCCCCCCCceEEEeccEEEEEEeecCCcCCCCCCCcCccCccCCCeEEEEEEcCCCccccC
Q 037501          370 STATSRTPYFRPEEARWLRSKGRFLSVGAAIISNRNERAPDGLVVDAHLSDGFMHLILIKDCPRALYL  437 (438)
Q Consensus       370 ~~~~~~~~~~~~~~~~W~~~~g~f~~v~~~n~s~~~~~ap~~l~P~A~l~DG~ldlvlvr~~s~~~~l  437 (438)
                                        +++++++++.++|.++.+..  ..++|.|.++||.||+++++..++++++
T Consensus       186 ------------------~~~~~~~~~~v~n~~~~ggg--~~i~p~a~~~DG~l~v~~~~~~~~~~l~  233 (312)
T d2qv7a1         186 ------------------VFQGEALLFFLGLTNSMAGF--EKLVPDAKLDDGYFTLIIVEKSNLAELG  233 (312)
T ss_dssp             ------------------EEEEEEEEEEEESSCCCSSC--SCSSTTCCSSSSCEEEEEEECCCHHHHH
T ss_pred             ------------------ceecceeeeeeecccccCCC--CccCCccccccCcceEEEEcCCCHHHHH
Confidence                              13778889999999999875  4589999999999999999999987654
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure